AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005847.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005847.01.T01 MTR_1g108340 97.073 410 11 1 1 410 1 409 0.0 812
MsG0180005847.01.T01 MTR_1g108340 97.073 410 11 1 1 410 1 409 0.0 811
MsG0180005847.01.T01 MTR_4g076900 36.415 357 202 5 72 409 7 357 1.49e-65 221
MsG0180005847.01.T01 MTR_4g076970 39.604 303 180 2 47 349 4 303 5.32e-65 220
MsG0180005847.01.T01 MTR_4g076940 36.544 353 199 5 76 409 35 381 1.39e-64 219
MsG0180005847.01.T01 MTR_4g076940 36.338 355 201 5 74 409 73 421 3.51e-64 219
MsG0180005847.01.T01 MTR_2g079980 37.107 318 181 6 94 404 31 336 4.18e-59 203
MsG0180005847.01.T01 MTR_7g106880 32.297 418 238 13 25 408 85 491 4.96e-59 205
MsG0180005847.01.T01 MTR_1g093990 33.924 395 216 12 46 405 25 409 7.57e-59 203
MsG0180005847.01.T01 MTR_7g106880 35.103 339 189 8 94 408 9 340 7.66e-59 202
MsG0180005847.01.T01 MTR_8g059150 34.435 363 218 7 51 404 21 372 9.36e-59 202
MsG0180005847.01.T01 MTR_1g054935 36.102 313 187 5 29 332 98 406 2.14e-57 201
MsG0180005847.01.T01 MTR_6g066240 35.211 355 204 7 74 410 47 393 5.96e-57 199
MsG0180005847.01.T01 MTR_1g054935 41.250 240 136 3 94 332 9 244 4.17e-56 194
MsG0180005847.01.T01 MTR_1g054960 40.833 240 138 3 94 332 23 259 2.41e-54 190
MsG0180005847.01.T01 MTR_4g094090 33.898 354 211 7 67 409 6 347 8.14e-54 189
MsG0180005847.01.T01 MTR_1g096580 40.000 255 148 3 79 332 75 325 1.76e-53 189
MsG0180005847.01.T01 MTR_5g025470 32.353 374 217 10 53 405 27 385 2.39e-53 188
MsG0180005847.01.T01 MTR_5g096390 39.552 268 156 3 66 332 81 343 6.80e-52 185
MsG0180005847.01.T01 MTR_4g093845 34.375 352 202 10 72 409 39 375 1.15e-51 184
MsG0180005847.01.T01 MTR_4g094010 33.149 362 212 8 67 409 21 371 1.37e-51 184
MsG0180005847.01.T01 MTR_4g094050 38.828 273 161 4 68 337 47 316 7.92e-51 182
MsG0180005847.01.T01 MTR_4g094060 38.462 273 162 4 68 337 47 316 1.89e-50 181
MsG0180005847.01.T01 MTR_8g107450 38.290 269 154 4 74 334 43 307 3.42e-49 179
MsG0180005847.01.T01 MTR_1g115790 38.189 254 151 3 82 333 110 359 3.78e-48 175
MsG0180005847.01.T01 MTR_4g076940 34.932 292 167 4 137 409 1 288 5.19e-47 170
MsG0180005847.01.T01 MTR_7g100120 37.705 244 146 3 92 333 125 364 3.05e-46 170
MsG0180005847.01.T01 MTR_8g093840 35.943 281 169 6 58 335 20 292 1.42e-44 164
MsG0180005847.01.T01 MTR_3g463680 29.703 404 242 12 42 415 780 1171 1.59e-44 166
MsG0180005847.01.T01 MTR_3g463680 32.117 274 150 7 94 334 168 438 8.23e-28 117
MsG0180005847.01.T01 MTR_1g094660 34.426 244 155 2 92 333 515 755 2.94e-43 162
MsG0180005847.01.T01 MTR_5g030910 37.698 252 149 5 94 343 51 296 3.70e-43 161
MsG0180005847.01.T01 MTR_1g094660 34.426 244 155 2 92 333 515 755 3.71e-43 162
MsG0180005847.01.T01 MTR_7g101780 36.466 266 158 5 71 333 495 752 4.97e-43 162
MsG0180005847.01.T01 MTR_7g098780 34.713 314 153 10 94 362 175 481 8.88e-43 161
MsG0180005847.01.T01 MTR_7g098780 34.940 249 151 5 94 334 845 1090 1.10e-37 146
MsG0180005847.01.T01 MTR_2g078080 38.866 247 138 6 92 333 48 286 1.87e-42 158
MsG0180005847.01.T01 MTR_8g014360 36.400 250 148 5 94 335 905 1151 2.18e-42 160
MsG0180005847.01.T01 MTR_8g014360 32.000 275 150 7 94 334 178 449 2.14e-33 133
MsG0180005847.01.T01 MTR_7g104100 28.802 434 239 14 16 398 775 1189 3.08e-42 159
MsG0180005847.01.T01 MTR_7g104100 33.451 284 148 8 87 334 175 453 1.05e-34 137
MsG0180005847.01.T01 MTR_8g014360 36.400 250 148 5 94 335 905 1151 3.09e-42 159
MsG0180005847.01.T01 MTR_8g014360 32.000 275 150 7 94 334 178 449 3.45e-33 133
MsG0180005847.01.T01 MTR_2g101090 32.515 326 192 8 94 403 871 1184 6.85e-42 158
MsG0180005847.01.T01 MTR_2g101090 29.304 273 140 8 94 334 179 430 4.88e-24 105
MsG0180005847.01.T01 MTR_1g063920 35.510 245 151 4 92 333 491 731 5.53e-41 155
MsG0180005847.01.T01 MTR_1g050525 30.447 358 210 10 71 403 864 1207 9.10e-41 155
MsG0180005847.01.T01 MTR_1g050525 34.286 280 147 6 89 334 171 447 9.79e-37 143
MsG0180005847.01.T01 MTR_4g011620 36.201 279 133 9 94 334 161 432 1.08e-40 155
MsG0180005847.01.T01 MTR_4g011620 33.117 308 185 8 45 334 797 1101 1.58e-39 151
MsG0180005847.01.T01 MTR_7g098760 34.173 278 140 7 94 334 162 433 1.91e-40 154
MsG0180005847.01.T01 MTR_7g098760 35.743 249 149 5 94 334 880 1125 4.02e-38 147
MsG0180005847.01.T01 MTR_7g098320 35.842 279 134 9 94 334 158 429 2.22e-40 154
MsG0180005847.01.T01 MTR_7g098320 34.940 249 151 4 94 334 875 1120 1.23e-36 143
MsG0180005847.01.T01 MTR_7g098320 35.842 279 134 9 94 334 158 429 2.34e-40 154
MsG0180005847.01.T01 MTR_7g098320 34.940 249 151 4 94 334 875 1120 1.42e-36 142
MsG0180005847.01.T01 MTR_7g098750 34.409 279 138 8 94 334 162 433 5.48e-40 153
MsG0180005847.01.T01 MTR_7g098750 33.096 281 169 6 94 358 883 1160 1.55e-37 145
MsG0180005847.01.T01 MTR_7g098750 34.409 279 138 8 94 334 162 433 5.82e-40 152
MsG0180005847.01.T01 MTR_7g098750 33.096 281 169 6 94 358 883 1160 1.83e-37 145
MsG0180005847.01.T01 MTR_7g098370 34.409 279 138 8 94 334 162 433 7.55e-40 152
MsG0180005847.01.T01 MTR_7g098370 32.740 281 170 5 94 358 841 1118 8.81e-37 143
MsG0180005847.01.T01 MTR_2g102660 35.842 279 134 9 94 334 167 438 1.80e-39 151
MsG0180005847.01.T01 MTR_2g102660 31.707 328 186 9 42 334 776 1100 5.25e-39 150
MsG0180005847.01.T01 MTR_4g011640 33.566 286 145 8 87 334 164 442 3.75e-39 150
MsG0180005847.01.T01 MTR_4g011640 35.743 249 149 5 94 334 863 1108 6.74e-37 144
MsG0180005847.01.T01 MTR_7g104110 32.459 305 185 7 48 334 819 1120 4.02e-39 150
MsG0180005847.01.T01 MTR_7g104110 34.420 276 142 7 94 334 178 449 4.74e-37 144
MsG0180005847.01.T01 MTR_7g104150 34.520 281 162 7 71 334 853 1128 4.81e-39 150
MsG0180005847.01.T01 MTR_7g104150 34.657 277 140 8 94 334 184 455 1.08e-35 140
MsG0180005847.01.T01 MTR_5g070320 30.841 321 189 7 44 334 499 816 5.05e-39 150
MsG0180005847.01.T01 MTR_5g070320 33.083 133 87 2 203 334 23 154 4.67e-18 87.4
