Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439230 | XP_013447468.1 | 97.176 | 425 | 11 | 1 | 1 | 425 | 1 | 424 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439230 | sp|Q9M884|MPI1_ARATH | 60.539 | 408 | 158 | 3 | 15 | 422 | 25 | 429 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439230 | A0A072TVL2 | 97.176 | 425 | 11 | 1 | 1 | 425 | 1 | 424 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0439230 | 0.814584 | 1.430358e-51 | -8.615850e-47 |
| Msa0003270 | Msa0439230 | 0.800347 | 1.504142e-48 | -8.615850e-47 |
| Msa0004540 | Msa0439230 | 0.830757 | 2.452884e-55 | -8.615850e-47 |
| Msa0014830 | Msa0439230 | 0.843058 | 1.769859e-58 | -8.615850e-47 |
| Msa0029260 | Msa0439230 | 0.832652 | 8.365896e-56 | -8.615850e-47 |
| Msa0029630 | Msa0439230 | 0.811009 | 8.671947e-51 | -8.615850e-47 |
| Msa0032260 | Msa0439230 | 0.816635 | 4.996477e-52 | -8.615850e-47 |
| Msa0033880 | Msa0439230 | 0.862422 | 5.126251e-64 | -8.615850e-47 |
| Msa0038000 | Msa0439230 | 0.803018 | 4.258200e-49 | -8.615850e-47 |
| Msa0041690 | Msa0439230 | 0.837712 | 4.420147e-57 | -8.615850e-47 |
| Msa0047160 | Msa0439230 | 0.803682 | 3.102519e-49 | -8.615850e-47 |
| Msa0047250 | Msa0439230 | 0.800080 | 1.704557e-48 | -8.615850e-47 |
| Msa0048180 | Msa0439230 | 0.822778 | 1.974698e-53 | -8.615850e-47 |
| Msa0055100 | Msa0439230 | 0.808082 | 3.687506e-50 | -8.615850e-47 |
| Msa0074750 | Msa0439230 | 0.833045 | 6.681672e-56 | -8.615850e-47 |
| Msa0076040 | Msa0439230 | 0.838108 | 3.498171e-57 | -8.615850e-47 |
| Msa0077540 | Msa0439230 | 0.806781 | 6.961238e-50 | -8.615850e-47 |
| Msa0079920 | Msa0439230 | 0.811591 | 6.485237e-51 | -8.615850e-47 |
| Msa0081650 | Msa0439230 | 0.817137 | 3.854711e-52 | -8.615850e-47 |
| Msa0090030 | Msa0439230 | 0.809075 | 2.263628e-50 | -8.615850e-47 |
| Msa0091610 | Msa0439230 | 0.804682 | 1.921365e-49 | -8.615850e-47 |
| Msa0092170 | Msa0439230 | 0.823308 | 1.485136e-53 | -8.615850e-47 |
| Msa0097950 | Msa0439230 | 0.814785 | 1.290672e-51 | -8.615850e-47 |
| Msa0101180 | Msa0439230 | 0.803157 | 3.986327e-49 | -8.615850e-47 |
| Msa0103240 | Msa0439230 | 0.801770 | 7.697342e-49 | -8.615850e-47 |
| Msa0115370 | Msa0439230 | 0.820964 | 5.192078e-53 | -8.615850e-47 |
| Msa0125450 | Msa0439230 | 0.804706 | 1.899392e-49 | -8.615850e-47 |
| Msa0125540 | Msa0439230 | 0.806978 | 6.326268e-50 | -8.615850e-47 |
| Msa0126520 | Msa0439230 | 0.807864 | 4.104025e-50 | -8.615850e-47 |
| Msa0127040 | Msa0439230 | 0.839692 | 1.360772e-57 | -8.615850e-47 |
| Msa0127850 | Msa0439230 | 0.863127 | 3.106991e-64 | -8.615850e-47 |
| Msa0128860 | Msa0439230 | 0.822008 | 2.980645e-53 | -8.615850e-47 |
| Msa0130240 | Msa0439230 | 0.813759 | 2.174899e-51 | -8.615850e-47 |
| Msa0131450 | Msa0439230 | 0.806205 | 9.212242e-50 | -8.615850e-47 |
| Msa0136120 | Msa0439230 | 0.827303 | 1.685432e-54 | -8.615850e-47 |
| Msa0140300 | Msa0439230 | 0.800915 | 1.151993e-48 | -8.615850e-47 |
| Msa0147980 | Msa0439230 | 0.802823 | 4.672641e-49 | -8.615850e-47 |
| Msa0165950 | Msa0439230 | 0.817390 | 3.380502e-52 | -8.615850e-47 |
| Msa0166750 | Msa0439230 | 0.830240 | 3.282645e-55 | -8.615850e-47 |
| Msa0167480 | Msa0439230 | 0.810244 | 1.269485e-50 | -8.615850e-47 |
| Msa0169300 | Msa0439230 | 0.829500 | 4.973342e-55 | -8.615850e-47 |
| Msa0174000 | Msa0439230 | 0.866742 | 2.282867e-65 | -8.615850e-47 |
| Msa0174730 | Msa0439230 | 0.820711 | 5.936987e-53 | -8.615850e-47 |
| Msa0174770 | Msa0439230 | 0.811891 | 5.579868e-51 | -8.615850e-47 |
| Msa0181610 | Msa0439230 | 0.835119 | 2.019900e-56 | -8.615850e-47 |
| Msa0193600 | Msa0439230 | 0.800591 | 1.341239e-48 | -8.615850e-47 |
| Msa0194540 | Msa0439230 | 0.800800 | 1.215864e-48 | -8.615850e-47 |
| Msa0198520 | Msa0439230 | 0.805020 | 1.633169e-49 | -8.615850e-47 |
| Msa0198530 | Msa0439230 | 0.814636 | 1.392808e-51 | -8.615850e-47 |
| Msa0199690 | Msa0439230 | 0.813089 | 3.053431e-51 | -8.615850e-47 |
| Msa0229940 | Msa0439230 | 0.801395 | 9.189632e-49 | -8.615850e-47 |
| Msa0231100 | Msa0439230 | 0.808654 | 2.784733e-50 | -8.615850e-47 |
| Msa0231790 | Msa0439230 | 0.805384 | 1.370258e-49 | -8.615850e-47 |
| Msa0370160 | Msa0439230 | -0.830850 | 2.328387e-55 | -8.615850e-47 |
| Msa0376280 | Msa0439230 | 0.821925 | 3.115145e-53 | -8.615850e-47 |
| Msa0384670 | Msa0439230 | 0.811639 | 6.330514e-51 | -8.615850e-47 |
| Msa0384880 | Msa0439230 | 0.802590 | 5.219711e-49 | -8.615850e-47 |
| Msa0402820 | Msa0439230 | 0.809012 | 2.334414e-50 | -8.615850e-47 |
| Msa0405650 | Msa0439230 | 0.823775 | 1.155069e-53 | -8.615850e-47 |
| Msa0428170 | Msa0439230 | 0.800441 | 1.438968e-48 | -8.615850e-47 |
| Msa0432070 | Msa0439230 | 0.819999 | 8.644555e-53 | -8.615850e-47 |
| Msa0434570 | Msa0439230 | 0.815875 | 7.389140e-52 | -8.615850e-47 |
| Msa0434770 | Msa0439230 | 0.816620 | 5.033740e-52 | -8.615850e-47 |
| Msa0436200 | Msa0439230 | 0.807021 | 6.195665e-50 | -8.615850e-47 |
| Msa0437690 | Msa0439230 | -0.812050 | 5.152856e-51 | -8.615850e-47 |
| Msa0439230 | Msa0439890 | 0.811016 | 8.644748e-51 | -8.615850e-47 |
| Msa0439230 | Msa0443390 | 0.812378 | 4.368396e-51 | -8.615850e-47 |
| Msa0439230 | Msa0462880 | 0.802523 | 5.387783e-49 | -8.615850e-47 |
| Msa0439230 | Msa0470530 | 0.811528 | 6.691623e-51 | -8.615850e-47 |
| Msa0439230 | Msa0478580 | 0.826017 | 3.417054e-54 | -8.615850e-47 |
| Msa0439230 | Msa0479330 | 0.824546 | 7.612324e-54 | -8.615850e-47 |
| Msa0439230 | Msa0484290 | 0.812111 | 4.995661e-51 | -8.615850e-47 |
| Msa0439230 | Msa0484740 | 0.813253 | 2.811338e-51 | -8.615850e-47 |
| Msa0439230 | Msa0498560 | 0.818808 | 1.615239e-52 | -8.615850e-47 |
| Msa0439230 | Msa0505380 | 0.801602 | 8.332606e-49 | -8.615850e-47 |
| Msa0439230 | Msa0509950 | -0.811004 | 8.693766e-51 | -8.615850e-47 |
| Msa0439230 | Msa0510290 | 0.804314 | 2.292411e-49 | -8.615850e-47 |
| Msa0439230 | Msa0511770 | 0.800611 | 1.328765e-48 | -8.615850e-47 |
| Msa0439230 | Msa0516120 | 0.821039 | 4.990836e-53 | -8.615850e-47 |
| Msa0439230 | Msa0524590 | 0.811428 | 7.037525e-51 | -8.615850e-47 |
| Msa0439230 | Msa0526540 | 0.810867 | 9.309680e-51 | -8.615850e-47 |
| Msa0439230 | Msa0527150 | 0.825431 | 4.704682e-54 | -8.615850e-47 |
| Msa0439230 | Msa0531250 | 0.827391 | 1.605389e-54 | -8.615850e-47 |
| Msa0439230 | Msa0534790 | 0.802341 | 5.873370e-49 | -8.615850e-47 |
| Msa0439230 | Msa0547990 | 0.803137 | 4.024779e-49 | -8.615850e-47 |
| Msa0439230 | Msa0550570 | 0.826514 | 2.601586e-54 | -8.615850e-47 |
| Msa0439230 | Msa0552810 | 0.817648 | 2.957643e-52 | -8.615850e-47 |
| Msa0439230 | Msa0560470 | 0.803395 | 3.558673e-49 | -8.615850e-47 |
| Msa0439230 | Msa0561430 | 0.800756 | 1.241361e-48 | -8.615850e-47 |
| Msa0439230 | Msa0565620 | -0.810341 | 1.209785e-50 | -8.615850e-47 |
| Msa0439230 | Msa0571920 | 0.810511 | 1.111737e-50 | -8.615850e-47 |
| Msa0439230 | Msa0576940 | 0.801280 | 9.699864e-49 | -8.615850e-47 |
| Msa0439230 | Msa0578090 | 0.833205 | 6.095693e-56 | -8.615850e-47 |
| Msa0439230 | Msa0580230 | 0.813809 | 2.120712e-51 | -8.615850e-47 |
| Msa0439230 | Msa0581070 | 0.829103 | 6.207027e-55 | -8.615850e-47 |
| Msa0439230 | Msa0586850 | 0.819156 | 1.346312e-52 | -8.615850e-47 |
| Msa0439230 | Msa0588090 | 0.800657 | 1.300620e-48 | -8.615850e-47 |
| Msa0439230 | Msa0588120 | 0.824415 | 8.172253e-54 | -8.615850e-47 |
| Msa0439230 | Msa0593700 | 0.817770 | 2.775249e-52 | -8.615850e-47 |
