AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62427


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62427.t1 MTR_4g114320 95.226 398 19 0 1 398 1 398 0.0 782
MS.gene62427.t1 MTR_3g107510 66.842 380 107 7 26 399 32 398 1.43e-172 488
MS.gene62427.t1 MTR_1g012030 77.305 282 62 2 115 395 131 411 4.15e-155 444
MS.gene62427.t1 MTR_4g005330 38.908 293 161 3 120 395 63 354 2.81e-68 220
MS.gene62427.t1 MTR_4g005330 39.100 289 158 3 124 395 1 288 8.65e-68 217
MS.gene62427.t1 MTR_8g096050 37.993 279 167 4 121 394 225 502 1.00e-52 183
MS.gene62427.t1 MTR_3g098460 36.559 279 171 4 121 394 203 480 1.81e-50 177
MS.gene62427.t1 MTR_7g068340 33.942 274 163 7 134 399 98 361 2.16e-47 166
MS.gene62427.t1 MTR_7g068340 28.161 174 120 2 122 295 186 354 2.87e-17 83.2
MS.gene62427.t1 MTR_7g084400 35.816 282 170 5 119 394 209 485 5.30e-47 167
MS.gene62427.t1 MTR_5g009500 32.343 303 176 6 121 394 36 338 1.27e-46 163
MS.gene62427.t1 MTR_5g009500 28.704 216 138 5 199 398 13 228 6.42e-17 81.6
MS.gene62427.t1 MTR_5g009500 26.000 200 121 7 120 294 138 335 2.98e-13 70.9
MS.gene62427.t1 MTR_7g064980 33.770 305 178 8 110 394 14 314 3.19e-46 161
MS.gene62427.t1 MTR_7g064980 25.510 196 134 4 108 294 119 311 1.55e-14 74.3
MS.gene62427.t1 MTR_8g027975 32.680 306 173 8 121 394 49 353 6.18e-46 162
MS.gene62427.t1 MTR_8g027975 30.102 196 125 4 214 398 47 241 1.68e-18 86.7
MS.gene62427.t1 MTR_3g104600 31.498 327 185 9 99 394 11 329 9.54e-42 150
MS.gene62427.t1 MTR_3g104600 27.500 200 126 2 219 399 36 235 6.19e-17 81.6
MS.gene62427.t1 MTR_8g090210 34.354 294 169 5 121 394 108 397 1.58e-41 151
MS.gene62427.t1 MTR_8g090210 32.044 181 101 5 139 298 219 398 1.07e-15 78.6
MS.gene62427.t1 MTR_2g436930 32.362 309 169 8 125 394 17 324 1.13e-40 147
MS.gene62427.t1 MTR_2g436930 29.592 196 118 4 217 393 14 208 4.96e-18 84.7
MS.gene62427.t1 MTR_2g436930 26.943 193 113 5 124 291 129 318 4.20e-14 73.2
MS.gene62427.t1 MTR_3g074490 34.564 298 171 5 117 394 110 403 2.36e-40 148
MS.gene62427.t1 MTR_3g074490 27.778 180 127 2 220 399 118 294 1.13e-13 72.4
MS.gene62427.t1 MTR_3g074490 29.508 244 146 7 77 298 165 404 8.08e-11 63.5
MS.gene62427.t1 MTR_4g119770 29.904 311 176 6 125 394 16 325 4.12e-39 143
MS.gene62427.t1 MTR_4g119770 27.317 205 127 3 217 400 13 216 5.77e-18 84.7
MS.gene62427.t1 MTR_4g119770 28.205 195 112 5 124 293 130 321 4.03e-15 76.3
MS.gene62427.t1 MTR_4g016730 32.509 283 152 8 134 399 100 360 4.40e-39 144
MS.gene62427.t1 MTR_4g016730 27.692 195 121 5 122 311 195 374 4.07e-11 64.3
MS.gene62427.t1 MTR_5g081150 32.432 296 180 7 119 396 30 323 1.05e-35 134
MS.gene62427.t1 MTR_5g081150 28.111 217 135 6 198 400 19 228 6.03e-12 66.6
MS.gene62427.t1 MTR_6g091800 27.273 297 186 6 121 394 17 306 6.37e-35 131
MS.gene62427.t1 MTR_6g091800 29.353 201 127 4 212 397 12 212 9.57e-19 86.7
MS.gene62427.t1 MTR_7g109135 30.903 288 182 7 125 397 24 309 1.45e-31 122
MS.gene62427.t1 MTR_7g109135 28.042 189 126 4 220 399 24 211 6.39e-11 63.5
MS.gene62427.t1 MTR_6g091800 25.234 321 186 6 121 394 17 330 2.96e-31 122
MS.gene62427.t1 MTR_6g091800 26.222 225 127 4 212 397 12 236 2.59e-15 77.0
MS.gene62427.t1 MTR_6g091800 24.454 229 123 6 123 306 115 338 3.61e-11 64.3
MS.gene62427.t1 MTR_2g436930 36.181 199 105 4 217 394 37 234 4.58e-31 119
MS.gene62427.t1 MTR_2g436930 26.943 193 113 5 124 291 39 228 1.09e-14 73.6
MS.gene62427.t1 MTR_8g076760 30.142 282 165 10 139 394 30 305 5.12e-30 118
MS.gene62427.t1 MTR_8g076760 28.488 172 113 4 233 396 29 198 5.24e-14 72.8
MS.gene62427.t1 MTR_8g076760 27.500 200 119 9 123 300 113 308 3.48e-13 70.1
MS.gene62427.t1 MTR_7g084400 35.648 216 131 5 119 327 203 417 3.07e-29 118
MS.gene62427.t1 MTR_7g084400 29.213 178 122 2 219 393 208 384 9.99e-14 72.8
MS.gene62427.t1 MTR_6g034145 27.165 254 157 5 162 394 6 252 6.59e-29 114
MS.gene62427.t1 MTR_6g034145 30.263 152 94 2 258 397 7 158 4.28e-16 78.2
MS.gene62427.t1 MTR_6g034145 25.854 205 126 5 123 306 61 260 6.66e-13 68.6
MS.gene62427.t1 MTR_6g092210 26.613 248 160 5 162 394 6 246 6.51e-28 110
MS.gene62427.t1 MTR_6g092210 30.822 146 95 2 258 397 7 152 2.80e-16 78.6
MS.gene62427.t1 MTR_7g109135 29.825 285 182 7 125 397 24 302 1.22e-27 111
MS.gene62427.t1 MTR_6g091800 27.426 237 145 5 121 337 17 246 5.50e-27 108
MS.gene62427.t1 MTR_6g091800 29.353 201 127 4 212 397 12 212 5.87e-19 86.3
MS.gene62427.t1 MTR_6g091800 27.426 237 145 5 121 337 17 246 7.78e-27 108
MS.gene62427.t1 MTR_6g091800 29.353 201 127 4 212 397 12 212 6.07e-19 86.7
MS.gene62427.t1 MTR_1g097890 28.000 275 180 5 124 398 52 308 1.60e-26 108
MS.gene62427.t1 MTR_1g087840 30.534 262 162 7 142 395 55 304 5.03e-26 107
MS.gene62427.t1 MTR_6g091800 24.092 303 176 6 121 376 17 312 1.08e-25 106
MS.gene62427.t1 MTR_6g091800 26.222 225 127 4 212 397 12 236 1.90e-15 77.0
MS.gene62427.t1 MTR_8g098240 29.963 267 179 5 124 388 321 581 1.82e-25 108