MsG0180005847.01.T01 MTR_2g102670 31.498 327 186 9 43 334 760 1083 5.54e-39 150
MsG0180005847.01.T01 MTR_2g102670 34.050 279 121 11 94 334 167 420 7.94e-33 132
MsG0180005847.01.T01 MTR_5g070320 30.841 321 189 7 44 334 786 1103 5.95e-39 150
MsG0180005847.01.T01 MTR_5g070320 31.159 276 152 6 94 334 169 441 7.06e-32 129
MsG0180005847.01.T01 MTR_7g098300 31.804 327 176 9 47 335 117 434 6.67e-39 149
MsG0180005847.01.T01 MTR_7g098300 34.818 247 150 4 94 332 879 1122 1.96e-37 145
MsG0180005847.01.T01 MTR_5g070320 30.841 321 189 7 44 334 595 912 8.26e-39 149
MsG0180005847.01.T01 MTR_5g070320 29.245 212 116 4 156 334 40 250 2.65e-20 94.4
MsG0180005847.01.T01 MTR_1g492950 32.803 314 195 7 94 397 894 1201 1.14e-38 149
MsG0180005847.01.T01 MTR_1g492950 34.982 283 145 8 87 334 182 460 8.27e-37 143
MsG0180005847.01.T01 MTR_2g102640 36.145 249 148 5 94 334 858 1103 1.17e-38 149
MsG0180005847.01.T01 MTR_2g102640 34.767 279 137 8 94 334 167 438 1.53e-38 149
MsG0180005847.01.T01 MTR_4g011630 35.294 289 136 9 87 334 166 444 1.26e-38 149
MsG0180005847.01.T01 MTR_4g011630 35.743 249 149 5 94 334 866 1111 6.00e-38 147
MsG0180005847.01.T01 MTR_4g058000 36.327 245 149 4 92 333 505 745 2.02e-38 148
MsG0180005847.01.T01 MTR_3g107870 35.616 292 148 8 77 334 152 437 2.10e-38 148
MsG0180005847.01.T01 MTR_3g107870 33.217 286 164 8 55 327 841 1112 1.05e-36 143
MsG0180005847.01.T01 MTR_7g098800 34.940 249 151 5 94 334 803 1048 3.67e-38 147
MsG0180005847.01.T01 MTR_7g098800 32.975 279 144 7 94 335 133 405 1.56e-36 142
MsG0180005847.01.T01 MTR_7g098740 32.975 279 142 8 94 334 162 433 8.53e-38 146
MsG0180005847.01.T01 MTR_7g098740 34.902 255 143 6 94 334 841 1086 2.26e-37 145
MsG0180005847.01.T01 MTR_7g098750 33.096 281 169 6 94 358 613 890 1.34e-37 145
MsG0180005847.01.T01 MTR_7g098750 35.000 160 99 4 178 334 6 163 1.92e-24 106
MsG0180005847.01.T01 MTR_7g104130 38.710 217 123 4 94 305 883 1094 2.44e-37 145
MsG0180005847.01.T01 MTR_7g104130 34.783 276 141 8 94 334 184 455 2.86e-37 145
MsG0180005847.01.T01 MTR_7g104130 38.710 217 123 4 94 305 883 1094 2.73e-37 145
MsG0180005847.01.T01 MTR_7g104130 34.783 276 141 8 94 334 184 455 3.48e-37 144
MsG0180005847.01.T01 MTR_4g113070 34.902 255 143 6 94 334 844 1089 3.26e-37 144
MsG0180005847.01.T01 MTR_4g113070 33.121 314 153 12 94 361 150 452 2.10e-33 133
MsG0180005847.01.T01 MTR_4g123850 32.372 312 153 9 71 334 138 439 1.26e-36 143
MsG0180005847.01.T01 MTR_4g123850 30.405 296 185 7 57 334 811 1103 4.19e-32 129
MsG0180005847.01.T01 MTR_3g096410 37.037 243 141 6 91 328 55 290 2.09e-36 141
MsG0180005847.01.T01 MTR_1g011640 34.304 309 174 9 48 334 798 1099 4.64e-36 141
MsG0180005847.01.T01 MTR_1g011640 36.014 286 138 7 87 334 147 425 6.41e-34 135
MsG0180005847.01.T01 MTR_1g011650 35.857 251 146 6 94 334 877 1122 1.34e-35 140
MsG0180005847.01.T01 MTR_1g011650 36.014 286 138 9 87 334 159 437 9.49e-35 137
MsG0180005847.01.T01 MTR_2g095390 31.987 297 193 6 42 337 77 365 2.83e-35 138
MsG0180005847.01.T01 MTR_7g098890 30.573 314 201 8 94 397 784 1090 4.47e-34 135
MsG0180005847.01.T01 MTR_7g098890 30.980 255 160 7 94 335 136 387 5.95e-31 126
MsG0180005847.01.T01 MTR_1g099570 33.798 287 161 9 63 334 9 281 1.24e-33 133
MsG0180005847.01.T01 MTR_4g116540 32.959 267 155 6 94 347 75 330 2.18e-33 132
MsG0180005847.01.T01 MTR_4g054020 37.019 208 127 3 133 337 7 213 1.09e-32 130
MsG0180005847.01.T01 MTR_3g040670 33.471 242 138 6 114 343 201 431 4.66e-29 118
MsG0180005847.01.T01 MTR_8g103450 33.486 218 106 7 71 279 220 407 1.17e-24 105
MsG0180005847.01.T01 MTR_1g066650 60.759 79 27 1 66 144 25 99 1.21e-19 84.3
MsG0180005847.01.T01 MTR_6g012535 33.636 220 115 10 94 299 16 218 2.58e-17 80.9
MsG0180005847.01.T01 MTR_6g034270 30.000 240 145 8 88 326 449 666 2.25e-16 82.0
MsG0180005847.01.T01 MTR_0019s0020 29.075 227 139 7 78 303 572 777 2.96e-16 81.6
MsG0180005847.01.T01 MTR_0019s0020 29.075 227 139 7 78 303 572 777 3.24e-16 81.6
MsG0180005847.01.T01 MTR_0019s0020 29.075 227 139 7 78 303 572 777 3.34e-16 81.6
MsG0180005847.01.T01 MTR_0019s0020 29.075 227 139 7 78 303 572 777 4.06e-16 81.3
MsG0180005847.01.T01 MTR_0019s0020 29.075 227 139 7 78 303 572 777 5.14e-16 80.9
MsG0180005847.01.T01 MTR_0196s0020 29.524 210 126 7 95 303 639 827 6.25e-16 80.9
MsG0180005847.01.T01 MTR_4g089130 42.857 84 48 0 212 295 1 84 7.84e-16 73.2
MsG0180005847.01.T01 MTR_1567s0010 29.583 240 139 8 64 296 218 434 1.23e-15 79.0
MsG0180005847.01.T01 MTR_7g091350 46.250 80 43 0 220 299 81 160 1.71e-15 73.9
MsG0180005847.01.T01 MTR_6g034265 29.048 210 127 7 95 303 637 825 1.99e-15 79.3
MsG0180005847.01.T01 MTR_6g034220 28.708 209 127 7 95 302 638 825 1.17e-14 77.0
MsG0180005847.01.T01 MTR_6g034230 28.571 210 128 7 95 303 639 827 1.28e-14 76.6
MsG0180005847.01.T01 MTR_6g034310 27.801 241 140 9 76 303 236 455 1.55e-13 73.2
MsG0180005847.01.T01 MTR_6g034310 28.095 210 129 7 95 303 625 813 1.78e-13 73.2
MsG0180005847.01.T01 MTR_6g034310 28.095 210 129 7 95 303 625 813 1.90e-13 73.2
MsG0180005847.01.T01 MTR_4g109720 27.027 222 142 9 88 302 398 606 2.30e-13 72.4
MsG0180005847.01.T01 MTR_7g079540 27.039 233 133 7 94 302 100 319 3.31e-13 70.9
MsG0180005847.01.T01 MTR_6g034755 29.730 222 133 8 95 315 646 845 4.14e-13 72.0
MsG0180005847.01.T01 MTR_7g060570 30.144 209 126 5 61 267 901 1091 4.49e-13 71.6
MsG0180005847.01.T01 MTR_3g437870 28.959 221 128 8 92 302 635 836 9.82e-13 70.5
MsG0180005847.01.T01 MTR_3g086430 29.167 216 136 9 92 302 1016 1219 1.78e-12 70.1
MsG0180005847.01.T01 MTR_8g022270 25.600 250 166 9 58 302 1226 1460 3.62e-12 68.9
MsG0180005847.01.T01 MTR_4g108170 28.571 210 117 7 105 302 628 816 3.69e-12 68.9
MsG0180005847.01.T01 MTR_7g079540 28.947 190 109 5 94 269 100 277 6.36e-12 66.6
MsG0180005847.01.T01 MTR_6g009200 29.493 217 134 8 93 302 1036 1240 7.02e-12 68.2
MsG0180005847.01.T01 MTR_7g091380 21.864 279 204 5 50 327 1434 1699 1.72e-11 67.0
