Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599900 | XP_013454565.1 | 97.800 | 409 | 8 | 1 | 21 | 428 | 1 | 409 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599900 | sp|Q9LK31|Y3272_ARATH | 62.990 | 408 | 136 | 3 | 33 | 426 | 20 | 426 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599900 | A0A072UGM8 | 97.800 | 409 | 8 | 1 | 21 | 428 | 1 | 409 | 0.0 | 828 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0599900 | 0.801471 | 8.866768e-49 | -8.615850e-47 |
| Msa0004540 | Msa0599900 | 0.817150 | 3.828150e-52 | -8.615850e-47 |
| Msa0012940 | Msa0599900 | 0.821211 | 4.554326e-53 | -8.615850e-47 |
| Msa0030280 | Msa0599900 | 0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0031820 | Msa0599900 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0033880 | Msa0599900 | 0.847743 | 9.533034e-60 | -8.615850e-47 |
| Msa0039250 | Msa0599900 | 0.807865 | 4.102348e-50 | -8.615850e-47 |
| Msa0041690 | Msa0599900 | 0.809597 | 1.749495e-50 | -8.615850e-47 |
| Msa0047250 | Msa0599900 | 0.816423 | 5.573437e-52 | -8.615850e-47 |
| Msa0055100 | Msa0599900 | 0.817768 | 2.778552e-52 | -8.615850e-47 |
| Msa0057610 | Msa0599900 | 0.825298 | 5.058518e-54 | -8.615850e-47 |
| Msa0057710 | Msa0599900 | 0.807684 | 4.480969e-50 | -8.615850e-47 |
| Msa0069600 | Msa0599900 | 0.832612 | 8.559707e-56 | -8.615850e-47 |
| Msa0077540 | Msa0599900 | 0.838410 | 2.923199e-57 | -8.615850e-47 |
| Msa0101180 | Msa0599900 | 0.824439 | 8.066038e-54 | -8.615850e-47 |
| Msa0115370 | Msa0599900 | 0.804545 | 2.052118e-49 | -8.615850e-47 |
| Msa0126770 | Msa0599900 | 0.821937 | 3.096003e-53 | -8.615850e-47 |
| Msa0126880 | Msa0599900 | 0.800497 | 1.401874e-48 | -8.615850e-47 |
| Msa0127040 | Msa0599900 | 0.810332 | 1.214951e-50 | -8.615850e-47 |
| Msa0127850 | Msa0599900 | 0.843546 | 1.310745e-58 | -8.615850e-47 |
| Msa0130240 | Msa0599900 | 0.805793 | 1.124388e-49 | -8.615850e-47 |
| Msa0133720 | Msa0599900 | 0.800501 | 1.399389e-48 | -8.615850e-47 |
| Msa0133820 | Msa0599900 | 0.813875 | 2.051000e-51 | -8.615850e-47 |
| Msa0142110 | Msa0599900 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0145150 | Msa0599900 | 0.808420 | 3.124232e-50 | -8.615850e-47 |
| Msa0147980 | Msa0599900 | 0.823359 | 1.445532e-53 | -8.615850e-47 |
| Msa0165440 | Msa0599900 | 0.811050 | 8.498319e-51 | -8.615850e-47 |
| Msa0166750 | Msa0599900 | 0.826197 | 3.095185e-54 | -8.615850e-47 |
| Msa0167480 | Msa0599900 | 0.811088 | 8.339593e-51 | -8.615850e-47 |
| Msa0171850 | Msa0599900 | 0.827512 | 1.501513e-54 | -8.615850e-47 |
| Msa0174000 | Msa0599900 | 0.857670 | 1.393407e-62 | -8.615850e-47 |
| Msa0193600 | Msa0599900 | 0.806104 | 9.672214e-50 | -8.615850e-47 |
| Msa0194560 | Msa0599900 | 0.801900 | 7.240039e-49 | -8.615850e-47 |
| Msa0198520 | Msa0599900 | 0.804932 | 1.703267e-49 | -8.615850e-47 |
| Msa0208000 | Msa0599900 | 0.821613 | 3.679490e-53 | -8.615850e-47 |
| Msa0221600 | Msa0599900 | 0.815231 | 1.027848e-51 | -8.615850e-47 |
| Msa0229940 | Msa0599900 | 0.805324 | 1.410048e-49 | -8.615850e-47 |
| Msa0383130 | Msa0599900 | 0.800313 | 1.528131e-48 | -8.615850e-47 |
| Msa0384670 | Msa0599900 | 0.846603 | 1.957809e-59 | -8.615850e-47 |
| Msa0384880 | Msa0599900 | 0.807988 | 3.861781e-50 | -8.615850e-47 |
| Msa0405650 | Msa0599900 | 0.806199 | 9.238332e-50 | -8.615850e-47 |
| Msa0431410 | Msa0599900 | 0.805133 | 1.546589e-49 | -8.615850e-47 |
| Msa0431770 | Msa0599900 | 0.816062 | 6.711570e-52 | -8.615850e-47 |
| Msa0434570 | Msa0599900 | 0.833990 | 3.882467e-56 | -8.615850e-47 |
| Msa0434770 | Msa0599900 | 0.842931 | 1.913150e-58 | -8.615850e-47 |
| Msa0436200 | Msa0599900 | 0.849730 | 2.679771e-60 | -8.615850e-47 |
| Msa0442310 | Msa0599900 | 0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0474700 | Msa0599900 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
| Msa0478580 | Msa0599900 | 0.850005 | 2.245213e-60 | -8.615850e-47 |
| Msa0241830 | Msa0599900 | 0.817143 | 3.841709e-52 | -8.615850e-47 |
| Msa0262480 | Msa0599900 | 0.836053 | 1.172431e-56 | -8.615850e-47 |
| Msa0273650 | Msa0599900 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0291520 | Msa0599900 | 0.818481 | 1.916876e-52 | -8.615850e-47 |
| Msa0300350 | Msa0599900 | 0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa0322900 | Msa0599900 | 0.825640 | 4.199477e-54 | -8.615850e-47 |
| Msa0363060 | Msa0599900 | 0.808391 | 3.169003e-50 | -8.615850e-47 |
| Msa0363810 | Msa0599900 | 0.812055 | 5.139232e-51 | -8.615850e-47 |
| Msa0484290 | Msa0599900 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
| Msa0498560 | Msa0599900 | 0.801558 | 8.507821e-49 | -8.615850e-47 |
| Msa0509120 | Msa0599900 | 0.803142 | 4.014657e-49 | -8.615850e-47 |
| Msa0510290 | Msa0599900 | 0.801000 | 1.107026e-48 | -8.615850e-47 |
| Msa0511770 | Msa0599900 | 0.810865 | 9.321375e-51 | -8.615850e-47 |
| Msa0518030 | Msa0599900 | 0.812365 | 4.398415e-51 | -8.615850e-47 |
| Msa0518960 | Msa0599900 | 0.804546 | 2.051344e-49 | -8.615850e-47 |
| Msa0524590 | Msa0599900 | 0.821861 | 3.223277e-53 | -8.615850e-47 |
| Msa0531250 | Msa0599900 | 0.832457 | 9.351185e-56 | -8.615850e-47 |
| Msa0547990 | Msa0599900 | 0.830798 | 2.396968e-55 | -8.615850e-47 |
| Msa0556010 | Msa0599900 | 0.805323 | 1.410905e-49 | -8.615850e-47 |
| Msa0561430 | Msa0599900 | 0.828953 | 6.748972e-55 | -8.615850e-47 |
| Msa0578090 | Msa0599900 | 0.825997 | 3.454200e-54 | -8.615850e-47 |
| Msa0581690 | Msa0599900 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0583500 | Msa0599900 | 0.834565 | 2.784480e-56 | -8.615850e-47 |
| Msa0584550 | Msa0599900 | 0.805323 | 1.410833e-49 | -8.615850e-47 |
| Msa0586850 | Msa0599900 | 0.809578 | 1.765199e-50 | -8.615850e-47 |
| Msa0588090 | Msa0599900 | 0.805627 | 1.218565e-49 | -8.615850e-47 |
| Msa0593700 | Msa0599900 | 0.831190 | 1.921011e-55 | -8.615850e-47 |
| Msa0599900 | Msa0606810 | 0.815984 | 6.985126e-52 | -8.615850e-47 |
| Msa0599900 | Msa0610090 | 0.810855 | 9.366629e-51 | -8.615850e-47 |
| Msa0599900 | Msa0625790 | 0.806102 | 9.684028e-50 | -8.615850e-47 |
| Msa0599900 | Msa0628420 | 0.822920 | 1.829365e-53 | -8.615850e-47 |
| Msa0599900 | Msa0633570 | 0.824946 | 6.128459e-54 | -8.615850e-47 |
| Msa0599900 | Msa0644030 | 0.828595 | 8.236348e-55 | -8.615850e-47 |
| Msa0599900 | Msa0647430 | 0.815927 | 7.194842e-52 | -8.615850e-47 |
| Msa0599900 | Msa0654870 | 0.803471 | 3.432196e-49 | -8.615850e-47 |
| Msa0599900 | Msa0658480 | 0.820734 | 5.866184e-53 | -8.615850e-47 |
| Msa0599900 | Msa0659990 | 0.831690 | 1.446953e-55 | -8.615850e-47 |
| Msa0599900 | Msa0662630 | 0.804072 | 2.573947e-49 | -8.615850e-47 |
| Msa0599900 | Msa0664760 | 0.806412 | 8.329505e-50 | -8.615850e-47 |
| Msa0599900 | Msa0666230 | 0.801113 | 1.049507e-48 | -8.615850e-47 |