MS.gene62427.t1 MTR_8g098240 25.668 187 123 4 119 297 409 587 3.39e-13 71.6
MS.gene62427.t1 MTR_8g098240 26.540 211 134 5 199 394 287 491 1.55e-12 69.7
MS.gene62427.t1 MTR_4g119770 28.689 244 142 5 125 337 16 258 5.01e-25 103
MS.gene62427.t1 MTR_4g119770 27.317 205 127 3 217 400 13 216 1.95e-18 84.7
MS.gene62427.t1 MTR_5g055410 32.759 290 164 9 135 400 33 315 1.00e-24 104
MS.gene62427.t1 MTR_7g109135 30.901 233 151 6 173 397 1 231 5.72e-24 99.8
MS.gene62427.t1 MTR_5g073040 27.178 287 195 7 123 400 39 320 2.03e-23 100
MS.gene62427.t1 MTR_6g091800 24.904 261 145 5 121 337 17 270 2.40e-23 99.4
MS.gene62427.t1 MTR_6g091800 26.222 225 127 4 212 397 12 236 1.48e-15 77.0
MS.gene62427.t1 MTR_6g091800 24.904 261 145 5 121 337 17 270 2.62e-23 99.4
MS.gene62427.t1 MTR_6g091800 26.222 225 127 4 212 397 12 236 1.76e-15 76.6
MS.gene62427.t1 MTR_8g066975 25.763 295 194 6 121 394 6 296 2.89e-22 96.3
MS.gene62427.t1 MTR_6g034515 28.253 269 177 7 139 398 83 344 7.74e-22 96.3
MS.gene62427.t1 MTR_6g034515 29.949 197 121 4 124 306 161 354 1.05e-15 78.2
MS.gene62427.t1 MTR_7g109135 32.227 211 133 6 195 397 2 210 9.03e-22 93.2
MS.gene62427.t1 MTR_8g092080 27.076 277 182 6 123 398 52 309 3.15e-21 94.0
MS.gene62427.t1 MTR_5g030530 26.102 295 193 6 121 394 6 296 4.07e-21 93.2
MS.gene62427.t1 MTR_3g104500 25.939 293 195 8 121 394 32 321 4.19e-20 90.9
MS.gene62427.t1 MTR_3g104500 29.500 200 118 5 219 399 35 230 1.34e-15 77.4
MS.gene62427.t1 MTR_6g015860 25.503 298 188 10 129 399 21 311 1.66e-19 89.0
MS.gene62427.t1 MTR_8g019480 24.848 330 205 9 111 399 22 349 1.79e-19 89.4
MS.gene62427.t1 MTR_4g012850 23.711 291 213 4 115 398 8 296 3.52e-19 87.8
MS.gene62427.t1 MTR_4g012850 27.273 198 132 4 118 306 104 298 1.63e-17 82.8
MS.gene62427.t1 MTR_3g028590 27.113 284 175 8 123 382 97 372 9.06e-19 87.8
MS.gene62427.t1 MTR_3g028590 27.113 284 175 8 123 382 93 368 1.03e-18 87.4
MS.gene62427.t1 MTR_8g036880 25.083 303 164 6 120 382 99 378 1.22e-18 87.4
MS.gene62427.t1 MTR_4g078545 25.540 278 187 6 123 382 75 350 1.26e-18 87.0
MS.gene62427.t1 MTR_6g091910 29.500 200 121 5 212 394 12 208 1.30e-18 84.3
MS.gene62427.t1 MTR_6g091910 27.805 205 124 5 121 306 17 216 3.48e-16 77.4
MS.gene62427.t1 MTR_7g015870 25.614 285 180 9 139 398 41 318 1.63e-18 85.9
MS.gene62427.t1 MTR_2g098070 25.498 251 165 6 159 395 111 353 4.06e-18 85.5
MS.gene62427.t1 MTR_1g095780 25.623 281 195 8 120 399 522 789 8.92e-18 85.9
MS.gene62427.t1 MTR_1g095780 27.551 196 133 4 118 309 605 795 1.25e-12 70.1
MS.gene62427.t1 MTR_3g025800 24.688 320 195 7 120 400 25 337 9.59e-18 84.3
MS.gene62427.t1 MTR_8g107270 23.022 278 193 6 123 382 19 293 9.46e-17 80.9
MS.gene62427.t1 MTR_1g088995 29.121 182 118 4 222 396 34 211 2.26e-16 78.6
MS.gene62427.t1 MTR_2g032610 27.491 291 184 10 121 388 27 313 2.56e-16 79.7
MS.gene62427.t1 MTR_2g102010 29.605 152 97 3 136 277 123 274 5.70e-16 78.2
MS.gene62427.t1 MTR_2g102010 22.807 285 210 4 121 397 15 297 3.66e-13 70.1
MS.gene62427.t1 MTR_5g081150 28.959 221 140 6 119 324 30 248 6.22e-16 77.4
MS.gene62427.t1 MTR_5g081150 28.111 217 135 6 198 400 19 228 2.02e-12 67.0
MS.gene62427.t1 MTR_5g081150 28.755 233 144 7 119 336 30 255 6.55e-16 77.4
MS.gene62427.t1 MTR_5g081150 28.111 217 135 6 198 400 19 228 2.64e-12 67.0
MS.gene62427.t1 MTR_7g015870 24.911 281 177 10 139 393 37 309 8.71e-16 78.2
MS.gene62427.t1 MTR_7g015870 24.731 186 126 4 124 295 123 308 2.57e-13 70.9
MS.gene62427.t1 MTR_1g088995 29.121 182 118 4 222 396 34 211 1.05e-15 77.8
MS.gene62427.t1 MTR_1g088995 25.000 276 196 5 125 393 35 306 1.12e-13 71.6
MS.gene62427.t1 MTR_4g088545 23.701 308 198 8 114 394 3 300 1.23e-14 74.3
MS.gene62427.t1 MTR_7g117030 26.393 341 178 14 120 400 14 341 1.12e-13 72.0
MS.gene62427.t1 MTR_6g091800 25.581 172 104 4 121 272 17 184 2.00e-13 68.9
MS.gene62427.t1 MTR_6g091800 28.249 177 112 4 212 373 12 188 8.72e-13 67.0
MS.gene62427.t1 MTR_3g100570 21.725 313 202 10 120 394 3 310 4.77e-13 69.7
MS.gene62427.t1 MTR_1g090330 23.469 196 131 5 116 295 103 295 6.69e-13 69.3
MS.gene62427.t1 MTR_1g090330 20.962 291 204 9 122 393 13 296 2.71e-11 64.3
MS.gene62427.t1 MTR_1g090330 23.204 181 119 4 232 398 28 202 4.67e-11 63.9
MS.gene62427.t1 MTR_4g057850 22.337 291 188 8 118 384 17 293 1.83e-12 68.2
MS.gene62427.t1 MTR_6g033280 23.474 213 152 4 110 315 50 258 2.23e-12 68.2
MS.gene62427.t1 MTR_6g033280 25.405 185 132 3 216 397 61 242 2.99e-11 64.7
MS.gene62427.t1 MTR_6g091800 26.923 130 86 3 121 245 17 142 2.57e-11 63.2
MS.gene62427.t1 MTR_7g083790 25.000 180 128 3 126 300 85 262 2.89e-11 65.1
MS.gene62427.t1 MTR_3g104810 22.772 303 190 7 139 399 48 348 3.43e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62427.t1 AT4G32400 70.890 292 83 2 109 399 100 390 2.06e-152 436
MS.gene62427.t1 AT3G20240 41.781 292 152 4 121 395 50 340 1.40e-70 226
MS.gene62427.t1 AT5G61810 36.429 280 158 6 123 394 65 332 7.37e-47 164
MS.gene62427.t1 AT5G61810 28.814 177 122 3 122 295 155 330 1.19e-18 86.7