MsG0180005847.01.T01 MTR_4g128980 52.830 53 25 0 227 279 34 86 1.73e-11 62.0
MsG0180005847.01.T01 MTR_7g091380 21.864 279 204 5 50 327 1252 1517 1.92e-11 66.6
MsG0180005847.01.T01 MTR_7g091380 21.864 279 204 5 50 327 1434 1699 1.98e-11 66.6
MsG0180005847.01.T01 MTR_7g091380 21.864 279 204 5 50 327 1232 1497 2.02e-11 66.6
MsG0180005847.01.T01 MTR_6g009070 28.571 217 136 8 93 302 950 1154 3.04e-11 65.9
MsG0180005847.01.T01 MTR_6g034350 28.507 221 134 8 95 314 646 843 4.38e-11 65.5
MsG0180005847.01.T01 MTR_4g081190 27.234 235 155 9 88 318 1001 1223 4.56e-11 65.5
MsG0180005847.01.T01 MTR_4g108163 28.372 215 137 8 92 302 618 819 4.96e-11 65.1
MsG0180005847.01.T01 MTR_6g008800 28.821 229 135 9 93 305 1023 1239 5.76e-11 65.1
MsG0180005847.01.T01 MTR_6g034335 26.291 213 135 7 95 306 643 834 7.27e-11 65.1
MsG0180005847.01.T01 MTR_6g009110 28.571 217 136 8 93 302 1034 1238 9.67e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 597
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 597
MsG0180005847.01.T01 AT2G01320 76.330 376 85 1 35 410 35 406 0.0 597
MsG0180005847.01.T01 AT2G01320 76.330 376 85 1 35 410 35 406 0.0 597
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 596
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 596
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 596
MsG0180005847.01.T01 AT2G01320 73.902 410 103 1 1 410 1 406 0.0 596
MsG0180005847.01.T01 AT3G21090 36.261 353 200 4 76 409 27 373 5.39e-66 223
MsG0180005847.01.T01 AT3G25620 33.915 401 223 13 37 405 30 420 1.35e-63 212
MsG0180005847.01.T01 AT1G51500 34.133 375 221 6 56 409 5 374 1.55e-63 216
MsG0180005847.01.T01 AT3G25620 33.915 401 223 13 37 405 30 420 2.61e-62 213
MsG0180005847.01.T01 AT1G51460 36.413 368 195 7 74 410 10 369 2.11e-59 205
MsG0180005847.01.T01 AT5G06530 33.810 420 225 12 37 410 110 522 2.57e-58 202
MsG0180005847.01.T01 AT5G06530 33.810 420 225 12 37 410 110 522 3.67e-58 203
MsG0180005847.01.T01 AT5G06530 33.810 420 225 12 37 410 110 522 3.67e-58 203
MsG0180005847.01.T01 AT4G27420 35.127 353 209 8 71 408 34 381 5.56e-58 201
MsG0180005847.01.T01 AT1G31770 34.758 351 206 7 71 405 50 393 4.81e-57 198
MsG0180005847.01.T01 AT1G17840 40.602 266 150 4 74 337 50 309 1.64e-55 195
MsG0180005847.01.T01 AT3G55100 37.075 294 163 7 52 333 5 288 4.41e-53 188
MsG0180005847.01.T01 AT3G55100 37.075 294 163 7 52 333 5 288 4.41e-53 188
MsG0180005847.01.T01 AT5G06530 37.421 318 168 8 111 404 1 311 7.43e-52 181
MsG0180005847.01.T01 AT1G71960 35.061 328 200 7 85 404 74 396 1.97e-51 183
MsG0180005847.01.T01 AT3G13220 36.335 322 187 7 92 401 104 419 2.28e-50 181
MsG0180005847.01.T01 AT2G37360 37.407 270 160 5 75 339 112 377 2.71e-48 176
MsG0180005847.01.T01 AT3G55110 35.461 282 167 4 63 333 52 329 3.03e-48 175
MsG0180005847.01.T01 AT3G55090 35.197 304 176 5 46 333 46 344 6.28e-47 172
MsG0180005847.01.T01 AT3G53510 38.934 244 143 3 92 333 124 363 1.08e-46 171
MsG0180005847.01.T01 AT3G55130 36.364 275 162 4 68 333 67 337 1.81e-46 170
MsG0180005847.01.T01 AT2G39350 38.843 242 142 3 94 333 109 346 6.22e-46 169
MsG0180005847.01.T01 AT1G53390 38.272 243 143 4 94 333 523 761 1.15e-45 169
MsG0180005847.01.T01 AT2G37010 36.327 245 149 4 92 333 498 738 2.90e-44 165
MsG0180005847.01.T01 AT2G37010 36.327 245 149 4 92 333 498 738 2.90e-44 165
MsG0180005847.01.T01 AT4G15230 35.238 315 176 10 66 358 796 1104 3.85e-44 165
MsG0180005847.01.T01 AT4G15230 34.437 302 156 11 71 334 130 427 2.76e-38 148
MsG0180005847.01.T01 AT4G15230 35.238 315 176 10 66 358 717 1025 4.35e-44 165
MsG0180005847.01.T01 AT4G15230 34.437 302 156 11 71 334 51 348 3.42e-38 147
MsG0180005847.01.T01 AT4G15230 35.238 315 176 10 66 358 796 1104 4.87e-44 165
MsG0180005847.01.T01 AT4G15230 34.437 302 156 11 71 334 130 427 3.90e-38 147
MsG0180005847.01.T01 AT4G15230 35.238 315 176 10 66 358 796 1104 4.87e-44 165
MsG0180005847.01.T01 AT4G15230 34.437 302 156 11 71 334 130 427 3.90e-38 147
MsG0180005847.01.T01 AT1G59870 31.667 360 205 11 70 403 863 1207 1.69e-43 163
MsG0180005847.01.T01 AT1G59870 35.636 275 140 7 94 334 186 457 1.49e-38 149
MsG0180005847.01.T01 AT3G16340 31.117 376 218 11 47 398 786 1144 2.75e-43 162
MsG0180005847.01.T01 AT3G16340 31.900 279 140 8 94 334 162 428 1.28e-34 137
MsG0180005847.01.T01 AT3G16340 31.117 376 218 11 47 398 791 1149 3.02e-43 162
MsG0180005847.01.T01 AT3G16340 31.900 279 145 7 94 334 162 433 2.40e-36 142
MsG0180005847.01.T01 AT5G13580 37.903 248 148 3 88 333 102 345 1.85e-42 159
MsG0180005847.01.T01 AT2G13610 37.795 254 147 6 83 333 51 296 2.04e-42 158
MsG0180005847.01.T01 AT1G15210 30.025 393 231 13 43 403 800 1180 3.28e-42 159
MsG0180005847.01.T01 AT1G15210 35.636 275 140 7 94 334 184 455 2.43e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 793 1067 5.20e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 104 424 2.47e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 790 1064 5.55e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 101 421 2.87e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 790 1064 5.55e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 101 421 2.87e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 790 1064 5.55e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 101 421 2.87e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 790 1064 5.55e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 101 421 2.87e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 790 1064 5.55e-42 159
MsG0180005847.01.T01 AT4G15215 32.416 327 178 10 45 334 101 421 2.87e-37 145
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 786 1060 6.45e-42 159
MsG0180005847.01.T01 AT4G15215 33.333 327 168 11 45 334 104 417 8.13e-37 144
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 783 1057 7.29e-42 158
MsG0180005847.01.T01 AT4G15215 33.333 327 168 11 45 334 101 414 9.09e-37 143
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 783 1057 7.29e-42 158
