Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003687.01.T01 | XP_013468326.1 | 96.498 | 257 | 9 | 0 | 1 | 257 | 1 | 257 | 0 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003687.01.T01 | G7ZZJ2 | 96.498 | 257 | 9 | 0 | 1 | 257 | 1 | 257 | 0.0 | 507 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0180003687.01 | -0.809797 | 1.584410e-50 | 9.391824e-48 |
| MsG0080048347.01 | MsG0180003687.01 | 0.810590 | 1.068852e-50 | 6.469037e-48 |
| MsG0080048352.01 | MsG0180003687.01 | 0.812507 | 4.095435e-51 | 2.608760e-48 |
| MsG0080048800.01 | MsG0180003687.01 | -0.818855 | 1.576558e-52 | 1.193845e-49 |
| MsG0080048919.01 | MsG0180003687.01 | -0.802074 | 6.667013e-49 | 3.235685e-46 |
| MsG0080048986.01 | MsG0180003687.01 | -0.823371 | 1.435770e-53 | 1.233793e-50 |
| MsG0080049038.01 | MsG0180003687.01 | -0.821622 | 3.661405e-53 | 2.994046e-50 |
| MsG0080049066.01 | MsG0180003687.01 | -0.835434 | 1.681597e-56 | 2.056100e-53 |
| MsG0080049076.01 | MsG0180003687.01 | -0.806065 | 9.855730e-50 | 5.298927e-47 |
| MsG0080049133.01 | MsG0180003687.01 | -0.831238 | 1.869678e-55 | 2.016753e-52 |
| MsG0180000019.01 | MsG0180003687.01 | 0.800508 | 1.394435e-48 | 6.504325e-46 |
| MsG0180000337.01 | MsG0180003687.01 | 0.840307 | 9.405865e-58 | 1.334275e-54 |
| MsG0180000467.01 | MsG0180003687.01 | -0.800056 | 1.724062e-48 | 7.950131e-46 |
| MsG0180000583.01 | MsG0180003687.01 | 0.806847 | 6.742082e-50 | 3.698140e-47 |
| MsG0180000719.01 | MsG0180003687.01 | -0.803447 | 3.471654e-49 | 1.744966e-46 |
| MsG0180001072.01 | MsG0180003687.01 | -0.807389 | 5.177692e-50 | 2.880237e-47 |
| MsG0180001925.01 | MsG0180003687.01 | -0.847271 | 1.285424e-59 | 2.272462e-56 |
| MsG0180002099.01 | MsG0180003687.01 | -0.842199 | 2.991994e-58 | 4.502100e-55 |
| MsG0180002214.01 | MsG0180003687.01 | -0.859984 | 2.833553e-63 | 7.625969e-60 |
| MsG0180002426.01 | MsG0180003687.01 | -0.821147 | 4.711612e-53 | 3.802344e-50 |
| MsG0180002546.01 | MsG0180003687.01 | -0.823619 | 1.256201e-53 | 1.087225e-50 |
| MsG0180003672.01 | MsG0180003687.01 | 0.905218 | 5.412229e-80 | 8.665933e-76 |
| MsG0180003687.01 | MsG0180003757.01 | -0.834788 | 2.447268e-56 | 2.934474e-53 |
| MsG0180003687.01 | MsG0180003758.01 | -0.816956 | 4.231455e-52 | 3.041464e-49 |
| MsG0180003687.01 | MsG0180003779.01 | -0.800061 | 1.719697e-48 | 7.931150e-46 |
| MsG0180003687.01 | MsG0180004301.01 | -0.820614 | 6.249523e-53 | 4.968789e-50 |
| MsG0180003687.01 | MsG0180004502.01 | -0.818207 | 2.210497e-52 | 1.644107e-49 |
| MsG0180003687.01 | MsG0180004761.01 | -0.801562 | 8.490251e-49 | 4.067303e-46 |
| MsG0180003687.01 | MsG0180005272.01 | 0.800848 | 1.188588e-48 | 5.592418e-46 |
| MsG0180003687.01 | MsG0180005369.01 | -0.820333 | 7.248474e-53 | 5.718600e-50 |
| MsG0180003687.01 | MsG0180005542.01 | 0.804105 | 2.533718e-49 | 1.295283e-46 |
| MsG0180003687.01 | MsG0180005791.01 | -0.822704 | 2.053865e-53 | 1.732193e-50 |
| MsG0180003687.01 | MsG0180005817.01 | -0.847972 | 8.242682e-60 | 1.490102e-56 |
| MsG0180003687.01 | MsG0180005847.01 | -0.818095 | 2.343396e-52 | 1.737498e-49 |
| MsG0180003687.01 | MsG0180005848.01 | -0.829312 | 5.523036e-55 | 5.632969e-52 |
| MsG0180003687.01 | MsG0180006212.01 | -0.823686 | 1.211805e-53 | 1.050888e-50 |
| MsG0180003687.01 | MsG0180006227.01 | -0.826296 | 2.932963e-54 | 2.739420e-51 |
| MsG0180003687.01 | MsG0280006381.01 | -0.810154 | 1.326951e-50 | 7.939338e-48 |
| MsG0180003687.01 | MsG0280006475.01 | -0.807342 | 5.296835e-50 | 2.942899e-47 |
| MsG0180003687.01 | MsG0280006883.01 | 0.821030 | 5.014804e-53 | 4.034147e-50 |
| MsG0180003687.01 | MsG0280007216.01 | 0.818109 | 2.326552e-52 | 1.725745e-49 |
| MsG0180003687.01 | MsG0280007291.01 | -0.814888 | 1.225039e-51 | 8.319643e-49 |
| MsG0180003687.01 | MsG0280007649.01 | -0.808699 | 2.724669e-50 | 1.568451e-47 |
| MsG0180003687.01 | MsG0280007650.01 | -0.813336 | 2.695292e-51 | 1.755250e-48 |
| MsG0180003687.01 | MsG0280007786.01 | 0.802918 | 4.465520e-49 | 2.214390e-46 |
| MsG0180003687.01 | MsG0280008405.01 | 0.823740 | 1.176901e-53 | 1.022190e-50 |
| MsG0180003687.01 | MsG0280008820.01 | -0.820469 | 6.746001e-53 | 5.342566e-50 |
| MsG0180003687.01 | MsG0280008912.01 | -0.818476 | 1.921922e-52 | 1.440191e-49 |
| MsG0180003687.01 | MsG0280009079.01 | -0.800546 | 1.369904e-48 | 6.396094e-46 |
| MsG0180003687.01 | MsG0280009394.01 | 0.846207 | 2.510359e-59 | 4.288237e-56 |
| MsG0180003687.01 | MsG0280009541.01 | -0.802502 | 5.442174e-49 | 2.670145e-46 |
| MsG0180003687.01 | MsG0280009742.01 | -0.839114 | 1.922401e-57 | 2.628427e-54 |
| MsG0180003687.01 | MsG0280009864.01 | -0.856276 | 3.589687e-62 | 8.521015e-59 |
| MsG0180003687.01 | MsG0280009971.01 | 0.837271 | 5.734013e-57 | 7.409659e-54 |
| MsG0180003687.01 | MsG0280010227.01 | -0.826798 | 2.225759e-54 | 2.108904e-51 |
| MsG0180003687.01 | MsG0280010240.01 | 0.801644 | 8.168296e-49 | 3.921144e-46 |
| MsG0180003687.01 | MsG0280010695.01 | -0.806634 | 7.477526e-50 | 4.078760e-47 |
| MsG0180003687.01 | MsG0280010780.01 | -0.806783 | 6.956150e-50 | 3.809047e-47 |
| MsG0180003687.01 | MsG0280011042.01 | 0.802911 | 4.480434e-49 | 2.221394e-46 |
| MsG0180003687.01 | MsG0280011299.01 | -0.811369 | 7.248058e-51 | 4.478246e-48 |
| MsG0180003687.01 | MsG0280011301.01 | -0.816258 | 6.067818e-52 | 4.278603e-49 |
| MsG0180003687.01 | MsG0380011613.01 | 0.804600 | 1.998771e-49 | 1.034869e-46 |