| Msa0439230 | Msa0600610 | 0.815782 | 7.748563e-52 | -8.615850e-47 |
| Msa0439230 | Msa0610390 | 0.835095 | 2.047788e-56 | -8.615850e-47 |
| Msa0439230 | Msa0614510 | 0.838709 | 2.448211e-57 | -8.615850e-47 |
| Msa0439230 | Msa0628420 | 0.815841 | 7.519325e-52 | -8.615850e-47 |
| Msa0439230 | Msa0628500 | 0.821042 | 4.981529e-53 | -8.615850e-47 |
| Msa0439230 | Msa0633570 | 0.812377 | 4.371164e-51 | -8.615850e-47 |
| Msa0439230 | Msa0639120 | 0.801891 | 7.269657e-49 | -8.615850e-47 |
| Msa0439230 | Msa0640500 | 0.804719 | 1.887764e-49 | -8.615850e-47 |
| Msa0439230 | Msa0644030 | 0.806351 | 8.581947e-50 | -8.615850e-47 |
| Msa0439230 | Msa0650920 | 0.829193 | 5.903209e-55 | -8.615850e-47 |
| Msa0439230 | Msa0652300 | 0.810149 | 1.330431e-50 | -8.615850e-47 |
| Msa0439230 | Msa0654870 | 0.829336 | 5.449741e-55 | -8.615850e-47 |
| Msa0439230 | Msa0658480 | 0.800740 | 1.250959e-48 | -8.615850e-47 |
| Msa0439230 | Msa0659990 | 0.803506 | 3.375341e-49 | -8.615850e-47 |
| Msa0439230 | Msa0662630 | 0.824666 | 7.132068e-54 | -8.615850e-47 |
| Msa0439230 | Msa0664760 | 0.810920 | 9.067871e-51 | -8.615850e-47 |
| Msa0439230 | Msa0666230 | 0.841953 | 3.475158e-58 | -8.615850e-47 |
| Msa0439230 | Msa0679100 | 0.827378 | 1.617005e-54 | -8.615850e-47 |
| Msa0439230 | Msa0687630 | 0.816545 | 5.233846e-52 | -8.615850e-47 |
| Msa0439230 | Msa0692940 | 0.818414 | 1.985056e-52 | -8.615850e-47 |
| Msa0439230 | Msa0697080 | 0.814689 | 1.355774e-51 | -8.615850e-47 |
| Msa0439230 | Msa0697720 | 0.805284 | 1.437898e-49 | -8.615850e-47 |
| Msa0439230 | Msa0706390 | 0.815921 | 7.214349e-52 | -8.615850e-47 |
| Msa0439230 | Msa0707390 | 0.804111 | 2.526407e-49 | -8.615850e-47 |
| Msa0439230 | Msa0734960 | 0.810335 | 1.213076e-50 | -8.615850e-47 |
| Msa0439230 | Msa0742510 | 0.801210 | 1.002693e-48 | -8.615850e-47 |
| Msa0439230 | Msa0743530 | 0.816396 | 5.650594e-52 | -8.615850e-47 |
| Msa0439230 | Msa0756930 | 0.822430 | 2.378704e-53 | -8.615850e-47 |
| Msa0439230 | Msa0766670 | 0.803112 | 4.071398e-49 | -8.615850e-47 |
| Msa0439230 | Msa0780880 | 0.806533 | 7.854306e-50 | -8.615850e-47 |
| Msa0439230 | Msa0781270 | 0.802088 | 6.620936e-49 | -8.615850e-47 |
| Msa0439230 | Msa0788120 | 0.806121 | 9.591049e-50 | -8.615850e-47 |
| Msa0439230 | Msa0794050 | 0.803120 | 4.056291e-49 | -8.615850e-47 |
| Msa0439230 | Msa0814250 | 0.806956 | 6.393478e-50 | -8.615850e-47 |
| Msa0439230 | Msa0818770 | 0.814358 | 1.604386e-51 | -8.615850e-47 |
| Msa0439230 | Msa0822170 | 0.818468 | 1.929747e-52 | -8.615850e-47 |
| Msa0439230 | Msa0822180 | 0.803354 | 3.627750e-49 | -8.615850e-47 |
| Msa0439230 | Msa0824640 | 0.815056 | 1.124151e-51 | -8.615850e-47 |
| Msa0439230 | Msa0825270 | 0.809290 | 2.035409e-50 | -8.615850e-47 |
| Msa0439230 | Msa0826500 | 0.806607 | 7.578773e-50 | -8.615850e-47 |
| Msa0439230 | Msa0836500 | 0.818464 | 1.933556e-52 | -8.615850e-47 |
| Msa0439230 | Msa0850150 | 0.821343 | 4.245733e-53 | -8.615850e-47 |
| Msa0439230 | Msa0858440 | 0.804647 | 1.954204e-49 | -8.615850e-47 |
| Msa0439230 | Msa0864010 | 0.809818 | 1.567535e-50 | -8.615850e-47 |
| Msa0439230 | Msa0865570 | 0.811923 | 5.492452e-51 | -8.615850e-47 |
| Msa0439230 | Msa0869010 | 0.830618 | 2.652918e-55 | -8.615850e-47 |
| Msa0439230 | Msa0879850 | 0.804347 | 2.256686e-49 | -8.615850e-47 |
| Msa0439230 | Msa0888940 | 0.817085 | 3.959116e-52 | -8.615850e-47 |
| Msa0439230 | Msa0921870 | 0.806741 | 7.099662e-50 | -8.615850e-47 |
| Msa0439230 | Msa0924150 | -0.802089 | 6.620255e-49 | -8.615850e-47 |
| Msa0439230 | Msa0928120 | 0.806808 | 6.872227e-50 | -8.615850e-47 |
| Msa0439230 | Msa0943170 | 0.803977 | 2.694816e-49 | -8.615850e-47 |
| Msa0439230 | Msa0959840 | 0.805374 | 1.376842e-49 | -8.615850e-47 |
| Msa0439230 | Msa0960830 | 0.832330 | 1.005605e-55 | -8.615850e-47 |
| Msa0439230 | Msa0963020 | 0.829787 | 4.233773e-55 | -8.615850e-47 |
| Msa0439230 | Msa0966720 | -0.803975 | 2.696441e-49 | -8.615850e-47 |
| Msa0439230 | Msa0980940 | 0.832722 | 8.035415e-56 | -8.615850e-47 |
| Msa0439230 | Msa0994290 | 0.824012 | 1.016513e-53 | -8.615850e-47 |
| Msa0439230 | Msa0997430 | 0.819343 | 1.220602e-52 | -8.615850e-47 |
| Msa0439230 | Msa1010460 | 0.817113 | 3.902751e-52 | -8.615850e-47 |
| Msa0439230 | Msa1012350 | 0.949220 | 1.975164e-107 | -8.615850e-47 |
| Msa0439230 | Msa1012430 | 0.959212 | 3.405632e-117 | -8.615850e-47 |
| Msa0439230 | Msa1017510 | 0.815841 | 7.518333e-52 | -8.615850e-47 |
| Msa0439230 | Msa1019240 | 0.835575 | 1.549182e-56 | -8.615850e-47 |
| Msa0439230 | Msa1019260 | 0.836547 | 8.776020e-57 | -8.615850e-47 |
| Msa0439230 | Msa1025940 | 0.819151 | 1.349988e-52 | -8.615850e-47 |
| Msa0439230 | Msa1027250 | 0.818863 | 1.569491e-52 | -8.615850e-47 |
| Msa0439230 | Msa1027300 | 0.811952 | 5.413224e-51 | -8.615850e-47 |
| Msa0439230 | Msa1027360 | 0.804302 | 2.306300e-49 | -8.615850e-47 |
| Msa0439230 | Msa1030930 | 0.801830 | 7.482228e-49 | -8.615850e-47 |
| Msa0439230 | Msa1048750 | -0.806785 | 6.948453e-50 | -8.615850e-47 |
| Msa0439230 | Msa1055010 | 0.807394 | 5.164401e-50 | -8.615850e-47 |
| Msa0439230 | Msa1066490 | 0.800265 | 1.562968e-48 | -8.615850e-47 |
| Msa0439230 | Msa1070050 | 0.800994 | 1.110029e-48 | -8.615850e-47 |
| Msa0439230 | Msa1070390 | 0.848390 | 6.318772e-60 | -8.615850e-47 |
| Msa0439230 | Msa1072710 | 0.806230 | 9.100398e-50 | -8.615850e-47 |
| Msa0439230 | Msa1073400 | 0.801599 | 8.346083e-49 | -8.615850e-47 |
| Msa0439230 | Msa1083880 | 0.814638 | 1.391678e-51 | -8.615850e-47 |
| Msa0439230 | Msa1091560 | 0.881398 | 2.481245e-70 | -8.615850e-47 |
| Msa0439230 | Msa1100720 | 0.800930 | 1.144065e-48 | -8.615850e-47 |
| Msa0439230 | Msa1104210 | 0.813535 | 2.437349e-51 | -8.615850e-47 |
| Msa0439230 | Msa1113590 | 0.821290 | 4.368250e-53 | -8.615850e-47 |
| Msa0439230 | Msa1113880 | 0.805543 | 1.268651e-49 | -8.615850e-47 |
| Msa0439230 | Msa1124070 | 0.802735 | 4.872304e-49 | -8.615850e-47 |
| Msa0439230 | Msa1126510 | 0.823508 | 1.334051e-53 | -8.615850e-47 |
| Msa0439230 | Msa1126770 | 0.808855 | 2.523033e-50 | -8.615850e-47 |
| Msa0439230 | Msa1127540 | 0.846834 | 1.692900e-59 | -8.615850e-47 |
| Msa0439230 | Msa1127590 | 0.825241 | 5.217710e-54 | -8.615850e-47 |
| Msa0439230 | Msa1133400 | 0.809715 | 1.650146e-50 | -8.615850e-47 |
| Msa0439230 | Msa1134110 | 0.803562 | 3.285229e-49 | -8.615850e-47 |
| Msa0439230 | Msa1158230 | 0.823948 | 1.052190e-53 | -8.615850e-47 |
| Msa0439230 | Msa1160360 | 0.815377 | 9.536803e-52 | -8.615850e-47 |
| Msa0439230 | Msa1165780 | 0.807275 | 5.472880e-50 | -8.615850e-47 |
| Msa0439230 | Msa1166860 | 0.803136 | 4.025968e-49 | -8.615850e-47 |
| Msa0439230 | Msa1166870 | 0.832142 | 1.119218e-55 | -8.615850e-47 |
| Msa0439230 | Msa1178050 | 0.812258 | 4.640098e-51 | -8.615850e-47 |
| Msa0439230 | Msa1179950 | 0.807561 | 4.760586e-50 | -8.615850e-47 |
| Msa0439230 | Msa1179980 | 0.821471 | 3.966522e-53 | -8.615850e-47 |
| Msa0439230 | Msa1181170 | -0.808038 | 3.768054e-50 | -8.615850e-47 |
| Msa0439230 | Msa1184370 | 0.831196 | 1.914124e-55 | -8.615850e-47 |
| Msa0439230 | Msa1192850 | 0.847865 | 8.824665e-60 | -8.615850e-47 |
| Msa0439230 | Msa1199290 | 0.800055 | 1.724417e-48 | -8.615850e-47 |
| Msa0439230 | Msa1201640 | 0.814778 | 1.295658e-51 | -8.615850e-47 |
| Msa0439230 | Msa1201810 | 0.813781 | 2.151319e-51 | -8.615850e-47 |
| Msa0439230 | Msa1201830 | 0.847156 | 1.382082e-59 | -8.615850e-47 |