MsG0180005847.01.T01 AT4G15215 33.333 327 168 11 45 334 101 414 9.09e-37 143
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 783 1057 7.29e-42 158
MsG0180005847.01.T01 AT4G15215 33.333 327 168 11 45 334 101 414 9.09e-37 143
MsG0180005847.01.T01 AT4G15215 35.689 283 158 8 66 332 783 1057 7.29e-42 158
MsG0180005847.01.T01 AT4G15215 33.333 327 168 11 45 334 101 414 9.09e-37 143
MsG0180005847.01.T01 AT4G15236 34.926 272 165 6 71 334 795 1062 2.30e-41 157
MsG0180005847.01.T01 AT4G15236 33.007 306 155 9 71 334 127 424 9.29e-36 140
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 797 1064 5.42e-41 155
MsG0180005847.01.T01 AT4G15233 32.450 302 162 9 71 334 129 426 1.44e-35 140
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 788 1055 5.57e-41 155
MsG0180005847.01.T01 AT4G15233 32.450 302 153 10 71 334 129 417 1.64e-31 128
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 779 1046 6.00e-41 155
MsG0180005847.01.T01 AT4G15233 34.028 288 158 9 71 334 129 408 2.94e-37 145
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 797 1064 6.31e-41 155
MsG0180005847.01.T01 AT4G15233 32.450 302 162 9 71 334 129 426 1.86e-35 139
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 735 1002 6.90e-41 155
MsG0180005847.01.T01 AT4G15233 32.450 302 162 9 71 334 67 364 1.73e-35 139
MsG0180005847.01.T01 AT4G15233 34.799 273 164 7 71 334 735 1002 6.90e-41 155
MsG0180005847.01.T01 AT4G15233 32.450 302 162 9 71 334 67 364 1.73e-35 139
MsG0180005847.01.T01 AT3G53480 29.659 381 223 12 54 411 830 1188 2.80e-40 154
MsG0180005847.01.T01 AT3G53480 33.227 313 155 10 67 334 157 460 6.54e-38 147
MsG0180005847.01.T01 AT1G53270 36.232 276 162 7 61 332 20 285 3.34e-40 151
MsG0180005847.01.T01 AT2G36380 31.268 355 218 10 64 398 839 1187 9.44e-40 152
MsG0180005847.01.T01 AT2G36380 33.818 275 145 6 94 334 188 459 4.23e-37 144
MsG0180005847.01.T01 AT2G37280 34.551 301 170 9 54 334 634 927 1.14e-39 152
MsG0180005847.01.T01 AT2G37280 34.457 267 130 8 106 334 8 267 4.53e-35 138
MsG0180005847.01.T01 AT2G37280 34.551 301 170 9 54 334 792 1085 1.29e-39 152
MsG0180005847.01.T01 AT2G37280 32.907 313 156 10 67 334 122 425 1.59e-38 149
MsG0180005847.01.T01 AT2G37280 34.551 301 170 9 54 334 792 1085 1.53e-39 151
MsG0180005847.01.T01 AT2G37280 32.907 313 156 10 67 334 122 425 1.87e-38 148
MsG0180005847.01.T01 AT2G37280 34.551 301 170 9 54 334 821 1114 1.54e-39 151
MsG0180005847.01.T01 AT2G37280 31.176 340 155 11 67 334 122 454 3.65e-35 139
MsG0180005847.01.T01 AT1G66950 30.997 371 215 12 54 398 833 1188 6.37e-39 150
MsG0180005847.01.T01 AT1G66950 34.545 275 143 6 94 334 190 461 1.50e-38 149
MsG0180005847.01.T01 AT2G29940 33.700 273 163 6 48 305 795 1064 6.83e-39 149
MsG0180005847.01.T01 AT2G29940 32.857 280 142 7 94 334 175 447 1.05e-33 134
MsG0180005847.01.T01 AT4G15233 36.546 249 145 6 95 334 677 921 1.03e-38 149
MsG0180005847.01.T01 AT4G15233 33.121 314 175 11 45 334 44 346 2.62e-37 145
MsG0180005847.01.T01 AT4G15233 36.546 249 145 6 95 334 677 921 1.03e-38 149
MsG0180005847.01.T01 AT4G15233 33.121 314 175 11 45 334 44 346 2.62e-37 145
MsG0180005847.01.T01 AT5G60740 35.510 245 151 4 92 333 513 753 3.02e-38 147
MsG0180005847.01.T01 AT2G26910 35.252 278 160 9 71 332 815 1088 3.07e-38 147
MsG0180005847.01.T01 AT2G26910 38.163 283 122 12 94 334 150 421 2.19e-36 142
MsG0180005847.01.T01 AT3G30842 35.510 245 145 5 71 305 818 1059 1.04e-37 146
MsG0180005847.01.T01 AT3G30842 31.655 278 147 7 94 334 161 432 1.94e-31 127
MsG0180005847.01.T01 AT5G19410 35.102 245 152 5 94 333 75 317 1.27e-37 144
MsG0180005847.01.T01 AT5G19410 35.102 245 152 5 94 333 66 308 1.29e-37 144
MsG0180005847.01.T01 AT1G15520 33.333 279 141 9 94 334 169 440 2.43e-36 142
MsG0180005847.01.T01 AT1G15520 35.743 249 145 6 94 332 852 1095 2.62e-36 142
MsG0180005847.01.T01 AT1G15520 33.333 279 141 9 94 334 169 440 2.74e-36 142
MsG0180005847.01.T01 AT1G15520 35.743 249 145 6 94 332 852 1095 2.76e-36 142
MsG0180005847.01.T01 AT5G52860 35.714 280 157 9 63 333 8 273 7.57e-35 136
MsG0180005847.01.T01 AT4G25750 35.918 245 140 7 93 333 29 260 1.32e-33 132
MsG0180005847.01.T01 AT2G28070 31.734 271 178 5 68 337 108 372 3.81e-33 132
MsG0180005847.01.T01 AT2G28070 31.734 271 178 5 68 337 108 372 3.81e-33 132
MsG0180005847.01.T01 AT3G28380 31.535 241 133 10 94 318 1012 1236 9.11e-16 80.1
MsG0180005847.01.T01 AT3G28390 30.734 218 130 8 93 302 996 1200 1.50e-15 79.7
MsG0180005847.01.T01 AT3G47790 28.390 236 140 7 77 302 589 805 5.50e-15 77.8
MsG0180005847.01.T01 AT3G28345 30.415 217 132 7 93 302 1011 1215 9.14e-15 77.0
MsG0180005847.01.T01 AT5G61700 30.636 173 113 3 105 277 626 791 2.37e-14 75.5
MsG0180005847.01.T01 AT5G61700 30.636 173 113 3 105 277 626 791 2.37e-14 75.5
MsG0180005847.01.T01 AT3G47790 29.187 209 121 6 77 275 470 661 4.92e-14 74.7
MsG0180005847.01.T01 AT3G47790 29.187 209 121 6 77 275 589 780 4.94e-14 74.7
MsG0180005847.01.T01 AT3G28360 29.536 237 133 9 94 313 998 1217 6.37e-14 74.7
MsG0180005847.01.T01 AT1G27940 32.110 218 123 9 94 302 807 1008 7.67e-14 74.3
MsG0180005847.01.T01 AT1G27940 26.117 291 191 10 16 302 105 375 4.31e-12 68.6
MsG0180005847.01.T01 AT1G27940 32.110 218 123 9 94 302 1021 1222 1.10e-13 73.9
MsG0180005847.01.T01 AT1G27940 28.037 214 139 7 93 302 387 589 5.66e-12 68.6
MsG0180005847.01.T01 AT5G39040 27.928 222 140 8 88 302 407 615 1.72e-13 72.8
MsG0180005847.01.T01 AT5G61740 28.910 211 141 5 92 302 605 806 2.18e-13 72.8
MsG0180005847.01.T01 AT5G61740 28.910 211 141 5 92 302 571 772 2.43e-13 72.4
MsG0180005847.01.T01 AT5G61740 28.910 211 141 5 92 302 466 667 3.10e-13 72.0
MsG0180005847.01.T01 AT1G28010 32.710 214 127 8 94 302 1023 1224 3.59e-13 72.0
MsG0180005847.01.T01 AT1G28010 27.876 226 148 7 81 302 376 590 1.47e-12 70.1
MsG0180005847.01.T01 AT5G61700 29.293 198 131 5 105 302 626 814 5.54e-13 71.6