| MsG0180003687.01 | MsG0380012148.01 | -0.802565 | 5.281894e-49 | 2.595625e-46 |
| MsG0180003687.01 | MsG0380012281.01 | -0.814825 | 1.265060e-51 | 8.577280e-49 |
| MsG0180003687.01 | MsG0380013114.01 | -0.829510 | 4.944782e-55 | 5.071303e-52 |
| MsG0180003687.01 | MsG0380013300.01 | 0.828413 | 9.117768e-55 | 9.056402e-52 |
| MsG0180003687.01 | MsG0380013473.01 | -0.822653 | 2.110892e-53 | 1.777754e-50 |
| MsG0180003687.01 | MsG0380013945.01 | -0.818121 | 2.312859e-52 | 1.716167e-49 |
| MsG0180003687.01 | MsG0380013953.01 | -0.806301 | 8.793282e-50 | 4.756010e-47 |
| MsG0180003687.01 | MsG0380013956.01 | -0.823466 | 1.364597e-53 | 1.175842e-50 |
| MsG0180003687.01 | MsG0380013957.01 | -0.818491 | 1.907049e-52 | 1.429596e-49 |
| MsG0180003687.01 | MsG0380013967.01 | -0.820507 | 6.612642e-53 | 5.242105e-50 |
| MsG0180003687.01 | MsG0380013971.01 | -0.825152 | 5.477313e-54 | 4.952430e-51 |
| MsG0180003687.01 | MsG0380013977.01 | -0.821605 | 3.693447e-53 | 3.018817e-50 |
| MsG0180003687.01 | MsG0380014005.01 | -0.807169 | 5.764867e-50 | 3.188512e-47 |
| MsG0180003687.01 | MsG0380014023.01 | -0.819623 | 1.053719e-52 | 8.150366e-50 |
| MsG0180003687.01 | MsG0380014032.01 | -0.814191 | 1.746880e-51 | 1.164304e-48 |
| MsG0180003687.01 | MsG0380014410.01 | 0.816782 | 4.630771e-52 | 3.312394e-49 |
| MsG0180003687.01 | MsG0380014642.01 | -0.829860 | 4.063042e-55 | 4.210686e-52 |
| MsG0180003687.01 | MsG0380014735.01 | -0.844549 | 7.056438e-59 | 1.143243e-55 |
| MsG0180003687.01 | MsG0380015200.01 | -0.803173 | 3.955642e-49 | 1.974336e-46 |
| MsG0180003687.01 | MsG0380015201.01 | -0.825391 | 4.810223e-54 | 4.378400e-51 |
| MsG0180003687.01 | MsG0380015348.01 | -0.816439 | 5.526603e-52 | 3.915968e-49 |
| MsG0180003687.01 | MsG0380015629.01 | 0.800379 | 1.481925e-48 | 6.890015e-46 |
| MsG0180003687.01 | MsG0380015752.01 | -0.835861 | 1.311133e-56 | 1.623779e-53 |
| MsG0180003687.01 | MsG0380016056.01 | -0.806802 | 6.892501e-50 | 3.776102e-47 |
| MsG0180003687.01 | MsG0380016790.01 | -0.800340 | 1.509302e-48 | 7.010374e-46 |
| MsG0180003687.01 | MsG0380016835.01 | -0.814772 | 1.299463e-51 | 8.797816e-49 |
| MsG0180003687.01 | MsG0380016881.01 | -0.812226 | 4.715636e-51 | 2.981375e-48 |
| MsG0180003687.01 | MsG0380016889.01 | -0.812003 | 5.274157e-51 | 3.314191e-48 |
| MsG0180003687.01 | MsG0380016931.01 | -0.838417 | 2.912287e-57 | 3.898238e-54 |
| MsG0180003687.01 | MsG0380016934.01 | -0.824150 | 9.435164e-54 | 8.288987e-51 |
| MsG0180003687.01 | MsG0380016935.01 | -0.841521 | 4.517707e-58 | 6.655561e-55 |
| MsG0180003687.01 | MsG0380017405.01 | -0.842986 | 1.849271e-58 | 2.852034e-55 |
| MsG0180003687.01 | MsG0380017406.01 | -0.827854 | 1.243212e-54 | 1.214852e-51 |
| MsG0180003687.01 | MsG0380017690.01 | 0.815265 | 1.010318e-51 | 6.932495e-49 |
| MsG0180003687.01 | MsG0380017812.01 | -0.827113 | 1.871546e-54 | 1.789681e-51 |
| MsG0180003687.01 | MsG0380017928.01 | -0.807887 | 4.057159e-50 | 2.286282e-47 |
| MsG0180003687.01 | MsG0380017962.01 | -0.816604 | 5.075840e-52 | 3.613052e-49 |
| MsG0180003687.01 | MsG0380018026.01 | 0.809020 | 2.326054e-50 | 1.350459e-47 |
| MsG0180003687.01 | MsG0480018201.01 | -0.806735 | 7.120004e-50 | 3.894072e-47 |
| MsG0180003687.01 | MsG0480018463.01 | -0.814419 | 1.555581e-51 | 1.043288e-48 |
| MsG0180003687.01 | MsG0480018626.01 | -0.827333 | 1.657355e-54 | 1.595340e-51 |
| MsG0180003687.01 | MsG0480018628.01 | -0.822142 | 2.774777e-53 | 2.302923e-50 |
| MsG0180003687.01 | MsG0480019726.01 | 0.816552 | 5.215621e-52 | 3.707054e-49 |
| MsG0180003687.01 | MsG0480019861.01 | -0.808488 | 3.021559e-50 | 1.729937e-47 |
| MsG0180003687.01 | MsG0480019975.01 | -0.801303 | 9.595635e-49 | 4.566985e-46 |
| MsG0180003687.01 | MsG0480020841.01 | -0.804993 | 1.653913e-49 | 8.650759e-47 |
| MsG0180003687.01 | MsG0480020842.01 | -0.809779 | 1.598306e-50 | 9.469930e-48 |
| MsG0180003687.01 | MsG0480020958.01 | 0.818867 | 1.566205e-52 | 1.186384e-49 |
| MsG0180003687.01 | MsG0480021131.01 | 0.821003 | 5.087672e-53 | 4.089787e-50 |
| MsG0180003687.01 | MsG0480021205.01 | -0.812166 | 4.861047e-51 | 3.068135e-48 |
| MsG0180003687.01 | MsG0480021327.01 | -0.847223 | 1.324879e-59 | 2.338657e-56 |
| MsG0180003687.01 | MsG0480021331.01 | -0.840318 | 9.343741e-58 | 1.325902e-54 |
| MsG0180003687.01 | MsG0480021912.01 | -0.820734 | 5.865483e-53 | 4.679152e-50 |
| MsG0180003687.01 | MsG0480022125.01 | 0.829133 | 6.103631e-55 | 6.191209e-52 |
| MsG0180003687.01 | MsG0480022591.01 | -0.824759 | 6.781420e-54 | 6.063071e-51 |
| MsG0180003687.01 | MsG0480022721.01 | 0.818356 | 2.045364e-52 | 1.527689e-49 |
| MsG0180003687.01 | MsG0480023107.01 | 0.807384 | 5.189229e-50 | 2.886305e-47 |
| MsG0180003687.01 | MsG0480023152.01 | -0.858950 | 5.794456e-63 | 1.504804e-59 |
| MsG0180003687.01 | MsG0480023187.01 | -0.804454 | 2.143436e-49 | 1.105594e-46 |
| MsG0180003687.01 | MsG0480023481.01 | -0.808416 | 3.130036e-50 | 1.788686e-47 |
| MsG0180003687.01 | MsG0480023695.01 | -0.816003 | 6.916298e-52 | 4.842870e-49 |
| MsG0180003687.01 | MsG0580024493.01 | -0.832542 | 8.910446e-56 | 9.990230e-53 |
| MsG0180003687.01 | MsG0580025105.01 | -0.804929 | 1.706062e-49 | 8.909321e-47 |
| MsG0180003687.01 | MsG0580025830.01 | -0.806696 | 7.256494e-50 | 3.964629e-47 |
| MsG0180003687.01 | MsG0580027325.01 | -0.815911 | 7.250928e-52 | 5.064137e-49 |