MS.gene62427.t1 AT5G51050 37.410 278 163 6 123 394 223 495 1.00e-46 167
MS.gene62427.t1 AT5G51050 28.889 180 121 4 122 296 317 494 3.79e-18 86.7
MS.gene62427.t1 AT3G51870 32.000 275 169 6 134 400 102 366 9.77e-46 162
MS.gene62427.t1 AT3G51870 27.841 176 118 4 122 295 190 358 3.46e-14 73.9
MS.gene62427.t1 AT4G01100 33.660 306 170 9 121 394 40 344 1.48e-45 160
MS.gene62427.t1 AT4G01100 30.928 194 122 4 214 396 38 230 2.14e-17 83.2
MS.gene62427.t1 AT4G01100 25.000 200 125 3 120 294 142 341 1.08e-14 75.1
MS.gene62427.t1 AT5G61810 36.429 280 158 6 123 394 208 475 1.79e-45 163
MS.gene62427.t1 AT5G61810 28.814 177 122 3 122 295 298 473 3.72e-18 86.7
MS.gene62427.t1 AT3G53940 34.354 294 173 7 119 394 69 360 5.51e-45 159
MS.gene62427.t1 AT3G53940 31.000 200 114 6 219 400 74 267 9.81e-18 84.3
MS.gene62427.t1 AT2G37890 32.770 296 175 7 119 394 41 332 8.53e-45 158
MS.gene62427.t1 AT2G37890 28.571 217 135 6 198 400 29 239 6.35e-18 84.7
MS.gene62427.t1 AT4G01100 32.288 319 171 8 121 394 40 358 8.93e-45 159
MS.gene62427.t1 AT4G01100 29.469 207 122 4 214 396 38 244 8.28e-17 81.6
MS.gene62427.t1 AT4G01100 25.000 200 125 3 120 294 156 355 9.43e-15 75.5
MS.gene62427.t1 AT5G07320 37.175 269 149 7 132 392 218 474 7.20e-44 159
MS.gene62427.t1 AT5G07320 29.518 166 114 2 228 393 219 381 2.52e-14 74.7
MS.gene62427.t1 AT5G01500 33.091 275 166 6 134 400 130 394 8.32e-43 155
MS.gene62427.t1 AT5G01500 28.977 176 120 2 120 295 216 386 4.48e-14 73.9
MS.gene62427.t1 AT4G01100 32.653 294 167 8 132 394 1 294 3.44e-42 150
MS.gene62427.t1 AT4G01100 29.885 174 110 4 234 396 8 180 2.39e-15 76.6
MS.gene62427.t1 AT4G01100 24.638 207 131 3 120 301 92 298 8.04e-15 75.1
MS.gene62427.t1 AT5G64970 35.714 294 165 6 121 394 133 422 3.57e-41 150
MS.gene62427.t1 AT5G64970 30.387 181 104 5 139 298 244 423 4.38e-14 73.9
MS.gene62427.t1 AT5G64970 34.948 289 164 6 126 394 14 298 4.57e-40 145
MS.gene62427.t1 AT5G64970 30.387 181 104 5 139 298 120 299 1.69e-14 73.9
MS.gene62427.t1 AT5G64970 29.143 175 120 3 225 399 19 189 3.25e-11 64.3
MS.gene62427.t1 AT3G55640 32.667 300 182 7 119 400 34 331 6.23e-39 142
MS.gene62427.t1 AT3G55640 29.756 205 126 6 203 391 21 223 7.48e-18 84.3
MS.gene62427.t1 AT3G55640 27.411 197 133 5 110 298 132 326 5.63e-15 75.9
MS.gene62427.t1 AT3G55640 32.667 300 182 7 119 400 34 331 6.23e-39 142
MS.gene62427.t1 AT3G55640 29.756 205 126 6 203 391 21 223 7.48e-18 84.3
MS.gene62427.t1 AT3G55640 27.411 197 133 5 110 298 132 326 5.63e-15 75.9
MS.gene62427.t1 AT1G14560 31.271 291 162 8 134 394 38 320 1.34e-38 141
MS.gene62427.t1 AT1G14560 30.055 183 112 2 234 400 43 225 1.26e-19 89.4
MS.gene62427.t1 AT4G26180 29.795 292 180 6 121 391 19 306 1.45e-37 139
MS.gene62427.t1 AT4G26180 31.122 196 120 4 212 392 14 209 5.78e-18 84.7
MS.gene62427.t1 AT3G21390 30.556 324 163 7 125 397 21 333 1.96e-37 139
MS.gene62427.t1 AT3G21390 29.082 196 109 6 124 291 131 324 1.54e-12 68.6
MS.gene62427.t1 AT3G21390 30.556 324 163 7 125 397 43 355 4.84e-37 138
MS.gene62427.t1 AT3G21390 29.082 196 109 6 124 291 153 346 2.00e-12 68.6
MS.gene62427.t1 AT1G78180 31.544 298 179 6 121 398 126 418 1.21e-35 135
MS.gene62427.t1 AT5G64970 35.145 276 155 6 121 376 133 404 1.23e-35 135
MS.gene62427.t1 AT5G64970 30.233 172 117 2 220 391 137 305 6.93e-13 70.1
MS.gene62427.t1 AT5G48970 29.487 312 177 7 125 394 24 334 3.12e-35 132
MS.gene62427.t1 AT5G48970 29.442 197 117 5 220 396 24 218 5.52e-18 84.7
MS.gene62427.t1 AT5G48970 26.531 196 115 5 123 291 135 328 4.29e-14 73.2
MS.gene62427.t1 AT4G26180 29.242 277 171 6 121 376 19 291 3.96e-33 126
MS.gene62427.t1 AT4G26180 31.122 196 120 4 212 392 14 209 3.52e-18 84.7
MS.gene62427.t1 AT1G14560 30.769 273 151 8 134 376 38 302 6.96e-33 125
MS.gene62427.t1 AT1G14560 30.055 183 112 2 234 400 43 225 1.25e-19 89.0
MS.gene62427.t1 AT5G66380 31.757 296 175 10 125 397 12 303 3.21e-31 121
MS.gene62427.t1 AT5G66380 29.843 191 125 4 217 399 9 198 2.07e-18 85.5
MS.gene62427.t1 AT5G48970 30.502 259 153 6 162 394 6 263 2.95e-30 117
MS.gene62427.t1 AT5G48970 26.531 196 115 5 123 291 64 257 1.33e-14 73.9
MS.gene62427.t1 AT5G48970 29.054 148 99 3 253 396 2 147 8.02e-14 71.6
MS.gene62427.t1 AT1G14560 33.831 201 104 5 219 394 26 222 2.47e-28 111
MS.gene62427.t1 AT1G14560 23.188 207 128 4 115 294 17 219 1.01e-11 64.7
MS.gene62427.t1 AT1G14560 32.407 108 59 1 307 400 20 127 7.07e-11 62.4
MS.gene62427.t1 AT2G30160 27.972 286 190 6 123 396 42 323 1.74e-27 111
MS.gene62427.t1 AT1G34065 28.058 278 182 5 123 400 75 334 1.36e-26 109
MS.gene62427.t1 AT1G34065 28.221 163 111 3 119 279 152 310 8.99e-15 75.5
MS.gene62427.t1 AT1G34065 29.545 176 98 4 217 388 74 227 1.26e-12 68.9
MS.gene62427.t1 AT1G07030 28.975 283 188 6 123 396 40 318 1.41e-26 108
MS.gene62427.t1 AT1G34065 28.058 278 182 5 123 400 82 341 1.64e-26 109
MS.gene62427.t1 AT1G34065 28.221 163 111 3 119 279 159 317 1.09e-14 75.1