MsG0180005847.01.T01 AT3G28415 29.032 217 135 7 93 302 1000 1204 9.78e-13 70.9
MsG0180005847.01.T01 AT3G28415 29.032 217 135 7 93 302 992 1196 1.09e-12 70.9
MsG0180005847.01.T01 AT4G28620 29.435 248 142 9 68 302 428 655 2.98e-12 68.9
MsG0180005847.01.T01 AT4G28630 27.574 272 155 11 44 302 411 653 3.75e-12 68.6
MsG0180005847.01.T01 AT5G58270 28.226 248 153 7 65 303 465 696 6.79e-12 67.8
MsG0180005847.01.T01 AT3G47750 31.169 154 99 3 98 251 639 785 9.74e-12 67.4
MsG0180005847.01.T01 AT3G47780 28.571 217 134 7 92 302 631 832 1.10e-11 67.4
MsG0180005847.01.T01 AT3G47730 28.947 190 113 6 95 277 547 721 1.80e-11 66.6
MsG0180005847.01.T01 AT1G70610 31.081 222 123 9 94 302 472 676 1.94e-11 66.6
MsG0180005847.01.T01 AT1G65410 25.532 235 138 7 92 302 97 318 2.13e-11 65.5
MsG0180005847.01.T01 AT3G47760 28.054 221 130 8 92 302 592 793 2.55e-11 66.2
MsG0180005847.01.T01 AT3G47760 28.054 221 130 8 92 302 632 833 2.65e-11 66.2
MsG0180005847.01.T01 AT1G70610 31.982 222 121 10 94 302 291 495 2.68e-11 65.9
MsG0180005847.01.T01 AT3G47760 28.054 221 130 8 92 302 602 803 3.13e-11 65.9
MsG0180005847.01.T01 AT3G62150 27.778 234 149 8 74 302 403 621 3.74e-11 65.9
MsG0180005847.01.T01 AT3G62150 27.778 234 149 8 74 302 403 621 3.74e-11 65.9
MsG0180005847.01.T01 AT3G62150 27.778 234 149 8 74 302 403 621 3.74e-11 65.9
MsG0180005847.01.T01 AT3G47740 28.019 207 136 6 98 302 634 829 4.30e-11 65.5
MsG0180005847.01.T01 AT3G47770 32.278 158 92 5 98 251 634 780 9.37e-11 64.3

Find 99 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATACTTGTAAGCGTTTC+TGG 0.044002 1:-96840063 None:intergenic
GCTTCATTTGAGTGGTCTTT+TGG 0.245192 1:+96840019 MsG0180005847.01.T01:CDS
TTCAGGACTTGATGCCTTCC+AGG 0.251382 1:+96841624 MsG0180005847.01.T01:intron
TTGACGTACTTCTCAAAATT+CGG 0.256412 1:+96841808 MsG0180005847.01.T01:CDS
GAGAGGTCATCTAGAGTAAT+TGG 0.267154 1:-96842832 None:intergenic
GGGAAGATTATTAGCAATAA+TGG 0.301474 1:+96839929 MsG0180005847.01.T01:CDS
ACCCGGTCCCGCTCTCTTGC+CGG 0.307668 1:+96839518 MsG0180005847.01.T01:CDS
GGGGCTGGTGGAAGCAATTT+CGG 0.321572 1:+96842902 MsG0180005847.01.T01:CDS
GGCTTCGGCGGAAGCGGCCT+TGG 0.338514 1:+96839444 MsG0180005847.01.T01:CDS
CTCCGACAACTTGCACTTGA+TGG 0.340538 1:+96841667 MsG0180005847.01.T01:CDS
ATTATTGCTAATAATCTTCC+CGG 0.345391 1:-96839927 None:intergenic
TGTGACCGGAGTAACCTTTC+CGG 0.349870 1:-96839598 None:intergenic
CATCAAATCGTCACCGGCTT+CGG 0.358293 1:+96839429 MsG0180005847.01.T01:CDS
ATAATGGGACCTTCAGGTTC+AGG 0.359612 1:+96839945 MsG0180005847.01.T01:CDS
GTCAGAAGAACTGTAGTCTA+TGG 0.365223 1:-96842728 None:intergenic
CTTGTTTATGCTGGTCCTGC+TGG 0.368413 1:+96841775 MsG0180005847.01.T01:CDS
TTAGCAATAATGGGACCTTC+AGG 0.377039 1:+96839939 MsG0180005847.01.T01:CDS
TCTGCAGGATTAACATGATC+TGG 0.377991 1:-96842685 None:intergenic
ACATTGCTCAATGTTCTTGC+TGG 0.392961 1:+96839975 MsG0180005847.01.T01:CDS
TCTGAGTGGAGAAGCAAAAC+CGG 0.400838 1:+96839908 MsG0180005847.01.T01:CDS
TGACGTACTTCTCAAAATTC+GGG 0.406341 1:+96841809 MsG0180005847.01.T01:CDS
CTCCGGCAAGAGAGCGGGAC+CGG 0.406687 1:-96839520 None:intergenic
CGGCGACGGCGAGCTGGCCA+AGG 0.422879 1:-96839461 None:intergenic
ACTTCAGAAGGAAACGATAA+TGG 0.425848 1:+96839383 MsG0180005847.01.T01:exon
GGAAGATTATTAGCAATAAT+GGG 0.443325 1:+96839930 MsG0180005847.01.T01:CDS
ATGTGCATGCTTACCTGTTG+TGG 0.444270 1:-96840793 None:intergenic
TCTTAGACGGGCATGGATGC+AGG 0.446165 1:+96842930 MsG0180005847.01.T01:CDS
TTGTAAGCGTTTCTGGAACT+AGG 0.460457 1:-96840056 None:intergenic
ATTTCGGTTGCTTCTTAGAC+GGG 0.462980 1:+96842918 MsG0180005847.01.T01:CDS
CGGCGACGGCGACGGCGAGC+TGG 0.463697 1:-96839467 None:intergenic
CTTCCAGGCTGAGAAGGTTA+TGG 0.471980 1:+96841639 MsG0180005847.01.T01:CDS
GACCATCAAGTGCAAGTTGT+CGG 0.473333 1:-96841669 None:intergenic
AGAAAAGAAACGTTTATCCT+TGG 0.475014 1:+96840725 MsG0180005847.01.T01:CDS
AACAATTAATATTGTTCCAA+CGG 0.475181 1:-96839623 None:intergenic
TGTGCATGCTTACCTGTTGT+GGG 0.477043 1:-96840792 None:intergenic
GAAAGAGACGGCGACGGCGA+CGG 0.478264 1:-96839475 None:intergenic
AAGGCCGCTTCCGCCGAAGC+CGG 0.483433 1:-96839442 None:intergenic
GGAATAGAAACTCACGGACT+TGG 0.483703 1:-96839664 None:intergenic
TAGGTTTGCTTATGTGAGAC+AGG 0.484656 1:+96840179 MsG0180005847.01.T01:intron
TTTCCATAACCTTCTCAGCC+TGG 0.491728 1:-96841642 None:intergenic
GTCACCGGCTTCGGCGGAAG+CGG 0.492207 1:+96839438 MsG0180005847.01.T01:CDS
TCGTTCTCCGGCAAGAGAGC+GGG 0.492454 1:-96839525 None:intergenic
GGTTGCTTCTTAGACGGGCA+TGG 0.494016 1:+96842923 MsG0180005847.01.T01:CDS
CTTCTCACAGCTTACTGTGC+GGG 0.503628 1:+96840212 MsG0180005847.01.T01:CDS
TTGTTCCAACGGATTGTGAC+CGG 0.509628 1:-96839612 None:intergenic
TCATCGTCATCGTCGTTCTC+CGG 0.510258 1:-96839537 None:intergenic
GTTCGTATCTTCTCTGCACC+CGG 0.510405 1:+96839501 MsG0180005847.01.T01:CDS
TTTGCTGATGAACCCACAAC+AGG 0.513694 1:+96840780 MsG0180005847.01.T01:CDS
GATGGTTCACTTGTTTATGC+TGG 0.515564 1:+96841766 MsG0180005847.01.T01:CDS
ATAGAAACTCACGGACTTGG+AGG 0.517644 1:-96839661 None:intergenic
AATTTCGGTTGCTTCTTAGA+CGG 0.519140 1:+96842917 MsG0180005847.01.T01:CDS
TAATGGGACCTTCAGGTTCA+GGG 0.520677 1:+96839946 MsG0180005847.01.T01:CDS
TTGCTGTACACTGATCCTCT+TGG 0.524353 1:-96841718 None:intergenic
GACATATTCATCCCTCTCCT+CGG 0.533970 1:-96840283 None:intergenic
CATATCTTCTTCCGAGGAGA+GGG 0.538336 1:+96840272 MsG0180005847.01.T01:CDS
CTGAGTGGAGAAGCAAAACC+GGG 0.541350 1:+96839909 MsG0180005847.01.T01:CDS
GACATTGTCTTGCTAACTGA+TGG 0.542803 1:+96841748 MsG0180005847.01.T01:CDS
TCATCAGCAAATATAACAGA+TGG 0.545628 1:-96840768 None:intergenic
TGATGCCTTCCAGGCTGAGA+AGG 0.546117 1:+96841633 MsG0180005847.01.T01:CDS
CAAATCGTCACCGGCTTCGG+CGG 0.546407 1:+96839432 MsG0180005847.01.T01:CDS
TCCGGCAAGAGAGCGGGACC+GGG 0.548217 1:-96839519 None:intergenic
GTTGGTGATGCAAAAGTTCG+TGG 0.550805 1:+96840690 MsG0180005847.01.T01:CDS
TGCAAGCAGTTCACATGCCA+AGG 0.551391 1:-96840742 None:intergenic
CGAACAGAGAAATGAGAATG+AGG 0.552494 1:-96839319 None:intergenic