| MsG0180003687.01 | MsG0580027646.01 | 0.809687 | 1.672734e-50 | 9.886579e-48 |
| MsG0180003687.01 | MsG0580028999.01 | 0.812640 | 3.828775e-51 | 2.447443e-48 |
| MsG0180003687.01 | MsG0580029583.01 | 0.821364 | 4.198674e-53 | 3.408766e-50 |
| MsG0180003687.01 | MsG0580029792.01 | -0.812984 | 3.218955e-51 | 2.076335e-48 |
| MsG0180003687.01 | MsG0580030019.01 | 0.802624 | 5.134917e-49 | 2.527312e-46 |
| MsG0180003687.01 | MsG0580030133.01 | 0.805682 | 1.186574e-49 | 6.317303e-47 |
| MsG0180003687.01 | MsG0580030197.01 | -0.820993 | 5.112353e-53 | 4.108518e-50 |
| MsG0180003687.01 | MsG0580030237.01 | -0.810267 | 1.254966e-50 | 7.530592e-48 |
| MsG0180003687.01 | MsG0680030315.01 | 0.834545 | 2.818110e-56 | 3.355175e-53 |
| MsG0180003687.01 | MsG0680030439.01 | -0.812638 | 3.833104e-51 | 2.450085e-48 |
| MsG0180003687.01 | MsG0680031813.01 | -0.826332 | 2.874818e-54 | 2.687885e-51 |
| MsG0180003687.01 | MsG0680034229.01 | -0.826961 | 2.035420e-54 | 1.937865e-51 |
| MsG0180003687.01 | MsG0680035584.01 | -0.835442 | 1.674217e-56 | 2.047541e-53 |
| MsG0180003687.01 | MsG0680035841.01 | 0.845358 | 4.269485e-59 | 7.096887e-56 |
| MsG0180003687.01 | MsG0780036661.01 | 0.802185 | 6.326077e-49 | 3.078794e-46 |
| MsG0180003687.01 | MsG0780037458.01 | -0.814265 | 1.682099e-51 | 1.123411e-48 |
| MsG0180003687.01 | MsG0780037751.01 | 0.801996 | 6.918055e-49 | 3.350746e-46 |
| MsG0180003687.01 | MsG0780038030.01 | -0.806097 | 9.704647e-50 | 5.221815e-47 |
| MsG0180003687.01 | MsG0780038047.01 | -0.833863 | 4.175939e-56 | 4.871146e-53 |
| MsG0180003687.01 | MsG0780038197.01 | -0.816593 | 5.105979e-52 | 3.633310e-49 |
| MsG0180003687.01 | MsG0780038924.01 | 0.800089 | 1.697125e-48 | 7.832650e-46 |
| MsG0180003687.01 | MsG0780038939.01 | 0.804684 | 1.919350e-49 | 9.959379e-47 |
| MsG0180003687.01 | MsG0780039190.01 | 0.803730 | 3.032354e-49 | 1.535310e-46 |
| MsG0180003687.01 | MsG0780039334.01 | 0.811063 | 8.445081e-51 | 5.176121e-48 |
| MsG0180003687.01 | MsG0780039821.01 | -0.817254 | 3.627436e-52 | 2.628302e-49 |
| MsG0180003687.01 | MsG0780039836.01 | -0.822006 | 2.984182e-53 | 2.467071e-50 |
| MsG0180003687.01 | MsG0780039838.01 | -0.853257 | 2.693220e-61 | 5.784329e-58 |
| MsG0180003687.01 | MsG0780039839.01 | -0.854314 | 1.337144e-61 | 2.973924e-58 |
| MsG0180003687.01 | MsG0780039968.01 | 0.812921 | 3.323196e-51 | 2.139927e-48 |
| MsG0180003687.01 | MsG0780040121.01 | -0.826833 | 2.183005e-54 | 2.070515e-51 |
| MsG0180003687.01 | MsG0780040144.01 | 0.807226 | 5.605091e-50 | 3.104802e-47 |
| MsG0180003687.01 | MsG0780040480.01 | 0.826519 | 2.594283e-54 | 2.438511e-51 |
| MsG0180003687.01 | MsG0780041121.01 | -0.805772 | 1.135755e-49 | 6.060843e-47 |
| MsG0180003687.01 | MsG0780041173.01 | -0.805744 | 1.151482e-49 | 6.140376e-47 |
| MsG0180003687.01 | MsG0780041198.01 | 0.807948 | 3.939376e-50 | 2.223483e-47 |
| MsG0180003687.01 | MsG0780041254.01 | -0.834525 | 2.849737e-56 | 3.390947e-53 |
| MsG0180003687.01 | MsG0780041316.01 | 0.803233 | 3.844154e-49 | 1.921591e-46 |
| MsG0180003687.01 | MsG0780041531.01 | -0.810090 | 1.370179e-50 | 8.183956e-48 |
| MsG0180003687.01 | MsG0780041556.01 | 0.801774 | 7.684071e-49 | 3.700824e-46 |
| MsG0180003687.01 | MsG0780041620.01 | -0.821254 | 4.451955e-53 | 3.603294e-50 |
| MsG0180003687.01 | MsG0780041637.01 | -0.829433 | 5.161978e-55 | 5.282388e-52 |
| MsG0180003687.01 | MsG0780041691.01 | -0.813233 | 2.839786e-51 | 1.844026e-48 |
| MsG0180003687.01 | MsG0780041720.01 | -0.839437 | 1.585606e-57 | 2.189677e-54 |
| MsG0180003687.01 | MsG0780041783.01 | -0.846910 | 1.613674e-59 | 2.819892e-56 |
| MsG0180003687.01 | MsG0880041855.01 | -0.807721 | 4.401100e-50 | 2.469477e-47 |
| MsG0180003687.01 | MsG0880042810.01 | 0.800869 | 1.177263e-48 | 5.542050e-46 |
| MsG0180003687.01 | MsG0880042858.01 | -0.838463 | 2.832782e-57 | 3.797246e-54 |
| MsG0180003687.01 | MsG0880043364.01 | 0.807186 | 5.716218e-50 | 3.163046e-47 |
| MsG0180003687.01 | MsG0880043481.01 | 0.800102 | 1.687016e-48 | 7.788441e-46 |
| MsG0180003687.01 | MsG0880043744.01 | 0.800517 | 1.388972e-48 | 6.480321e-46 |
| MsG0180003687.01 | MsG0880043828.01 | 0.856292 | 3.551467e-62 | 8.434298e-59 |
| MsG0180003687.01 | MsG0880044339.01 | -0.803280 | 3.758157e-49 | 1.880862e-46 |
| MsG0180003687.01 | MsG0880045188.01 | -0.827765 | 1.305387e-54 | 1.272239e-51 |
| MsG0180003687.01 | MsG0880045369.01 | -0.821645 | 3.617492e-53 | 2.960088e-50 |
| MsG0180003687.01 | MsG0880045385.01 | -0.835378 | 1.737980e-56 | 2.121557e-53 |
| MsG0180003687.01 | MsG0880045413.01 | -0.805380 | 1.372845e-49 | 7.252182e-47 |
| MsG0180003687.01 | MsG0880045683.01 | 0.822214 | 2.670408e-53 | 2.220810e-50 |
| MsG0180003687.01 | MsG0880045968.01 | -0.824560 | 7.554460e-54 | 6.715268e-51 |
| MsG0180003687.01 | MsG0880046105.01 | -0.802678 | 5.005054e-49 | 2.466729e-46 |
| MsG0180003687.01 | MsG0880046219.01 | -0.834443 | 2.988355e-56 | 3.546933e-53 |
| MsG0180003687.01 | MsG0880046341.01 | -0.848471 | 6.000714e-60 | 1.102572e-56 |
| MsG0180003687.01 | MsG0880046429.01 | 0.814171 | 1.764399e-51 | 1.175344e-48 |
| MsG0180003687.01 | MsG0880046469.01 | -0.845206 | 4.691465e-59 | 7.760368e-56 |
| MsG0180003687.01 | MsG0880046822.01 | 0.822505 | 2.285716e-53 | 1.916822e-50 |
| MsG0180003687.01 | MsG0880046996.01 | 0.808697 | 2.726358e-50 | 1.569366e-47 |
| MsG0180003687.01 | MsG0880047318.01 | -0.831286 | 1.819780e-55 | 1.965762e-52 |