| Msa0599900 | Msa0679100 | 0.817924 | 2.562310e-52 | -8.615850e-47 |
| Msa0599900 | Msa0687230 | 0.833344 | 5.629936e-56 | -8.615850e-47 |
| Msa0599900 | Msa0705000 | 0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0599900 | Msa0705040 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0599900 | Msa0707390 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0599900 | Msa0716410 | 0.810605 | 1.060577e-50 | -8.615850e-47 |
| Msa0599900 | Msa0744100 | 0.802241 | 6.158449e-49 | -8.615850e-47 |
| Msa0599900 | Msa0756930 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
| Msa0599900 | Msa0799000 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
| Msa0599900 | Msa0818770 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0599900 | Msa0819540 | 0.827218 | 1.766748e-54 | -8.615850e-47 |
| Msa0599900 | Msa0825270 | 0.814847 | 1.250506e-51 | -8.615850e-47 |
| Msa0599900 | Msa0826510 | 0.823752 | 1.169754e-53 | -8.615850e-47 |
| Msa0599900 | Msa0865620 | 0.818623 | 1.779595e-52 | -8.615850e-47 |
| Msa0599900 | Msa0869010 | 0.809596 | 1.749850e-50 | -8.615850e-47 |
| Msa0599900 | Msa0879850 | 0.824563 | 7.544151e-54 | -8.615850e-47 |
| Msa0599900 | Msa0888940 | 0.814236 | 1.707065e-51 | -8.615850e-47 |
| Msa0599900 | Msa0928120 | 0.808010 | 3.821476e-50 | -8.615850e-47 |
| Msa0599900 | Msa0943170 | 0.816571 | 5.162315e-52 | -8.615850e-47 |
| Msa0599900 | Msa0963020 | 0.830453 | 2.912350e-55 | -8.615850e-47 |
| Msa0599900 | Msa0980940 | 0.829443 | 5.132965e-55 | -8.615850e-47 |
| Msa0599900 | Msa0981430 | 0.806219 | 9.149478e-50 | -8.615850e-47 |
| Msa0599900 | Msa1004420 | 0.800123 | 1.670372e-48 | -8.615850e-47 |
| Msa0599900 | Msa1010460 | 0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0599900 | Msa1027250 | 0.817944 | 2.535161e-52 | -8.615850e-47 |
| Msa0599900 | Msa1027360 | 0.811444 | 6.979308e-51 | -8.615850e-47 |
| Msa0599900 | Msa1042480 | 0.808003 | 3.833287e-50 | -8.615850e-47 |
| Msa0599900 | Msa1044430 | 0.886311 | 3.819502e-72 | -8.615850e-47 |
| Msa0599900 | Msa1070390 | 0.826323 | 2.888748e-54 | -8.615850e-47 |
| Msa0599900 | Msa1071660 | 0.802529 | 5.371701e-49 | -8.615850e-47 |
| Msa0599900 | Msa1076560 | 0.812847 | 3.449814e-51 | -8.615850e-47 |
| Msa0599900 | Msa1083880 | 0.853248 | 2.709583e-61 | -8.615850e-47 |
| Msa0599900 | Msa1113590 | 0.817386 | 3.388491e-52 | -8.615850e-47 |
| Msa0599900 | Msa1114040 | 0.812216 | 4.740748e-51 | -8.615850e-47 |
| Msa0599900 | Msa1123350 | 0.807190 | 5.705695e-50 | -8.615850e-47 |
| Msa0599900 | Msa1127540 | 0.840228 | 9.865938e-58 | -8.615850e-47 |
| Msa0599900 | Msa1145240 | 0.803953 | 2.725537e-49 | -8.615850e-47 |
| Msa0599900 | Msa1158230 | 0.806006 | 1.014368e-49 | -8.615850e-47 |
| Msa0599900 | Msa1158770 | 0.801767 | 7.710149e-49 | -8.615850e-47 |
| Msa0599900 | Msa1166870 | 0.810276 | 1.249008e-50 | -8.615850e-47 |
| Msa0599900 | Msa1169720 | 0.801909 | 7.208430e-49 | -8.615850e-47 |
| Msa0599900 | Msa1173900 | 0.817154 | 3.819405e-52 | -8.615850e-47 |
| Msa0599900 | Msa1184370 | 0.811290 | 7.540290e-51 | -8.615850e-47 |
| Msa0599900 | Msa1188560 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0599900 | Msa1199290 | 0.804604 | 1.994532e-49 | -8.615850e-47 |
| Msa0599900 | Msa1201640 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
| Msa0599900 | Msa1201830 | 0.844466 | 7.427986e-59 | -8.615850e-47 |
| Msa0599900 | Msa1202580 | 0.830600 | 2.681178e-55 | -8.615850e-47 |
| Msa0599900 | Msa1205850 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0599900 | Msa1206650 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0599900 | Msa1207730 | 0.837292 | 5.664219e-57 | -8.615850e-47 |
| Msa0599900 | Msa1213810 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0599900 | Msa1214320 | 0.825735 | 3.985620e-54 | -8.615850e-47 |
| Msa0599900 | Msa1223330 | 0.831465 | 1.644360e-55 | -8.615850e-47 |
| Msa0599900 | Msa1227690 | 0.836764 | 7.727461e-57 | -8.615850e-47 |
| Msa0599900 | Msa1235250 | 0.811025 | 8.605791e-51 | -8.615850e-47 |
| Msa0599900 | Msa1242640 | 0.805270 | 1.447343e-49 | -8.615850e-47 |
| Msa0599900 | Msa1253810 | 0.806951 | 6.409490e-50 | -8.615850e-47 |
| Msa0599900 | Msa1256770 | 0.812345 | 4.442462e-51 | -8.615850e-47 |
| Msa0599900 | Msa1261070 | 0.824805 | 6.616528e-54 | -8.615850e-47 |
| Msa0599900 | Msa1271580 | 0.801405 | 9.144986e-49 | -8.615850e-47 |
| Msa0599900 | Msa1294840 | 0.830424 | 2.959309e-55 | -8.615850e-47 |
| Msa0599900 | Msa1294960 | 0.814698 | 1.349273e-51 | -8.615850e-47 |
| Msa0599900 | Msa1297800 | 0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0599900 | Msa1299700 | 0.821306 | 4.331529e-53 | -8.615850e-47 |
| Msa0599900 | Msa1310690 | 0.826909 | 2.094102e-54 | -8.615850e-47 |
| Msa0599900 | Msa1318620 | 0.825162 | 5.447362e-54 | -8.615850e-47 |
| Msa0599900 | Msa1329450 | 0.818919 | 1.524524e-52 | -8.615850e-47 |
| Msa0599900 | Msa1333970 | 0.833356 | 5.589385e-56 | -8.615850e-47 |
| Msa0599900 | Msa1344310 | 0.822946 | 1.804805e-53 | -8.615850e-47 |
| Msa0599900 | Msa1356610 | 0.809707 | 1.656134e-50 | -8.615850e-47 |
| Msa0599900 | Msa1373820 | 0.840012 | 1.123074e-57 | -8.615850e-47 |
| Msa0599900 | Msa1380970 | 0.802375 | 5.780699e-49 | -8.615850e-47 |
| Msa0599900 | Msa1411950 | 0.854933 | 8.845729e-62 | -8.615850e-47 |
| Msa0599900 | Msa1432480 | 0.814621 | 1.403809e-51 | -8.615850e-47 |
| Msa0599900 | Msa1433600 | 0.805124 | 1.552978e-49 | -8.615850e-47 |
| Msa0599900 | Msa1438450 | 0.803228 | 3.852949e-49 | -8.615850e-47 |
| Msa0599900 | Msa1443930 | 0.808489 | 3.019689e-50 | -8.615850e-47 |
| Msa0599900 | Msa1459910 | 0.819948 | 8.881858e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599900 | MtrunA17_Chr4g0002161 | 97.800 | 409 | 8 | 1 | 21 | 428 | 1 | 409 | 0.0 | 828 |
| Msa0599900 | MtrunA17_Chr7g0230061 | 69.554 | 404 | 117 | 3 | 30 | 427 | 15 | 418 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599900 | AT1G51540.1 | 74.447 | 407 | 89 | 4 | 33 | 427 | 11 | 414 | 0.0 | 637 |
| Msa0599900 | AT3G27220.1 | 62.990 | 408 | 136 | 3 | 33 | 426 | 20 | 426 | 0.0 | 545 |
Find 105 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAACTCTAGTTGGATTT+TGG | 0.130657 | 4_2:-40168076 | Msa0599900:CDS |
| GTGATCTGCGTCGGACTTCT+AGG | 0.209800 | 4_2:-40172609 | Msa0599900:CDS |
| AATGATCGTCTTTATGTTCT+TGG | 0.209886 | 4_2:-40169383 | Msa0599900:CDS |
| GAAATGGCACATTCACATTT+AGG | 0.243377 | 4_2:-40170831 | Msa0599900:CDS |
| TCAATATGTGAGTTAGGTTT+TGG | 0.275127 | 4_2:+40169107 | None:intergenic |
| GAAATTGGAACGAGGGAAAT+AGG | 0.276239 | 4_2:+40172539 | None:intergenic |
| CTTCACCTTTGCTGCAATTT+CGG | 0.276741 | 4_2:+40167894 | None:intergenic |
| AACAATTCCATTGTTATTGC+TGG | 0.285172 | 4_2:-40169065 | Msa0599900:CDS |
| ACCTGCTCCTCAACTTGTTT+GGG | 0.304175 | 4_2:-40172430 | Msa0599900:CDS |