AAAATAGAAAGAGAATCAGC+AGG 0.553358 1:+96842857 MsG0180005847.01.T01:CDS
CTGCAGGATTAACATGATCT+GGG 0.562652 1:-96842684 None:intergenic
AGCTGTGCTGATACTAATGT+TGG 0.562982 1:+96840672 MsG0180005847.01.T01:CDS
GTCGTTCTCCGGCAAGAGAG+CGG 0.569549 1:-96839526 None:intergenic
GGAGTAACCTTTCCGGTGGA+AGG 0.572446 1:-96839591 None:intergenic
AACTCCTCCTTCCACCGGAA+AGG 0.575600 1:+96839584 MsG0180005847.01.T01:CDS
TCACCTCGGCTTCATTTGAG+TGG 0.576603 1:+96840011 MsG0180005847.01.T01:CDS
GTAGTCTATGGATATAAGAT+CGG 0.582458 1:-96842716 None:intergenic
AAGGTTCATCAAATCGTCAC+CGG 0.587573 1:+96839423 MsG0180005847.01.T01:CDS
GATTAACATGATCTGGGCAG+TGG 0.587613 1:-96842678 None:intergenic
GTTGTCTTCCCTGAACCTGA+AGG 0.588343 1:-96839954 None:intergenic
ACATATCTTCTTCCGAGGAG+AGG 0.594361 1:+96840271 MsG0180005847.01.T01:CDS
CATAACCTTCTCAGCCTGGA+AGG 0.596713 1:-96841638 None:intergenic
GTCAATGGTTCATCACCAGC+AGG 0.597243 1:-96841790 None:intergenic
CATCAGCAAATATAACAGAT+GGG 0.610028 1:-96840767 None:intergenic
TTCCACCGGAAAGGTTACTC+CGG 0.612488 1:+96839593 MsG0180005847.01.T01:CDS
AACAAGGAAAGAGACGGCGA+CGG 0.621777 1:-96839481 None:intergenic
GGTGAAACTCCTCCTTCCAC+CGG 0.621820 1:+96839579 MsG0180005847.01.T01:CDS
TTACTCCGGTCACAATCCGT+TGG 0.623541 1:+96839607 MsG0180005847.01.T01:CDS
GACCGGAGTAACCTTTCCGG+TGG 0.623944 1:-96839595 None:intergenic
AAAGTTCGTGGAATCAGTGG+TGG 0.625280 1:+96840702 MsG0180005847.01.T01:CDS
GTAACCTTTCCGGTGGAAGG+AGG 0.627456 1:-96839588 None:intergenic
GTCACTTCAGAAACTTCAGA+AGG 0.629918 1:+96839371 MsG0180005847.01.T01:five_prime_UTR
GTCAGCTATCAGCGTCACCT+CGG 0.631548 1:+96839997 MsG0180005847.01.T01:CDS
TCAGAAGGAAACGATAATGG+TGG 0.639560 1:+96839386 MsG0180005847.01.T01:exon
TCACAACATATCTTCTTCCG+AGG 0.641806 1:+96840266 MsG0180005847.01.T01:CDS
TCTTCTCACAGCTTACTGTG+CGG 0.642529 1:+96840211 MsG0180005847.01.T01:CDS
GATACGAACAAGGAAAGAGA+CGG 0.644978 1:-96839487 None:intergenic
AGACCACTCAAATGAAGCCG+AGG 0.647618 1:-96840014 None:intergenic
TGCTCTATACATCAGCCAAG+AGG 0.652876 1:+96841703 MsG0180005847.01.T01:CDS
GCAAAAGTTCGTGGAATCAG+TGG 0.656069 1:+96840699 MsG0180005847.01.T01:CDS
ATAGAAAGAGAATCAGCAGG+AGG 0.685093 1:+96842860 MsG0180005847.01.T01:CDS
GTTTGCTTATGTGAGACAGG+AGG 0.685622 1:+96840182 MsG0180005847.01.T01:CDS
GTGCAGAGAAGATACGAACA+AGG 0.694888 1:-96839497 None:intergenic
GACGATGCTTCAATCAACGA+CGG 0.704093 1:+96839558 MsG0180005847.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCATTGTATTAACTT+GGG + Chr1:96839754-96839773 MsG0180005847.01.T01:intron 15.0%
!! AATAGTATATGAAGTTAATT+GGG - Chr1:96841923-96841942 None:intergenic 15.0%
!! CATATATTATTACAGTATAT+AGG - Chr1:96841420-96841439 None:intergenic 15.0%
!! TAATAGTATATGAAGTTAAT+TGG - Chr1:96841924-96841943 None:intergenic 15.0%
!! TCAACTTATTATAAAGAAAT+CGG - Chr1:96841967-96841986 None:intergenic 15.0%
!!! TTGATAATTTTTTATGAAAC+AGG + Chr1:96842653-96842672 MsG0180005847.01.T01:intron 15.0%
!! AAAAATCATCAAAAGAAGAA+AGG - Chr1:96841457-96841476 None:intergenic 20.0%
!! AACAATTAATATTGTTCCAA+CGG - Chr1:96839626-96839645 None:intergenic 20.0%
!! AATAAAAGAAAACAAGAGTT+TGG - Chr1:96841486-96841505 None:intergenic 20.0%
!! AGTTAGTTAATTTAGACATT+TGG - Chr1:96841145-96841164 None:intergenic 20.0%
!! CAAAAATCATTGTATTAACT+TGG + Chr1:96839753-96839772 MsG0180005847.01.T01:intron 20.0%
!! CAAACTTTGATTATGATATA+GGG + Chr1:96840839-96840858 MsG0180005847.01.T01:intron 20.0%
!! TAAAATCTTACTAGAAGTAA+GGG + Chr1:96842559-96842578 MsG0180005847.01.T01:intron 20.0%
!! TCAAACTTTGATTATGATAT+AGG + Chr1:96840838-96840857 MsG0180005847.01.T01:intron 20.0%
!! TTAAAATCTTACTAGAAGTA+AGG + Chr1:96842558-96842577 MsG0180005847.01.T01:intron 20.0%
!!! AATTTTGATTTTGTTGATGA+TGG + Chr1:96839843-96839862 MsG0180005847.01.T01:intron 20.0%
!!! AGATTTGATTTGAAATGAAT+AGG + Chr1:96839866-96839885 MsG0180005847.01.T01:intron 20.0%
!!! ATTTTGTTTAACATTTGTCA+TGG + Chr1:96842601-96842620 MsG0180005847.01.T01:intron 20.0%
!!! GATTTTAACAATAAAAAGCA+TGG - Chr1:96842546-96842565 None:intergenic 20.0%
!!! TCGATAGTAATTTTCATTTT+TGG - Chr1:96840530-96840549 None:intergenic 20.0%
!!! TTTTGAGTTTTAAATTGCTA+GGG - Chr1:96841209-96841228 None:intergenic 20.0%
! AACTTCATGACAAAATTAGT+GGG - Chr1:96841601-96841620 None:intergenic 25.0%
! AATCTTCAAGAAAGATATAC+AGG - Chr1:96840412-96840431 None:intergenic 25.0%
! ATTATTGCTAATAATCTTCC+CGG - Chr1:96839930-96839949 None:intergenic 25.0%
! ATTCCCAAATTAAGAATGTA+AGG - Chr1:96841866-96841885 None:intergenic 25.0%
! CTTCTATAATCTAGATTTCT+TGG - Chr1:96842052-96842071 None:intergenic 25.0%
! GGAAGATTATTAGCAATAAT+GGG + Chr1:96839930-96839949 MsG0180005847.01.T01:CDS 25.0%
! GTAAACCTTAGATATTGATA+AGG - Chr1:96842218-96842237 None:intergenic 25.0%
! TAACTTCATGACAAAATTAG+TGG - Chr1:96841602-96841621 None:intergenic 25.0%
! TCAATAAGAAATTCATCTTG+TGG + Chr1:96840881-96840900 MsG0180005847.01.T01:intron 25.0%
! TCTTGAAGATTGATGAATTT+CGG + Chr1:96840421-96840440 MsG0180005847.01.T01:intron 25.0%
! TTCAATCATGAATCTGATAT+AGG - Chr1:96840581-96840600 None:intergenic 25.0%
!! ATTTAGACATTTGGAATAGT+TGG - Chr1:96841136-96841155 None:intergenic 25.0%
!! TATATTTCTAACTTTCTGTG+AGG + Chr1:96842309-96842328 MsG0180005847.01.T01:intron 25.0%
!! TTGGAGTACTTAAGAAATTA+TGG + Chr1:96841897-96841916 MsG0180005847.01.T01:intron 25.0%
!! TTTTTGCTTAAAAATCTGAG+TGG + Chr1:96839894-96839913 MsG0180005847.01.T01:CDS 25.0%
!!! AGAAGCATTCCAAAAATTTA+GGG - Chr1:96841178-96841197 None:intergenic 25.0%
!!! CTAGATTGTTTTTACACATT+AGG + Chr1:96840928-96840947 MsG0180005847.01.T01:intron 25.0%
!!! CTGTTTTAGCTTTTATTTGA+GGG + Chr1:96842400-96842419 MsG0180005847.01.T01:intron 25.0%
!!! CTTTTGAGTTTTAAATTGCT+AGG - Chr1:96841210-96841229 None:intergenic 25.0%
!!! TCATATTGATTCCTTACAAA+GGG + Chr1:96841255-96841274 MsG0180005847.01.T01:intron 25.0%
!!! TCTGTTTTAGCTTTTATTTG+AGG + Chr1:96842399-96842418 MsG0180005847.01.T01:intron 25.0%