| MsG0180003687.01 | MsG0880047486.01 | 0.804394 | 2.206443e-49 | 1.136326e-46 |
| MsG0180003687.01 | MsG0880047493.01 | 0.828769 | 7.478991e-55 | 7.505028e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180003687.01 | MsG0180003672.01 | PPI |
| MsG0180003687.01 | MsG0180003712.01 | PPI |
| MsG0780040858.01 | MsG0180003687.01 | PPI |
| MsG0180003672.01 | MsG0180003687.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003687.01.T01 | MTR_1g068825 | 96.498 | 257 | 9 | 0 | 1 | 257 | 1 | 257 | 0.0 | 507 |
| MsG0180003687.01.T01 | MTR_7g099950 | 44.314 | 255 | 125 | 5 | 1 | 243 | 85 | 334 | 4.24e-35 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003687.01.T01 | AT3G53670 | 41.007 | 139 | 76 | 4 | 78 | 215 | 66 | 199 | 2.76e-15 | 72.8 |
| MsG0180003687.01.T01 | AT3G53670 | 41.007 | 139 | 76 | 4 | 78 | 215 | 66 | 199 | 2.76e-15 | 72.8 |
| MsG0180003687.01.T01 | AT2G37480 | 42.520 | 127 | 54 | 4 | 73 | 193 | 58 | 171 | 2.75e-14 | 69.7 |
| MsG0180003687.01.T01 | AT2G37480 | 41.732 | 127 | 54 | 4 | 73 | 193 | 58 | 170 | 1.96e-13 | 67.4 |
Find 88 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTACAAACGTGTCGTTTA+AGG | 0.134390 | 1:-66619569 | MsG0180003687.01.T01:intron |
| AAGCGATTTCAGATCGAAAT+TGG | 0.164469 | 1:+66619917 | None:intergenic |
| AAATGAAATTGTCTGTTAAA+TGG | 0.168633 | 1:-66617706 | MsG0180003687.01.T01:CDS |
| TTATTTATGCAGTCTTGATA+TGG | 0.236888 | 1:+66617266 | None:intergenic |
| TGATGATAAGAAAGCGAAAT+TGG | 0.267644 | 1:+66620131 | None:intergenic |
| AATCCTTTGCCACAAGATTC+TGG | 0.274308 | 1:+66617509 | None:intergenic |
| GGTAGTAGTAACTGTAATAT+TGG | 0.282358 | 1:-66618680 | MsG0180003687.01.T01:CDS |
| AGTAAACTTGAAATTACTTT+TGG | 0.301816 | 1:-66618764 | MsG0180003687.01.T01:CDS |
| CTTGAAGGCAACACCGTATC+AGG | 0.316264 | 1:+66618572 | None:intergenic |
| GTAGTAGTAACTGTAATATT+GGG | 0.335267 | 1:-66618679 | MsG0180003687.01.T01:CDS |
| TTTCTCGCGGCTACCCTTCA+TGG | 0.337552 | 1:+66617742 | None:intergenic |
| TCCGACATGGCAAGGACTTT+CGG | 0.354930 | 1:+66617403 | None:intergenic |
| CACTCTCCTGCGAATGTTGT+CGG | 0.355819 | 1:-66618800 | MsG0180003687.01.T01:CDS |
| TTAAATAATCTCGACGTTGC+TGG | 0.364240 | 1:-66617470 | MsG0180003687.01.T01:CDS |
| TGCAATTTGATTCCGTTTCA+CGG | 0.366326 | 1:-66619839 | MsG0180003687.01.T01:five_prime_UTR |
| TATTTATGCAGTCTTGATAT+GGG | 0.394789 | 1:+66617267 | None:intergenic |
| AGATCGAAGAACATGCGAAA+TGG | 0.409219 | 1:+66619970 | None:intergenic |
| AATGAAATTGTCTGTTAAAT+GGG | 0.413068 | 1:-66617705 | MsG0180003687.01.T01:CDS |
| CAAAGGATTTGATGCTTCAA+TGG | 0.415687 | 1:-66617495 | MsG0180003687.01.T01:CDS |
| CGAAATGGATCTGAGAGTTA+TGG | 0.419952 | 1:+66619985 | None:intergenic |
| TTGATTCACGGTTGAATTTG+AGG | 0.426338 | 1:-66619671 | MsG0180003687.01.T01:five_prime_UTR |
| ATTCCAAGAGATACATTGAT+TGG | 0.426598 | 1:+66617177 | None:intergenic |
| AACAAAACAAAACTCTCATA+TGG | 0.430420 | 1:-66620086 | MsG0180003687.01.T01:five_prime_UTR |
| AACCTTTCCTTATCCTGATA+CGG | 0.431985 | 1:-66618585 | MsG0180003687.01.T01:CDS |
| AATTGCGAAAATCTCAAAAC+AGG | 0.441311 | 1:+66619595 | None:intergenic |
| TAAATAATTAGTTTCCTGTT+CGG | 0.446370 | 1:-66617250 | MsG0180003687.01.T01:three_prime_UTR |
| TCGTCATCAGAAGAGCTTGA+AGG | 0.452918 | 1:+66618557 | None:intergenic |
| TGGGAAATCCTTTGTTCGAT+CGG | 0.453138 | 1:+66619937 | None:intergenic |
| GACTTATGCAGTCTTGATAT+AGG | 0.453851 | 1:+66617308 | None:intergenic |
| AGCGATTTCAGATCGAAATT+GGG | 0.457477 | 1:+66619918 | None:intergenic |
| TCTTCTTCACACAACCGAAC+AGG | 0.460962 | 1:+66617236 | None:intergenic |
| CATATGTGGTGGGTTTGAAC+AGG | 0.469286 | 1:-66618648 | MsG0180003687.01.T01:CDS |
| TCCAGACTCGGTTTCTCAGC+CGG | 0.470198 | 1:-66618492 | MsG0180003687.01.T01:intron |
| ACCGGCTGAGAAACCGAGTC+TGG | 0.472530 | 1:+66618491 | None:intergenic |
| ACTCTCCTGCGAATGTTGTC+GGG | 0.473024 | 1:-66618799 | MsG0180003687.01.T01:CDS |
| GACTTATGCAGTCTTGATAT+AGG | 0.475805 | 1:+66617349 | None:intergenic |
| TGGCAAGGACTTTCGGTAGC+TGG | 0.476961 | 1:+66617410 | None:intergenic |
| AGAAGCAGTATCGCTATAGA+TGG | 0.477970 | 1:-66617532 | MsG0180003687.01.T01:CDS |
| GTGTGATCTTATACGATTGA+TGG | 0.483125 | 1:-66618828 | MsG0180003687.01.T01:exon |
| TCTGATGACGAGGAGGCTGA+TGG | 0.485008 | 1:-66618545 | MsG0180003687.01.T01:CDS |
| CTCTACACAACTTCCAGACT+CGG | 0.490684 | 1:-66618504 | MsG0180003687.01.T01:CDS |
| GGCAACACCGTATCAGGATA+AGG | 0.496540 | 1:+66618578 | None:intergenic |
| CATGTTCTTCGATCTTCGAT+CGG | 0.503699 | 1:-66619962 | MsG0180003687.01.T01:five_prime_UTR |
| GGCACCGGATCATACACATC+AGG | 0.503927 | 1:+66617680 | None:intergenic |
| CAGAAGGGCAGCTATTCTAA+AGG | 0.505063 | 1:-66617572 | MsG0180003687.01.T01:CDS |
| TGGCCAATCAATGTATCTCT+TGG | 0.506192 | 1:-66617180 | MsG0180003687.01.T01:three_prime_UTR |
| ATGTTGTTTCTTAGTTCTCA+CGG | 0.517557 | 1:+66617640 | None:intergenic |
| AAAGAAGATCCACCGTGAAA+CGG | 0.518001 | 1:+66619827 | None:intergenic |
| TTGACTTCAAAGATTGTGAA+AGG | 0.525582 | 1:-66619634 | MsG0180003687.01.T01:five_prime_UTR |
| ACTAAAAGTGAGGAGCTTGA+AGG | 0.525677 | 1:-66618615 | MsG0180003687.01.T01:CDS |
| AGAAGGGCAGCTATTCTAAA+GGG | 0.525902 | 1:-66617571 | MsG0180003687.01.T01:CDS |
| AAAACTTGTATCTGCCATGA+AGG | 0.537609 | 1:-66617756 | MsG0180003687.01.T01:CDS |
| GATCGGTTCCGATCGAACAA+AGG | 0.548374 | 1:-66619945 | MsG0180003687.01.T01:five_prime_UTR |