| GCAAATTCAATATGTGAGTT+AGG | 0.307916 | 4_2:+40169101 | None:intergenic |
| AAAACTCGGTTCAGCCAAAT+TGG | 0.314857 | 4_2:-40172634 | Msa0599900:CDS |
| TACCTGCTCCTCAACTTGTT+TGG | 0.320322 | 4_2:-40172431 | Msa0599900:CDS |
| CCAAAGTATTCAAGTTAAAC+TGG | 0.328184 | 4_2:+40168985 | None:intergenic |
| GATATATAAATAGTATAAAC+AGG | 0.330436 | 4_2:+40167607 | None:intergenic |
| ACCGCTCCATTGCTTTGTTT+CGG | 0.343075 | 4_2:+40170716 | None:intergenic |
| TGTGAATGTGCCATTTCTTT+TGG | 0.343344 | 4_2:+40170837 | None:intergenic |
| GCACCCTGAAACCAAGAAAA+TGG | 0.346126 | 4_2:-40169027 | Msa0599900:CDS |
| TCACCTGTTCCTAGACTTGA+TGG | 0.347002 | 4_2:-40172393 | Msa0599900:CDS |
| GACGCAGATCACAACCAATT+TGG | 0.352455 | 4_2:+40172620 | None:intergenic |
| TTTGAAGATGTGATGAATAA+TGG | 0.362293 | 4_2:-40173017 | None:intergenic |
| GGCTGGTTGTACTTCACTTC+AGG | 0.372763 | 4_2:-40168050 | Msa0599900:CDS |
| CCTCTCCAAAGTTGAGTTGC+CGG | 0.377037 | 4_2:+40169796 | None:intergenic |
| TGACATCCACACAAACAGTT+AGG | 0.384286 | 4_2:-40167696 | Msa0599900:three_prime_UTR |
| TATATAGTCAATGGGCAGTA+TGG | 0.395192 | 4_2:-40170783 | Msa0599900:CDS |
| ATAAAGAATATGTAATATAT+CGG | 0.437907 | 4_2:+40167868 | None:intergenic |
| TCCCAAACAAGTTGAGGAGC+AGG | 0.438279 | 4_2:+40172429 | None:intergenic |
| GTGAGGTCCTCCACGGGGAA+TGG | 0.439679 | 4_2:+40169657 | None:intergenic |
| CCAGTTTAACTTGAATACTT+TGG | 0.440901 | 4_2:-40168985 | Msa0599900:intron |
| TGAGGTCCTCCACGGGGAAT+GGG | 0.456202 | 4_2:+40169658 | None:intergenic |
| AGATACATTTATATAGTCAA+TGG | 0.456594 | 4_2:-40170792 | Msa0599900:CDS |
| AATTCAGTATTCACTGAGAA+TGG | 0.458255 | 4_2:-40167824 | Msa0599900:three_prime_UTR |
| TATGTTCTTGGTGGTCAAGA+AGG | 0.468117 | 4_2:-40169371 | Msa0599900:CDS |
| TGGAGTCTTGCTGTCAAGAA+TGG | 0.473803 | 4_2:-40169715 | Msa0599900:CDS |
| TGAAGAAGCCCATAGAAAAT+CGG | 0.474601 | 4_2:+40172572 | None:intergenic |
| CGGGTGAAAACAACTCTAGT+TGG | 0.475974 | 4_2:-40168083 | Msa0599900:CDS |
| GATCGTCTTTATGTTCTTGG+TGG | 0.479295 | 4_2:-40169380 | Msa0599900:CDS |
| ATGCACCGGCAACTCAACTT+TGG | 0.480966 | 4_2:-40169801 | Msa0599900:CDS |
| AAGAACATAAAGACGATCAT+TGG | 0.484359 | 4_2:+40169385 | None:intergenic |
| TCATCCAACATGTAAACATC+AGG | 0.495238 | 4_2:+40169161 | None:intergenic |
| TCCCTCCTTTGCCAGTCCCT+AGG | 0.504174 | 4_2:-40170692 | Msa0599900:intron |
| GTTAGTTACATTATTAATGT+CGG | 0.505269 | 4_2:+40172323 | None:intergenic |
| CACCACCCTAACTGTTTGTG+TGG | 0.510534 | 4_2:+40167690 | None:intergenic |
| GATACATTTATATAGTCAAT+GGG | 0.516300 | 4_2:-40170791 | Msa0599900:CDS |
| AGGTGGGACCTCTACATTGT+GGG | 0.517328 | 4_2:+40170760 | None:intergenic |
| GCACCATCAAGTCTAGGAAC+AGG | 0.519537 | 4_2:+40172390 | None:intergenic |
| GAGAGGTCGATTGCATGTAA+TGG | 0.523115 | 4_2:-40169779 | Msa0599900:CDS |
| GAATGACATGGTTCGTCCGT+CGG | 0.523631 | 4_2:-40172658 | Msa0599900:CDS |
| AGAGGTCGATTGCATGTAAT+GGG | 0.523894 | 4_2:-40169778 | Msa0599900:CDS |
| ACTCACATATTGAATTTGCA+TGG | 0.526283 | 4_2:-40169097 | Msa0599900:CDS |
| GAATGGAAAAGCATTAGAAA+AGG | 0.526434 | 4_2:-40169698 | Msa0599900:CDS |
| AGACTCCAATGTTCTAATCC+AGG | 0.535412 | 4_2:+40169730 | None:intergenic |
| CATTTAGGAATGGCGACAGA+TGG | 0.535771 | 4_2:-40170816 | Msa0599900:CDS |
| TTGCAGAAGTGGTCTGTGAT+CGG | 0.535945 | 4_2:-40168119 | Msa0599900:intron |
| GAAAAGCATTAGAAAAGGAG+TGG | 0.542116 | 4_2:-40169693 | Msa0599900:CDS |
| TTCTTTAGGAACAATGATTG+TGG | 0.544550 | 4_2:+40172509 | None:intergenic |
| AAAAGGTCGTTGGAGATATG+TGG | 0.550995 | 4_2:-40167992 | Msa0599900:CDS |
| GACATCCACACAAACAGTTA+GGG | 0.552339 | 4_2:-40167695 | Msa0599900:three_prime_UTR |
| GAACCTGTGAGGTCCTCCAC+GGG | 0.554212 | 4_2:+40169651 | None:intergenic |
| TTCCCCGTGGAGGACCTCAC+AGG | 0.556102 | 4_2:-40169654 | Msa0599900:intron |
| CTCACATATTGAATTTGCAT+GGG | 0.556407 | 4_2:-40169096 | Msa0599900:CDS |
| ACTCAATTTCAGATATGCAC+CGG | 0.558589 | 4_2:-40169815 | Msa0599900:intron |
| TGATCGGAAAGTTACCATAC+CGG | 0.559582 | 4_2:-40168103 | Msa0599900:CDS |
| GAACGAGGGAAATAGGAAGA+TGG | 0.564903 | 4_2:+40172546 | None:intergenic |
| GGCACATTCACATTTAGGAA+TGG | 0.569145 | 4_2:-40170826 | Msa0599900:CDS |
| ACTATCCGAAATTGCAGCAA+AGG | 0.573644 | 4_2:-40167899 | Msa0599900:three_prime_UTR |
| TTTGATGATGGAACTTGGGG+AGG | 0.574262 | 4_2:-40170873 | Msa0599900:CDS |
| AATTCCATTGTTATTGCTGG+AGG | 0.576103 | 4_2:-40169062 | Msa0599900:CDS |
| ATATATACATACCTAGGGAC+TGG | 0.577408 | 4_2:+40170681 | None:intergenic |
| CTATCCTGATGTTTACATGT+TGG | 0.581139 | 4_2:-40169165 | Msa0599900:CDS |
| ATACACCTGGATTAGAACAT+TGG | 0.581948 | 4_2:-40169735 | Msa0599900:CDS |
| TACCTAGGGACTGGCAAAGG+AGG | 0.586983 | 4_2:+40170690 | None:intergenic |
| TGTTTCGGTGTCAAGTACAA+AGG | 0.589819 | 4_2:+40170731 | None:intergenic |
| GTTCGTCCGTCGGTAAAACT+CGG | 0.592046 | 4_2:-40172648 | Msa0599900:CDS |
| AAATTGGTTGTGATCTGCGT+CGG | 0.599739 | 4_2:-40172618 | Msa0599900:CDS |
| AAATTGCAGCAAAGGTGAAG+AGG | 0.599908 | 4_2:-40167891 | Msa0599900:three_prime_UTR |
| ATAGCAGCACCATCAAGTCT+AGG | 0.602814 | 4_2:+40172384 | None:intergenic |
| ACGATCATTGGCCACAACAC+AGG | 0.602958 | 4_2:+40169397 | None:intergenic |
| TATTCTTCAGATTCTAACGA+CGG | 0.609525 | 4_2:-40172685 | Msa0599900:intron |
| CACTTCAGGACAGAGAGACA+AGG | 0.609550 | 4_2:-40168036 | Msa0599900:CDS |
| AAGTACAAAGGTATCAGAGG+TGG | 0.611306 | 4_2:+40170743 | None:intergenic |
| ACCTAGGGACTGGCAAAGGA+GGG | 0.612823 | 4_2:+40170691 | None:intergenic |
| ACATACCTAGGGACTGGCAA+AGG | 0.618922 | 4_2:+40170687 | None:intergenic |
| TAAGTGCTCACGCAGGATGG+AGG | 0.622842 | 4_2:-40169315 | Msa0599900:intron |
| CGAACCTGTGAGGTCCTCCA+CGG | 0.624364 | 4_2:+40169650 | None:intergenic |
| CAGTATGGCCCACAATGTAG+AGG | 0.627150 | 4_2:-40170768 | Msa0599900:CDS |
| TGTTGGATGACGAGATGAAG+TGG | 0.632038 | 4_2:-40169148 | Msa0599900:CDS |
| GTCAAGTACAAAGGTATCAG+AGG | 0.634465 | 4_2:+40170740 | None:intergenic |
| GATCGGAAAGTTACCATACC+GGG | 0.637162 | 4_2:-40168102 | Msa0599900:CDS |
| AAAGAGAATCGACATACACC+TGG | 0.643815 | 4_2:-40169748 | Msa0599900:CDS |
| TTGACACCGAAACAAAGCAA+TGG | 0.649372 | 4_2:-40170722 | Msa0599900:CDS |
| AGTACAAAGGTATCAGAGGT+GGG | 0.650373 | 4_2:+40170744 | None:intergenic |
| TCTTCAGATTCTAACGACGG+TGG | 0.651995 | 4_2:-40172682 | Msa0599900:intron |
| GAGGTGGGACCTCTACATTG+TGG | 0.657473 | 4_2:+40170759 | None:intergenic |
| ATATATAAATAGTATAAACA+GGG | 0.659834 | 4_2:+40167608 | None:intergenic |
| ATCCACACAAACAGTTAGGG+TGG | 0.660165 | 4_2:-40167692 | Msa0599900:three_prime_UTR |
| ACCGAAACAAAGCAATGGAG+CGG | 0.665583 | 4_2:-40170717 | Msa0599900:CDS |
| ACTTCAGGACAGAGAGACAA+GGG | 0.669595 | 4_2:-40168035 | Msa0599900:CDS |
| TGTGCCTCCAGCAATAACAA+TGG | 0.669691 | 4_2:+40169058 | None:intergenic |
| GGTCGATTGCATGTAATGGG+TGG | 0.672590 | 4_2:-40169775 | Msa0599900:CDS |
| CCGGCAACTCAACTTTGGAG+AGG | 0.698757 | 4_2:-40169796 | Msa0599900:CDS |