MS.gene62427.t1 AT1G34065 29.050 179 101 4 217 391 81 237 1.29e-12 68.9
MS.gene62427.t1 AT4G39460 28.417 278 181 5 123 400 58 317 2.23e-25 105
MS.gene62427.t1 AT4G39460 28.221 163 111 3 119 279 135 293 9.65e-13 68.9
MS.gene62427.t1 AT4G39460 28.417 278 181 5 123 400 58 317 2.23e-25 105
MS.gene62427.t1 AT4G39460 28.221 163 111 3 119 279 135 293 9.65e-13 68.9
MS.gene62427.t1 AT4G39460 28.417 278 181 5 123 400 58 317 2.23e-25 105
MS.gene62427.t1 AT4G39460 28.221 163 111 3 119 279 135 293 9.65e-13 68.9
MS.gene62427.t1 AT4G11440 29.102 323 209 8 86 394 287 603 2.90e-25 108
MS.gene62427.t1 AT4G11440 31.461 178 117 2 218 395 330 502 1.51e-16 82.0
MS.gene62427.t1 AT4G11440 29.102 323 209 8 86 394 287 603 2.90e-25 108
MS.gene62427.t1 AT4G11440 31.461 178 117 2 218 395 330 502 1.51e-16 82.0
MS.gene62427.t1 AT1G25380 32.384 281 162 10 135 394 33 306 4.67e-25 105
MS.gene62427.t1 AT1G25380 32.000 175 102 6 234 396 37 206 1.59e-11 65.9
MS.gene62427.t1 AT1G25380 32.384 281 162 10 135 394 33 306 4.67e-25 105
MS.gene62427.t1 AT1G25380 32.000 175 102 6 234 396 37 206 1.59e-11 65.9
MS.gene62427.t1 AT5G46800 27.333 300 190 7 119 394 4 299 7.31e-25 103
MS.gene62427.t1 AT5G46800 27.333 300 190 7 119 394 4 299 7.31e-25 103
MS.gene62427.t1 AT5G46800 27.333 300 190 7 119 394 4 299 7.31e-25 103
MS.gene62427.t1 AT3G53940 31.674 221 134 6 119 324 69 287 3.46e-24 101
MS.gene62427.t1 AT3G53940 31.000 200 114 6 219 400 74 267 4.70e-18 84.3
MS.gene62427.t1 AT2G47490 30.634 284 167 9 135 397 29 303 4.52e-24 101
MS.gene62427.t1 AT5G26200 25.155 322 203 11 110 399 27 342 7.09e-21 93.2
MS.gene62427.t1 AT2G35800 27.046 281 192 8 120 399 542 810 9.68e-21 95.1
MS.gene62427.t1 AT2G33820 25.667 300 188 10 121 394 16 306 1.49e-20 91.7
MS.gene62427.t1 AT3G55640 30.769 221 136 6 119 324 34 252 1.49e-20 90.9
MS.gene62427.t1 AT3G55640 29.756 205 126 6 203 391 21 223 1.94e-18 84.7
MS.gene62427.t1 AT3G55640 30.769 221 136 6 119 324 34 252 1.49e-20 90.9
MS.gene62427.t1 AT3G55640 29.756 205 126 6 203 391 21 223 1.94e-18 84.7
MS.gene62427.t1 AT1G79900 28.718 195 134 3 118 311 104 294 5.18e-20 90.1
MS.gene62427.t1 AT1G79900 25.000 260 183 7 139 394 32 283 7.19e-15 75.1
MS.gene62427.t1 AT5G56450 26.174 298 192 9 121 394 32 325 6.41e-20 90.5
MS.gene62427.t1 AT5G56450 27.778 198 124 3 219 397 35 232 8.10e-15 75.5
MS.gene62427.t1 AT2G26360 26.174 298 202 10 102 395 94 377 1.90e-18 86.7
MS.gene62427.t1 AT2G26360 29.121 182 122 4 124 303 206 382 3.09e-13 71.2
MS.gene62427.t1 AT1G72820 27.007 274 163 7 163 399 70 343 4.38e-18 85.1
MS.gene62427.t1 AT1G72820 27.273 209 117 5 126 299 132 340 7.99e-12 66.6
MS.gene62427.t1 AT1G72820 27.007 274 163 7 163 399 70 343 4.38e-18 85.1
MS.gene62427.t1 AT1G72820 27.273 209 117 5 126 299 132 340 7.99e-12 66.6
MS.gene62427.t1 AT2G33820 25.000 308 188 11 121 394 16 314 5.77e-18 84.3
MS.gene62427.t1 AT5G42130 26.394 269 183 7 139 398 134 396 2.24e-17 84.0
MS.gene62427.t1 AT5G13490 24.870 386 233 13 26 382 7 364 2.31e-17 83.6
MS.gene62427.t1 AT5G13490 23.944 213 137 5 207 398 77 285 9.96e-11 63.5
MS.gene62427.t1 AT5G13490 24.870 386 233 13 26 382 7 364 2.31e-17 83.6
MS.gene62427.t1 AT5G13490 23.944 213 137 5 207 398 77 285 9.96e-11 63.5
MS.gene62427.t1 AT5G15640 26.882 279 176 8 139 393 44 318 2.51e-17 82.8
MS.gene62427.t1 AT4G28390 24.658 292 190 7 114 382 74 358 2.64e-17 83.2
MS.gene62427.t1 AT4G28390 27.461 193 116 6 219 391 84 272 3.07e-11 65.1
MS.gene62427.t1 AT4G28390 24.658 292 190 7 114 382 74 358 2.64e-17 83.2
MS.gene62427.t1 AT4G28390 27.461 193 116 6 219 391 84 272 3.07e-11 65.1
MS.gene62427.t1 AT5G15640 26.786 280 175 8 139 393 37 311 3.84e-17 82.0
MS.gene62427.t1 AT5G15640 27.225 191 117 6 124 295 123 310 9.98e-11 62.8
MS.gene62427.t1 AT5G17400 25.600 250 165 5 143 382 51 289 6.15e-17 81.3
MS.gene62427.t1 AT3G08580 24.739 287 179 7 123 382 84 360 2.27e-16 80.5
MS.gene62427.t1 AT3G08580 24.739 287 179 7 123 382 84 360 2.27e-16 80.5
MS.gene62427.t1 AT4G03115 28.729 181 115 5 223 396 40 213 2.30e-16 78.2
MS.gene62427.t1 AT4G03115 28.729 181 115 5 223 396 40 213 3.08e-16 77.8
MS.gene62427.t1 AT4G27940 28.464 267 160 10 154 394 146 407 5.08e-16 79.7
MS.gene62427.t1 AT1G74240 25.329 304 186 7 120 388 33 330 1.30e-15 78.2
MS.gene62427.t1 AT1G74240 27.027 222 116 7 117 299 124 338 7.72e-11 63.5
MS.gene62427.t1 AT4G03115 28.571 182 116 5 223 397 40 214 2.29e-15 76.6
MS.gene62427.t1 AT4G03115 26.087 276 191 6 124 393 40 308 2.54e-14 73.6
MS.gene62427.t1 AT4G03115 30.573 157 100 3 120 271 131 283 1.60e-12 68.2
MS.gene62427.t1 AT1G14140 27.670 206 131 6 104 294 95 297 2.64e-15 76.6
MS.gene62427.t1 AT1G14140 21.769 294 207 10 118 393 11 299 3.31e-14 73.2
MS.gene62427.t1 AT1G14140 25.269 186 116 6 231 398 29 209 8.36e-11 63.2
MS.gene62427.t1 AT4G03115 28.729 181 115 5 223 396 72 245 4.83e-15 76.3
MS.gene62427.t1 AT4G03115 26.087 276 191 6 124 393 72 340 3.10e-14 73.9