| GGGTAGCCGCGAGAAACACT+TGG | 0.556191 | 1:-66617735 | MsG0180003687.01.T01:CDS |
| TGGCCAGAATCTTGTGGCAA+AGG | 0.557338 | 1:-66617512 | MsG0180003687.01.T01:CDS |
| TGCTCATAGCTTCTCCGACA+TGG | 0.557738 | 1:+66617390 | None:intergenic |
| CGACAACATTCGCAGGAGAG+TGG | 0.559396 | 1:+66618801 | None:intergenic |
| AGGTGTAAAGAAAAGTCAGA+AGG | 0.565051 | 1:-66617588 | MsG0180003687.01.T01:CDS |
| GAATTCGAATCGAATCGAAT+CGG | 0.573482 | 1:+66620016 | None:intergenic |
| CTAAGAAACAACATAAATCC+CGG | 0.580812 | 1:-66617631 | MsG0180003687.01.T01:CDS |
| ATTGGGGAGGGACACATATG+TGG | 0.592835 | 1:-66618662 | MsG0180003687.01.T01:CDS |
| ATAGCTTCTCCGACATGGCA+AGG | 0.593291 | 1:+66617395 | None:intergenic |
| AGTAACTGTAATATTGGGGA+GGG | 0.594128 | 1:-66618674 | MsG0180003687.01.T01:CDS |
| GGCCCCTGATGTGTATGATC+CGG | 0.600130 | 1:-66617684 | MsG0180003687.01.T01:CDS |
| ATCAAGAAGAGTGAAAAGAA+AGG | 0.600790 | 1:-66617608 | MsG0180003687.01.T01:CDS |
| TCGCACCCGACAACATTCGC+AGG | 0.602135 | 1:+66618794 | None:intergenic |
| TGTGACGACAATGTTGGCAC+CGG | 0.602355 | 1:+66617665 | None:intergenic |
| TAGTAGTAACTGTAATATTG+GGG | 0.605374 | 1:-66618678 | MsG0180003687.01.T01:CDS |
| TGATATAGGAGACAAAATCA+AGG | 0.608502 | 1:+66617363 | None:intergenic |
| TTCAAGCTCTTCTGATGACG+AGG | 0.614405 | 1:-66618555 | MsG0180003687.01.T01:CDS |
| GGTGTAAAGAAAAGTCAGAA+GGG | 0.615586 | 1:-66617587 | MsG0180003687.01.T01:CDS |
| GGGGAGGGACACATATGTGG+TGG | 0.617375 | 1:-66618659 | MsG0180003687.01.T01:CDS |
| ACGGTATGTGACGACAATGT+TGG | 0.618744 | 1:+66617659 | None:intergenic |
| GGGAGGGACACATATGTGGT+GGG | 0.620596 | 1:-66618658 | MsG0180003687.01.T01:CDS |
| AAACTTGTATCTGCCATGAA+GGG | 0.622758 | 1:-66617755 | MsG0180003687.01.T01:CDS |
| GCACCGGATCATACACATCA+GGG | 0.623292 | 1:+66617681 | None:intergenic |
| ACCGAAAGTCCTTGCCATGT+CGG | 0.626598 | 1:-66617404 | MsG0180003687.01.T01:CDS |
| CACCGTATCAGGATAAGGAA+AGG | 0.628831 | 1:+66618583 | None:intergenic |
| TATAGATGGCCAGAATCTTG+TGG | 0.629442 | 1:-66617518 | MsG0180003687.01.T01:CDS |
| GGTAGCCGCGAGAAACACTT+GGG | 0.637014 | 1:-66617734 | MsG0180003687.01.T01:CDS |
| TAGTAACTGTAATATTGGGG+AGG | 0.638150 | 1:-66618675 | MsG0180003687.01.T01:CDS |
| ACATGTATCTGATGATGATG+AGG | 0.654147 | 1:-66618705 | MsG0180003687.01.T01:CDS |
| AAGCTCTTCTGATGACGAGG+AGG | 0.662047 | 1:-66618552 | MsG0180003687.01.T01:CDS |
| AAGAAACCACACTAAAAGTG+AGG | 0.668513 | 1:-66618625 | MsG0180003687.01.T01:CDS |
| GCGATCCCAAGTGTTTCTCG+CGG | 0.669443 | 1:+66617729 | None:intergenic |
| CACCGGATCATACACATCAG+GGG | 0.699399 | 1:+66617682 | None:intergenic |
| GTATCTGATGATGATGAGGA+TGG | 0.713196 | 1:-66618701 | MsG0180003687.01.T01:CDS |
| AATTTGATTCCGTTTCACGG+TGG | 0.736766 | 1:-66619836 | MsG0180003687.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGATGAAAAAACTT+TGG | + | Chr1:66617569-66617588 | None:intergenic | 15.0% |
| !! | AATACAAAATTGAAAATTCA+TGG | + | Chr1:66617826-66617845 | None:intergenic | 15.0% |
| !!! | AACATACACTTTATTTTAAA+TGG | - | Chr1:66619303-66619322 | MsG0180003687.01.T01:intron | 15.0% |
| !!! | AAGTTTTTTCATCTATTTTT+TGG | - | Chr1:66617569-66617588 | MsG0180003687.01.T01:CDS | 15.0% |
| !!! | ACATACACTTTATTTTAAAT+GGG | - | Chr1:66619304-66619323 | MsG0180003687.01.T01:intron | 15.0% |
| !! | AAATGAAATTGTCTGTTAAA+TGG | - | Chr1:66619582-66619601 | MsG0180003687.01.T01:five_prime_UTR | 20.0% |
| !! | AATGAAATTGTCTGTTAAAT+GGG | - | Chr1:66619583-66619602 | MsG0180003687.01.T01:five_prime_UTR | 20.0% |
| !! | GCTAATTAATGAATATAACA+AGG | - | Chr1:66618002-66618021 | MsG0180003687.01.T01:intron | 20.0% |
| !! | TAAGAAATGTAGTTTATGTT+TGG | - | Chr1:66618871-66618890 | MsG0180003687.01.T01:intron | 20.0% |
| !! | TAATTAGCCATATAAATTGT+CGG | + | Chr1:66617990-66618009 | None:intergenic | 20.0% |
| !! | TCAACAAATTAGATAGTTAA+CGG | + | Chr1:66618163-66618182 | None:intergenic | 20.0% |
| !! | TTTACAATATTAGTGTATAG+TGG | - | Chr1:66618241-66618260 | MsG0180003687.01.T01:intron | 20.0% |
| !!! | ACTTTATTTTAAATGGGAAA+GGG | - | Chr1:66619310-66619329 | MsG0180003687.01.T01:intron | 20.0% |
| !!! | AGTAAACTTGAAATTACTTT+TGG | - | Chr1:66618524-66618543 | MsG0180003687.01.T01:CDS | 20.0% |
| !!! | TAAATAATTAGTTTCCTGTT+CGG | - | Chr1:66620038-66620057 | MsG0180003687.01.T01:five_prime_UTR | 20.0% |
| ! | AAATGTAGTTTATGTTTGGA+CGG | - | Chr1:66618875-66618894 | MsG0180003687.01.T01:intron | 25.0% |
| ! | AACAAAACAAAACTCTCATA+TGG | - | Chr1:66617202-66617221 | MsG0180003687.01.T01:three_prime_UTR | 25.0% |
| ! | AACATCTTGAAAAAAGTGAT+AGG | - | Chr1:66617495-66617514 | MsG0180003687.01.T01:CDS | 25.0% |
| ! | AAGTGTATGTTTGTATCATA+TGG | + | Chr1:66619055-66619074 | None:intergenic | 25.0% |
| ! | ATATTAGTGTATAGTGGTAT+TGG | - | Chr1:66618247-66618266 | MsG0180003687.01.T01:intron | 25.0% |
| ! | ATATTTGCCGACAATTTATA+TGG | - | Chr1:66617980-66617999 | MsG0180003687.01.T01:intron | 25.0% |
| ! | CTATATTCAACCTAGAAATT+AGG | + | Chr1:66617802-66617821 | None:intergenic | 25.0% |
| ! | GTAGTAGTAACTGTAATATT+GGG | - | Chr1:66618609-66618628 | MsG0180003687.01.T01:CDS | 25.0% |
| ! | TAGTAGTAACTGTAATATTG+GGG | - | Chr1:66618610-66618629 | MsG0180003687.01.T01:CDS | 25.0% |
| ! | TATGATTCAACCTAATTTCT+AGG | - | Chr1:66617789-66617808 | MsG0180003687.01.T01:intron | 25.0% |
| ! | TATTTATGCAGTCTTGATAT+GGG | + | Chr1:66620024-66620043 | None:intergenic | 25.0% |
| ! | TTATTTATGCAGTCTTGATA+TGG | + | Chr1:66620025-66620044 | None:intergenic | 25.0% |