| Msa0439230 | Msa1202150 | 0.812625 | 3.857878e-51 | -8.615850e-47 |
| Msa0439230 | Msa1202580 | 0.837034 | 6.595954e-57 | -8.615850e-47 |
| Msa0439230 | Msa1204850 | 0.807327 | 5.336686e-50 | -8.615850e-47 |
| Msa0439230 | Msa1207730 | 0.841717 | 4.012627e-58 | -8.615850e-47 |
| Msa0439230 | Msa1227690 | 0.847315 | 1.250264e-59 | -8.615850e-47 |
| Msa0439230 | Msa1230580 | 0.823080 | 1.679390e-53 | -8.615850e-47 |
| Msa0439230 | Msa1251160 | 0.806875 | 6.651852e-50 | -8.615850e-47 |
| Msa0439230 | Msa1254710 | 0.819433 | 1.164192e-52 | -8.615850e-47 |
| Msa0439230 | Msa1259640 | 0.800551 | 1.366855e-48 | -8.615850e-47 |
| Msa0439230 | Msa1265630 | 0.806349 | 8.590168e-50 | -8.615850e-47 |
| Msa0439230 | Msa1270620 | 0.823382 | 1.427210e-53 | -8.615850e-47 |
| Msa0439230 | Msa1270690 | 0.822482 | 2.313890e-53 | -8.615850e-47 |
| Msa0439230 | Msa1294840 | 0.843989 | 9.981018e-59 | -8.615850e-47 |
| Msa0439230 | Msa1294960 | 0.816630 | 5.008600e-52 | -8.615850e-47 |
| Msa0439230 | Msa1295110 | 0.811810 | 5.809902e-51 | -8.615850e-47 |
| Msa0439230 | Msa1295490 | -0.826197 | 3.095557e-54 | -8.615850e-47 |
| Msa0439230 | Msa1296300 | 0.812663 | 3.785821e-51 | -8.615850e-47 |
| Msa0439230 | Msa1297800 | 0.806314 | 8.735407e-50 | -8.615850e-47 |
| Msa0439230 | Msa1299360 | 0.812580 | 3.946192e-51 | -8.615850e-47 |
| Msa0439230 | Msa1306990 | 0.818464 | 1.933556e-52 | -8.615850e-47 |
| Msa0439230 | Msa1307950 | 0.812381 | 4.362866e-51 | -8.615850e-47 |
| Msa0439230 | Msa1310690 | 0.829906 | 3.959547e-55 | -8.615850e-47 |
| Msa0439230 | Msa1327490 | 0.846718 | 1.821589e-59 | -8.615850e-47 |
| Msa0439230 | Msa1329790 | 0.802941 | 4.416780e-49 | -8.615850e-47 |
| Msa0439230 | Msa1340830 | 0.802589 | 5.222834e-49 | -8.615850e-47 |
| Msa0439230 | Msa1341070 | 0.801741 | 7.803444e-49 | -8.615850e-47 |
| Msa0439230 | Msa1344310 | 0.842763 | 2.120056e-58 | -8.615850e-47 |
| Msa0439230 | Msa1344850 | 0.847717 | 9.690643e-60 | -8.615850e-47 |
| Msa0439230 | Msa1345450 | 0.814361 | 1.602376e-51 | -8.615850e-47 |
| Msa0439230 | Msa1349570 | 0.807983 | 3.871784e-50 | -8.615850e-47 |
| Msa0439230 | Msa1362420 | 0.813769 | 2.164509e-51 | -8.615850e-47 |
| Msa0439230 | Msa1363330 | 0.809264 | 2.062163e-50 | -8.615850e-47 |
| Msa0439230 | Msa1369190 | 0.812124 | 4.964168e-51 | -8.615850e-47 |
| Msa0439230 | Msa1379760 | 0.821520 | 3.866083e-53 | -8.615850e-47 |
| Msa0439230 | Msa1382780 | 0.808691 | 2.735143e-50 | -8.615850e-47 |
| Msa0439230 | Msa1386600 | 0.808331 | 3.264877e-50 | -8.615850e-47 |
| Msa0439230 | Msa1387190 | 0.805345 | 1.396461e-49 | -8.615850e-47 |
| Msa0439230 | Msa1393800 | 0.815183 | 1.053207e-51 | -8.615850e-47 |
| Msa0439230 | Msa1397940 | 0.804847 | 1.774531e-49 | -8.615850e-47 |
| Msa0439230 | Msa1404190 | 0.824112 | 9.631045e-54 | -8.615850e-47 |
| Msa0439230 | Msa1411950 | 0.832054 | 1.176678e-55 | -8.615850e-47 |
| Msa0439230 | Msa1416260 | 0.801979 | 6.972688e-49 | -8.615850e-47 |
| Msa0439230 | Msa1433600 | 0.809182 | 2.147191e-50 | -8.615850e-47 |
| Msa0439230 | Msa1435770 | 0.812098 | 5.030532e-51 | -8.615850e-47 |
| Msa0439230 | Msa1438050 | 0.811899 | 5.558555e-51 | -8.615850e-47 |
| Msa0439230 | Msa1438450 | 0.814308 | 1.646010e-51 | -8.615850e-47 |
| Msa0439230 | Msa1438640 | 0.824051 | 9.951945e-54 | -8.615850e-47 |
| Msa0439230 | Msa1442850 | 0.811542 | 6.646639e-51 | -8.615850e-47 |
| Msa0439230 | Msa1450280 | 0.831464 | 1.645053e-55 | -8.615850e-47 |
| Msa0439230 | Msa1450720 | 0.800230 | 1.589019e-48 | -8.615850e-47 |
| Msa0439230 | Msa1459960 | 0.805641 | 1.210259e-49 | -8.615850e-47 |
| Msa0439230 | Msa1465080 | 0.830705 | 2.526691e-55 | -8.615850e-47 |
| Msa0239450 | Msa0439230 | 0.825735 | 3.986805e-54 | -8.615850e-47 |
| Msa0244970 | Msa0439230 | 0.802977 | 4.343278e-49 | -8.615850e-47 |
| Msa0244980 | Msa0439230 | 0.846419 | 2.197887e-59 | -8.615850e-47 |
| Msa0245430 | Msa0439230 | 0.815943 | 7.135416e-52 | -8.615850e-47 |
| Msa0262480 | Msa0439230 | 0.844375 | 7.860633e-59 | -8.615850e-47 |
| Msa0269470 | Msa0439230 | 0.801877 | 7.317447e-49 | -8.615850e-47 |
| Msa0273650 | Msa0439230 | 0.804082 | 2.561707e-49 | -8.615850e-47 |
| Msa0275360 | Msa0439230 | 0.816133 | 6.470135e-52 | -8.615850e-47 |
| Msa0280430 | Msa0439230 | 0.807858 | 4.115604e-50 | -8.615850e-47 |
| Msa0282890 | Msa0439230 | 0.804996 | 1.652305e-49 | -8.615850e-47 |
| Msa0283420 | Msa0439230 | 0.813099 | 3.038325e-51 | -8.615850e-47 |
| Msa0291520 | Msa0439230 | 0.823303 | 1.489452e-53 | -8.615850e-47 |
| Msa0300350 | Msa0439230 | 0.818237 | 2.176212e-52 | -8.615850e-47 |
| Msa0304660 | Msa0439230 | 0.805147 | 1.536286e-49 | -8.615850e-47 |
| Msa0310410 | Msa0439230 | 0.805325 | 1.409358e-49 | -8.615850e-47 |
| Msa0313930 | Msa0439230 | 0.800144 | 1.654058e-48 | -8.615850e-47 |
| Msa0321190 | Msa0439230 | 0.800678 | 1.287835e-48 | -8.615850e-47 |
| Msa0321690 | Msa0439230 | 0.806230 | 9.100398e-50 | -8.615850e-47 |
| Msa0331700 | Msa0439230 | 0.805065 | 1.598093e-49 | -8.615850e-47 |
| Msa0343190 | Msa0439230 | 0.815921 | 7.214349e-52 | -8.615850e-47 |
| Msa0363060 | Msa0439230 | 0.834695 | 2.583347e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439230 | MtrunA17_Chr7g0215521 | 97.176 | 425 | 11 | 1 | 1 | 425 | 1 | 424 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0439230 | AT3G02570.1 | 60.539 | 408 | 158 | 3 | 15 | 422 | 25 | 429 | 0.0 | 513 |
| Msa0439230 | AT1G67070.1 | 59.005 | 422 | 161 | 5 | 10 | 423 | 22 | 439 | 1.22e-178 | 506 |
| Msa0439230 | AT1G67070.2 | 59.005 | 422 | 161 | 5 | 10 | 423 | 22 | 439 | 1.22e-178 | 506 |
| Msa0439230 | AT1G67070.3 | 60.252 | 317 | 116 | 3 | 10 | 319 | 22 | 335 | 2.89e-131 | 382 |
Find 137 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCTTGGATTTGGTTTA+TGG | 0.064643 | 3_3:-4709923 | Msa0439230:three_prime_UTR |
| TGATCTACCTTTCTTGTTTA+AGG | 0.068324 | 3_3:-4714196 | Msa0439230:intron |
| AAGCTTTCTGAGCTTAATTC+TGG | 0.161202 | 3_3:-4714390 | Msa0439230:CDS |
| TTGAAAGAGATTGTTGAAAA+TGG | 0.169925 | 3_3:+4714519 | None:intergenic |
| AACACCACTGTTTCCCCTTT+TGG | 0.191794 | 3_3:+4710184 | None:intergenic |
| AGTCGGCACATCTATGAATT+TGG | 0.213240 | 3_3:+4710978 | None:intergenic |
| TGGTATTTGAAGAGTATTTA+AGG | 0.222042 | 3_3:+4714577 | None:intergenic |
| ATCCTAGCCAACTCCTTATC+TGG | 0.231811 | 3_3:+4713419 | None:intergenic |
| TGGATTGGTACCCATGATTC+TGG | 0.276246 | 3_3:-4714330 | Msa0439230:CDS |
| GTGGTGTTCCCGGCTGTTCC+AGG | 0.310385 | 3_3:-4710169 | Msa0439230:CDS |
| GAGAAAGATTGCAGAAGAAA+TGG | 0.312705 | 3_3:+4714623 | None:intergenic |
| GTCATAAAGTTGTTAACAAA+TGG | 0.315743 | 3_3:-4714224 | Msa0439230:CDS |
| GAGAATTGAGATTGAGTCAT+TGG | 0.326184 | 3_3:+4714557 | None:intergenic |
| TTCGGTGATTTCATAAACTT+TGG | 0.326384 | 3_3:+4710093 | None:intergenic |
| AATCAATACCCATCCGATAT+TGG | 0.337274 | 3_3:-4711150 | Msa0439230:CDS |
| TGAAAGAGATTGTTGAAAAT+GGG | 0.351869 | 3_3:+4714520 | None:intergenic |
| GAACCGCATGCTTATTTATC+CGG | 0.360607 | 3_3:-4711057 | Msa0439230:CDS |
| TTGTGGATTTATCACTCTTA+AGG | 0.363037 | 3_3:-4713312 | Msa0439230:intron |
| TTCTGTTAAGAATTACGATT+GGG | 0.363164 | 3_3:-4714442 | Msa0439230:CDS |
| CATCTATGAATTTGGGAGTT+AGG | 0.363872 | 3_3:+4710986 | None:intergenic |
| AGTTCAGCATAAGGCTTCAT+TGG | 0.364086 | 3_3:+4714354 | None:intergenic |
| AAAGGGTTAGTCTTAAAGAT+TGG | 0.368646 | 3_3:-4714275 | Msa0439230:CDS |
| TTTAAGGAAGAGAGAGAAAA+GGG | 0.370739 | 3_3:+4714593 | None:intergenic |