MS.gene62427.t1 AT4G03115 30.573 157 100 3 120 271 163 315 1.76e-12 68.6
MS.gene62427.t1 AT2G33820 27.317 205 130 7 204 394 26 225 5.83e-15 74.3
MS.gene62427.t1 AT5G58970 24.351 308 204 9 110 397 3 301 7.35e-15 75.1
MS.gene62427.t1 AT5G01340 24.324 296 177 11 118 384 12 289 2.15e-13 70.9
MS.gene62427.t1 AT5G01340 28.079 203 126 8 209 399 8 202 2.32e-12 67.8
MS.gene62427.t1 AT5G09470 24.370 238 169 3 164 394 99 332 4.01e-13 70.5
MS.gene62427.t1 AT4G03115 30.573 157 100 3 120 271 60 212 4.36e-13 68.9
MS.gene62427.t1 AT4G03115 28.151 238 159 6 160 393 8 237 7.61e-13 68.2
MS.gene62427.t1 AT4G03115 28.169 142 95 3 256 397 9 143 7.78e-11 62.4
MS.gene62427.t1 AT4G03115 30.573 157 100 3 120 271 68 220 6.44e-13 68.6
MS.gene62427.t1 AT4G03115 28.151 238 159 6 160 393 16 245 6.95e-13 68.6
MS.gene62427.t1 AT4G03115 28.105 153 103 3 245 397 6 151 7.71e-12 65.5
MS.gene62427.t1 AT2G17270 23.571 280 191 7 124 393 23 289 7.89e-13 69.3
MS.gene62427.t1 AT5G14040 24.643 280 184 8 126 391 85 351 2.45e-12 68.2
MS.gene62427.t1 AT2G39970 23.404 282 174 8 157 397 47 327 2.92e-12 67.8
MS.gene62427.t1 AT1G74240 24.653 288 176 7 136 388 1 282 3.46e-12 67.4
MS.gene62427.t1 AT1G74240 27.027 222 116 7 117 299 76 290 8.02e-11 63.2
MS.gene62427.t1 AT3G48850 27.957 186 126 5 216 397 69 250 8.92e-12 66.6
MS.gene62427.t1 AT3G48850 24.648 284 187 9 124 393 72 342 1.21e-11 66.2
MS.gene62427.t1 AT2G46320 24.234 359 205 11 93 391 1 352 9.16e-12 66.6
MS.gene62427.t1 AT3G54110 24.510 204 135 5 209 396 6 206 6.64e-11 63.5

Find 91 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGTAACCCTTGAAAATT+TGG 0.133521 8.2:-14261247 None:intergenic
TCTGGAATAAAGTTTGATTA+TGG 0.185277 8.2:+14261052 MS.gene62427:CDS
GGGATTGTTCAGGGGAAATT+TGG 0.199928 8.2:+14261522 MS.gene62427:CDS
TTGACCAATGCTTGCAAATA+AGG 0.238535 8.2:-14261095 None:intergenic
GTAATAAGAGTTGGAGGATT+TGG 0.279699 8.2:-14261142 None:intergenic
TGAAGTGTTTCAATCCATTA+TGG 0.286065 8.2:+14261483 MS.gene62427:CDS
AGCATTGGTCAAGCTGGATT+TGG 0.297922 8.2:+14261106 MS.gene62427:CDS
CTGGAATAAAGTTTGATTAT+GGG 0.299137 8.2:+14261053 MS.gene62427:CDS
ATGCAAGCTGGGGCACTAAA+TGG 0.319788 8.2:+14262432 MS.gene62427:CDS
CTTGAAAAGGAAGGGCTTGT+AGG 0.321902 8.2:+14262495 MS.gene62427:CDS
GTAGGCTTATATAGAGGTTT+GGG 0.331916 8.2:+14262513 MS.gene62427:CDS
GATATAGTAATATGCAATTC+TGG 0.338974 8.2:+14261034 MS.gene62427:CDS
TTCGGCTGTTCTCCAAGTTT+AGG 0.342901 8.2:-14261917 None:intergenic
CCATCCATCAACTTCCATAA+TGG 0.348155 8.2:-14261497 None:intergenic
GGATCAATGGCTACTGAATC+TGG 0.350533 8.2:+14261004 None:intergenic
CACCATCAAATGTGTCCTTA+TGG 0.362353 8.2:-14261434 None:intergenic
TGTAGGCTTATATAGAGGTT+TGG 0.364123 8.2:+14262512 MS.gene62427:CDS
ATTCCTGCCTCGTCAATTGC+AGG 0.370605 8.2:+14261947 MS.gene62427:CDS
AGATAATTTGTTGCAGCATA+AGG 0.371375 8.2:-14262267 None:intergenic
CAATCCATTATGGAAGTTGA+TGG 0.371533 8.2:+14261493 MS.gene62427:CDS
ATGGATGGAAGGGATTGTTC+AGG 0.371579 8.2:+14261512 MS.gene62427:CDS
GAATGTGATGACTCTACTAA+TGG 0.373055 8.2:+14262347 MS.gene62427:CDS
GGAGTTTGAAAAGTTGGTTC+AGG 0.374077 8.2:-14261226 None:intergenic
GTGAGAATTGTTAGAGAAGA+AGG 0.392967 8.2:+14262195 MS.gene62427:CDS
CAAAACTCGTCTAACTGTTC+AGG 0.394317 8.2:+14262021 MS.gene62427:CDS
TTAACGTGAAATTCAAGATT+GGG 0.394844 8.2:+14261335 MS.gene62427:CDS
AAATTTGGAGTTTGAAAAGT+TGG 0.400197 8.2:-14261232 None:intergenic
TTTAACGTGAAATTCAAGAT+TGG 0.402407 8.2:+14261334 MS.gene62427:CDS
TTCATCGAAGAGTTAAGTAT+TGG 0.407038 8.2:-14261190 None:intergenic
TAATGGATTGAAACACTTCA+TGG 0.409413 8.2:-14261480 None:intergenic
GACCATAAGGACACATTTGA+TGG 0.414507 8.2:+14261432 MS.gene62427:CDS
CTACTAATGGGATCAGCTGC+TGG 0.434472 8.2:+14262360 MS.gene62427:CDS
TTAAAATTAGTTCCAGCTGC+TGG 0.437971 8.2:+14262546 MS.gene62427:CDS
GGACTGACACCGAGTTTAAT+CGG 0.441637 8.2:+14262237 MS.gene62427:CDS
TTGATAAGTGGGGCAATTGC+TGG 0.443628 8.2:+14261376 MS.gene62427:CDS
GCTCGTAAGCATATGCAAGC+TGG 0.444326 8.2:+14262420 MS.gene62427:CDS
GATAATTTGTTGCAGCATAA+GGG 0.447081 8.2:-14262266 None:intergenic
CTCGTAAGCATATGCAAGCT+GGG 0.452266 8.2:+14262421 MS.gene62427:CDS
ACTCATGAGTATACTTGAAA+AGG 0.453834 8.2:+14262482 MS.gene62427:CDS
TCAAGCTGGATTTGGATTTG+TGG 0.454184 8.2:+14261114 MS.gene62427:CDS
TCAATTGCAGGTGCTGTAGC+TGG 0.456383 8.2:+14261959 MS.gene62427:CDS
AAGCAATTGTCTCCTAAACT+TGG 0.468583 8.2:+14261905 MS.gene62427:CDS
GCAATTGACGAGGCAGGAAT+CGG 0.469551 8.2:-14261944 None:intergenic
TGGATGGAAGGGATTGTTCA+GGG 0.470480 8.2:+14261513 MS.gene62427:CDS
TTTGCAAGCATTGGTCAAGC+TGG 0.476151 8.2:+14261100 MS.gene62427:CDS
TAAAATTAGTTCCAGCTGCT+GGG 0.477871 8.2:+14262547 MS.gene62427:CDS
ATGCTTGCAAATAAGGTAGT+TGG 0.480510 8.2:-14261088 None:intergenic
AAAGTTGTTGAGGAAGGCCT+TGG 0.481700 8.2:+14261283 MS.gene62427:CDS
CTCTAGAGGGTATGTGCATA+GGG 0.484856 8.2:-14261993 None:intergenic
CTTATCAATCTTCTCAGTGA+TGG 0.485399 8.2:-14261361 None:intergenic
AGTCCTCTGTACAACTCTGC+TGG 0.488709 8.2:-14262219 None:intergenic