| !! | AGTGTATGTTTTGTATCATA+TGG | + | Chr1:66619293-66619312 | None:intergenic | 25.0% |
| !! | CTAATTTCTAGGTTGAATAT+AGG | - | Chr1:66617800-66617819 | MsG0180003687.01.T01:intron | 25.0% |
| !! | TATGTTTTGTATCATATGGA+GGG | + | Chr1:66619289-66619308 | None:intergenic | 25.0% |
| !!! | AAACTTGAAATTACTTTTGG+TGG | - | Chr1:66618527-66618546 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | AAATCGCTTTTGTTACAATT+AGG | - | Chr1:66617385-66617404 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | AACTTGAAATTACTTTTGGT+GGG | - | Chr1:66618528-66618547 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | AATCGCTTTTGTTACAATTA+GGG | - | Chr1:66617386-66617405 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | ACATACACTTTATTTTGAAG+TGG | - | Chr1:66619065-66619084 | MsG0180003687.01.T01:intron | 25.0% |
| !!! | ATCAGTGACAATTTTTTATC+AGG | - | Chr1:66617909-66617928 | MsG0180003687.01.T01:intron | 25.0% |
| !!! | ATTTTTTGGAGTATTTCTTC+TGG | - | Chr1:66617583-66617602 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | CACTTTATTTTAAATGGGAA+AGG | - | Chr1:66619309-66619328 | MsG0180003687.01.T01:intron | 25.0% |
| !!! | GAAGAAGAGTTTTTTGTTTA+CGG | - | Chr1:66620067-66620086 | MsG0180003687.01.T01:five_prime_UTR | 25.0% |
| !!! | GTTTTGTGAATTTTGATTCA+CGG | - | Chr1:66617605-66617624 | MsG0180003687.01.T01:CDS | 25.0% |
| !!! | TGTGTTTTTTCTGTTAATTG+AGG | + | Chr1:66617238-66617257 | None:intergenic | 25.0% |
| AATTGCGAAAATCTCAAAAC+AGG | + | Chr1:66617696-66617715 | None:intergenic | 30.0% | |
| ATCAAGAAGAGTGAAAAGAA+AGG | - | Chr1:66619680-66619699 | MsG0180003687.01.T01:five_prime_UTR | 30.0% | |
| ATTCCAAGAGATACATTGAT+TGG | + | Chr1:66620114-66620133 | None:intergenic | 30.0% | |
| CTAAGAAACAACATAAATCC+CGG | - | Chr1:66619657-66619676 | MsG0180003687.01.T01:five_prime_UTR | 30.0% | |
| GGTAGTAGTAACTGTAATAT+TGG | - | Chr1:66618608-66618627 | MsG0180003687.01.T01:CDS | 30.0% | |
| GGTTAATTGTGTTCAATTGT+TGG | + | Chr1:66618044-66618063 | None:intergenic | 30.0% | |
| GTATGTTTGTATCATATGGT+GGG | + | Chr1:66619051-66619070 | None:intergenic | 30.0% | |
| TGAACACAATTAGAACTTAC+CGG | + | Chr1:66618818-66618837 | None:intergenic | 30.0% | |
| TGATATAGGAGACAAAATCA+AGG | + | Chr1:66619928-66619947 | None:intergenic | 30.0% | |
| TGATGATAAGAAAGCGAAAT+TGG | + | Chr1:66617160-66617179 | None:intergenic | 30.0% | |
| TGTATGTTTGTATCATATGG+TGG | + | Chr1:66619052-66619071 | None:intergenic | 30.0% | |
| TTGACTTCAAAGATTGTGAA+AGG | - | Chr1:66617654-66617673 | MsG0180003687.01.T01:CDS | 30.0% | |
| ! | AACGAAACTAAAAAAGCGTA+AGG | + | Chr1:66617539-66617558 | None:intergenic | 30.0% |
| ! | CTATAGCTTTTGTAAAACCA+CGG | + | Chr1:66618927-66618946 | None:intergenic | 30.0% |
| ! | GTATGTTTTGTATCATATGG+AGG | + | Chr1:66619290-66619309 | None:intergenic | 30.0% |
| ! | TTATGCTAGATGCATTGTTT+TGG | - | Chr1:66619193-66619212 | MsG0180003687.01.T01:intron | 30.0% |
| ! | TTTTCTCTGTATTATACCAC+AGG | - | Chr1:66619502-66619521 | MsG0180003687.01.T01:intron | 30.0% |
| !! | ATGTTGTTTCTTAGTTCTCA+CGG | + | Chr1:66619651-66619670 | None:intergenic | 30.0% |
| !! | GAAAGAACTTTTGACTCATT+CGG | - | Chr1:66619087-66619106 | MsG0180003687.01.T01:intron | 30.0% |
| !!! | ATAGTTTTGTCGAGCATAAT+TGG | - | Chr1:66619443-66619462 | MsG0180003687.01.T01:intron | 30.0% |
| !!! | GTTTTGTCGATTTGTTCTTT+GGG | - | Chr1:66618432-66618451 | MsG0180003687.01.T01:intron | 30.0% |
| !!! | TGTTTTGTCGATTTGTTCTT+TGG | - | Chr1:66618431-66618450 | MsG0180003687.01.T01:intron | 30.0% |
| AAAACTTGTATCTGCCATGA+AGG | - | Chr1:66619532-66619551 | MsG0180003687.01.T01:intron | 35.0% | |
| AAACTTGTATCTGCCATGAA+GGG | - | Chr1:66619533-66619552 | MsG0180003687.01.T01:intron | 35.0% | |
| AACCTTTCCTTATCCTGATA+CGG | - | Chr1:66618703-66618722 | MsG0180003687.01.T01:CDS | 35.0% | |
| AAGAAACCACACTAAAAGTG+AGG | - | Chr1:66618663-66618682 | MsG0180003687.01.T01:CDS | 35.0% | |
| AAGCGATTTCAGATCGAAAT+TGG | + | Chr1:66617374-66617393 | None:intergenic | 35.0% | |
| AAGTAAAACAGTCGACACAT+AGG | + | Chr1:66618357-66618376 | None:intergenic | 35.0% | |
| ACGGTTTGACACATTTAAGT+TGG | + | Chr1:66618144-66618163 | None:intergenic | 35.0% | |
| AGCGATTTCAGATCGAAATT+GGG | + | Chr1:66617373-66617392 | None:intergenic | 35.0% | |
| AGGTGTAAAGAAAAGTCAGA+AGG | - | Chr1:66619700-66619719 | MsG0180003687.01.T01:five_prime_UTR | 35.0% | |
| AGTAACTGTAATATTGGGGA+GGG | - | Chr1:66618614-66618633 | MsG0180003687.01.T01:CDS | 35.0% | |
| ATGCAGCTTTCACATAATCA+CGG | - | Chr1:66619240-66619259 | MsG0180003687.01.T01:intron | 35.0% | |
| ATGGTAAGTGATGTTCCAAA+GGG | + | Chr1:66618068-66618087 | None:intergenic | 35.0% | |
| CAAAGGATTTGATGCTTCAA+TGG | - | Chr1:66619793-66619812 | MsG0180003687.01.T01:five_prime_UTR | 35.0% | |
| CAGGATTTATGAGCTATGAA+TGG | - | Chr1:66617928-66617947 | MsG0180003687.01.T01:intron | 35.0% | |
| CTCATTCAACAAATAGAAGC+TGG | - | Chr1:66619339-66619358 | MsG0180003687.01.T01:intron | 35.0% | |
| GAAATTACTGTGAACAACTG+TGG | - | Chr1:66618954-66618973 | MsG0180003687.01.T01:intron | 35.0% | |
| GAATAGTAGACAATGTTGTC+TGG | - | Chr1:66618213-66618232 | MsG0180003687.01.T01:intron | 35.0% | |
| GAATTCGAATCGAATCGAAT+CGG | + | Chr1:66617275-66617294 | None:intergenic | 35.0% | |
| GACTTATGCAGTCTTGATAT+AGG | + | Chr1:66619942-66619961 | None:intergenic | 35.0% | |
| GGAAGTAATCAACAAGAAGA+AGG | + | Chr1:66618315-66618334 | None:intergenic | 35.0% | |