| AGCTGTGATTCATACTGTTC+CGG | 0.380324 | 3_3:-4711875 | Msa0439230:CDS |
| GATAACCCTGATTTGTTGCT+TGG | 0.381000 | 3_3:-4714246 | Msa0439230:CDS |
| ATGGTACTGAACCCACTAAT+CGG | 0.382106 | 3_3:+4709827 | None:intergenic |
| TTATGACCAAGCAACAAATC+AGG | 0.382854 | 3_3:+4714240 | None:intergenic |
| TTTCTTGTTTCTGATGATGA+TGG | 0.384063 | 3_3:-4714300 | Msa0439230:CDS |
| GGGATATATTTATTTACATA+TGG | 0.387920 | 3_3:+4710244 | None:intergenic |
| AGCTGCAATCACACCAATAT+CGG | 0.389579 | 3_3:+4711137 | None:intergenic |
| ATCGTTCGTGCATGAAATTT+CGG | 0.396967 | 3_3:-4714802 | None:intergenic |
| TCATAAAGTTGTTAACAAAT+GGG | 0.397679 | 3_3:-4714223 | Msa0439230:CDS |
| GAAGAGTACTTAGGTAGCTT+AGG | 0.398833 | 3_3:-4709896 | Msa0439230:three_prime_UTR |
| GACACTCCTCGCAGAATCTC+TGG | 0.400985 | 3_3:+4710274 | None:intergenic |
| AGGGGAAACAGTGGTGTTCC+CGG | 0.401430 | 3_3:-4710179 | Msa0439230:CDS |
| CCAACTAGGTCGACAACTTC+CGG | 0.401669 | 3_3:+4711856 | None:intergenic |
| GTCGGCACATCTATGAATTT+GGG | 0.403266 | 3_3:+4710979 | None:intergenic |
| AGCTTTCTGAGCTTAATTCT+GGG | 0.415899 | 3_3:-4714389 | Msa0439230:CDS |
| TGAAGCCTTATGCTGAACTT+TGG | 0.417829 | 3_3:-4714350 | Msa0439230:CDS |
| ATTTAAGGAAGAGAGAGAAA+AGG | 0.419665 | 3_3:+4714592 | None:intergenic |
| CTGGTGAAGCATTGTTCCTC+GGG | 0.421661 | 3_3:-4711086 | Msa0439230:CDS |
| TAAATATATCCCGCCATTTG+AGG | 0.424847 | 3_3:-4710233 | Msa0439230:CDS |
| GTGAACACAGCCTGTAGAAC+AGG | 0.424853 | 3_3:+4711772 | None:intergenic |
| GAGTTGCATCTGTACAGAAC+AGG | 0.440421 | 3_3:-4710016 | Msa0439230:CDS |
| CCGGAAGTTGTCGACCTAGT+TGG | 0.441959 | 3_3:-4711856 | Msa0439230:CDS |
| GAAAAGAAGGACCAGAATCA+TGG | 0.454156 | 3_3:+4714319 | None:intergenic |
| ATCGTTGTATTCTCCCAAAA+GGG | 0.454733 | 3_3:-4710198 | Msa0439230:CDS |
| TCGGTGATTTCATAAACTTT+GGG | 0.454996 | 3_3:+4710094 | None:intergenic |
| TTCCCATCTTTATACACATC+AGG | 0.456949 | 3_3:+4713380 | None:intergenic |
| TTGTACTTCATCCCGATTAG+TGG | 0.459096 | 3_3:-4709839 | Msa0439230:three_prime_UTR |
| GAAGGTTAAACCTGTTCTAC+AGG | 0.460116 | 3_3:-4711782 | Msa0439230:CDS |
| AACCGCATGCTTATTTATCC+GGG | 0.461885 | 3_3:-4711056 | Msa0439230:CDS |
| CCTTATGCTGAACTTTGGAT+TGG | 0.462431 | 3_3:-4714345 | Msa0439230:CDS |
| CATGTATTAGGTGCTATCTG+TGG | 0.466843 | 3_3:-4713468 | Msa0439230:intron |
| ATGGACGGACCTGGAACAGC+CGG | 0.468574 | 3_3:+4710160 | None:intergenic |
| GTTCTTCTTTCTTACACAAA+GGG | 0.471658 | 3_3:-4714780 | Msa0439230:five_prime_UTR |
| TGGTGCTGCAAATGCAAATC+TGG | 0.472964 | 3_3:-4711836 | Msa0439230:CDS |
| ATGTATTAGGTGCTATCTGT+GGG | 0.477009 | 3_3:-4713467 | Msa0439230:intron |
| CATCCTGATGTGTATAAAGA+TGG | 0.480890 | 3_3:-4713383 | Msa0439230:CDS |
| TGGTACTGAACCCACTAATC+GGG | 0.485125 | 3_3:+4709828 | None:intergenic |
| GATTGCAGAAGAAATGGAAA+AGG | 0.485508 | 3_3:+4714629 | None:intergenic |
| GTCATTGCAAGAGCCATCTC+AGG | 0.487041 | 3_3:+4713350 | None:intergenic |
| TATGAATTTGGGAGTTAGGC+CGG | 0.490147 | 3_3:+4710990 | None:intergenic |
| AATTACGATTGGGGTTTACC+TGG | 0.492223 | 3_3:-4714432 | Msa0439230:CDS |
| CCTGGTGAAGCATTGTTCCT+CGG | 0.492483 | 3_3:-4711087 | Msa0439230:CDS |
| CAAGACTCTTAAGCATTCAA+AGG | 0.501223 | 3_3:-4709974 | Msa0439230:exon |
| TCCTAGCCAACTCCTTATCT+GGG | 0.501884 | 3_3:+4713420 | None:intergenic |
| CTCTTTCAATCTTCTTACAA+TGG | 0.502557 | 3_3:-4714505 | Msa0439230:exon |
| TCGATCTCGAATTCCTCAAA+TGG | 0.502838 | 3_3:+4710220 | None:intergenic |
| TATGGAAAAGAAGAGTACTT+AGG | 0.503711 | 3_3:-4709905 | Msa0439230:three_prime_UTR |
| GATCGTTGTATTCTCCCAAA+AGG | 0.504887 | 3_3:-4710199 | Msa0439230:CDS |
| TTTACCTGGTCAATTGTCAC+AGG | 0.505143 | 3_3:-4714418 | Msa0439230:CDS |
| CCAATCCAAAGTTCAGCATA+AGG | 0.505779 | 3_3:+4714345 | None:intergenic |
| GGTGAGGCATTTGACAGAAA+AGG | 0.512954 | 3_3:-4711196 | Msa0439230:CDS |
| ACGCTAATCTCTGTGTAAGC+AGG | 0.519438 | 3_3:+4710052 | None:intergenic |
| GTTCTGTTAAGAATTACGAT+TGG | 0.521470 | 3_3:-4714443 | Msa0439230:CDS |
| TCACATACCTTAAACAAGAA+AGG | 0.521871 | 3_3:+4714189 | None:intergenic |
| TCATCAGAAACAAGAAAAGA+AGG | 0.521989 | 3_3:+4714306 | None:intergenic |
| AGCGAAAAGAGCATCACCTT+CGG | 0.522693 | 3_3:+4710075 | None:intergenic |
| CACCAGGATTGAGTTTCACA+TGG | 0.523571 | 3_3:+4711103 | None:intergenic |
| TTGCATTTGCAGCACCAACT+AGG | 0.525377 | 3_3:+4711842 | None:intergenic |
| TTCTGATGATGATGGACAAA+GGG | 0.529434 | 3_3:-4714292 | Msa0439230:CDS |
| GGAGCTGTTGGTGCTGCGAT+TGG | 0.529500 | 3_3:-4711175 | Msa0439230:CDS |
| TTCCATGCTCACATACAAGC+AGG | 0.540703 | 3_3:-4710950 | Msa0439230:intron |
| TATCAATCTGTTCACAGCAT+AGG | 0.542513 | 3_3:+4711717 | None:intergenic |
| TTTGACAGAAAAGGAGCTGT+TGG | 0.543234 | 3_3:-4711187 | Msa0439230:CDS |
| CCGAGGAACAATGCTTCACC+AGG | 0.545757 | 3_3:+4711087 | None:intergenic |
| TGTGTTCATCGATCCTTCCC+CGG | 0.546008 | 3_3:+4710123 | None:intergenic |
| TATACAAGCTCACCCAGATA+AGG | 0.548295 | 3_3:-4713432 | Msa0439230:CDS |
| AAGTTTCTGAAGTGAATTGT+GGG | 0.552930 | 3_3:+4714470 | None:intergenic |
| TCTCGAATTCCTCAAATGGC+GGG | 0.554372 | 3_3:+4710224 | None:intergenic |
| TTAGGTGCTATCTGTGGGGA+AGG | 0.554929 | 3_3:-4713462 | Msa0439230:intron |
| TGGGAATCATAAACCTGAGA+TGG | 0.555786 | 3_3:-4713363 | Msa0439230:CDS |
| CGGGGAGTGTATTGAATGCA+TGG | 0.556667 | 3_3:-4711037 | Msa0439230:CDS |
| AACCATGTGAAACTCAATCC+TGG | 0.557868 | 3_3:-4711105 | Msa0439230:CDS |
| CATAAAGTTGTTAACAAATG+GGG | 0.561333 | 3_3:-4714222 | Msa0439230:CDS |
| TATGACCAAGCAACAAATCA+GGG | 0.561583 | 3_3:+4714241 | None:intergenic |
| TTCAAAGGTGGAAGAGCTTG+TGG | 0.562168 | 3_3:-4709959 | Msa0439230:three_prime_UTR |
| TACCTGCTTGTATGTGAGCA+TGG | 0.563027 | 3_3:+4710948 | None:intergenic |
| AAAAGAAGGACCAGAATCAT+GGG | 0.564262 | 3_3:+4714320 | None:intergenic |
| GGTTCTTCTTTCTTACACAA+AGG | 0.565650 | 3_3:-4714781 | Msa0439230:five_prime_UTR |
| GCAATCACACCAATATCGGA+TGG | 0.570657 | 3_3:+4711141 | None:intergenic |
| TGTACTTCATCCCGATTAGT+GGG | 0.573043 | 3_3:-4709838 | Msa0439230:three_prime_UTR |
| ACCCAGATAAGGAGTTGGCT+AGG | 0.574603 | 3_3:-4713421 | Msa0439230:CDS |
| GACTCTTAAGCATTCAAAGG+TGG | 0.575143 | 3_3:-4709971 | Msa0439230:exon |
| TGATCAGAATGGTGAAGAGA+AGG | 0.578017 | 3_3:-4711800 | Msa0439230:CDS |
| TCTGACAATGTTGTGCGAGC+CGG | 0.584140 | 3_3:-4711009 | Msa0439230:CDS |
| CATGCATTCAATACACTCCC+CGG | 0.594196 | 3_3:+4711038 | None:intergenic |
| AGAAGAAATGGAAAAGGAAA+CGG | 0.594376 | 3_3:+4714635 | None:intergenic |
| GAAGTTTCTGAAGTGAATTG+TGG | 0.595226 | 3_3:+4714469 | None:intergenic |
| ATCTCGAATTCCTCAAATGG+CGG | 0.596472 | 3_3:+4710223 | None:intergenic |
| ATTGATAAATCGACTGCATG+AGG | 0.598903 | 3_3:-4711701 | Msa0439230:CDS |
| TGGACGGACCTGGAACAGCC+GGG | 0.599936 | 3_3:+4710161 | None:intergenic |
| AGCTCACCCAGATAAGGAGT+TGG | 0.600443 | 3_3:-4713426 | Msa0439230:CDS |
| GCAACCTGTGACAATTGACC+AGG | 0.605256 | 3_3:+4714414 | None:intergenic |
| CAATCACACCAATATCGGAT+GGG | 0.611100 | 3_3:+4711142 | None:intergenic |
| TTATCTAATCTTGTTGAACA+CGG | 0.613308 | 3_3:+4714740 | None:intergenic |
| TGTTCTGTACAGATGCAACT+CGG | 0.623652 | 3_3:+4710018 | None:intergenic |
| TCGACTGCATGAGGAAAGTG+AGG | 0.627796 | 3_3:-4711692 | Msa0439230:intron |
| TTTCTGATGATGATGGACAA+AGG | 0.639421 | 3_3:-4714293 | Msa0439230:CDS |
| AGAAATGGAAAAGGAAACGG+TGG | 0.642298 | 3_3:+4714638 | None:intergenic |
| AAAGTTTATGAAATCACCGA+AGG | 0.643879 | 3_3:-4710091 | Msa0439230:CDS |
| TCGTTGTATTCTCCCAAAAG+GGG | 0.650658 | 3_3:-4710197 | Msa0439230:CDS |