GGGCTTGTAGGCTTATATAG+AGG 0.496693 8.2:+14262507 MS.gene62427:CDS
CACTGAGAAGATTGATAAGT+GGG 0.502171 8.2:+14261365 MS.gene62427:CDS
ACTACCTTATTTGCAAGCAT+TGG 0.504048 8.2:+14261091 MS.gene62427:CDS
CATTTGATGGTGGGGAGTTG+TGG 0.510279 8.2:+14261445 MS.gene62427:CDS
CTCACCTCAATAGCCTTGCT+TGG 0.514450 8.2:-14261565 None:intergenic
ATGAGTATACTTGAAAAGGA+AGG 0.523641 8.2:+14262486 MS.gene62427:CDS
TGCGCCAAGCAAGGCTATTG+AGG 0.523731 8.2:+14261561 MS.gene62427:CDS
ATGAAAGAAATCCCAGCAGC+TGG 0.530670 8.2:-14262558 None:intergenic
GCTCTAGAGGGTATGTGCAT+AGG 0.536360 8.2:-14261994 None:intergenic
AATGTGATGACTCTACTAAT+GGG 0.537491 8.2:+14262348 MS.gene62427:CDS
ATGGAAGTTGATGGATGGAA+GGG 0.542398 8.2:+14261502 MS.gene62427:CDS
TGGCACCGTTAGAGACCATA+AGG 0.551000 8.2:+14261419 MS.gene62427:CDS
TATGGAAGTTGATGGATGGA+AGG 0.556490 8.2:+14261501 MS.gene62427:CDS
AATGGATTGAAACACTTCAT+GGG 0.569210 8.2:-14261479 None:intergenic
CATCCGAGTTGCGCCAAGCA+AGG 0.570638 8.2:+14261552 MS.gene62427:CDS
TGCTTACGAGCCACCTCGAG+TGG 0.570787 8.2:-14262408 None:intergenic
CCATTATGGAAGTTGATGGA+TGG 0.573515 8.2:+14261497 MS.gene62427:CDS
GCACCTGCAATTGACGAGGC+AGG 0.574219 8.2:-14261950 None:intergenic
GCATTGAAAGTTGTTGAGGA+AGG 0.574680 8.2:+14261277 MS.gene62427:CDS
GAAGGCCTTGGCATGATGAA+AGG 0.575006 8.2:+14261295 MS.gene62427:CDS
TAGCCTTGCTTGGCGCAACT+CGG 0.575028 8.2:-14261555 None:intergenic
TCACTGAGAAGATTGATAAG+TGG 0.580771 8.2:+14261364 MS.gene62427:CDS
TGAGTATACTTGAAAAGGAA+GGG 0.583036 8.2:+14262487 MS.gene62427:CDS
TAAGGACACATTTGATGGTG+GGG 0.590066 8.2:+14261437 MS.gene62427:CDS
ATAAGGACACATTTGATGGT+GGG 0.598424 8.2:+14261436 MS.gene62427:CDS
TGTGTCCTTATGGTCTCTAA+CGG 0.599716 8.2:-14261424 None:intergenic
TGTGTTACGAAGCTTGCAAG+AGG 0.600032 8.2:+14262580 MS.gene62427:CDS
GGATGGAAGGGATTGTTCAG+GGG 0.604327 8.2:+14261514 MS.gene62427:CDS
CATAAGGACACATTTGATGG+TGG 0.614477 8.2:+14261435 MS.gene62427:CDS
TCAAGGGTTACTTAATGGTG+CGG 0.622503 8.2:+14261255 MS.gene62427:CDS
GGGATTACACCGATTAAACT+CGG 0.653059 8.2:-14262246 None:intergenic
TGCGGCATTGAAAGTTGTTG+AGG 0.653533 8.2:+14261273 MS.gene62427:CDS
TCGTAAGCATATGCAAGCTG+GGG 0.656654 8.2:+14262422 MS.gene62427:CDS
CAGTGCAACATTCCCACTCG+AGG 0.656752 8.2:+14262395 MS.gene62427:CDS
TGCAACATTCCCACTCGAGG+TGG 0.657208 8.2:+14262398 MS.gene62427:CDS
GCTTACGAGCCACCTCGAGT+GGG 0.658789 8.2:-14262407 None:intergenic
TGCAGTGTCAAGAACAGTTG+TGG 0.671233 8.2:+14261399 MS.gene62427:CDS
TACAGCACCTGCAATTGACG+AGG 0.676153 8.2:-14261954 None:intergenic
GGTCCAGCAGAGTTGTACAG+AGG 0.692859 8.2:+14262216 MS.gene62427:CDS
ACTGAGAAGATTGATAAGTG+GGG 0.720696 8.2:+14261366 MS.gene62427:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAGGAAAAAATTTGAA+GGG + chr8.2:14261310-14261329 MS.gene62427:CDS 20.0%
!!! AACTTTTGTAACATAAACAA+TGG + chr8.2:14262088-14262107 MS.gene62427:intron 20.0%
!!! ACTAACAAATATGTAACTTT+TGG + chr8.2:14261810-14261829 MS.gene62427:intron 20.0%
!!! TAATATTTTTACACTCACAA+AGG - chr8.2:14261699-14261718 None:intergenic 20.0%
!!! TTATGTATGTTTTGTAATCT+TGG + chr8.2:14261597-14261616 MS.gene62427:intron 20.0%
! CTGGAATAAAGTTTGATTAT+GGG + chr8.2:14261053-14261072 MS.gene62427:CDS 25.0%
! GATATAGTAATATGCAATTC+TGG + chr8.2:14261034-14261053 MS.gene62427:CDS 25.0%
! GATGAAAGGAAAAAATTTGA+AGG + chr8.2:14261309-14261328 MS.gene62427:CDS 25.0%
! TGAAAGGAAAAAATTTGAAG+GGG + chr8.2:14261311-14261330 MS.gene62427:CDS 25.0%
! TTAACGTGAAATTCAAGATT+GGG + chr8.2:14261335-14261354 MS.gene62427:CDS 25.0%
! TTAAGTAACCCTTGAAAATT+TGG - chr8.2:14261250-14261269 None:intergenic 25.0%
! TTTAACGTGAAATTCAAGAT+TGG + chr8.2:14261334-14261353 MS.gene62427:CDS 25.0%
! TTTATGCTTAATTGTAGAGA+GGG + chr8.2:14262145-14262164 MS.gene62427:intron 25.0%
!! AAATTTGGAGTTTGAAAAGT+TGG - chr8.2:14261235-14261254 None:intergenic 25.0%
!! AGTTTTTGCAAGTTTATATC+AGG + chr8.2:14261657-14261676 MS.gene62427:intron 25.0%
!! CAAGAAAGCTTTTAATAAAG+AGG + chr8.2:14262317-14262336 MS.gene62427:CDS 25.0%
!! CTTTTAATAAAGAGGAAGTT+GGG + chr8.2:14262325-14262344 MS.gene62427:CDS 25.0%
!! TCTCTTTTAGTAATAAGAGT+TGG - chr8.2:14261154-14261173 None:intergenic 25.0%
!! TCTGGAATAAAGTTTGATTA+TGG + chr8.2:14261052-14261071 MS.gene62427:CDS 25.0%
!! TTCAAACTCCAAATTTTCAA+GGG + chr8.2:14261239-14261258 MS.gene62427:CDS 25.0%
!! TTTCAAACTCCAAATTTTCA+AGG + chr8.2:14261238-14261257 MS.gene62427:CDS 25.0%
!!! AATTTTCAAGGGTTACTTAA+TGG + chr8.2:14261250-14261269 MS.gene62427:CDS 25.0%
AATGTGATGACTCTACTAAT+GGG + chr8.2:14262348-14262367 MS.gene62427:CDS 30.0%
ACTCATGAGTATACTTGAAA+AGG + chr8.2:14262482-14262501 MS.gene62427:CDS 30.0%
ATGAGTATACTTGAAAAGGA+AGG + chr8.2:14262486-14262505 MS.gene62427:CDS 30.0%
GTTTATGCTTAATTGTAGAG+AGG + chr8.2:14262144-14262163 MS.gene62427:intron 30.0%
TGAGTATACTTGAAAAGGAA+GGG + chr8.2:14262487-14262506 MS.gene62427:CDS 30.0%
TTATGCTTAATTGTAGAGAG+GGG + chr8.2:14262146-14262165 MS.gene62427:intron 30.0%