| AACGACGGTGGTGAATGACA+TGG | 0.711579 | 4_2:-40172670 | Msa0599900:CDS |
| GAGATACCCATTCCCCGTGG+AGG | 0.712935 | 4_2:-40169664 | Msa0599900:CDS |
| TATTAAGCAACGAACCTGTG+AGG | 0.715011 | 4_2:+40169640 | None:intergenic |
| AGTGAGATACCCATTCCCCG+TGG | 0.747527 | 4_2:-40169667 | Msa0599900:CDS |
| AACCTGTGAGGTCCTCCACG+GGG | 0.758262 | 4_2:+40169652 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATAAATAAAGATTAAAA+TGG | + | chr4_2:40171091-40171110 | None:intergenic | 10.0% |
| !!! | ATAGAAATATTAAATTTTGA+AGG | + | chr4_2:40172209-40172228 | None:intergenic | 10.0% |
| !! | ATAAAGAATATGTAATATAT+CGG | + | chr4_2:40172722-40172741 | None:intergenic | 10.0% |
| !! | ATATATAAATAGTATAAACA+GGG | + | chr4_2:40172982-40173001 | None:intergenic | 10.0% |
| !!! | GATATATATAATTTTGATGA+TGG | - | chr4_2:40169702-40169721 | Msa0599900:CDS | 15.0% |
| !!! | TAGTTCTAATCAATATTTTA+TGG | + | chr4_2:40171064-40171083 | None:intergenic | 15.0% |
| !! | AATTAAAAATTGTAAAACCT+GGG | + | chr4_2:40171908-40171927 | None:intergenic | 15.0% |
| !! | ATAAATATAGTAAGATGATT+AGG | - | chr4_2:40171943-40171962 | Msa0599900:intron | 15.0% |
| !! | GATATATAAATAGTATAAAC+AGG | + | chr4_2:40172983-40173002 | None:intergenic | 15.0% |
| !!! | TTCTTTTGTTCTTTTTCTTT+AGG | + | chr4_2:40168095-40168114 | None:intergenic | 20.0% |
| !! | GTTAGTTACATTATTAATGT+CGG | + | chr4_2:40168267-40168286 | None:intergenic | 20.0% |
| !! | ATAGTTAATTACAATTAGTG+TGG | - | chr4_2:40168458-40168477 | Msa0599900:intron | 20.0% |
| !! | TAGTTAATTACAATTAGTGT+GGG | - | chr4_2:40168459-40168478 | Msa0599900:intron | 20.0% |
| !!! | ATTTTGATAAATAGCTTAGT+TGG | - | chr4_2:40168832-40168851 | Msa0599900:intron | 20.0% |
| !!! | TTTTGATAAATAGCTTAGTT+GGG | - | chr4_2:40168833-40168852 | Msa0599900:intron | 20.0% |
| !! | CTATAGTTAATGAGAAAATA+TGG | - | chr4_2:40168891-40168910 | Msa0599900:intron | 20.0% |
| !!! | TTGTTTTCATTTAAGCTATA+AGG | - | chr4_2:40168919-40168938 | Msa0599900:intron | 20.0% |
| !! | TTATATACAACAAACACTTA+AGG | + | chr4_2:40169104-40169123 | None:intergenic | 20.0% |
| !!! | TTAAGTGTTTGTTGTATATA+AGG | - | chr4_2:40169103-40169122 | Msa0599900:CDS | 20.0% |
| !!! | TAAGTGTTTGTTGTATATAA+GGG | - | chr4_2:40169104-40169123 | Msa0599900:CDS | 20.0% |
| !! | AAATAAAATCTTGTTCGAAA+CGG | + | chr4_2:40169329-40169348 | None:intergenic | 20.0% |
| !! | GTGTTTAAAAGAACTTATAT+GGG | + | chr4_2:40169630-40169649 | None:intergenic | 20.0% |
| !!! | GTTATATTATTGTGTTTTTC+AGG | - | chr4_2:40169665-40169684 | Msa0599900:CDS | 20.0% |
| !! | AGATACATTTATATAGTCAA+TGG | - | chr4_2:40169795-40169814 | Msa0599900:CDS | 20.0% |
| !! | GATACATTTATATAGTCAAT+GGG | - | chr4_2:40169796-40169815 | Msa0599900:CDS | 20.0% |
| !! | TTTCTGATATTTCATTGTAA+TGG | - | chr4_2:40169986-40170005 | Msa0599900:intron | 20.0% |
| !!! | AATGTAATTTTTCTTGTATC+TGG | - | chr4_2:40170718-40170737 | Msa0599900:CDS | 20.0% |
| !!! | ACTGATAAACATCATATTTT+AGG | - | chr4_2:40171166-40171185 | Msa0599900:intron | 20.0% |
| !!! | CTGATAAACATCATATTTTA+GGG | - | chr4_2:40171167-40171186 | Msa0599900:intron | 20.0% |
| !!! | TTTTTTCTTCGAATTATTAC+TGG | - | chr4_2:40171813-40171832 | Msa0599900:intron | 20.0% |
| !! | CAATTAAAAATTGTAAAACC+TGG | + | chr4_2:40171909-40171928 | None:intergenic | 20.0% |
| !!! | GTTTTACAATTTTTAATTGC+TGG | - | chr4_2:40171910-40171929 | Msa0599900:intron | 20.0% |
| !!! | AAATTTTGAAATTGGAACGA+GGG | + | chr4_2:40168058-40168077 | None:intergenic | 25.0% |
| !!! | GATTGTGGAAATTTTGAAAT+TGG | + | chr4_2:40168066-40168085 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCAAGAGTTTAG+CGG | - | chr4_2:40168313-40168332 | Msa0599900:intron | 25.0% |
| !! | TCTAAGACATTTGATATGTT+GGG | + | chr4_2:40168396-40168415 | None:intergenic | 25.0% |
| !!! | TTCTAAGACATTTGATATGT+TGG | + | chr4_2:40168397-40168416 | None:intergenic | 25.0% |
| !!! | TTGGATATTCTAGTTACTTT+TGG | + | chr4_2:40168504-40168523 | None:intergenic | 25.0% |
| !! | CAGTTAAAATAGTTTCAAGT+TGG | + | chr4_2:40168523-40168542 | None:intergenic | 25.0% |
| !! | ATTTTAAATGTGGAAAAGTG+GGG | + | chr4_2:40168620-40168639 | None:intergenic | 25.0% |
| !! | CATTTTAAATGTGGAAAAGT+GGG | + | chr4_2:40168621-40168640 | None:intergenic | 25.0% |
| !! | ACATTTTAAATGTGGAAAAG+TGG | + | chr4_2:40168622-40168641 | None:intergenic | 25.0% |
| !!! | ACTTTTCCACATTTAAAATG+TGG | - | chr4_2:40168621-40168640 | Msa0599900:intron | 25.0% |
| !!! | CTTTTCCACATTTAAAATGT+GGG | - | chr4_2:40168622-40168641 | Msa0599900:intron | 25.0% |
| ! | TATCAACTGAGTTGTATTTA+CGG | - | chr4_2:40168717-40168736 | Msa0599900:intron | 25.0% |
| ! | TTTGATGTATAGCTTAGTTA+AGG | - | chr4_2:40168790-40168809 | Msa0599900:intron | 25.0% |
| ! | AGTTAAGGACTTATTGAATA+AGG | - | chr4_2:40168805-40168824 | Msa0599900:intron | 25.0% |
| ! | GTTAAGGACTTATTGAATAA+GGG | - | chr4_2:40168806-40168825 | Msa0599900:intron | 25.0% |
| ! | TTGGGTGTTTATTATATAAG+TGG | - | chr4_2:40168851-40168870 | Msa0599900:intron | 25.0% |
| ! | AATTAGCTGGAAACAATATA+TGG | - | chr4_2:40168975-40168994 | Msa0599900:intron | 25.0% |
| ! | ATAACATGTATTAGAAATCG+TGG | - | chr4_2:40169136-40169155 | Msa0599900:CDS | 25.0% |
| ! | CGTGTTTAAAAGAACTTATA+TGG | + | chr4_2:40169631-40169650 | None:intergenic | 25.0% |
| !!! | ATAATTTTGATGATGGAACT+TGG | - | chr4_2:40169709-40169728 | Msa0599900:CDS | 25.0% |
| !!! | TAATTTTGATGATGGAACTT+GGG | - | chr4_2:40169710-40169729 | Msa0599900:CDS | 25.0% |
| ! | CATTCATATATACATACCTA+GGG | + | chr4_2:40169914-40169933 | None:intergenic | 25.0% |
| ! | ACATTCATATATACATACCT+AGG | + | chr4_2:40169915-40169934 | None:intergenic | 25.0% |
| ! | CAACATAAAGAGCTATAAAA+TGG | + | chr4_2:40170071-40170090 | None:intergenic | 25.0% |
| !!! | ACTAGCATATTTTAGTCATT+AGG | - | chr4_2:40170125-40170144 | Msa0599900:intron | 25.0% |
| ! | TTGAAGTTTCAAAGAAGTTA+TGG | - | chr4_2:40170280-40170299 | Msa0599900:intron | 25.0% |
| ! | TGAAGTTTCAAAGAAGTTAT+GGG | - | chr4_2:40170281-40170300 | Msa0599900:intron | 25.0% |
| !!! | ATTTTTCTTGTATCTGGTTT+TGG | - | chr4_2:40170724-40170743 | Msa0599900:CDS | 25.0% |
| !!! | TTTTTCTTGTATCTGGTTTT+GGG | - | chr4_2:40170725-40170744 | Msa0599900:CDS | 25.0% |
| !! | GACATATACATCATACATTT+TGG | + | chr4_2:40171132-40171151 | None:intergenic | 25.0% |
| !!! | ACCAAGAAAATGGTTTTAAA+CGG | - | chr4_2:40171570-40171589 | Msa0599900:intron | 25.0% |
| !! | GAATGCAAGTTTTTATGTTA+AGG | - | chr4_2:40172044-40172063 | Msa0599900:intron | 25.0% |
| !! | AGTTTTTATGTTAAGGTTCT+TGG | - | chr4_2:40172051-40172070 | Msa0599900:intron | 25.0% |
| !! | GTTTTTATGTTAAGGTTCTT+GGG | - | chr4_2:40172052-40172071 | Msa0599900:intron | 25.0% |
| ! | AGCTATGACATTTCATTAAA+TGG | + | chr4_2:40172104-40172123 | None:intergenic | 25.0% |
| !! | TGTTATTAATTTTGCAGAAG+TGG | - | chr4_2:40172457-40172476 | Msa0599900:CDS | 25.0% |