!!! TGTTTTAGCTTTTATTTGAG+GGG + Chr1:96842401-96842420 MsG0180005847.01.T01:intron 25.0%
!!! TTCATATTGATTCCTTACAA+AGG + Chr1:96841254-96841273 MsG0180005847.01.T01:intron 25.0%
AAAATAGAAAGAGAATCAGC+AGG + Chr1:96842857-96842876 MsG0180005847.01.T01:CDS 30.0%
AAGAATATCGTTTACCACAA+TGG - Chr1:96842146-96842165 None:intergenic 30.0%
ACAAGAGTTTGATCATTCAA+AGG - Chr1:96841073-96841092 None:intergenic 30.0%
ACTGAAAATGAACAGAATGA+AGG + Chr1:96840997-96841016 MsG0180005847.01.T01:intron 30.0%
ACTTCATGACAAAATTAGTG+GGG - Chr1:96841600-96841619 None:intergenic 30.0%
AGAAAAGAAACGTTTATCCT+TGG + Chr1:96840725-96840744 MsG0180005847.01.T01:CDS 30.0%
AGTCTCCTTATCAATATCTA+AGG + Chr1:96842210-96842229 MsG0180005847.01.T01:intron 30.0%
ATTGTGGTAAACGATATTCT+TGG + Chr1:96842145-96842164 MsG0180005847.01.T01:intron 30.0%
CAGAAATTAAATGCAGAACA+TGG - Chr1:96842348-96842367 None:intergenic 30.0%
CATCAGCAAATATAACAGAT+GGG - Chr1:96840770-96840789 None:intergenic 30.0%
CATGCTAATAGAGTAAAGAA+AGG + Chr1:96840957-96840976 MsG0180005847.01.T01:intron 30.0%
CCTCTCAAAAAAGAATCAAT+GGG + Chr1:96842761-96842780 MsG0180005847.01.T01:CDS 30.0%
CTGAAAATGAACAGAATGAA+GGG + Chr1:96840998-96841017 MsG0180005847.01.T01:intron 30.0%
CTGCCTTACATTCTTAATTT+GGG + Chr1:96841860-96841879 MsG0180005847.01.T01:intron 30.0%
GAGAAAGAAATCATGTGTTT+GGG - Chr1:96842524-96842543 None:intergenic 30.0%
GGGAAGATTATTAGCAATAA+TGG + Chr1:96839929-96839948 MsG0180005847.01.T01:CDS 30.0%
GTAGTCTATGGATATAAGAT+CGG - Chr1:96842719-96842738 None:intergenic 30.0%
GTTGTGAAAAAAAGAACCAT+TGG - Chr1:96841034-96841053 None:intergenic 30.0%
TAAGGGATAGTACATTGAAA+TGG + Chr1:96842576-96842595 MsG0180005847.01.T01:intron 30.0%
TCATCAGCAAATATAACAGA+TGG - Chr1:96840771-96840790 None:intergenic 30.0%
TCCTCTCAAAAAAGAATCAA+TGG + Chr1:96842760-96842779 MsG0180005847.01.T01:CDS 30.0%
TCTTTACTCTATTAGCATGT+GGG - Chr1:96840956-96840975 None:intergenic 30.0%
TGAAAATGAACAGAATGAAG+GGG + Chr1:96840999-96841018 MsG0180005847.01.T01:intron 30.0%
TTACCTACTACACAAGATAT+AGG - Chr1:96842378-96842397 None:intergenic 30.0%
TTCCAAAAATTTAGGGATCA+CGG - Chr1:96841171-96841190 None:intergenic 30.0%
TTCTTTACTCTATTAGCATG+TGG - Chr1:96840957-96840976 None:intergenic 30.0%
TTGAAGATCGATTGAATTGT+TGG + Chr1:96840149-96840168 MsG0180005847.01.T01:intron 30.0%
TTGACGTACTTCTCAAAATT+CGG + Chr1:96841808-96841827 MsG0180005847.01.T01:CDS 30.0%
! AACAATCTCCTTTTCAAAAC+AGG + Chr1:96840306-96840325 MsG0180005847.01.T01:CDS 30.0%
! CTTATCATTCCATCAAGTTT+TGG + Chr1:96842104-96842123 MsG0180005847.01.T01:intron 30.0%
! GAAGAGCATAATCTCAAAAT+TGG + Chr1:96842280-96842299 MsG0180005847.01.T01:intron 30.0%
! TGACATTGATAATACCATTG+TGG + Chr1:96842129-96842148 MsG0180005847.01.T01:intron 30.0%
! TGATTTGAAATGAATAGGTG+AGG + Chr1:96839871-96839890 MsG0180005847.01.T01:intron 30.0%
! TGTTAATCCTGCAGAATTTT+TGG + Chr1:96842693-96842712 MsG0180005847.01.T01:CDS 30.0%
! TGTTTTATGCCTTCCATATT+TGG + Chr1:96840478-96840497 MsG0180005847.01.T01:intron 30.0%
! TTTGTCATGAAGTTACTTTC+AGG + Chr1:96841607-96841626 MsG0180005847.01.T01:intron 30.0%
! TTTTTGTGTTGAATCGCAAT+GGG + Chr1:96841349-96841368 MsG0180005847.01.T01:intron 30.0%
!! AATTTTGAGAAGTACGTCAA+TGG - Chr1:96841808-96841827 None:intergenic 30.0%
!! GAGAAGCATTCCAAAAATTT+AGG - Chr1:96841179-96841198 None:intergenic 30.0%
!! TTGAATTGTTGGTTTGATGT+AGG + Chr1:96840160-96840179 MsG0180005847.01.T01:intron 30.0%
!!! ATTTTTGGAACTTGAGAGAA+AGG - Chr1:96840515-96840534 None:intergenic 30.0%
!!! GTTTTAGCTTTTATTTGAGG+GGG + Chr1:96842402-96842421 MsG0180005847.01.T01:intron 30.0%
!!! TTCTCTTTCTATTTTTCGAG+AGG - Chr1:96842852-96842871 None:intergenic 30.0%
!!! TTTTTTGTGTTGAATCGCAA+TGG + Chr1:96841348-96841367 MsG0180005847.01.T01:intron 30.0%
AAGGCAGCAAAACGTAAATA+AGG - Chr1:96841847-96841866 None:intergenic 35.0%
AATGTCAAGCCAAAACTTGA+TGG - Chr1:96842116-96842135 None:intergenic 35.0%
AATTTCGGTTGCTTCTTAGA+CGG + Chr1:96842917-96842936 MsG0180005847.01.T01:CDS 35.0%
ACGATATAGAAAAACTCACC+AGG - Chr1:96840332-96840351 None:intergenic 35.0%
ACTTCAGAAGGAAACGATAA+TGG + Chr1:96839383-96839402 MsG0180005847.01.T01:exon 35.0%
AGAGAAGGAATAGAAACTCA+CGG - Chr1:96839673-96839692 None:intergenic 35.0%
ATGCCTATATCTTGTGTAGT+AGG + Chr1:96842372-96842391 MsG0180005847.01.T01:intron 35.0%
CAGTAGTCAATCATGATTGA+AGG - Chr1:96840448-96840467 None:intergenic 35.0%
CATATACTTGTAAGCGTTTC+TGG - Chr1:96840066-96840085 None:intergenic 35.0%
CTTCATGACAAAATTAGTGG+GGG - Chr1:96841599-96841618 None:intergenic 35.0%
GCTGCCTTACATTCTTAATT+TGG + Chr1:96841859-96841878 MsG0180005847.01.T01:intron 35.0%
GGAGAAAGAAATCATGTGTT+TGG - Chr1:96842525-96842544 None:intergenic 35.0%
GTTACTTATCTTACTCCCTT+TGG + Chr1:96840630-96840649 MsG0180005847.01.T01:intron 35.0%
GTTGATTGAACAAATGCAGA+AGG - Chr1:96842502-96842521 None:intergenic 35.0%
TAAGTACTCCAACATTTGAG+AGG - Chr1:96841889-96841908 None:intergenic 35.0%
TAGTGTAAAATCAACCCCTT+GGG - Chr1:96841295-96841314 None:intergenic 35.0%
TCGTACACCACATAAAATTG+TGG - Chr1:96842255-96842274 None:intergenic 35.0%
TGACGTACTTCTCAAAATTC+GGG + Chr1:96841809-96841828 MsG0180005847.01.T01:CDS 35.0%
TTAGTGTAAAATCAACCCCT+TGG - Chr1:96841296-96841315 None:intergenic 35.0%
TTCATGACAAAATTAGTGGG+GGG - Chr1:96841598-96841617 None:intergenic 35.0%
TTTCTAACACTGACCTATAC+TGG + Chr1:96841374-96841393 MsG0180005847.01.T01:intron 35.0%
! ACAATTTTATGTGGTGTACG+AGG + Chr1:96842254-96842273 MsG0180005847.01.T01:intron 35.0%
! AGTCAAGCCACAATTTTATG+TGG + Chr1:96842245-96842264 MsG0180005847.01.T01:intron 35.0%
! CAATTTTATGTGGTGTACGA+GGG + Chr1:96842255-96842274 MsG0180005847.01.T01:intron 35.0%
!! AGTATATAGGTTGATGCACA+AGG - Chr1:96841407-96841426 None:intergenic 35.0%
!! CAATATGAAGTGTCGTAAGT+TGG - Chr1:96841243-96841262 None:intergenic 35.0%
!! CTAGATTTCTTGGCTTTTCA+AGG - Chr1:96842042-96842061 None:intergenic 35.0%
!! GAAACGATAATGGTGGTTTT+TGG + Chr1:96839393-96839412 MsG0180005847.01.T01:exon 35.0%