TTCATCGAAGAGTTAAGTAT+TGG - chr8.2:14261193-14261212 None:intergenic 30.0%
! CTTTTAGTAATAAGAGTTGG+AGG - chr8.2:14261151-14261170 None:intergenic 30.0%
! GCTTTTAATAAAGAGGAAGT+TGG + chr8.2:14262324-14262343 MS.gene62427:CDS 30.0%
! TGAAGTGTTTCAATCCATTA+TGG + chr8.2:14261483-14261502 MS.gene62427:CDS 30.0%
!! AATGGATTGAAACACTTCAT+GGG - chr8.2:14261482-14261501 None:intergenic 30.0%
!! AGATAATTTGTTGCAGCATA+AGG - chr8.2:14262270-14262289 None:intergenic 30.0%
!! GATAATTTGTTGCAGCATAA+GGG - chr8.2:14262269-14262288 None:intergenic 30.0%
!! TAATGGATTGAAACACTTCA+TGG - chr8.2:14261483-14261502 None:intergenic 30.0%
!! TTGATAATTTTGCTCTCACA+TGG + chr8.2:14262065-14262084 MS.gene62427:intron 30.0%
AAGCAATTGTCTCCTAAACT+TGG + chr8.2:14261905-14261924 MS.gene62427:CDS 35.0%
ACTGAGAAGATTGATAAGTG+GGG + chr8.2:14261366-14261385 MS.gene62427:CDS 35.0%
ATGCTTGCAAATAAGGTAGT+TGG - chr8.2:14261091-14261110 None:intergenic 35.0%
CAATCCATTATGGAAGTTGA+TGG + chr8.2:14261493-14261512 MS.gene62427:CDS 35.0%
CACTGAGAAGATTGATAAGT+GGG + chr8.2:14261365-14261384 MS.gene62427:CDS 35.0%
CTTATCAATCTTCTCAGTGA+TGG - chr8.2:14261364-14261383 None:intergenic 35.0%
GAATGTGATGACTCTACTAA+TGG + chr8.2:14262347-14262366 MS.gene62427:CDS 35.0%
GTAATAAGAGTTGGAGGATT+TGG - chr8.2:14261145-14261164 None:intergenic 35.0%
GTAGGCTTATATAGAGGTTT+GGG + chr8.2:14262513-14262532 MS.gene62427:CDS 35.0%
GTGAGAATTGTTAGAGAAGA+AGG + chr8.2:14262195-14262214 MS.gene62427:CDS 35.0%
TAAAATTAGTTCCAGCTGCT+GGG + chr8.2:14262547-14262566 MS.gene62427:CDS 35.0%
TAAGCATAAACTCGTATCAG+TGG - chr8.2:14262135-14262154 None:intergenic 35.0%
TCACTGAGAAGATTGATAAG+TGG + chr8.2:14261364-14261383 MS.gene62427:CDS 35.0%
TGTAGGCTTATATAGAGGTT+TGG + chr8.2:14262512-14262531 MS.gene62427:CDS 35.0%
TTAAAATTAGTTCCAGCTGC+TGG + chr8.2:14262546-14262565 MS.gene62427:CDS 35.0%
TTGACCAATGCTTGCAAATA+AGG - chr8.2:14261098-14261117 None:intergenic 35.0%
! ACTACCTTATTTGCAAGCAT+TGG + chr8.2:14261091-14261110 MS.gene62427:CDS 35.0%
! ATAAGGACACATTTGATGGT+GGG + chr8.2:14261436-14261455 MS.gene62427:CDS 35.0%
! GGAACTAATTTTAAGCAGCT+TGG - chr8.2:14262540-14262559 None:intergenic 35.0%
! TTTTTCCTTTCATCATGCCA+AGG - chr8.2:14261303-14261322 None:intergenic 35.0%
!!! GTTAAGTATTGGACGTTTTG+TGG - chr8.2:14261182-14261201 None:intergenic 35.0%
CAAAACTCGTCTAACTGTTC+AGG + chr8.2:14262021-14262040 MS.gene62427:CDS 40.0%
CACCATCAAATGTGTCCTTA+TGG - chr8.2:14261437-14261456 None:intergenic 40.0%
CATAAACTCGTATCAGTGGT+GGG - chr8.2:14262131-14262150 None:intergenic 40.0%
CATAAGGACACATTTGATGG+TGG + chr8.2:14261435-14261454 MS.gene62427:CDS 40.0%
CCATCCATCAACTTCCATAA+TGG - chr8.2:14261500-14261519 None:intergenic 40.0%
GACCATAAGGACACATTTGA+TGG + chr8.2:14261432-14261451 MS.gene62427:CDS 40.0%
GCATTGAAAGTTGTTGAGGA+AGG + chr8.2:14261277-14261296 MS.gene62427:CDS 40.0%
TCAAGCTGGATTTGGATTTG+TGG + chr8.2:14261114-14261133 MS.gene62427:CDS 40.0%
TCAAGGGTTACTTAATGGTG+CGG + chr8.2:14261255-14261274 MS.gene62427:CDS 40.0%
TGTGTCCTTATGGTCTCTAA+CGG - chr8.2:14261427-14261446 None:intergenic 40.0%
! GGAGTTTGAAAAGTTGGTTC+AGG - chr8.2:14261229-14261248 None:intergenic 40.0%
! GGGATTACACCGATTAAACT+CGG - chr8.2:14262249-14262268 None:intergenic 40.0%
!! AGGGGTGTACAAGAATTTTG+TGG + chr8.2:14262164-14262183 MS.gene62427:CDS 40.0%
!! ATGGAAGTTGATGGATGGAA+GGG + chr8.2:14261502-14261521 MS.gene62427:CDS 40.0%
!! CCATTATGGAAGTTGATGGA+TGG + chr8.2:14261497-14261516 MS.gene62427:CDS 40.0%
!! TAAGGACACATTTGATGGTG+GGG + chr8.2:14261437-14261456 MS.gene62427:CDS 40.0%
!! TATGGAAGTTGATGGATGGA+AGG + chr8.2:14261501-14261520 MS.gene62427:CDS 40.0%
!!! GAGTTTTGAGTAGCTCTAGA+GGG - chr8.2:14262009-14262028 None:intergenic 40.0%
AAAGTTGTTGAGGAAGGCCT+TGG + chr8.2:14261283-14261302 MS.gene62427:CDS 45.0%
ATGAAAGAAATCCCAGCAGC+TGG - chr8.2:14262561-14262580 None:intergenic 45.0%
ATGGATGGAAGGGATTGTTC+AGG + chr8.2:14261512-14261531 MS.gene62427:CDS 45.0%
CTCGTAAGCATATGCAAGCT+GGG + chr8.2:14262421-14262440 MS.gene62427:CDS 45.0%
CTTGAAAAGGAAGGGCTTGT+AGG + chr8.2:14262495-14262514 MS.gene62427:CDS 45.0%
GCATAAACTCGTATCAGTGG+TGG - chr8.2:14262132-14262151 None:intergenic 45.0%
GGACTGACACCGAGTTTAAT+CGG + chr8.2:14262237-14262256 MS.gene62427:CDS 45.0%
GGGATTGTTCAGGGGAAATT+TGG + chr8.2:14261522-14261541 MS.gene62427:CDS 45.0%
GGGCTTGTAGGCTTATATAG+AGG + chr8.2:14262507-14262526 MS.gene62427:CDS 45.0%
TCGTAAGCATATGCAAGCTG+GGG + chr8.2:14262422-14262441 MS.gene62427:CDS 45.0%
TGCAGTGTCAAGAACAGTTG+TGG + chr8.2:14261399-14261418 MS.gene62427:CDS 45.0%
TGGATGGAAGGGATTGTTCA+GGG + chr8.2:14261513-14261532 MS.gene62427:CDS 45.0%
TGTGTTACGAAGCTTGCAAG+AGG + chr8.2:14262580-14262599 MS.gene62427:CDS 45.0%
TTCGGCTGTTCTCCAAGTTT+AGG - chr8.2:14261920-14261939 None:intergenic 45.0%
TTGATAAGTGGGGCAATTGC+TGG + chr8.2:14261376-14261395 MS.gene62427:CDS 45.0%
! CTCTAGAGGGTATGTGCATA+GGG - chr8.2:14261996-14262015 None:intergenic 45.0%