| !! | GTAAATCTGTCTTTTGTATA+AGG | + | chr4_2:40172822-40172841 | None:intergenic | 25.0% |
| !! | CAATGTCTTTTACAAAGTAA+AGG | + | chr4_2:40172873-40172892 | None:intergenic | 25.0% |
| TATTCTTCAGATTCTAACGA+CGG | - | chr4_2:40167902-40167921 | Msa0599900:three_prime_UTR | 30.0% | |
| !!! | GAAATTTTGAAATTGGAACG+AGG | + | chr4_2:40168059-40168078 | None:intergenic | 30.0% |
| ! | TTCTTTAGGAACAATGATTG+TGG | + | chr4_2:40168081-40168100 | None:intergenic | 30.0% |
| !! | AATCTTTTCTTCGTTTTTGC+TGG | - | chr4_2:40168236-40168255 | Msa0599900:intron | 30.0% |
| ACATACTAATTGATCAGAAG+TGG | - | chr4_2:40168346-40168365 | Msa0599900:intron | 30.0% | |
| CATACTAATTGATCAGAAGT+GGG | - | chr4_2:40168347-40168366 | Msa0599900:intron | 30.0% | |
| ATACTAATTGATCAGAAGTG+GGG | - | chr4_2:40168348-40168367 | Msa0599900:intron | 30.0% | |
| AGACATTGCATAATATATGC+AGG | - | chr4_2:40168570-40168589 | Msa0599900:intron | 30.0% | |
| GACATTGCATAATATATGCA+GGG | - | chr4_2:40168571-40168590 | Msa0599900:intron | 30.0% | |
| ACATTGCATAATATATGCAG+GGG | - | chr4_2:40168572-40168591 | Msa0599900:intron | 30.0% | |
| !!! | TTTTTTGTAAAGTAGCCTAG+TGG | + | chr4_2:40168656-40168675 | None:intergenic | 30.0% |
| AACTTGCAACTAATCTAACT+AGG | - | chr4_2:40168689-40168708 | Msa0599900:intron | 30.0% | |
| ATCAACTGAGTTGTATTTAC+GGG | - | chr4_2:40168718-40168737 | Msa0599900:intron | 30.0% | |
| AAAACAATCCTTCAAAACGT+TGG | + | chr4_2:40168773-40168792 | None:intergenic | 30.0% | |
| !!! | TTTTTGAAGCTATTGTCAAG+AGG | - | chr4_2:40168945-40168964 | Msa0599900:intron | 30.0% |
| AAGAGGATATTGAAATTAGC+TGG | - | chr4_2:40168962-40168981 | Msa0599900:intron | 30.0% | |
| TAACAGAAGCTATTGTTGTA+TGG | - | chr4_2:40169001-40169020 | Msa0599900:CDS | 30.0% | |
| TGCTTATGAACAACTTATCT+AGG | + | chr4_2:40169068-40169087 | None:intergenic | 30.0% | |
| ATGTATTAGAAATCGTGGTT+GGG | - | chr4_2:40169141-40169160 | Msa0599900:CDS | 30.0% | |
| ! | TTCTTTTAAACACGTCTTAG+TGG | - | chr4_2:40169637-40169656 | Msa0599900:intron | 30.0% |
| !!! | AATTTTGATGATGGAACTTG+GGG | - | chr4_2:40169711-40169730 | Msa0599900:CDS | 30.0% |
| ! | TTTTGACATGCCAAAAGAAA+TGG | - | chr4_2:40169740-40169759 | Msa0599900:CDS | 30.0% |
| !! | ATAGCTCTTTATGTTGCTTT+AGG | - | chr4_2:40170075-40170094 | Msa0599900:intron | 30.0% |
| TGCTCTATCATGATATTCAA+GGG | + | chr4_2:40170181-40170200 | None:intergenic | 30.0% | |
| ! | TGATCCATTTAGTTTCAGTT+AGG | - | chr4_2:40170423-40170442 | Msa0599900:intron | 30.0% |
| GAAACCTAACTGAAACTAAA+TGG | + | chr4_2:40170430-40170449 | None:intergenic | 30.0% | |
| !! | TTCACTAGTTTGACTTTTAG+TGG | - | chr4_2:40170447-40170466 | Msa0599900:intron | 30.0% |
| GAGACATGGAATAACATTTA+AGG | - | chr4_2:40170473-40170492 | Msa0599900:intron | 30.0% | |
| AAGTGAACGATAAACAACAA+AGG | + | chr4_2:40170542-40170561 | None:intergenic | 30.0% | |
| !!! | CACTTGTCTGACTTATTTTT+TGG | - | chr4_2:40170557-40170576 | Msa0599900:intron | 30.0% |
| !! | TTTTGGCTATCAGAAAATTG+TGG | - | chr4_2:40170574-40170593 | Msa0599900:intron | 30.0% |
| ! | CTATCAGAAAATTGTGGTTT+TGG | - | chr4_2:40170580-40170599 | Msa0599900:intron | 30.0% |
| !! | GAATGGAAAAGCATTAGAAA+AGG | - | chr4_2:40170889-40170908 | Msa0599900:CDS | 30.0% |
| GTTTATCAGTAACAAATAGC+AGG | + | chr4_2:40171156-40171175 | None:intergenic | 30.0% | |
| AAGAACATAAAGACGATCAT+TGG | + | chr4_2:40171205-40171224 | None:intergenic | 30.0% | |
| AATGATCGTCTTTATGTTCT+TGG | - | chr4_2:40171204-40171223 | Msa0599900:intron | 30.0% | |
| TCATTGTTTATTGTCATGTC+AGG | - | chr4_2:40171395-40171414 | Msa0599900:intron | 30.0% | |
| ! | TCAATATGTGAGTTAGGTTT+TGG | + | chr4_2:40171483-40171502 | None:intergenic | 30.0% |
| GCAAATTCAATATGTGAGTT+AGG | + | chr4_2:40171489-40171508 | None:intergenic | 30.0% | |
| ACTCACATATTGAATTTGCA+TGG | - | chr4_2:40171490-40171509 | Msa0599900:intron | 30.0% | |
| CTCACATATTGAATTTGCAT+GGG | - | chr4_2:40171491-40171510 | Msa0599900:intron | 30.0% | |
| ! | AACAATTCCATTGTTATTGC+TGG | - | chr4_2:40171522-40171541 | Msa0599900:intron | 30.0% |
| ! | AAACCATTTTCTTGGTTTCA+GGG | + | chr4_2:40171566-40171585 | None:intergenic | 30.0% |
| ! | AAAACCATTTTCTTGGTTTC+AGG | + | chr4_2:40171567-40171586 | None:intergenic | 30.0% |
| !! | TCCGTTTAAAACCATTTTCT+TGG | + | chr4_2:40171574-40171593 | None:intergenic | 30.0% |
| ! | CCAAAGTATTCAAGTTAAAC+TGG | + | chr4_2:40171605-40171624 | None:intergenic | 30.0% |
| !! | CCAGTTTAACTTGAATACTT+TGG | - | chr4_2:40171602-40171621 | Msa0599900:intron | 30.0% |
| ACTTCTCTTATAAAGCTCTT+AGG | - | chr4_2:40171630-40171649 | Msa0599900:intron | 30.0% | |
| CATGCTGAAATAACTGAAAT+GGG | + | chr4_2:40171765-40171784 | None:intergenic | 30.0% | |
| ACATGCTGAAATAACTGAAA+TGG | + | chr4_2:40171766-40171785 | None:intergenic | 30.0% | |
| ACATAAAAACTTGCATTCAG+TGG | + | chr4_2:40172042-40172061 | None:intergenic | 30.0% | |
| TCACAATTTACACTGTGAAA+AGG | + | chr4_2:40172136-40172155 | None:intergenic | 30.0% | |
| TGAAGAACTAGACACTAAAA+AGG | + | chr4_2:40172181-40172200 | None:intergenic | 30.0% | |
| ! | GTAACTTGTGTCATAACTTA+TGG | - | chr4_2:40172232-40172251 | Msa0599900:intron | 30.0% |
| TTGCATATTGACAGCAAATA+AGG | + | chr4_2:40172279-40172298 | None:intergenic | 30.0% | |
| AATACAATCCAATTGCAAGT+AGG | - | chr4_2:40172390-40172409 | Msa0599900:CDS | 30.0% | |
| ! | AAACAACTCTAGTTGGATTT+TGG | - | chr4_2:40172511-40172530 | Msa0599900:CDS | 30.0% |
| AATTCAGTATTCACTGAGAA+TGG | - | chr4_2:40172763-40172782 | Msa0599900:intron | 30.0% | |
| !!! | AGATTTACTCACCTTTTTTG+AGG | - | chr4_2:40172834-40172853 | Msa0599900:intron | 30.0% |
| ! | TGTCTTTTACAAAGTAAAGG+AGG | + | chr4_2:40172870-40172889 | None:intergenic | 30.0% |
| AGACTTGTAGCAGAAAACTT+CGG | - | chr4_2:40167612-40167631 | Msa0599900:three_prime_UTR | 35.0% | |
| AGAGAAGTAACAACGAAGAT+GGG | - | chr4_2:40167802-40167821 | Msa0599900:three_prime_UTR | 35.0% | |
| !!! | ACTCATTGCCGATTTTCTAT+GGG | - | chr4_2:40168007-40168026 | Msa0599900:CDS | 35.0% |
| TGAAGAAGCCCATAGAAAAT+CGG | + | chr4_2:40168018-40168037 | None:intergenic | 35.0% | |
| ! | ATCTTTTCCCAAACAAGTTG+AGG | + | chr4_2:40168167-40168186 | None:intergenic | 35.0% |
| TACTAATTGATCAGAAGTGG+GGG | - | chr4_2:40168349-40168368 | Msa0599900:intron | 35.0% | |
| CAAACACTTAAGGCTACATT+TGG | + | chr4_2:40169094-40169113 | None:intergenic | 35.0% | |
| CATGTATTAGAAATCGTGGT+TGG | - | chr4_2:40169140-40169159 | Msa0599900:CDS | 35.0% | |
| TGAACAAGTGTTTGTAAGTG+GGG | + | chr4_2:40169210-40169229 | None:intergenic | 35.0% | |
| CTGAACAAGTGTTTGTAAGT+GGG | + | chr4_2:40169211-40169230 | None:intergenic | 35.0% | |
| TGTTTCTTACAAGCGTAGTT+AGG | - | chr4_2:40169257-40169276 | Msa0599900:intron | 35.0% | |
| AGTTGCTTCTAACATTGAAG+AGG | - | chr4_2:40169473-40169492 | Msa0599900:intron | 35.0% | |
| AGGAAACAATAACAAGCTCT+GGG | - | chr4_2:40169493-40169512 | Msa0599900:intron | 35.0% | |