| GGTGTAAAGAAAAGTCAGAA+GGG | - | Chr1:66619701-66619720 | MsG0180003687.01.T01:five_prime_UTR | 35.0% | |
| GGTTAAAAACTATTCAGTGC+TGG | - | Chr1:66620088-66620107 | MsG0180003687.01.T01:five_prime_UTR | 35.0% | |
| GTGTGATCTTATACGATTGA+TGG | - | Chr1:66618460-66618479 | MsG0180003687.01.T01:intron | 35.0% | |
| TAGTAACTGTAATATTGGGG+AGG | - | Chr1:66618613-66618632 | MsG0180003687.01.T01:CDS | 35.0% | |
| TGCAATTTGATTCCGTTTCA+CGG | - | Chr1:66617449-66617468 | MsG0180003687.01.T01:CDS | 35.0% | |
| TTAAATAATCTCGACGTTGC+TGG | - | Chr1:66619818-66619837 | MsG0180003687.01.T01:five_prime_UTR | 35.0% | |
| TTGATTCACGGTTGAATTTG+AGG | - | Chr1:66617617-66617636 | MsG0180003687.01.T01:CDS | 35.0% | |
| TTGTAGCTTTCACACAATCA+CGG | - | Chr1:66619002-66619021 | MsG0180003687.01.T01:intron | 35.0% | |
| TTGTGAACACTTGCAAATCA+TGG | + | Chr1:66618087-66618106 | None:intergenic | 35.0% | |
| ! | ACATGTATCTGATGATGATG+AGG | - | Chr1:66618583-66618602 | MsG0180003687.01.T01:CDS | 35.0% |
| ! | GTTCTGAACAATAAGACACT+AGG | + | Chr1:66617859-66617878 | None:intergenic | 35.0% |
| ! | TCTTTTCACTCTTCTTGATC+CGG | + | Chr1:66619679-66619698 | None:intergenic | 35.0% |
| !! | ATCTACAAACGTGTCGTTTA+AGG | - | Chr1:66617719-66617738 | MsG0180003687.01.T01:CDS | 35.0% |
| !!! | TTGTTTTGGTCGAGCATAAT+TGG | - | Chr1:66619207-66619226 | MsG0180003687.01.T01:intron | 35.0% |
| !!! | TTTTTGAGATGCTAGTTGCA+TGG | + | Chr1:66619856-66619875 | None:intergenic | 35.0% |
| AAAGAAGATCCACCGTGAAA+CGG | + | Chr1:66617464-66617483 | None:intergenic | 40.0% | |
| AATCCTTTGCCACAAGATTC+TGG | + | Chr1:66619782-66619801 | None:intergenic | 40.0% | |
| AATTTGATTCCGTTTCACGG+TGG | - | Chr1:66617452-66617471 | MsG0180003687.01.T01:CDS | 40.0% | |
| ACGGTTGCCCATAATGATTT+CGG | + | Chr1:66618908-66618927 | None:intergenic | 40.0% | |
| ACTAAAAGTGAGGAGCTTGA+AGG | - | Chr1:66618673-66618692 | MsG0180003687.01.T01:CDS | 40.0% | |
| AGAAGCAGTATCGCTATAGA+TGG | - | Chr1:66619756-66619775 | MsG0180003687.01.T01:five_prime_UTR | 40.0% | |
| AGAAGGGCAGCTATTCTAAA+GGG | - | Chr1:66619717-66619736 | MsG0180003687.01.T01:five_prime_UTR | 40.0% | |
| AGATCGAAGAACATGCGAAA+TGG | + | Chr1:66617321-66617340 | None:intergenic | 40.0% | |
| CATGGTAAGTGATGTTCCAA+AGG | + | Chr1:66618069-66618088 | None:intergenic | 40.0% | |
| CATGTTCTTCGATCTTCGAT+CGG | - | Chr1:66617326-66617345 | MsG0180003687.01.T01:three_prime_UTR | 40.0% | |
| CGAAATGGATCTGAGAGTTA+TGG | + | Chr1:66617306-66617325 | None:intergenic | 40.0% | |
| CTTGAAAAAAGTGATAGGCG+TGG | - | Chr1:66617500-66617519 | MsG0180003687.01.T01:CDS | 40.0% | |
| GAACACAATTAACCACCCTT+TGG | - | Chr1:66618050-66618069 | MsG0180003687.01.T01:intron | 40.0% | |
| GTAGTTTATGTTTGGACGGT+GGG | - | Chr1:66618879-66618898 | MsG0180003687.01.T01:intron | 40.0% | |
| TATAGATGGCCAGAATCTTG+TGG | - | Chr1:66619770-66619789 | MsG0180003687.01.T01:five_prime_UTR | 40.0% | |
| TGGCCAATCAATGTATCTCT+TGG | - | Chr1:66620108-66620127 | MsG0180003687.01.T01:five_prime_UTR | 40.0% | |
| TGGGAAATCCTTTGTTCGAT+CGG | + | Chr1:66617354-66617373 | None:intergenic | 40.0% | |
| TGGGTTGCCGAAATCATTAT+GGG | - | Chr1:66618898-66618917 | MsG0180003687.01.T01:intron | 40.0% | |
| TGTAGTTTATGTTTGGACGG+TGG | - | Chr1:66618878-66618897 | MsG0180003687.01.T01:intron | 40.0% | |
| ! | ATGGCAGATACAAGTTTTGC+AGG | + | Chr1:66619530-66619549 | None:intergenic | 40.0% |
| ! | CTTTTCACTCTTCTTGATCC+GGG | + | Chr1:66619678-66619697 | None:intergenic | 40.0% |
| ! | GTATCTGATGATGATGAGGA+TGG | - | Chr1:66618587-66618606 | MsG0180003687.01.T01:CDS | 40.0% |
| AACTACTTTCCACCCCCATT+GGG | + | Chr1:66619369-66619388 | None:intergenic | 45.0% | |
| ACGGTATGTGACGACAATGT+TGG | + | Chr1:66619632-66619651 | None:intergenic | 45.0% | |
| ACGGTTGCTAGCCATGATTT+CGG | - | Chr1:66619021-66619040 | MsG0180003687.01.T01:intron | 45.0% | |
| CACCGTATCAGGATAAGGAA+AGG | + | Chr1:66618708-66618727 | None:intergenic | 45.0% | |
| CAGAAGGGCAGCTATTCTAA+AGG | - | Chr1:66619716-66619735 | MsG0180003687.01.T01:five_prime_UTR | 45.0% | |
| CTCTACACAACTTCCAGACT+CGG | - | Chr1:66618784-66618803 | MsG0180003687.01.T01:CDS | 45.0% | |
| GAAATCATTATGGGCAACCG+TGG | - | Chr1:66618907-66618926 | MsG0180003687.01.T01:intron | 45.0% | |
| GTAAGTGATGTTCCAAAGGG+TGG | + | Chr1:66618065-66618084 | None:intergenic | 45.0% | |
| TCATTCGGCAGATAGAAAGC+TGG | - | Chr1:66619102-66619121 | MsG0180003687.01.T01:intron | 45.0% | |
| TCGTCATCAGAAGAGCTTGA+AGG | + | Chr1:66618734-66618753 | None:intergenic | 45.0% | |
| TCTTCTTCACACAACCGAAC+AGG | + | Chr1:66620055-66620074 | None:intergenic | 45.0% | |
| ! | GGTACGCGAGCTTTATGATT+AGG | + | Chr1:66618336-66618355 | None:intergenic | 45.0% |
| ! | GTGGGTTGCCGAAATCATTA+TGG | - | Chr1:66618897-66618916 | MsG0180003687.01.T01:intron | 45.0% |
| ! | TTCAAGCTCTTCTGATGACG+AGG | - | Chr1:66618733-66618752 | MsG0180003687.01.T01:CDS | 45.0% |
| !! | CAAGCTCCTCACTTTTAGTG+TGG | + | Chr1:66618672-66618691 | None:intergenic | 45.0% |
| !! | CATATGTGGTGGGTTTGAAC+AGG | - | Chr1:66618640-66618659 | MsG0180003687.01.T01:CDS | 45.0% |
| ACCGAAAGTCCTTGCCATGT+CGG | - | Chr1:66619884-66619903 | MsG0180003687.01.T01:five_prime_UTR | 50.0% | |
| ACTACTTTCCACCCCCATTG+GGG | + | Chr1:66619368-66619387 | None:intergenic | 50.0% | |
| ACTCTCCTGCGAATGTTGTC+GGG | - | Chr1:66618489-66618508 | MsG0180003687.01.T01:intron | 50.0% | |