! GAGGCAGGAATCGGAATTTT+CGG - chr8.2:14261938-14261957 None:intergenic 45.0%
! TGCGGCATTGAAAGTTGTTG+AGG + chr8.2:14261273-14261292 MS.gene62427:CDS 45.0%
!! AGCATTGGTCAAGCTGGATT+TGG + chr8.2:14261106-14261125 MS.gene62427:CDS 45.0%
!! TTTGCAAGCATTGGTCAAGC+TGG + chr8.2:14261100-14261119 MS.gene62427:CDS 45.0%
!!! CGAGTTTTGAGTAGCTCTAG+AGG - chr8.2:14262010-14262029 None:intergenic 45.0%
AGTCCTCTGTACAACTCTGC+TGG - chr8.2:14262222-14262241 None:intergenic 50.0%
ATTCCTGCCTCGTCAATTGC+AGG + chr8.2:14261947-14261966 MS.gene62427:CDS 50.0%
CTACTAATGGGATCAGCTGC+TGG + chr8.2:14262360-14262379 MS.gene62427:CDS 50.0%
GAAGGCCTTGGCATGATGAA+AGG + chr8.2:14261295-14261314 MS.gene62427:CDS 50.0%
GCAATTGACGAGGCAGGAAT+CGG - chr8.2:14261947-14261966 None:intergenic 50.0%
GCTCGTAAGCATATGCAAGC+TGG + chr8.2:14262420-14262439 MS.gene62427:CDS 50.0%
GGATGGAAGGGATTGTTCAG+GGG + chr8.2:14261514-14261533 MS.gene62427:CDS 50.0%
TACAGCACCTGCAATTGACG+AGG - chr8.2:14261957-14261976 None:intergenic 50.0%
TGGCACCGTTAGAGACCATA+AGG + chr8.2:14261419-14261438 MS.gene62427:CDS 50.0%
! ATGCAAGCTGGGGCACTAAA+TGG + chr8.2:14262432-14262451 MS.gene62427:CDS 50.0%
! CTCACCTCAATAGCCTTGCT+TGG - chr8.2:14261568-14261587 None:intergenic 50.0%
! TCAATTGCAGGTGCTGTAGC+TGG + chr8.2:14261959-14261978 MS.gene62427:CDS 50.0%
!! CATTTGATGGTGGGGAGTTG+TGG + chr8.2:14261445-14261464 MS.gene62427:CDS 50.0%
!! GCTCTAGAGGGTATGTGCAT+AGG - chr8.2:14261997-14262016 None:intergenic 50.0%
CAGTGCAACATTCCCACTCG+AGG + chr8.2:14262395-14262414 MS.gene62427:CDS 55.0%
GGTCCAGCAGAGTTGTACAG+AGG + chr8.2:14262216-14262235 MS.gene62427:CDS 55.0%
TGCAACATTCCCACTCGAGG+TGG + chr8.2:14262398-14262417 MS.gene62427:CDS 55.0%
TGCGCCAAGCAAGGCTATTG+AGG + chr8.2:14261561-14261580 MS.gene62427:CDS 55.0%
! TAGCCTTGCTTGGCGCAACT+CGG - chr8.2:14261558-14261577 None:intergenic 55.0%
CATCCGAGTTGCGCCAAGCA+AGG + chr8.2:14261552-14261571 MS.gene62427:CDS 60.0%
GCACCTGCAATTGACGAGGC+AGG - chr8.2:14261953-14261972 None:intergenic 60.0%
GCTTACGAGCCACCTCGAGT+GGG - chr8.2:14262410-14262429 None:intergenic 60.0%
TGCTTACGAGCCACCTCGAG+TGG - chr8.2:14262411-14262430 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 14261010 14262629 14261010 ID=MS.gene62427
chr8.2 mRNA 14261010 14262629 14261010 ID=MS.gene62427.t1;Parent=MS.gene62427
chr8.2 exon 14261010 14261582 14261010 ID=MS.gene62427.t1.exon1;Parent=MS.gene62427.t1
chr8.2 CDS 14261010 14261582 14261010 ID=cds.MS.gene62427.t1;Parent=MS.gene62427.t1
chr8.2 exon 14261881 14262042 14261881 ID=MS.gene62427.t1.exon2;Parent=MS.gene62427.t1
chr8.2 CDS 14261881 14262042 14261881 ID=cds.MS.gene62427.t1;Parent=MS.gene62427.t1
chr8.2 exon 14262162 14262629 14262162 ID=MS.gene62427.t1.exon3;Parent=MS.gene62427.t1
chr8.2 CDS 14262162 14262629 14262162 ID=cds.MS.gene62427.t1;Parent=MS.gene62427.t1
Gene Sequence

>MS.gene62427

ATGGCTACTGAATCTGGTTATAGAGATATAGTAATATGCAATTCTGGAATAAAGTTTGATTATGGGACTAATCTTCATCCAACTACCTTATTTGCAAGCATTGGTCAAGCTGGATTTGGATTTGTGGCTTCACCAAATCCTCCAACTCTTATTACTAAAAGAGATAGTGCCACAAAACGTCCAATACTTAACTCTTCGATGAAATATGCTTTAATACCTGAACCAACTTTTCAAACTCCAAATTTTCAAGGGTTACTTAATGGTGCGGCATTGAAAGTTGTTGAGGAAGGCCTTGGCATGATGAAAGGAAAAAATTTGAAGGGGTTTAACGTGAAATTCAAGATTGGGAATCCATCACTGAGAAGATTGATAAGTGGGGCAATTGCTGGTGCAGTGTCAAGAACAGTTGTGGCACCGTTAGAGACCATAAGGACACATTTGATGGTGGGGAGTTGTGGACATAATACAACCCATGAAGTGTTTCAATCCATTATGGAAGTTGATGGATGGAAGGGATTGTTCAGGGGAAATTTGGTGAATATCATCCGAGTTGCGCCAAGCAAGGCTATTGAGGTGAGTACGACAATTTATGTATGTTTTGTAATCTTGGATTAGAAGATATCATGATAGATGTATGTGATCATTTGAGTTTTTGCAAGTTTATATCAGGTTAGTTTAATTCATGTCCTTTGTGAGTGTAAAAATATTATACACAATCAATCGTAATCGTCAAATCATTAAAAACGTTTGAATTTAATCGTCACTATTTCTAAAGTCACACATATCGTCATATCATTATAACTAACAAATATGTAACTTTTGGCATGAGTTCAACATATTGACACTGTGATTACATGTTAATGACGTGCAGTTATTTGCATATGATACTGTCAAGAAGCAATTGTCTCCTAAACTTGGAGAACAGCCGAAAATTCCGATTCCTGCCTCGTCAATTGCAGGTGCTGTAGCTGGAGTTAGCTCTACCCTATGCACATACCCTCTAGAGCTACTCAAAACTCGTCTAACTGTTCAGGTGTGCACTCAATGATAGAAACTTGATAATTTTGCTCTCACATGGAACTTTTGTAACATAAACAATGGTGTAATACATTGATGATCCCACCACTGATACGAGTTTATGCTTAATTGTAGAGAGGGGTGTACAAGAATTTTGTGGATGCATTTGTGAGAATTGTTAGAGAAGAAGGTCCAGCAGAGTTGTACAGAGGACTGACACCGAGTTTAATCGGTGTAATCCCTTATGCTGCAACAAATTATCTAGCTTATGACACACTTAGAAAAGCTTACAAGAAAGCTTTTAATAAAGAGGAAGTTGGGAATGTGATGACTCTACTAATGGGATCAGCTGCTGGAGCATTTTCATGCAGTGCAACATTCCCACTCGAGGTGGCTCGTAAGCATATGCAAGCTGGGGCACTAAATGGAAGACAATACAGTAATATGTTTCAAGCACTCATGAGTATACTTGAAAAGGAAGGGCTTGTAGGCTTATATAGAGGTTTGGGACCAAGCTGCTTAAAATTAGTTCCAGCTGCTGGGATTTCTTTCATGTGTTACGAAGCTTGCAAGAGGTTACTTGTTGAAAATGAAGAAAATTAG

Protein sequence

>MS.gene62427.t1

MATESGYRDIVICNSGIKFDYGTNLHPTTLFASIGQAGFGFVASPNPPTLITKRDSATKRPILNSSMKYALIPEPTFQTPNFQGLLNGAALKVVEEGLGMMKGKNLKGFNVKFKIGNPSLRRLISGAIAGAVSRTVVAPLETIRTHLMVGSCGHNTTHEVFQSIMEVDGWKGLFRGNLVNIIRVAPSKAIELFAYDTVKKQLSPKLGEQPKIPIPASSIAGAVAGVSSTLCTYPLELLKTRLTVQRGVYKNFVDAFVRIVREEGPAELYRGLTPSLIGVIPYAATNYLAYDTLRKAYKKAFNKEEVGNVMTLLMGSAAGAFSCSATFPLEVARKHMQAGALNGRQYSNMFQALMSILEKEGLVGLYRGLGPSCLKLVPAAGISFMCYEACKRLLVENEEN