| ACCGCATGCTTATTTATCCG+GGG | 0.651731 | 3_3:-4711055 | Msa0439230:CDS |
| AGTTGCATCTGTACAGAACA+GGG | 0.662530 | 3_3:-4710015 | Msa0439230:CDS |
| TTAGAAACTAGTGATCAGAA+TGG | 0.664033 | 3_3:-4711811 | Msa0439230:CDS |
| GTGAGCATGGAACAAAGAGT+CGG | 0.664307 | 3_3:+4710961 | None:intergenic |
| GGGGAAGGATCGATGAACAC+AGG | 0.664529 | 3_3:-4710121 | Msa0439230:CDS |
| ATCCTGATGTGTATAAAGAT+GGG | 0.669111 | 3_3:-4713382 | Msa0439230:CDS |
| TCTCCCAAAAGGGGAAACAG+TGG | 0.677647 | 3_3:-4710188 | Msa0439230:CDS |
| CATGCGGTTCATTCGCCCCG+AGG | 0.682048 | 3_3:+4711070 | None:intergenic |
| TCCCCGGATAAATAAGCATG+CGG | 0.684201 | 3_3:+4711054 | None:intergenic |
| TCTGTTAAGAATTACGATTG+GGG | 0.690814 | 3_3:-4714441 | Msa0439230:CDS |
| AGTTTCTGAAGTGAATTGTG+GGG | 0.698513 | 3_3:+4714471 | None:intergenic |
| TGGTGAAGCATTGTTCCTCG+GGG | 0.705943 | 3_3:-4711085 | Msa0439230:CDS |
| AAAGGTGGAAGAGCTTGTGG+AGG | 0.712969 | 3_3:-4709956 | Msa0439230:three_prime_UTR |
| TGTATTAGGTGCTATCTGTG+GGG | 0.728182 | 3_3:-4713466 | Msa0439230:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATTTTTTATTATTTT+TGG | - | chr3_3:4714702-4714721 | Msa0439230:five_prime_UTR | 0.0% |
| !!! | TTTTTTTAATGTTTTTTTGT+TGG | - | chr3_3:4710279-4710298 | Msa0439230:CDS | 10.0% |
| !!! | ACAAAAATTATTAATTTTCT+TGG | + | chr3_3:4711909-4711928 | None:intergenic | 10.0% |
| !! | AAATGCAAATAAATAAAAAT+AGG | - | chr3_3:4712066-4712085 | Msa0439230:intron | 10.0% |
| !!! | CTAATTTTCAACTTATAATA+AGG | + | chr3_3:4711323-4711342 | None:intergenic | 15.0% |
| !!! | CTTATTATAAGTTGAAAATT+AGG | - | chr3_3:4711321-4711340 | Msa0439230:intron | 15.0% |
| !! | TTGTTATAAAGTAAAATATG+TGG | - | chr3_3:4711706-4711725 | Msa0439230:CDS | 15.0% |
| !! | ATGCAATAAGAAATAATTAA+GGG | + | chr3_3:4711969-4711988 | None:intergenic | 15.0% |
| !! | AATGCAATAAGAAATAATTA+AGG | + | chr3_3:4711970-4711989 | None:intergenic | 15.0% |
| !!! | TTTTTTAAACTTGTAGAATA+AGG | - | chr3_3:4712420-4712439 | Msa0439230:intron | 15.0% |
| !!! | TTCTGTTTTTTTTTCTATTT+AGG | - | chr3_3:4712521-4712540 | Msa0439230:intron | 15.0% |
| !! | ATTCTAATAATTGAACTTTA+GGG | + | chr3_3:4713751-4713770 | None:intergenic | 15.0% |
| !! | AATTCTAATAATTGAACTTT+AGG | + | chr3_3:4713752-4713771 | None:intergenic | 15.0% |
| !! | TCATAAAGTTGTTAACAAAT+GGG | - | chr3_3:4710203-4710222 | Msa0439230:CDS | 20.0% |
| !!! | GTTGTTTAGTTTTTATGAAA+AGG | - | chr3_3:4710428-4710447 | Msa0439230:intron | 20.0% |
| !! | ATTTAAACAAAGAAATCCAA+GGG | + | chr3_3:4710662-4710681 | None:intergenic | 20.0% |
| !!! | TTGGATTTCTTTGTTTAAAT+GGG | - | chr3_3:4710662-4710681 | Msa0439230:intron | 20.0% |
| !! | GTTGTATATAGTTTATGAAA+AGG | - | chr3_3:4710914-4710933 | Msa0439230:intron | 20.0% |
| !! | TATATAGTTTATGAAAAGGT+TGG | - | chr3_3:4710918-4710937 | Msa0439230:intron | 20.0% |
| !!! | ATTATAAGTTGAAAATTAGG+TGG | - | chr3_3:4711324-4711343 | Msa0439230:intron | 20.0% |
| !!! | TTATTACAGATCTTTTTGTT+TGG | - | chr3_3:4711750-4711769 | Msa0439230:CDS | 20.0% |
| !!! | TTTGAGAATAAGTTTTTCTT+CGG | - | chr3_3:4711814-4711833 | Msa0439230:CDS | 20.0% |
| !! | CAATAAAACGACAAATAAAA+AGG | + | chr3_3:4711873-4711892 | None:intergenic | 20.0% |
| !! | ATAATACCCTTAACTATTTA+TGG | + | chr3_3:4712010-4712029 | None:intergenic | 20.0% |
| !! | ATTTAGTTAACTCAAAAGTT+CGG | - | chr3_3:4712216-4712235 | Msa0439230:intron | 20.0% |
| !! | TACAATAAATCAGTAAAAGA+TGG | + | chr3_3:4712472-4712491 | None:intergenic | 20.0% |
| !! | TTATTGTAATGTTATTCTCT+TGG | - | chr3_3:4712484-4712503 | Msa0439230:intron | 20.0% |
| !!! | TGAATAGACTCTTAATTTTA+TGG | - | chr3_3:4713089-4713108 | Msa0439230:intron | 20.0% |
| !!! | AACTATTGATTTCATAATAG+TGG | + | chr3_3:4713131-4713150 | None:intergenic | 20.0% |
| !!! | ACTTTTATAACACACATTAA+TGG | - | chr3_3:4713532-4713551 | Msa0439230:intron | 20.0% |
| !! | GATTAAACACATATTTATCA+TGG | - | chr3_3:4714040-4714059 | Msa0439230:intron | 20.0% |
| !! | GGGATATATTTATTTACATA+TGG | + | chr3_3:4714185-4714204 | None:intergenic | 20.0% |
| !! | AGGAAATAAAAAGAAATTCT+TGG | - | chr3_3:4714490-4714509 | Msa0439230:exon | 20.0% |
| !! | TAAAAAGAAATTCTTGGATT+TGG | - | chr3_3:4714496-4714515 | Msa0439230:exon | 20.0% |
| !!! | TATAATTTTATTCGCAAACA+TGG | + | chr3_3:4714637-4714656 | None:intergenic | 20.0% |
| ! | TTATCTAATCTTGTTGAACA+CGG | + | chr3_3:4709689-4709708 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGGATTCTTGTTT+GGG | + | chr3_3:4709715-4709734 | None:intergenic | 25.0% |
| !!! | TGAAGATAATCACTTTTTTG+TGG | + | chr3_3:4709728-4709747 | None:intergenic | 25.0% |
| !!! | TGGTATTTGAAGAGTATTTA+AGG | + | chr3_3:4709852-4709871 | None:intergenic | 25.0% |
| ! | TGAAAGAGATTGTTGAAAAT+GGG | + | chr3_3:4709909-4709928 | None:intergenic | 25.0% |
| ! | TTGAAAGAGATTGTTGAAAA+TGG | + | chr3_3:4709910-4709929 | None:intergenic | 25.0% |
| ! | TTCTGTTAAGAATTACGATT+GGG | - | chr3_3:4709984-4710003 | Msa0439230:exon | 25.0% |
| ! | GTCATAAAGTTGTTAACAAA+TGG | - | chr3_3:4710202-4710221 | Msa0439230:CDS | 25.0% |
| ! | CATAAAGTTGTTAACAAATG+GGG | - | chr3_3:4710204-4710223 | Msa0439230:CDS | 25.0% |
| !!! | TATGTGATTTTGATTACTAG+TGG | - | chr3_3:4710253-4710272 | Msa0439230:CDS | 25.0% |
| !! | TTTGTTGGTTACTATGTAAT+TGG | - | chr3_3:4710294-4710313 | Msa0439230:intron | 25.0% |
| ! | AATTGGTGTGAAATATTCAT+TGG | - | chr3_3:4710311-4710330 | Msa0439230:intron | 25.0% |
| ! | CATTTAAACAAAGAAATCCA+AGG | + | chr3_3:4710663-4710682 | None:intergenic | 25.0% |
| !! | CTTGGATTTCTTTGTTTAAA+TGG | - | chr3_3:4710661-4710680 | Msa0439230:intron | 25.0% |
| !!! | TCTGTTGTTTTTCATGTATT+AGG | - | chr3_3:4710946-4710965 | Msa0439230:intron | 25.0% |
| ! | GGTAGTATTTAATTATTCTG+TGG | - | chr3_3:4711135-4711154 | Msa0439230:CDS | 25.0% |
| ! | TATTATGAGAATAACTGAAC+TGG | - | chr3_3:4711191-4711210 | Msa0439230:CDS | 25.0% |
| ! | ATTGTTAGTTAGAATATCAC+TGG | + | chr3_3:4711623-4711642 | None:intergenic | 25.0% |
| !! | AATTTGAAATGATAACCCTT+TGG | - | chr3_3:4711665-4711684 | Msa0439230:intron | 25.0% |
| !! | TTGAGAATAAGTTTTTCTTC+GGG | - | chr3_3:4711815-4711834 | Msa0439230:CDS | 25.0% |
| !! | ACTTATTTGAGATTATCTAC+TGG | + | chr3_3:4713064-4713083 | None:intergenic | 25.0% |
| ! | AATGTGTGTTATAAAAGTTG+CGG | + | chr3_3:4713530-4713549 | None:intergenic | 25.0% |
| !!! | TCAAATTTTAAAACCACGTA+TGG | - | chr3_3:4713624-4713643 | Msa0439230:intron | 25.0% |
| !! | AAGACTGAAATAAGTTCTAA+CGG | + | chr3_3:4713777-4713796 | None:intergenic | 25.0% |
| ! | TCTTCCTTTGAATTTCATAT+TGG | - | chr3_3:4713832-4713851 | Msa0439230:intron | 25.0% |
| ! | ATGACCAATATGAAATTCAA+AGG | + | chr3_3:4713839-4713858 | None:intergenic | 25.0% |
| ! | TTTGAATTTCATATTGGTCA+TGG | - | chr3_3:4713838-4713857 | Msa0439230:intron | 25.0% |
| ! | GATTCATCTTTATTGAGATT+TGG | - | chr3_3:4713860-4713879 | Msa0439230:intron | 25.0% |
| ! | TGCAAAAAAAACAGAACAAA+AGG | + | chr3_3:4713888-4713907 | None:intergenic | 25.0% |
| ! | TGTGATATTAACTCAATTGT+AGG | - | chr3_3:4713969-4713988 | Msa0439230:intron | 25.0% |
| ! | ATGCATAACCATATACTATT+TGG | - | chr3_3:4713999-4714018 | Msa0439230:intron | 25.0% |
| !!! | AAATTCTCTTATTTTCTCAC+AGG | - | chr3_3:4714124-4714143 | Msa0439230:intron | 25.0% |
| !!! | AATTCTCTTATTTTCTCACA+GGG | - | chr3_3:4714125-4714144 | Msa0439230:intron | 25.0% |
| !! | AAATTCTTGGATTTGGTTTA+TGG | - | chr3_3:4714503-4714522 | Msa0439230:exon | 25.0% |
| GTTCTTCTTTCTTACACAAA+GGG | - | chr3_3:4709646-4709665 | Msa0439230:three_prime_UTR | 30.0% | |