| !!! | TGTGAATGTGCCATTTCTTT+TGG | + | chr4_2:40169753-40169772 | None:intergenic | 35.0% |
| GAAATGGCACATTCACATTT+AGG | - | chr4_2:40169756-40169775 | Msa0599900:CDS | 35.0% | |
| TATATAGTCAATGGGCAGTA+TGG | - | chr4_2:40169804-40169823 | Msa0599900:CDS | 35.0% | |
| ATATATACATACCTAGGGAC+TGG | + | chr4_2:40169909-40169928 | None:intergenic | 35.0% | |
| TACTCTCTCAAATTACCACA+CGG | - | chr4_2:40169942-40169961 | Msa0599900:intron | 35.0% | |
| AATAACAAACAAATGCCGTG+TGG | + | chr4_2:40169960-40169979 | None:intergenic | 35.0% | |
| TTCAAATTGTCGCATGATGT+AGG | - | chr4_2:40170017-40170036 | Msa0599900:intron | 35.0% | |
| !! | CTTTATGTTGCTTTAGGAAG+TGG | - | chr4_2:40170081-40170100 | Msa0599900:intron | 35.0% |
| CTGCTCTATCATGATATTCA+AGG | + | chr4_2:40170182-40170201 | None:intergenic | 35.0% | |
| GAATATCATGATAGAGCAGT+TGG | - | chr4_2:40170183-40170202 | Msa0599900:intron | 35.0% | |
| TTGATGAACAGAGATGAGAT+AGG | + | chr4_2:40170231-40170250 | None:intergenic | 35.0% | |
| !! | CTATCTTTTGCTGTGCTATA+GGG | + | chr4_2:40170313-40170332 | None:intergenic | 35.0% |
| !! | TCTATCTTTTGCTGTGCTAT+AGG | + | chr4_2:40170314-40170333 | None:intergenic | 35.0% |
| ACAGCAAAAGATAGAGAAGT+GGG | - | chr4_2:40170319-40170338 | Msa0599900:intron | 35.0% | |
| !! | CTAGTTTGACTTTTAGTGGA+CGG | - | chr4_2:40170451-40170470 | Msa0599900:intron | 35.0% |
| !! | AAGGCATTTTCCTACTAAGA+GGG | + | chr4_2:40170523-40170542 | None:intergenic | 35.0% |
| !!! | AAAGGCATTTTCCTACTAAG+AGG | + | chr4_2:40170524-40170543 | None:intergenic | 35.0% |
| ! | TGTCTTTAGATGTCATTTGC+TGG | - | chr4_2:40170609-40170628 | Msa0599900:intron | 35.0% |
| ! | GTCTTTAGATGTCATTTGCT+GGG | - | chr4_2:40170610-40170629 | Msa0599900:intron | 35.0% |
| TGACTCTTCACTGTTGAAAA+AGG | - | chr4_2:40170662-40170681 | Msa0599900:intron | 35.0% | |
| ACTCAATTTCAGATATGCAC+CGG | - | chr4_2:40170772-40170791 | Msa0599900:CDS | 35.0% | |
| ! | ATACACCTGGATTAGAACAT+TGG | - | chr4_2:40170852-40170871 | Msa0599900:CDS | 35.0% |
| !! | GAAAAGCATTAGAAAAGGAG+TGG | - | chr4_2:40170894-40170913 | Msa0599900:CDS | 35.0% |
| ! | TGGTCAAGAAGGTGATTTTA+TGG | - | chr4_2:40171227-40171246 | Msa0599900:intron | 35.0% |
| AAAGTTAGGCTAATCACAGA+AGG | + | chr4_2:40171340-40171359 | None:intergenic | 35.0% | |
| TTGTTTATTGTCATGTCAGG+TGG | - | chr4_2:40171398-40171417 | Msa0599900:intron | 35.0% | |
| CTATCCTGATGTTTACATGT+TGG | - | chr4_2:40171422-40171441 | Msa0599900:intron | 35.0% | |
| TCATCCAACATGTAAACATC+AGG | + | chr4_2:40171429-40171448 | None:intergenic | 35.0% | |
| ! | AATTCCATTGTTATTGCTGG+AGG | - | chr4_2:40171525-40171544 | Msa0599900:intron | 35.0% |
| CTACACTTGAATGACAGTAT+GGG | - | chr4_2:40171999-40172018 | Msa0599900:intron | 35.0% | |
| AGACACTAAAAAGGACTCAA+GGG | + | chr4_2:40172172-40172191 | None:intergenic | 35.0% | |
| TAGACACTAAAAAGGACTCA+AGG | + | chr4_2:40172173-40172192 | None:intergenic | 35.0% | |
| ! | GGAGCATCATACTTTGTTAT+TGG | - | chr4_2:40172411-40172430 | Msa0599900:CDS | 35.0% |
| !! | ACTCTAGTTGGATTTTGGAA+TGG | - | chr4_2:40172516-40172535 | Msa0599900:CDS | 35.0% |
| !!! | TTTTTTGGTGATGGATCATC+AGG | + | chr4_2:40172579-40172598 | None:intergenic | 35.0% |
| TGATGATCCATCACCAAAAA+AGG | - | chr4_2:40172578-40172597 | Msa0599900:CDS | 35.0% | |
| !!! | ATATCTCCAACGACCTTTTT+TGG | + | chr4_2:40172594-40172613 | None:intergenic | 35.0% |
| ! | GAAGTTTTCTGCTACAAGTC+TGG | + | chr4_2:40167613-40167632 | None:intergenic | 40.0% |
| TTAACTACCGAGGAATTCCT+CGG | - | chr4_2:40167638-40167657 | Msa0599900:three_prime_UTR | 40.0% | |
| !! | CAGCCGGATTTTTAATTCCT+CGG | - | chr4_2:40167671-40167690 | Msa0599900:three_prime_UTR | 40.0% |
| CTGCCGAGGAATTAAAAATC+CGG | + | chr4_2:40167677-40167696 | None:intergenic | 40.0% | |
| ! | AAAATACGTTTTTGCCCCCT+CGG | + | chr4_2:40167707-40167726 | None:intergenic | 40.0% |
| TTCACACATTAGAGAAGGCT+GGG | + | chr4_2:40167740-40167759 | None:intergenic | 40.0% | |
| TGCTGTTCACACATTAGAGA+AGG | + | chr4_2:40167745-40167764 | None:intergenic | 40.0% | |
| CAGAGAAGTAACAACGAAGA+TGG | - | chr4_2:40167801-40167820 | Msa0599900:three_prime_UTR | 40.0% | |
| AAAACTCGGTTCAGCCAAAT+TGG | - | chr4_2:40167953-40167972 | Msa0599900:exon | 40.0% | |
| AAATTGGTTGTGATCTGCGT+CGG | - | chr4_2:40167969-40167988 | Msa0599900:CDS | 40.0% | |
| !!! | CACTCATTGCCGATTTTCTA+TGG | - | chr4_2:40168006-40168025 | Msa0599900:CDS | 40.0% |
| GAAATTGGAACGAGGGAAAT+AGG | + | chr4_2:40168051-40168070 | None:intergenic | 40.0% | |
| CCAATTGAGCTAAACTCACT+AGG | + | chr4_2:40168547-40168566 | None:intergenic | 40.0% | |
| ! | CCTAGTGAGTTTAGCTCAAT+TGG | - | chr4_2:40168544-40168563 | Msa0599900:intron | 40.0% |
| ! | AGTGAGTTTAGCTCAATTGG+TGG | - | chr4_2:40168547-40168566 | Msa0599900:intron | 40.0% |
| TGCATAATATATGCAGGGGT+CGG | - | chr4_2:40168576-40168595 | Msa0599900:intron | 40.0% | |
| ! | GAGCTCCCACATTTTAAATG+TGG | + | chr4_2:40168630-40168649 | None:intergenic | 40.0% |
| TACTCTCTTAAACACTCGAC+AGG | + | chr4_2:40169039-40169058 | None:intergenic | 40.0% | |
| GAACAAGTGTTTGTAAGTGG+GGG | + | chr4_2:40169209-40169228 | None:intergenic | 40.0% | |
| CCTGAACAAGTGTTTGTAAG+TGG | + | chr4_2:40169212-40169231 | None:intergenic | 40.0% | |
| CCACTTACAAACACTTGTTC+AGG | - | chr4_2:40169209-40169228 | Msa0599900:intron | 40.0% | |
| AGGCTATCTCTCAACAAATG+TGG | - | chr4_2:40169229-40169248 | Msa0599900:intron | 40.0% | |
| GGCTATCTCTCAACAAATGT+GGG | - | chr4_2:40169230-40169249 | Msa0599900:intron | 40.0% | |
| CTTACAAGCGTAGTTAGGAA+TGG | - | chr4_2:40169262-40169281 | Msa0599900:intron | 40.0% | |
| GAGGAAACAATAACAAGCTC+TGG | - | chr4_2:40169492-40169511 | Msa0599900:intron | 40.0% | |
| GGCACATTCACATTTAGGAA+TGG | - | chr4_2:40169761-40169780 | Msa0599900:CDS | 40.0% | |
| !! | AGTACAAAGGTATCAGAGGT+GGG | + | chr4_2:40169846-40169865 | None:intergenic | 40.0% |
| !! | AAGTACAAAGGTATCAGAGG+TGG | + | chr4_2:40169847-40169866 | None:intergenic | 40.0% |
| !! | GTCAAGTACAAAGGTATCAG+AGG | + | chr4_2:40169850-40169869 | None:intergenic | 40.0% |
| !! | TGTTTCGGTGTCAAGTACAA+AGG | + | chr4_2:40169859-40169878 | None:intergenic | 40.0% |
| TTGACACCGAAACAAAGCAA+TGG | - | chr4_2:40169865-40169884 | Msa0599900:intron | 40.0% | |
| CACAGCAAAAGATAGAGAAG+TGG | - | chr4_2:40170318-40170337 | Msa0599900:intron | 40.0% | |
| ! | AGGCATTTTCCTACTAAGAG+GGG | + | chr4_2:40170522-40170541 | None:intergenic | 40.0% |
| ! | TGTCATTTGCTGGGACATTA+TGG | - | chr4_2:40170619-40170638 | Msa0599900:intron | 40.0% |
| !!! | TTCTTGTATCTGGTTTTGGG+TGG | - | chr4_2:40170728-40170747 | Msa0599900:CDS | 40.0% |
| AGAGGTCGATTGCATGTAAT+GGG | - | chr4_2:40170809-40170828 | Msa0599900:CDS | 40.0% | |
| AAAGAGAATCGACATACACC+TGG | - | chr4_2:40170839-40170858 | Msa0599900:CDS | 40.0% | |