| ATAGAAAGCTGGTCGCTCCA+AGG | - | Chr1:66619113-66619132 | MsG0180003687.01.T01:intron | 50.0% | |
| ATAGAAGCTGGTCACCCCAA+TGG | - | Chr1:66619351-66619370 | MsG0180003687.01.T01:intron | 50.0% | |
| ATAGCTTCTCCGACATGGCA+AGG | + | Chr1:66619896-66619915 | None:intergenic | 50.0% | |
| ATTGGGGAGGGACACATATG+TGG | - | Chr1:66618626-66618645 | MsG0180003687.01.T01:CDS | 50.0% | |
| CAACTACTTTCCACCCCCAT+TGG | + | Chr1:66619370-66619389 | None:intergenic | 50.0% | |
| CAATGGGGGTGGAAAGTAGT+TGG | - | Chr1:66619368-66619387 | MsG0180003687.01.T01:intron | 50.0% | |
| CACCGGATCATACACATCAG+GGG | + | Chr1:66619609-66619628 | None:intergenic | 50.0% | |
| CACTCTCCTGCGAATGTTGT+CGG | - | Chr1:66618488-66618507 | MsG0180003687.01.T01:intron | 50.0% | |
| CTTGAAGGCAACACCGTATC+AGG | + | Chr1:66618719-66618738 | None:intergenic | 50.0% | |
| GCACCGGATCATACACATCA+GGG | + | Chr1:66619610-66619629 | None:intergenic | 50.0% | |
| GGCAACACCGTATCAGGATA+AGG | + | Chr1:66618713-66618732 | None:intergenic | 50.0% | |
| TAGAAAGCTGGTCGCTCCAA+GGG | - | Chr1:66619114-66619133 | MsG0180003687.01.T01:intron | 50.0% | |
| TAGAAGCTGGTCACCCCAAT+GGG | - | Chr1:66619352-66619371 | MsG0180003687.01.T01:intron | 50.0% | |
| TCCGACATGGCAAGGACTTT+CGG | + | Chr1:66619888-66619907 | None:intergenic | 50.0% | |
| TGCTCATAGCTTCTCCGACA+TGG | + | Chr1:66619901-66619920 | None:intergenic | 50.0% | |
| TGGCCAGAATCTTGTGGCAA+AGG | - | Chr1:66619776-66619795 | MsG0180003687.01.T01:five_prime_UTR | 50.0% | |
| TGTGACGACAATGTTGGCAC+CGG | + | Chr1:66619626-66619645 | None:intergenic | 50.0% | |
| ! | AAGCTCTTCTGATGACGAGG+AGG | - | Chr1:66618736-66618755 | MsG0180003687.01.T01:CDS | 50.0% |
| ! | ACAAGTTTTGCAGGTGCCTG+TGG | + | Chr1:66619521-66619540 | None:intergenic | 50.0% |
| ! | GATCGGTTCCGATCGAACAA+AGG | - | Chr1:66617343-66617362 | MsG0180003687.01.T01:exon | 50.0% |
| !! | TGGTGGGTTAGCCGAAATCA+TGG | + | Chr1:66619035-66619054 | None:intergenic | 50.0% |
| AGAAAGCTGGTCGCTCCAAG+GGG | - | Chr1:66619115-66619134 | MsG0180003687.01.T01:intron | 55.0% | |
| AGAAGCTGGTCACCCCAATG+GGG | - | Chr1:66619353-66619372 | MsG0180003687.01.T01:intron | 55.0% | |
| CAACTACTTTCCACCCCCCT+TGG | + | Chr1:66619133-66619152 | None:intergenic | 55.0% | |
| CAAGGGGGGTGGAAAGTAGT+TGG | - | Chr1:66619131-66619150 | MsG0180003687.01.T01:intron | 55.0% | |
| CGACAACATTCGCAGGAGAG+TGG | + | Chr1:66618490-66618509 | None:intergenic | 55.0% | |
| GCGATCCCAAGTGTTTCTCG+CGG | + | Chr1:66619562-66619581 | None:intergenic | 55.0% | |
| GGCCCCTGATGTGTATGATC+CGG | - | Chr1:66619604-66619623 | MsG0180003687.01.T01:five_prime_UTR | 55.0% | |
| GGGAGGGACACATATGTGGT+GGG | - | Chr1:66618630-66618649 | MsG0180003687.01.T01:CDS | 55.0% | |
| GGTAGCCGCGAGAAACACTT+GGG | - | Chr1:66619554-66619573 | MsG0180003687.01.T01:intron | 55.0% | |
| TGGCAAGGACTTTCGGTAGC+TGG | + | Chr1:66619881-66619900 | None:intergenic | 55.0% | |
| TTTCTCGCGGCTACCCTTCA+TGG | + | Chr1:66619549-66619568 | None:intergenic | 55.0% | |
| ! | GGCACCGGATCATACACATC+AGG | + | Chr1:66619611-66619630 | None:intergenic | 55.0% |
| ! | TCCAGACTCGGTTTCTCAGC+CGG | - | Chr1:66618796-66618815 | MsG0180003687.01.T01:CDS | 55.0% |
| ! | TCTGATGACGAGGAGGCTGA+TGG | - | Chr1:66618743-66618762 | MsG0180003687.01.T01:CDS | 55.0% |
| AAAGCTGGTCGCTCCAAGGG+GGG | - | Chr1:66619117-66619136 | MsG0180003687.01.T01:intron | 60.0% | |
| ACCGGCTGAGAAACCGAGTC+TGG | + | Chr1:66618800-66618819 | None:intergenic | 60.0% | |
| GAAAGCTGGTCGCTCCAAGG+GGG | - | Chr1:66619116-66619135 | MsG0180003687.01.T01:intron | 60.0% | |
| GAAGCTGGTCACCCCAATGG+GGG | - | Chr1:66619354-66619373 | MsG0180003687.01.T01:intron | 60.0% | |
| GGGGAGGGACACATATGTGG+TGG | - | Chr1:66618629-66618648 | MsG0180003687.01.T01:CDS | 60.0% | |
| GGGTAGCCGCGAGAAACACT+TGG | - | Chr1:66619553-66619572 | MsG0180003687.01.T01:intron | 60.0% | |
| TCGCACCCGACAACATTCGC+AGG | + | Chr1:66618497-66618516 | None:intergenic | 60.0% | |
| GCTGGTCACCCCAATGGGGG+TGG | - | Chr1:66619357-66619376 | MsG0180003687.01.T01:intron | 70.0% | |
| GCTGGTCGCTCCAAGGGGGG+TGG | - | Chr1:66619120-66619139 | MsG0180003687.01.T01:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 66617133 | 66620177 | 66617133 | ID=MsG0180003687.01;Name=MsG0180003687.01 |
| Chr1 | mRNA | 66617133 | 66620177 | 66617133 | ID=MsG0180003687.01.T01;Parent=MsG0180003687.01;Name=MsG0180003687.01.T01;_AED=0.49;_eAED=0.49;_QI=626|1|1|1|0.5|0.33|3|219|257 |
| Chr1 | exon | 66619570 | 66620177 | 66619570 | ID=MsG0180003687.01.T01:exon:3587;Parent=MsG0180003687.01.T01 |
| Chr1 | exon | 66618493 | 66618849 | 66618493 | ID=MsG0180003687.01.T01:exon:3588;Parent=MsG0180003687.01.T01 |
| Chr1 | exon | 66617133 | 66617786 | 66617133 | ID=MsG0180003687.01.T01:exon:3589;Parent=MsG0180003687.01.T01 |
| Chr1 | five_prime_UTR | 66619570 | 66620177 | 66619570 | ID=MsG0180003687.01.T01:five_prime_utr;Parent=MsG0180003687.01.T01 |
| Chr1 | five_prime_UTR | 66618832 | 66618849 | 66618832 | ID=MsG0180003687.01.T01:five_prime_utr;Parent=MsG0180003687.01.T01 |
| Chr1 | CDS | 66618493 | 66618831 | 66618493 | ID=MsG0180003687.01.T01:cds;Parent=MsG0180003687.01.T01 |
| Chr1 | CDS | 66617352 | 66617786 | 66617352 | ID=MsG0180003687.01.T01:cds;Parent=MsG0180003687.01.T01 |
| Chr1 | three_prime_UTR | 66617133 | 66617351 | 66617133 | ID=MsG0180003687.01.T01:three_prime_utr;Parent=MsG0180003687.01.T01 |
| Gene Sequence |
| Protein sequence |