| !!! | CTTTTTTGTGGATTCTTGTT+TGG | + | chr3_3:4709716-4709735 | None:intergenic | 30.0% |
| AGAAGAAATGGAAAAGGAAA+CGG | + | chr3_3:4709794-4709813 | None:intergenic | 30.0% | |
| TTTAAGGAAGAGAGAGAAAA+GGG | + | chr3_3:4709836-4709855 | None:intergenic | 30.0% | |
| ATTTAAGGAAGAGAGAGAAA+AGG | + | chr3_3:4709837-4709856 | None:intergenic | 30.0% | |
| CTCTTTCAATCTTCTTACAA+TGG | - | chr3_3:4709921-4709940 | Msa0439230:three_prime_UTR | 30.0% | |
| !! | AAGTTTCTGAAGTGAATTGT+GGG | + | chr3_3:4709959-4709978 | None:intergenic | 30.0% |
| GTTCTGTTAAGAATTACGAT+TGG | - | chr3_3:4709983-4710002 | Msa0439230:exon | 30.0% | |
| TCTGTTAAGAATTACGATTG+GGG | - | chr3_3:4709985-4710004 | Msa0439230:CDS | 30.0% | |
| TCATCAGAAACAAGAAAAGA+AGG | + | chr3_3:4710123-4710142 | None:intergenic | 30.0% | |
| !! | TTTCTTGTTTCTGATGATGA+TGG | - | chr3_3:4710126-4710145 | Msa0439230:CDS | 30.0% |
| !! | AAAGGGTTAGTCTTAAAGAT+TGG | - | chr3_3:4710151-4710170 | Msa0439230:CDS | 30.0% |
| ! | TGATCTACCTTTCTTGTTTA+AGG | - | chr3_3:4710230-4710249 | Msa0439230:CDS | 30.0% |
| TCACATACCTTAAACAAGAA+AGG | + | chr3_3:4710240-4710259 | None:intergenic | 30.0% | |
| !! | TGTTGATAACTAATCTGTGT+CGG | - | chr3_3:4710337-4710356 | Msa0439230:intron | 30.0% |
| !!! | GGTGTTTAGTTTTACGAAAA+AGG | - | chr3_3:4710683-4710702 | Msa0439230:intron | 30.0% |
| TCAATACAAACATAGACATC+AGG | + | chr3_3:4710847-4710866 | None:intergenic | 30.0% | |
| ! | TGTTTGTATTGATGCTTCAT+AGG | - | chr3_3:4710855-4710874 | Msa0439230:intron | 30.0% |
| ATCCTGATGTGTATAAAGAT+GGG | - | chr3_3:4711044-4711063 | Msa0439230:CDS | 30.0% | |
| TTGTGGATTTATCACTCTTA+AGG | - | chr3_3:4711114-4711133 | Msa0439230:CDS | 30.0% | |
| AAGGAATTATACCTAACAGA+TGG | + | chr3_3:4711494-4711513 | None:intergenic | 30.0% | |
| TTCACTCAGTCATATCATTA+AGG | + | chr3_3:4711513-4711532 | None:intergenic | 30.0% | |
| GGTTGTATTGTATCAGAAAA+AGG | + | chr3_3:4711602-4711621 | None:intergenic | 30.0% | |
| ! | TGAGAATAAGTTTTTCTTCG+GGG | - | chr3_3:4711816-4711835 | Msa0439230:CDS | 30.0% |
| ! | ATTTTCTTGGTACACGTAAA+TGG | + | chr3_3:4711896-4711915 | None:intergenic | 30.0% |
| TCTCTGCCATAAATAGTTAA+GGG | - | chr3_3:4712001-4712020 | Msa0439230:intron | 30.0% | |
| TACCTAAACAACTGCTAAAA+AGG | - | chr3_3:4712096-4712115 | Msa0439230:intron | 30.0% | |
| !! | TTCCTTTTTAGCAGTTGTTT+AGG | + | chr3_3:4712101-4712120 | None:intergenic | 30.0% |
| AACTGCTAAAAAGGAACATA+GGG | - | chr3_3:4712105-4712124 | Msa0439230:intron | 30.0% | |
| CATGACGTGTCTTTATTAAA+AGG | - | chr3_3:4712152-4712171 | Msa0439230:intron | 30.0% | |
| TAACTCAAAAGTTCGGATTT+CGG | - | chr3_3:4712223-4712242 | Msa0439230:intron | 30.0% | |
| ACAAGTTAAGACAATGCAAT+CGG | + | chr3_3:4712308-4712327 | None:intergenic | 30.0% | |
| AAGATGGTTGAATATACCAA+AGG | + | chr3_3:4712456-4712475 | None:intergenic | 30.0% | |
| TTAGAAACTAGTGATCAGAA+TGG | - | chr3_3:4712615-4712634 | Msa0439230:intron | 30.0% | |
| AGTTGATTACTTAATCCGTT+TGG | - | chr3_3:4712759-4712778 | Msa0439230:intron | 30.0% | |
| CCAAACTCTTAAAAACCAAA+CGG | + | chr3_3:4712777-4712796 | None:intergenic | 30.0% | |
| CATAAGCTAAAATCAGTTGA+TGG | - | chr3_3:4712985-4713004 | Msa0439230:intron | 30.0% | |
| ! | TAATGTTCTCATTTTGCATC+AGG | - | chr3_3:4713209-4713228 | Msa0439230:intron | 30.0% |
| ATATGATAAGCACTTATGCA+AGG | + | chr3_3:4713558-4713577 | None:intergenic | 30.0% | |
| TGTTCATGCCAAATAGTATA+TGG | + | chr3_3:4714010-4714029 | None:intergenic | 30.0% | |
| TCATGGTTTCAAAATTTCGA+CGG | - | chr3_3:4714057-4714076 | Msa0439230:intron | 30.0% | |
| CCTATTACGATTCATTTCAA+AGG | + | chr3_3:4714092-4714111 | None:intergenic | 30.0% | |
| !! | CCTTTGAAATGAATCGTAAT+AGG | - | chr3_3:4714089-4714108 | Msa0439230:intron | 30.0% |
| TCGGTGATTTCATAAACTTT+GGG | + | chr3_3:4714335-4714354 | None:intergenic | 30.0% | |
| TTCGGTGATTTCATAAACTT+TGG | + | chr3_3:4714336-4714355 | None:intergenic | 30.0% | |
| AAAGTTTATGAAATCACCGA+AGG | - | chr3_3:4714335-4714354 | Msa0439230:CDS | 30.0% | |
| !! | TATGGAAAAGAAGAGTACTT+AGG | - | chr3_3:4714521-4714540 | Msa0439230:five_prime_UTR | 30.0% |
| ! | AACATGGAAAAAAGTGCAAA+TGG | + | chr3_3:4714621-4714640 | None:intergenic | 30.0% |
| GGTTCTTCTTTCTTACACAA+AGG | - | chr3_3:4709645-4709664 | Msa0439230:three_prime_UTR | 35.0% | |
| GATTGCAGAAGAAATGGAAA+AGG | + | chr3_3:4709800-4709819 | None:intergenic | 35.0% | |
| GAGAAAGATTGCAGAAGAAA+TGG | + | chr3_3:4709806-4709825 | None:intergenic | 35.0% | |
| GAGAATTGAGATTGAGTCAT+TGG | + | chr3_3:4709872-4709891 | None:intergenic | 35.0% | |
| !! | AGTTTCTGAAGTGAATTGTG+GGG | + | chr3_3:4709958-4709977 | None:intergenic | 35.0% |
| !! | GAAGTTTCTGAAGTGAATTG+TGG | + | chr3_3:4709960-4709979 | None:intergenic | 35.0% |
| AAGCTTTCTGAGCTTAATTC+TGG | - | chr3_3:4710036-4710055 | Msa0439230:CDS | 35.0% | |
| AGCTTTCTGAGCTTAATTCT+GGG | - | chr3_3:4710037-4710056 | Msa0439230:CDS | 35.0% | |
| AAAAGAAGGACCAGAATCAT+GGG | + | chr3_3:4710109-4710128 | None:intergenic | 35.0% | |
| !! | TTTCTGATGATGATGGACAA+AGG | - | chr3_3:4710133-4710152 | Msa0439230:CDS | 35.0% |
| !! | TTCTGATGATGATGGACAAA+GGG | - | chr3_3:4710134-4710153 | Msa0439230:CDS | 35.0% |
| TATGACCAAGCAACAAATCA+GGG | + | chr3_3:4710188-4710207 | None:intergenic | 35.0% | |
| TTATGACCAAGCAACAAATC+AGG | + | chr3_3:4710189-4710208 | None:intergenic | 35.0% | |
| !! | GTTGATAACTAATCTGTGTC+GGG | - | chr3_3:4710338-4710357 | Msa0439230:intron | 35.0% |
| ! | TTGATAACTAATCTGTGTCG+GGG | - | chr3_3:4710339-4710358 | Msa0439230:intron | 35.0% |
| ! | ACATTGGTCTGAGCAAAATT+GGG | + | chr3_3:4710371-4710390 | None:intergenic | 35.0% |
| ! | ATGTATTAGGTGCTATCTGT+GGG | - | chr3_3:4710959-4710978 | Msa0439230:CDS | 35.0% |
| CATCCTGATGTGTATAAAGA+TGG | - | chr3_3:4711043-4711062 | Msa0439230:CDS | 35.0% | |
| TTCCCATCTTTATACACATC+AGG | + | chr3_3:4711049-4711068 | None:intergenic | 35.0% | |
| ! | TCTTGCAATGACAGATTTTG+AGG | - | chr3_3:4711087-4711106 | Msa0439230:CDS | 35.0% |
| TCAATACTCATGAGTGTGAT+TGG | - | chr3_3:4711462-4711481 | Msa0439230:intron | 35.0% | |
| GTTGCTTCATTAACTCCAAA+GGG | + | chr3_3:4711683-4711702 | None:intergenic | 35.0% | |
| AGTTGCTTCATTAACTCCAA+AGG | + | chr3_3:4711684-4711703 | None:intergenic | 35.0% | |
| AAAGCAGCAGAACTTCAATT+TGG | + | chr3_3:4711781-4711800 | None:intergenic | 35.0% | |
| ! | GAGAATAAGTTTTTCTTCGG+GGG | - | chr3_3:4711817-4711836 | Msa0439230:CDS | 35.0% |
| CTCTCTGCCATAAATAGTTA+AGG | - | chr3_3:4712000-4712019 | Msa0439230:intron | 35.0% | |
| CAACTGCTAAAAAGGAACAT+AGG | - | chr3_3:4712104-4712123 | Msa0439230:intron | 35.0% | |
| AGAATGACAGAAATGAACCA+TGG | + | chr3_3:4712255-4712274 | None:intergenic | 35.0% | |
| ATTTCTGTCATTCTCCAAGA+CGG | - | chr3_3:4712261-4712280 | Msa0439230:intron | 35.0% | |
| CAAGTTAAGACAATGCAATC+GGG | + | chr3_3:4712307-4712326 | None:intergenic | 35.0% | |
| TCGACCAAAAAAGACTGTTT+AGG | + | chr3_3:4712367-4712386 | None:intergenic | 35.0% | |
| ATAAGGTTAGAGCTTACCTT+TGG | - | chr3_3:4712437-4712456 | Msa0439230:intron | 35.0% | |
| TATCAATCTGTTCACAGCAT+AGG | + | chr3_3:4712712-4712731 | None:intergenic | 35.0% | |
| ATTGATAAATCGACTGCATG+AGG | - | chr3_3:4712725-4712744 | Msa0439230:intron | 35.0% | |
| !!! | CCGTTTGGTTTTTAAGAGTT+TGG | - | chr3_3:4712774-4712793 | Msa0439230:intron | 35.0% |
| ACTAACATTACGAGACAAGA+AGG | + | chr3_3:4712833-4712852 | None:intergenic | 35.0% | |
| AATGTTAGTTACGATGTACG+TGG | - | chr3_3:4712844-4712863 | Msa0439230:intron | 35.0% | |