| AGACTCCAATGTTCTAATCC+AGG | + | chr4_2:40170860-40170879 | None:intergenic | 40.0% | |
| TATTAAGCAACGAACCTGTG+AGG | + | chr4_2:40170950-40170969 | None:intergenic | 40.0% | |
| !!! | ATATTTTAGGGCCTGTGTTG+TGG | - | chr4_2:40171179-40171198 | Msa0599900:intron | 40.0% |
| GATCGTCTTTATGTTCTTGG+TGG | - | chr4_2:40171207-40171226 | Msa0599900:intron | 40.0% | |
| ! | TATGTTCTTGGTGGTCAAGA+AGG | - | chr4_2:40171216-40171235 | Msa0599900:intron | 40.0% |
| ! | GTGATTTTATGGCCAAACCT+GGG | - | chr4_2:40171238-40171257 | Msa0599900:intron | 40.0% |
| AAAAATAGGTGACCCAGGTT+TGG | + | chr4_2:40171253-40171272 | None:intergenic | 40.0% | |
| CACTTAAAAATAGGTGACCC+AGG | + | chr4_2:40171258-40171277 | None:intergenic | 40.0% | |
| CTGCGTGAGCACTTAAAAAT+AGG | + | chr4_2:40171267-40171286 | None:intergenic | 40.0% | |
| !!! | CTATTTTTAAGTGCTCACGC+AGG | - | chr4_2:40171265-40171284 | Msa0599900:intron | 40.0% |
| !! | TGTGAGTTAGGTTTTGGCAT+TGG | + | chr4_2:40171477-40171496 | None:intergenic | 40.0% |
| ATTGACACAGACACGAACAT+CGG | + | chr4_2:40171850-40171869 | None:intergenic | 40.0% | |
| TGTCTGTGTCAATGCTTCAT+AGG | - | chr4_2:40171857-40171876 | Msa0599900:intron | 40.0% | |
| ATAGGTTGTTCATCCAGTGT+TGG | - | chr4_2:40171875-40171894 | Msa0599900:intron | 40.0% | |
| TGTCATTCAAGTGTAGGACT+GGG | + | chr4_2:40171995-40172014 | None:intergenic | 40.0% | |
| CCATACTGTCATTCAAGTGT+AGG | + | chr4_2:40172001-40172020 | None:intergenic | 40.0% | |
| CCTACACTTGAATGACAGTA+TGG | - | chr4_2:40171998-40172017 | Msa0599900:intron | 40.0% | |
| GAGTCTATGACAGAGTGAAA+AGG | + | chr4_2:40172080-40172099 | None:intergenic | 40.0% | |
| AACAGACTTGACATATGTGC+AGG | + | chr4_2:40172351-40172370 | None:intergenic | 40.0% | |
| ATGATGCTCCTACTTGCAAT+TGG | + | chr4_2:40172401-40172420 | None:intergenic | 40.0% | |
| TGATCGGAAAGTTACCATAC+CGG | - | chr4_2:40172484-40172503 | Msa0599900:CDS | 40.0% | |
| !! | CAACTAGAGTTGTTTTCACC+CGG | + | chr4_2:40172506-40172525 | None:intergenic | 40.0% |
| !!! | TAGTTGGATTTTGGAATGGC+TGG | - | chr4_2:40172520-40172539 | Msa0599900:CDS | 40.0% |
| AAAAGGTCGTTGGAGATATG+TGG | - | chr4_2:40172595-40172614 | Msa0599900:CDS | 40.0% | |
| ACTATCCGAAATTGCAGCAA+AGG | - | chr4_2:40172688-40172707 | Msa0599900:intron | 40.0% | |
| CTTCACCTTTGCTGCAATTT+CGG | + | chr4_2:40172696-40172715 | None:intergenic | 40.0% | |
| AAATTGCAGCAAAGGTGAAG+AGG | - | chr4_2:40172696-40172715 | Msa0599900:intron | 40.0% | |
| GTGTAAGCACACCTCAAAAA+AGG | + | chr4_2:40172848-40172867 | None:intergenic | 40.0% | |
| TGACATCCACACAAACAGTT+AGG | - | chr4_2:40172891-40172910 | Msa0599900:intron | 40.0% | |
| GACATCCACACAAACAGTTA+GGG | - | chr4_2:40172892-40172911 | Msa0599900:intron | 40.0% | |
| TTAACTGCCGAGGAATTCCT+CGG | + | chr4_2:40167648-40167667 | None:intergenic | 45.0% | |
| GTTCACACATTAGAGAAGGC+TGG | + | chr4_2:40167741-40167760 | None:intergenic | 45.0% | |
| TCTTCAGATTCTAACGACGG+TGG | - | chr4_2:40167905-40167924 | Msa0599900:three_prime_UTR | 45.0% | |
| GACGCAGATCACAACCAATT+TGG | + | chr4_2:40167970-40167989 | None:intergenic | 45.0% | |
| GAACGAGGGAAATAGGAAGA+TGG | + | chr4_2:40168044-40168063 | None:intergenic | 45.0% | |
| ! | TACCTGCTCCTCAACTTGTT+TGG | - | chr4_2:40168156-40168175 | Msa0599900:intron | 45.0% |
| ! | ACCTGCTCCTCAACTTGTTT+GGG | - | chr4_2:40168157-40168176 | Msa0599900:intron | 45.0% |
| TCACCTGTTCCTAGACTTGA+TGG | - | chr4_2:40168194-40168213 | Msa0599900:intron | 45.0% | |
| ATAGCAGCACCATCAAGTCT+AGG | + | chr4_2:40168206-40168225 | None:intergenic | 45.0% | |
| CATTTGATATGTTGGGACGC+AGG | + | chr4_2:40168389-40168408 | None:intergenic | 45.0% | |
| GCATAATATATGCAGGGGTC+GGG | - | chr4_2:40168577-40168596 | Msa0599900:intron | 45.0% | |
| ! | TCCACTCACCAACGTTTTGA+AGG | - | chr4_2:40168762-40168781 | Msa0599900:intron | 45.0% |
| ! | TCCTTCAAAACGTTGGTGAG+TGG | + | chr4_2:40168766-40168785 | None:intergenic | 45.0% |
| !! | ACCTCACAAGTCGGTTTTGT+GGG | + | chr4_2:40169178-40169197 | None:intergenic | 45.0% |
| !! | TTTGATGATGGAACTTGGGG+AGG | - | chr4_2:40169714-40169733 | Msa0599900:CDS | 45.0% |
| CATTTAGGAATGGCGACAGA+TGG | - | chr4_2:40169771-40169790 | Msa0599900:CDS | 45.0% | |
| ACCGAAACAAAGCAATGGAG+CGG | - | chr4_2:40169870-40169889 | Msa0599900:intron | 45.0% | |
| !! | ACCGCTCCATTGCTTTGTTT+CGG | + | chr4_2:40169874-40169893 | None:intergenic | 45.0% |
| GGGAGATCAAGATTCAGCAT+TGG | + | chr4_2:40170161-40170180 | None:intergenic | 45.0% | |
| !! | ACTTTTAGTGGACGGAGACA+TGG | - | chr4_2:40170459-40170478 | Msa0599900:intron | 45.0% |
| ACTAAGAGGGGCAGACTAAA+TGG | + | chr4_2:40170510-40170529 | None:intergenic | 45.0% | |
| TTTAGTCTGCCCCTCTTAGT+AGG | - | chr4_2:40170510-40170529 | Msa0599900:intron | 45.0% | |
| GAGAGGTCGATTGCATGTAA+TGG | - | chr4_2:40170808-40170827 | Msa0599900:CDS | 45.0% | |
| ! | TGGAGTCTTGCTGTCAAGAA+TGG | - | chr4_2:40170872-40170891 | Msa0599900:CDS | 45.0% |
| ! | GGTGATTTTATGGCCAAACC+TGG | - | chr4_2:40171237-40171256 | Msa0599900:intron | 45.0% |
| !! | TTTTAAGTGCTCACGCAGGA+TGG | - | chr4_2:40171269-40171288 | Msa0599900:intron | 45.0% |
| CAGCATCGCAGAAGAAAGTT+AGG | + | chr4_2:40171354-40171373 | None:intergenic | 45.0% | |
| TGTTGGATGACGAGATGAAG+TGG | - | chr4_2:40171439-40171458 | Msa0599900:intron | 45.0% | |
| !! | GAGTTAGGTTTTGGCATTGG+AGG | + | chr4_2:40171474-40171493 | None:intergenic | 45.0% |
| TGTGCCTCCAGCAATAACAA+TGG | + | chr4_2:40171532-40171551 | None:intergenic | 45.0% | |
| GCACCCTGAAACCAAGAAAA+TGG | - | chr4_2:40171560-40171579 | Msa0599900:intron | 45.0% | |
| TTGACACAGACACGAACATC+GGG | + | chr4_2:40171849-40171868 | None:intergenic | 45.0% | |
| CTGTCATTCAAGTGTAGGAC+TGG | + | chr4_2:40171996-40172015 | None:intergenic | 45.0% | |
| TCAAGTCTGTTGTCTGCTGA+AGG | - | chr4_2:40172360-40172379 | Msa0599900:CDS | 45.0% | |
| TTGCAGAAGTGGTCTGTGAT+CGG | - | chr4_2:40172468-40172487 | Msa0599900:CDS | 45.0% | |
| GATCGGAAAGTTACCATACC+GGG | - | chr4_2:40172485-40172504 | Msa0599900:CDS | 45.0% | |
| !! | AGAGTTGTTTTCACCCGGTA+TGG | + | chr4_2:40172501-40172520 | None:intergenic | 45.0% |
| CGGGTGAAAACAACTCTAGT+TGG | - | chr4_2:40172504-40172523 | Msa0599900:CDS | 45.0% | |
| ACTTCAGGACAGAGAGACAA+GGG | - | chr4_2:40172552-40172571 | Msa0599900:CDS | 45.0% | |
| !!! | CCAACGACCTTTTTTGGTGA+TGG | + | chr4_2:40172588-40172607 | None:intergenic | 45.0% |
| CCATCACCAAAAAAGGTCGT+TGG | - | chr4_2:40172585-40172604 | Msa0599900:CDS | 45.0% | |
| ATCCACACAAACAGTTAGGG+TGG | - | chr4_2:40172895-40172914 | Msa0599900:intron | 45.0% | |
| !! | TTAAAATAAATAAAAACAAA+GGG | + | chr4_2:40171971-40171990 | None:intergenic | 5.0% |
| !!! | TTTAAAATAAATAAAAACAA+AGG | + | chr4_2:40171972-40171991 | None:intergenic | 5.0% |
| ACTTCGGCAGTTAACTACCG+AGG | - | chr4_2:40167628-40167647 | Msa0599900:three_prime_UTR | 50.0% | |