| TGAAGTCGTTTATCCAAACA+AGG | + | chr3_3:4712877-4712896 | None:intergenic | 35.0% | |
| GTTTCTCCATATTGTGTGTT+AGG | - | chr3_3:4713166-4713185 | Msa0439230:intron | 35.0% | |
| CATCTACCTAACACACAATA+TGG | + | chr3_3:4713175-4713194 | None:intergenic | 35.0% | |
| AATCAATACCCATCCGATAT+TGG | - | chr3_3:4713276-4713295 | Msa0439230:intron | 35.0% | |
| CATCTATGAATTTGGGAGTT+AGG | + | chr3_3:4713443-4713462 | None:intergenic | 35.0% | |
| TACACCTGATTACTATGCTA+AGG | - | chr3_3:4713796-4713815 | Msa0439230:intron | 35.0% | |
| CAAAATTTCGACGGAATACA+TGG | - | chr3_3:4714066-4714085 | Msa0439230:intron | 35.0% | |
| TAAATATATCCCGCCATTTG+AGG | - | chr3_3:4714193-4714212 | Msa0439230:intron | 35.0% | |
| ATCGTTGTATTCTCCCAAAA+GGG | - | chr3_3:4714228-4714247 | Msa0439230:CDS | 35.0% | |
| CAAGACTCTTAAGCATTCAA+AGG | - | chr3_3:4714452-4714471 | Msa0439230:CDS | 35.0% | |
| !!! | TAGGTAGTTTTCGAGTTCTT+TGG | - | chr3_3:4714549-4714568 | Msa0439230:five_prime_UTR | 35.0% |
| !!! | TAGTTTTCGAGTTCTTTGGT+GGG | - | chr3_3:4714553-4714572 | Msa0439230:five_prime_UTR | 35.0% |
| AGAAATGGAAAAGGAAACGG+TGG | + | chr3_3:4709791-4709810 | None:intergenic | 40.0% | |
| AATTACGATTGGGGTTTACC+TGG | - | chr3_3:4709994-4710013 | Msa0439230:CDS | 40.0% | |
| TTTACCTGGTCAATTGTCAC+AGG | - | chr3_3:4710008-4710027 | Msa0439230:CDS | 40.0% | |
| AGTTCAGCATAAGGCTTCAT+TGG | + | chr3_3:4710075-4710094 | None:intergenic | 40.0% | |
| ! | TGAAGCCTTATGCTGAACTT+TGG | - | chr3_3:4710076-4710095 | Msa0439230:CDS | 40.0% |
| CCAATCCAAAGTTCAGCATA+AGG | + | chr3_3:4710084-4710103 | None:intergenic | 40.0% | |
| CCTTATGCTGAACTTTGGAT+TGG | - | chr3_3:4710081-4710100 | Msa0439230:CDS | 40.0% | |
| GAAAAGAAGGACCAGAATCA+TGG | + | chr3_3:4710110-4710129 | None:intergenic | 40.0% | |
| !! | GATAACCCTGATTTGTTGCT+TGG | - | chr3_3:4710180-4710199 | Msa0439230:CDS | 40.0% |
| TGATAACTAATCTGTGTCGG+GGG | - | chr3_3:4710340-4710359 | Msa0439230:intron | 40.0% | |
| ! | CACATTGGTCTGAGCAAAAT+TGG | + | chr3_3:4710372-4710391 | None:intergenic | 40.0% |
| !! | AAGGGTATCCAACATCACAT+TGG | + | chr3_3:4710387-4710406 | None:intergenic | 40.0% |
| ACACCTTCAACCTCAAATGT+CGG | + | chr3_3:4710484-4710503 | None:intergenic | 40.0% | |
| GTGTCTAACACAGTCATTGT+TGG | - | chr3_3:4710522-4710541 | Msa0439230:intron | 40.0% | |
| TGTATCCGTGCTTCTTATGA+TGG | - | chr3_3:4710630-4710649 | Msa0439230:intron | 40.0% | |
| GTATCCGTGCTTCTTATGAT+GGG | - | chr3_3:4710631-4710650 | Msa0439230:intron | 40.0% | |
| TATCCGTGCTTCTTATGATG+GGG | - | chr3_3:4710632-4710651 | Msa0439230:intron | 40.0% | |
| GTTCTTGTCTAACAAGACAC+TGG | - | chr3_3:4710762-4710781 | Msa0439230:intron | 40.0% | |
| ! | CATGTATTAGGTGCTATCTG+TGG | - | chr3_3:4710958-4710977 | Msa0439230:CDS | 40.0% |
| ! | TGTATTAGGTGCTATCTGTG+GGG | - | chr3_3:4710960-4710979 | Msa0439230:CDS | 40.0% |
| TATACAAGCTCACCCAGATA+AGG | - | chr3_3:4710994-4711013 | Msa0439230:CDS | 40.0% | |
| TGGGAATCATAAACCTGAGA+TGG | - | chr3_3:4711063-4711082 | Msa0439230:CDS | 40.0% | |
| !!! | ACAGATTTTGAGGCTCTTTG+TGG | - | chr3_3:4711097-4711116 | Msa0439230:CDS | 40.0% |
| ATTGGAACTGTCCATCTGTT+AGG | - | chr3_3:4711480-4711499 | Msa0439230:intron | 40.0% | |
| CATGTCAATCTCATTCTCTC+TGG | - | chr3_3:4711563-4711582 | Msa0439230:intron | 40.0% | |
| !! | AGTTCTGCTGCTTTAGTTTG+AGG | - | chr3_3:4711787-4711806 | Msa0439230:CDS | 40.0% |
| TAAAGACACGTCATGTAGAG+AGG | + | chr3_3:4712147-4712166 | None:intergenic | 40.0% | |
| TTTCTGTCATTCTCCAAGAC+GGG | - | chr3_3:4712262-4712281 | Msa0439230:intron | 40.0% | |
| GCAGTATTAAAATCCCGTCT+TGG | + | chr3_3:4712278-4712297 | None:intergenic | 40.0% | |
| !!! | GTCGCCTAAACAGTCTTTTT+TGG | - | chr3_3:4712360-4712379 | Msa0439230:intron | 40.0% |
| AGCTGTGATTCATACTGTTC+CGG | - | chr3_3:4712551-4712570 | Msa0439230:intron | 40.0% | |
| TGATCAGAATGGTGAAGAGA+AGG | - | chr3_3:4712626-4712645 | Msa0439230:intron | 40.0% | |
| GAAGGTTAAACCTGTTCTAC+AGG | - | chr3_3:4712644-4712663 | Msa0439230:intron | 40.0% | |
| ! | AGAGTGTTTAGGAGAGCTTA+TGG | + | chr3_3:4713027-4713046 | None:intergenic | 40.0% |
| ! | TTCTCATTTTGCATCAGGTG+AGG | - | chr3_3:4713214-4713233 | Msa0439230:intron | 40.0% |
| TTTGACAGAAAAGGAGCTGT+TGG | - | chr3_3:4713239-4713258 | Msa0439230:intron | 40.0% | |
| CAATCACACCAATATCGGAT+GGG | + | chr3_3:4713287-4713306 | None:intergenic | 40.0% | |
| AGCTGCAATCACACCAATAT+CGG | + | chr3_3:4713292-4713311 | None:intergenic | 40.0% | |
| AACCATGTGAAACTCAATCC+TGG | - | chr3_3:4713321-4713340 | Msa0439230:CDS | 40.0% | |
| GAACCGCATGCTTATTTATC+CGG | - | chr3_3:4713369-4713388 | Msa0439230:CDS | 40.0% | |
| AACCGCATGCTTATTTATCC+GGG | - | chr3_3:4713370-4713389 | Msa0439230:CDS | 40.0% | |
| TATGAATTTGGGAGTTAGGC+CGG | + | chr3_3:4713439-4713458 | None:intergenic | 40.0% | |
| GTCGGCACATCTATGAATTT+GGG | + | chr3_3:4713450-4713469 | None:intergenic | 40.0% | |
| AGTCGGCACATCTATGAATT+TGG | + | chr3_3:4713451-4713470 | None:intergenic | 40.0% | |
| CATGCCTTAGCATAGTAATC+AGG | + | chr3_3:4713803-4713822 | None:intergenic | 40.0% | |
| AACCAACCAAGCAATCTATG+TGG | + | chr3_3:4713928-4713947 | None:intergenic | 40.0% | |
| ACATAGATTGCTTGGTTGGT+TGG | - | chr3_3:4713927-4713946 | Msa0439230:intron | 40.0% | |
| ATCTCGAATTCCTCAAATGG+CGG | + | chr3_3:4714206-4714225 | None:intergenic | 40.0% | |
| TCGATCTCGAATTCCTCAAA+TGG | + | chr3_3:4714209-4714228 | None:intergenic | 40.0% | |
| GATCGTTGTATTCTCCCAAA+AGG | - | chr3_3:4714227-4714246 | Msa0439230:CDS | 40.0% | |
| TCGTTGTATTCTCCCAAAAG+GGG | - | chr3_3:4714229-4714248 | Msa0439230:CDS | 40.0% | |
| GATGTGACCAAAAAGATGGA+CGG | + | chr3_3:4714284-4714303 | None:intergenic | 40.0% | |
| !! | TCCATCTTTTTGGTCACATC+CGG | - | chr3_3:4714284-4714303 | Msa0439230:CDS | 40.0% |
| TGTTCTGTACAGATGCAACT+CGG | + | chr3_3:4714411-4714430 | None:intergenic | 40.0% | |
| AGTTGCATCTGTACAGAACA+GGG | - | chr3_3:4714411-4714430 | Msa0439230:CDS | 40.0% | |
| GACTCTTAAGCATTCAAAGG+TGG | - | chr3_3:4714455-4714474 | Msa0439230:CDS | 40.0% | |
| !! | GAAGAGTACTTAGGTAGCTT+AGG | - | chr3_3:4714530-4714549 | Msa0439230:five_prime_UTR | 40.0% |
| !!! | GTAGTTTTCGAGTTCTTTGG+TGG | - | chr3_3:4714552-4714571 | Msa0439230:five_prime_UTR | 40.0% |
| TTGTACTTCATCCCGATTAG+TGG | - | chr3_3:4714587-4714606 | Msa0439230:five_prime_UTR | 40.0% | |
| TGTACTTCATCCCGATTAGT+GGG | - | chr3_3:4714588-4714607 | Msa0439230:five_prime_UTR | 40.0% | |
| ! | ATGGTACTGAACCCACTAAT+CGG | + | chr3_3:4714602-4714621 | None:intergenic | 40.0% |
| !! | TGGATTGGTACCCATGATTC+TGG | - | chr3_3:4710096-4710115 | Msa0439230:CDS | 45.0% |
| TGCTCAGACCAATGTGATGT+TGG | - | chr3_3:4710376-4710395 | Msa0439230:intron | 45.0% | |
| !! | CTATGTAGCACCGACATTTG+AGG | - | chr3_3:4710471-4710490 | Msa0439230:intron | 45.0% |
| TCCTAGCCAACTCCTTATCT+GGG | + | chr3_3:4711009-4711028 | None:intergenic | 45.0% | |
| ATCCTAGCCAACTCCTTATC+TGG | + | chr3_3:4711010-4711029 | None:intergenic | 45.0% | |
| !! | TTCTCTCTGGTTGAGTTGAG+AGG | - | chr3_3:4711576-4711595 | Msa0439230:intron | 45.0% |
| GACATCCGTTGTTACTCTCT+CGG | - | chr3_3:4711845-4711864 | Msa0439230:CDS | 45.0% | |
| AGGAACCGAGAGAGTAACAA+CGG | + | chr3_3:4711853-4711872 | None:intergenic | 45.0% | |
| TTATGGCAGAGAGAGATACG+CGG | + | chr3_3:4711993-4712012 | None:intergenic | 45.0% | |
| TTGCATTTGCAGCACCAACT+AGG | + | chr3_3:4712587-4712606 | None:intergenic | 45.0% | |
| !! | TGGTGCTGCAAATGCAAATC+TGG | - | chr3_3:4712590-4712609 | Msa0439230:intron | 45.0% |