| AACGACGGTGGTGAATGACA+TGG | - | chr4_2:40167917-40167936 | Msa0599900:three_prime_UTR | 50.0% | |
| GAATGACATGGTTCGTCCGT+CGG | - | chr4_2:40167929-40167948 | Msa0599900:three_prime_UTR | 50.0% | |
| GTTCGTCCGTCGGTAAAACT+CGG | - | chr4_2:40167939-40167958 | Msa0599900:three_prime_UTR | 50.0% | |
| ! | GCTGAACCGAGTTTTACCGA+CGG | + | chr4_2:40167948-40167967 | None:intergenic | 50.0% |
| ! | TCCCAAACAAGTTGAGGAGC+AGG | + | chr4_2:40168161-40168180 | None:intergenic | 50.0% |
| GCACCATCAAGTCTAGGAAC+AGG | + | chr4_2:40168200-40168219 | None:intergenic | 50.0% | |
| ! | TGTGGAAAAGTGGGGTGTCT+GGG | + | chr4_2:40168612-40168631 | None:intergenic | 50.0% |
| ! | ATGTGGAAAAGTGGGGTGTC+TGG | + | chr4_2:40168613-40168632 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr4_2:40169167-40169186 | None:intergenic | 50.0% |
| !! | CCTCACAAGTCGGTTTTGTG+GGG | + | chr4_2:40169177-40169196 | None:intergenic | 50.0% |
| !! | CACCTCACAAGTCGGTTTTG+TGG | + | chr4_2:40169179-40169198 | None:intergenic | 50.0% |
| !! | CAAAACCGACTTGTGAGGTG+AGG | - | chr4_2:40169179-40169198 | Msa0599900:intron | 50.0% |
| GTAGTCCTCACCTCACAAGT+CGG | + | chr4_2:40169187-40169206 | None:intergenic | 50.0% | |
| CAGTATGGCCCACAATGTAG+AGG | - | chr4_2:40169819-40169838 | Msa0599900:intron | 50.0% | |
| AGGTGGGACCTCTACATTGT+GGG | + | chr4_2:40169830-40169849 | None:intergenic | 50.0% | |
| ! | ACATACCTAGGGACTGGCAA+AGG | + | chr4_2:40169903-40169922 | None:intergenic | 50.0% |
| TAGAGCAGTTGGATGTGCAG+AGG | - | chr4_2:40170194-40170213 | Msa0599900:intron | 50.0% | |
| !! | GATGTGCAGAGGTGTCTGAA+AGG | - | chr4_2:40170205-40170224 | Msa0599900:intron | 50.0% |
| ! | ATGCACCGGCAACTCAACTT+TGG | - | chr4_2:40170786-40170805 | Msa0599900:CDS | 50.0% |
| ! | CCTCTCCAAAGTTGAGTTGC+CGG | + | chr4_2:40170794-40170813 | None:intergenic | 50.0% |
| ! | GGTCGATTGCATGTAATGGG+TGG | - | chr4_2:40170812-40170831 | Msa0599900:CDS | 50.0% |
| ACGATCATTGGCCACAACAC+AGG | + | chr4_2:40171193-40171212 | None:intergenic | 50.0% | |
| CCTGGGAAAATCACCAACAC+TGG | + | chr4_2:40171891-40171910 | None:intergenic | 50.0% | |
| !!! | CCAGTGTTGGTGATTTTCCC+AGG | - | chr4_2:40171888-40171907 | Msa0599900:intron | 50.0% |
| ! | GGCTGGTTGTACTTCACTTC+AGG | - | chr4_2:40172537-40172556 | Msa0599900:CDS | 50.0% |
| CACTTCAGGACAGAGAGACA+AGG | - | chr4_2:40172551-40172570 | Msa0599900:CDS | 50.0% | |
| CACCACCCTAACTGTTTGTG+TGG | + | chr4_2:40172900-40172919 | None:intergenic | 50.0% | |
| GTGATCTGCGTCGGACTTCT+AGG | - | chr4_2:40167978-40167997 | Msa0599900:CDS | 55.0% | |
| GATCAGAAGTGGGGGTTTGC+AGG | - | chr4_2:40168357-40168376 | Msa0599900:intron | 55.0% | |
| ! | TGGAAAAGTGGGGTGTCTGG+GGG | + | chr4_2:40168610-40168629 | None:intergenic | 55.0% |
| ! | GTGGAAAAGTGGGGTGTCTG+GGG | + | chr4_2:40168611-40168630 | None:intergenic | 55.0% |
| ! | ATGTGGGAGCTCTAGCCACT+AGG | - | chr4_2:40168638-40168657 | Msa0599900:intron | 55.0% |
| !! | CCCCACAAAACCGACTTGTG+AGG | - | chr4_2:40169174-40169193 | Msa0599900:intron | 55.0% |
| GAGGTGGGACCTCTACATTG+TGG | + | chr4_2:40169831-40169850 | None:intergenic | 55.0% | |
| ! | ACCTAGGGACTGGCAAAGGA+GGG | + | chr4_2:40169899-40169918 | None:intergenic | 55.0% |
| ! | TACCTAGGGACTGGCAAAGG+AGG | + | chr4_2:40169900-40169919 | None:intergenic | 55.0% |
| ! | CCGGCAACTCAACTTTGGAG+AGG | - | chr4_2:40170791-40170810 | Msa0599900:CDS | 55.0% |
| AGTGAGATACCCATTCCCCG+TGG | - | chr4_2:40170920-40170939 | Msa0599900:intron | 55.0% | |
| TAAGTGCTCACGCAGGATGG+AGG | - | chr4_2:40171272-40171291 | Msa0599900:intron | 55.0% | |
| CCTCGGCAGTTAACTGCAGC+CGG | - | chr4_2:40167655-40167674 | Msa0599900:three_prime_UTR | 60.0% | |
| TCCTCGGCAGTTAACTGCCG+AGG | - | chr4_2:40167687-40167706 | Msa0599900:three_prime_UTR | 60.0% | |
| CCTCGGCAGTTAACTGCCGA+GGG | - | chr4_2:40167688-40167707 | Msa0599900:three_prime_UTR | 60.0% | |
| CTCGGCAGTTAACTGCCGAG+GGG | - | chr4_2:40167689-40167708 | Msa0599900:three_prime_UTR | 60.0% | |
| TCGGCAGTTAACTGCCGAGG+GGG | - | chr4_2:40167690-40167709 | Msa0599900:three_prime_UTR | 60.0% | |
| TCCCTCCTTTGCCAGTCCCT+AGG | - | chr4_2:40169895-40169914 | Msa0599900:intron | 60.0% | |
| GAGATACCCATTCCCCGTGG+AGG | - | chr4_2:40170923-40170942 | Msa0599900:intron | 60.0% | |
| TGAGGTCCTCCACGGGGAAT+GGG | + | chr4_2:40170932-40170951 | None:intergenic | 60.0% | |
| AACCTGTGAGGTCCTCCACG+GGG | + | chr4_2:40170938-40170957 | None:intergenic | 60.0% | |
| GAACCTGTGAGGTCCTCCAC+GGG | + | chr4_2:40170939-40170958 | None:intergenic | 60.0% | |
| CGAACCTGTGAGGTCCTCCA+CGG | + | chr4_2:40170940-40170959 | None:intergenic | 60.0% | |
| CCGGCTGCAGTTAACTGCCG+AGG | + | chr4_2:40167658-40167677 | None:intergenic | 65.0% | |
| CCCTCGGCAGTTAACTGCCG+AGG | + | chr4_2:40167691-40167710 | None:intergenic | 65.0% | |
| GTGAGGTCCTCCACGGGGAA+TGG | + | chr4_2:40170933-40170952 | None:intergenic | 65.0% | |
| TTCCCCGTGGAGGACCTCAC+AGG | - | chr4_2:40170933-40170952 | Msa0599900:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 40167582 | 40173027 | 40167582 | ID=Msa0599900;Name=Msa0599900 |
| chr4_2 | mRNA | 40167582 | 40173027 | 40167582 | ID=Msa0599900-mRNA-1;Parent=Msa0599900;Name=Msa0599900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.83|0.71|0.85|1|1|7|383|428 |
| chr4_2 | exon | 40167582 | 40168135 | 40167582 | ID=Msa0599900-mRNA-1:exon:8773;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40168986 | 40169192 | 40168986 | ID=Msa0599900-mRNA-1:exon:8772;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40169316 | 40169421 | 40169316 | ID=Msa0599900-mRNA-1:exon:8771;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40169655 | 40169825 | 40169655 | ID=Msa0599900-mRNA-1:exon:8770;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40170693 | 40170922 | 40170693 | ID=Msa0599900-mRNA-1:exon:8769;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40172332 | 40172697 | 40172332 | ID=Msa0599900-mRNA-1:exon:8768;Parent=Msa0599900-mRNA-1 |
| chr4_2 | exon | 40172992 | 40173027 | 40172992 | ID=Msa0599900-mRNA-1:exon:8767;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40172992 | 40173027 | 40172992 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40172332 | 40172697 | 40172332 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40170693 | 40170922 | 40170693 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40169655 | 40169825 | 40169655 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40169316 | 40169421 | 40169316 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40168986 | 40169192 | 40168986 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | CDS | 40167965 | 40168135 | 40167965 | ID=Msa0599900-mRNA-1:cds;Parent=Msa0599900-mRNA-1 |
| chr4_2 | three_prime_UTR | 40167582 | 40167964 | 40167582 | ID=Msa0599900-mRNA-1:three_prime_utr;Parent=Msa0599900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