| !! | ACGTGGTCTTAAGCCTTGTT+TGG | - | chr3_3:4712861-4712880 | Msa0439230:intron | 45.0% |
| !! | GAGCACTTGTGAGAGTGTTT+AGG | + | chr3_3:4713038-4713057 | None:intergenic | 45.0% |
| ! | GGTGAGGCATTTGACAGAAA+AGG | - | chr3_3:4713230-4713249 | Msa0439230:intron | 45.0% |
| GCAATCACACCAATATCGGA+TGG | + | chr3_3:4713288-4713307 | None:intergenic | 45.0% | |
| CACCAGGATTGAGTTTCACA+TGG | + | chr3_3:4713326-4713345 | None:intergenic | 45.0% | |
| ACCGCATGCTTATTTATCCG+GGG | - | chr3_3:4713371-4713390 | Msa0439230:CDS | 45.0% | |
| TCCCCGGATAAATAAGCATG+CGG | + | chr3_3:4713375-4713394 | None:intergenic | 45.0% | |
| CATGCATTCAATACACTCCC+CGG | + | chr3_3:4713391-4713410 | None:intergenic | 45.0% | |
| GTGAGCATGGAACAAAGAGT+CGG | + | chr3_3:4713468-4713487 | None:intergenic | 45.0% | |
| TTCCATGCTCACATACAAGC+AGG | - | chr3_3:4713476-4713495 | Msa0439230:intron | 45.0% | |
| TACCTGCTTGTATGTGAGCA+TGG | + | chr3_3:4713481-4713500 | None:intergenic | 45.0% | |
| CTCATGCCACATAGATTGCT+TGG | - | chr3_3:4713919-4713938 | Msa0439230:intron | 45.0% | |
| TGCCACATAGATTGCTTGGT+TGG | - | chr3_3:4713923-4713942 | Msa0439230:intron | 45.0% | |
| TCTCGAATTCCTCAAATGGC+GGG | + | chr3_3:4714205-4714224 | None:intergenic | 45.0% | |
| ! | ACACCACTGTTTCCCCTTTT+GGG | + | chr3_3:4714244-4714263 | None:intergenic | 45.0% |
| ! | AACACCACTGTTTCCCCTTT+TGG | + | chr3_3:4714245-4714264 | None:intergenic | 45.0% |
| !! | CCATCTTTTTGGTCACATCC+GGG | - | chr3_3:4714285-4714304 | Msa0439230:CDS | 45.0% |
| !! | CATCTTTTTGGTCACATCCG+GGG | - | chr3_3:4714286-4714305 | Msa0439230:CDS | 45.0% |
| !! | AGCGAAAAGAGCATCACCTT+CGG | + | chr3_3:4714354-4714373 | None:intergenic | 45.0% |
| ACGCTAATCTCTGTGTAAGC+AGG | + | chr3_3:4714377-4714396 | None:intergenic | 45.0% | |
| GAGTTGCATCTGTACAGAAC+AGG | - | chr3_3:4714410-4714429 | Msa0439230:CDS | 45.0% | |
| TTCAAAGGTGGAAGAGCTTG+TGG | - | chr3_3:4714467-4714486 | Msa0439230:CDS | 45.0% | |
| ! | TGGTACTGAACCCACTAATC+GGG | + | chr3_3:4714601-4714620 | None:intergenic | 45.0% |
| !! | TTAAACAAAAAATAAATAAA+GGG | + | chr3_3:4710405-4710424 | None:intergenic | 5.0% |
| !! | TTTAAACAAAAAATAAATAA+AGG | + | chr3_3:4710406-4710425 | None:intergenic | 5.0% |
| !!! | TTATTTATTTTTTGTTTAAA+TGG | - | chr3_3:4710406-4710425 | Msa0439230:intron | 5.0% |
| !! | AAACAAAATAAAAATAAAAA+GGG | + | chr3_3:4710889-4710908 | None:intergenic | 5.0% |
| !! | TAAACAAAATAAAAATAAAA+AGG | + | chr3_3:4710890-4710909 | None:intergenic | 5.0% |
| !!! | TTATTTTTATTTTGTTTAAA+AGG | - | chr3_3:4710892-4710911 | Msa0439230:intron | 5.0% |
| GCAACCTGTGACAATTGACC+AGG | + | chr3_3:4710015-4710034 | None:intergenic | 50.0% | |
| ! | GCACCGACATTTGAGGTTGA+AGG | - | chr3_3:4710478-4710497 | Msa0439230:intron | 50.0% |
| GCACCCCATCATAAGAAGCA+CGG | + | chr3_3:4710638-4710657 | None:intergenic | 50.0% | |
| ! | TTAGGTGCTATCTGTGGGGA+AGG | - | chr3_3:4710964-4710983 | Msa0439230:CDS | 50.0% |
| AGCTCACCCAGATAAGGAGT+TGG | - | chr3_3:4711000-4711019 | Msa0439230:CDS | 50.0% | |
| ACCCAGATAAGGAGTTGGCT+AGG | - | chr3_3:4711005-4711024 | Msa0439230:CDS | 50.0% | |
| GTCATTGCAAGAGCCATCTC+AGG | + | chr3_3:4711079-4711098 | None:intergenic | 50.0% | |
| ! | TCGGATTTCGGTCTTGTCCA+TGG | - | chr3_3:4712235-4712254 | Msa0439230:intron | 50.0% |
| CCAACTAGGTCGACAACTTC+CGG | + | chr3_3:4712573-4712592 | None:intergenic | 50.0% | |
| GTGAACACAGCCTGTAGAAC+AGG | + | chr3_3:4712657-4712676 | None:intergenic | 50.0% | |
| TCGACTGCATGAGGAAAGTG+AGG | - | chr3_3:4712734-4712753 | Msa0439230:intron | 50.0% | |
| !! | CCTGGTGAAGCATTGTTCCT+CGG | - | chr3_3:4713339-4713358 | Msa0439230:CDS | 50.0% |
| !! | CTGGTGAAGCATTGTTCCTC+GGG | - | chr3_3:4713340-4713359 | Msa0439230:CDS | 50.0% |
| !! | TGGTGAAGCATTGTTCCTCG+GGG | - | chr3_3:4713341-4713360 | Msa0439230:CDS | 50.0% |
| ! | CGGGGAGTGTATTGAATGCA+TGG | - | chr3_3:4713389-4713408 | Msa0439230:CDS | 50.0% |
| TCTGACAATGTTGTGCGAGC+CGG | - | chr3_3:4713417-4713436 | Msa0439230:CDS | 50.0% | |
| GAGACTGACATGTCCATACG+TGG | + | chr3_3:4713640-4713659 | None:intergenic | 50.0% | |
| ! | GGTTTTCCAGAGATTCTGCG+AGG | - | chr3_3:4714146-4714165 | Msa0439230:intron | 50.0% |
| TCTCCCAAAAGGGGAAACAG+TGG | - | chr3_3:4714238-4714257 | Msa0439230:CDS | 50.0% | |
| ! | TCCAGGTCCGTCCATCTTTT+TGG | - | chr3_3:4714274-4714293 | Msa0439230:CDS | 50.0% |
| ACCAAAAAGATGGACGGACC+TGG | + | chr3_3:4714278-4714297 | None:intergenic | 50.0% | |
| CCCGGATGTGACCAAAAAGA+TGG | + | chr3_3:4714288-4714307 | None:intergenic | 50.0% | |
| !! | TTTTTGGTCACATCCGGGGA+AGG | - | chr3_3:4714290-4714309 | Msa0439230:CDS | 50.0% |
| TGTGTTCATCGATCCTTCCC+CGG | + | chr3_3:4714306-4714325 | None:intergenic | 50.0% | |
| AAAGGTGGAAGAGCTTGTGG+AGG | - | chr3_3:4714470-4714489 | Msa0439230:CDS | 50.0% | |
| ! | CTTATGATGGGGTGCTCCCT+TGG | - | chr3_3:4710643-4710662 | Msa0439230:intron | 55.0% |
| ACACGTCATGTAGAGAGGCG+TGG | + | chr3_3:4712142-4712161 | None:intergenic | 55.0% | |
| CCGGAAGTTGTCGACCTAGT+TGG | - | chr3_3:4712570-4712589 | Msa0439230:intron | 55.0% | |
| CCGAGGAACAATGCTTCACC+AGG | + | chr3_3:4713342-4713361 | None:intergenic | 55.0% | |
| GACACTCCTCGCAGAATCTC+TGG | + | chr3_3:4714155-4714174 | None:intergenic | 55.0% | |
| AGGGGAAACAGTGGTGTTCC+CGG | - | chr3_3:4714247-4714266 | Msa0439230:CDS | 55.0% | |
| GGGGAAGGATCGATGAACAC+AGG | - | chr3_3:4714305-4714324 | Msa0439230:CDS | 55.0% | |
| !! | GGAGCTGTTGGTGCTGCGAT+TGG | - | chr3_3:4713251-4713270 | Msa0439230:intron | 60.0% |
| ATGGACGGACCTGGAACAGC+CGG | + | chr3_3:4714269-4714288 | None:intergenic | 60.0% | |
| CATGCGGTTCATTCGCCCCG+AGG | + | chr3_3:4713359-4713378 | None:intergenic | 65.0% | |
| GTGGTGTTCCCGGCTGTTCC+AGG | - | chr3_3:4714257-4714276 | Msa0439230:CDS | 65.0% | |
| TGGACGGACCTGGAACAGCC+GGG | + | chr3_3:4714268-4714287 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 4709635 | 4714813 | 4709635 | ID=Msa0439230;Name=Msa0439230 |
| chr3_3 | mRNA | 4709635 | 4714813 | 4709635 | ID=Msa0439230-mRNA-1;Parent=Msa0439230;Name=Msa0439230-mRNA-1;_AED=0.05;_eAED=0.05;_QI=305|1|1|1|1|1|5|350|425 |
| chr3_3 | exon | 4709635 | 4710302 | 4709635 | ID=Msa0439230-mRNA-1:exon:1059;Parent=Msa0439230-mRNA-1 |
| chr3_3 | exon | 4710951 | 4711217 | 4710951 | ID=Msa0439230-mRNA-1:exon:1058;Parent=Msa0439230-mRNA-1 |
| chr3_3 | exon | 4711693 | 4711905 | 4711693 | ID=Msa0439230-mRNA-1:exon:1057;Parent=Msa0439230-mRNA-1 |
| chr3_3 | exon | 4713313 | 4713480 | 4713313 | ID=Msa0439230-mRNA-1:exon:1056;Parent=Msa0439230-mRNA-1 |
| chr3_3 | exon | 4714197 | 4714813 | 4714197 | ID=Msa0439230-mRNA-1:exon:1055;Parent=Msa0439230-mRNA-1 |
| chr3_3 | five_prime_UTR | 4714509 | 4714813 | 4714509 | ID=Msa0439230-mRNA-1:five_prime_utr;Parent=Msa0439230-mRNA-1 |
| chr3_3 | CDS | 4714197 | 4714508 | 4714197 | ID=Msa0439230-mRNA-1:cds;Parent=Msa0439230-mRNA-1 |
| chr3_3 | CDS | 4713313 | 4713480 | 4713313 | ID=Msa0439230-mRNA-1:cds;Parent=Msa0439230-mRNA-1 |
| chr3_3 | CDS | 4711693 | 4711905 | 4711693 | ID=Msa0439230-mRNA-1:cds;Parent=Msa0439230-mRNA-1 |
| chr3_3 | CDS | 4710951 | 4711217 | 4710951 | ID=Msa0439230-mRNA-1:cds;Parent=Msa0439230-mRNA-1 |
| chr3_3 | CDS | 4709985 | 4710302 | 4709985 | ID=Msa0439230-mRNA-1:cds;Parent=Msa0439230-mRNA-1 |
| chr3_3 | three_prime_UTR | 4709635 | 4709984 | 4709635 | ID=Msa0439230-mRNA-1:three_prime_utr;Parent=Msa0439230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