!! TGCACCATTTGATTTGTTCA+GGG + Chr1:96841319-96841338 MsG0180005847.01.T01:intron 35.0%
!! TTGCACCATTTGATTTGTTC+AGG + Chr1:96841318-96841337 MsG0180005847.01.T01:intron 35.0%
!!! CCCATTGATTCTTTTTTGAG+AGG - Chr1:96842764-96842783 None:intergenic 35.0%
!!! CTGATTTTGGTTACTCTGAA+AGG + Chr1:96839704-96839723 MsG0180005847.01.T01:intron 35.0%
!!! CTTTCTGCAAATGCTGATTT+TGG + Chr1:96839691-96839710 MsG0180005847.01.T01:intron 35.0%
!!! GTAGTTGCTGGTTTTTAAGT+AGG + Chr1:96840373-96840392 MsG0180005847.01.T01:intron 35.0%
AAGGTTCATCAAATCGTCAC+CGG + Chr1:96839423-96839442 MsG0180005847.01.T01:CDS 40.0%
AATAGTTGGTTACTCAGAGG+GGG - Chr1:96841122-96841141 None:intergenic 40.0%
ACATTGCTCAATGTTCTTGC+TGG + Chr1:96839975-96839994 MsG0180005847.01.T01:CDS 40.0%
ACTGTAGCAAAAACGAAAGG+GGG + Chr1:96842883-96842902 MsG0180005847.01.T01:CDS 40.0%
AGCAAGCATCCAAATATGGA+AGG - Chr1:96840490-96840509 None:intergenic 40.0%
AGGACTGTAGCAAAAACGAA+AGG + Chr1:96842880-96842899 MsG0180005847.01.T01:CDS 40.0%
ATAGAAAGAGAATCAGCAGG+AGG + Chr1:96842860-96842879 MsG0180005847.01.T01:CDS 40.0%
ATTTCGGTTGCTTCTTAGAC+GGG + Chr1:96842918-96842937 MsG0180005847.01.T01:CDS 40.0%
CAAAAATTTAGGGATCACGG+AGG - Chr1:96841168-96841187 None:intergenic 40.0%
CGAACAGAGAAATGAGAATG+AGG - Chr1:96839322-96839341 None:intergenic 40.0%
CTGCAGGATTAACATGATCT+GGG - Chr1:96842687-96842706 None:intergenic 40.0%
GAAATCGGTCACAACGAAAT+AGG - Chr1:96841952-96841971 None:intergenic 40.0%
GAAGGGGAATATATCTCCAA+TGG + Chr1:96841015-96841034 MsG0180005847.01.T01:intron 40.0%
GAATAGTTGGTTACTCAGAG+GGG - Chr1:96841123-96841142 None:intergenic 40.0%
GACATTGTCTTGCTAACTGA+TGG + Chr1:96841748-96841767 MsG0180005847.01.T01:CDS 40.0%
GACTCCCTGAACAAATCAAA+TGG - Chr1:96841326-96841345 None:intergenic 40.0%
GACTGTAGCAAAAACGAAAG+GGG + Chr1:96842882-96842901 MsG0180005847.01.T01:CDS 40.0%
GATACGAACAAGGAAAGAGA+CGG - Chr1:96839490-96839509 None:intergenic 40.0%
GATGGTTCACTTGTTTATGC+TGG + Chr1:96841766-96841785 MsG0180005847.01.T01:CDS 40.0%
GCAGGAAAATACCCTTTGTA+AGG - Chr1:96841269-96841288 None:intergenic 40.0%
GGAATAGTTGGTTACTCAGA+GGG - Chr1:96841124-96841143 None:intergenic 40.0%
GGACTGTAGCAAAAACGAAA+GGG + Chr1:96842881-96842900 MsG0180005847.01.T01:CDS 40.0%
GTCACTTCAGAAACTTCAGA+AGG + Chr1:96839371-96839390 MsG0180005847.01.T01:five_prime_UTR 40.0%
GTCAGAAGAACTGTAGTCTA+TGG - Chr1:96842731-96842750 None:intergenic 40.0%
TAACACTGACCTATACTGGA+GGG + Chr1:96841378-96841397 MsG0180005847.01.T01:intron 40.0%
TCACAACATATCTTCTTCCG+AGG + Chr1:96840266-96840285 MsG0180005847.01.T01:CDS 40.0%
TCAGCATTTGCAGAAAGAGA+AGG - Chr1:96839688-96839707 None:intergenic 40.0%
TCTGCAGGATTAACATGATC+TGG - Chr1:96842688-96842707 None:intergenic 40.0%
TGGAATAGTTGGTTACTCAG+AGG - Chr1:96841125-96841144 None:intergenic 40.0%
TTAAGCACACAGATGCCAAA+GGG - Chr1:96840648-96840667 None:intergenic 40.0%
TTGGGAATCCTCTCAAATGT+TGG + Chr1:96841878-96841897 MsG0180005847.01.T01:intron 40.0%
! AGCTGTGCTGATACTAATGT+TGG + Chr1:96840672-96840691 MsG0180005847.01.T01:CDS 40.0%
! CACGTTGTTCTGTTACTTCA+TGG + Chr1:96839799-96839818 MsG0180005847.01.T01:intron 40.0%
! CTCCGTGATCCCTAAATTTT+TGG + Chr1:96841166-96841185 MsG0180005847.01.T01:intron 40.0%
! CTCTGAAAATTGACCACACA+TGG - Chr1:96841552-96841571 None:intergenic 40.0%
! GAGAGGTCATCTAGAGTAAT+TGG - Chr1:96842835-96842854 None:intergenic 40.0%
! GCTTCATTTGAGTGGTCTTT+TGG + Chr1:96840019-96840038 MsG0180005847.01.T01:CDS 40.0%
! GTATTTTCCTGCATACCCAA+GGG + Chr1:96841277-96841296 MsG0180005847.01.T01:intron 40.0%
! TAGGTTTGCTTATGTGAGAC+AGG + Chr1:96840179-96840198 MsG0180005847.01.T01:intron 40.0%
! TATTTTCCTGCATACCCAAG+GGG + Chr1:96841278-96841297 MsG0180005847.01.T01:intron 40.0%
! TCAGAAGGAAACGATAATGG+TGG + Chr1:96839386-96839405 MsG0180005847.01.T01:exon 40.0%
! TTAGCAATAATGGGACCTTC+AGG + Chr1:96839939-96839958 MsG0180005847.01.T01:CDS 40.0%
!! ACGATAATGGTGGTTTTTGG+CGG + Chr1:96839396-96839415 MsG0180005847.01.T01:exon 40.0%
!! TATGAAGTGTCGTAAGTTGG+AGG - Chr1:96841240-96841259 None:intergenic 40.0%
!! TTGTAAGCGTTTCTGGAACT+AGG - Chr1:96840059-96840078 None:intergenic 40.0%
!!! AGTGGTCTTTTGGAGTTCAA+TGG + Chr1:96840029-96840048 MsG0180005847.01.T01:CDS 40.0%
AAAGTTCGTGGAATCAGTGG+TGG + Chr1:96840702-96840721 MsG0180005847.01.T01:CDS 45.0%
AACACTGACCTATACTGGAG+GGG + Chr1:96841379-96841398 MsG0180005847.01.T01:intron 45.0%
ACATATCTTCTTCCGAGGAG+AGG + Chr1:96840271-96840290 MsG0180005847.01.T01:CDS 45.0%
AGATCGGCCAAAAATTCTGC+AGG - Chr1:96842703-96842722 None:intergenic 45.0%
ATAGAAACTCACGGACTTGG+AGG - Chr1:96839664-96839683 None:intergenic 45.0%
ATGTGCATGCTTACCTGTTG+TGG - Chr1:96840796-96840815 None:intergenic 45.0%
CATATCTTCTTCCGAGGAGA+GGG + Chr1:96840272-96840291 MsG0180005847.01.T01:CDS 45.0%
CATGCAGCATTGCTTTGCAT+TGG + Chr1:96840813-96840832 MsG0180005847.01.T01:intron 45.0%
CTAACACTGACCTATACTGG+AGG + Chr1:96841377-96841396 MsG0180005847.01.T01:intron 45.0%
CTTAAGCACACAGATGCCAA+AGG - Chr1:96840649-96840668 None:intergenic 45.0%
CTTTGGCATCTGTGTGCTTA+AGG + Chr1:96840647-96840666 MsG0180005847.01.T01:intron 45.0%
GACATATTCATCCCTCTCCT+CGG - Chr1:96840286-96840305 None:intergenic 45.0%
GACCATCAAGTGCAAGTTGT+CGG - Chr1:96841672-96841691 None:intergenic 45.0%
GACGATGCTTCAATCAACGA+CGG + Chr1:96839558-96839577 MsG0180005847.01.T01:CDS 45.0%
GATTAACATGATCTGGGCAG+TGG - Chr1:96842681-96842700 None:intergenic 45.0%
GCAAAAGTTCGTGGAATCAG+TGG + Chr1:96840699-96840718 MsG0180005847.01.T01:CDS 45.0%
GGAATAGAAACTCACGGACT+TGG - Chr1:96839667-96839686 None:intergenic 45.0%
GTGCAGAGAAGATACGAACA+AGG - Chr1:96839500-96839519 None:intergenic 45.0%
GTTTGCTTATGTGAGACAGG+AGG + Chr1:96840182-96840201 MsG0180005847.01.T01:CDS 45.0%
TCTGAGTGGAGAAGCAAAAC+CGG + Chr1:96839908-96839927 MsG0180005847.01.T01:CDS 45.0%
TCTTCTCACAGCTTACTGTG+CGG + Chr1:96840211-96840230 MsG0180005847.01.T01:CDS 45.0%
TGCTCTATACATCAGCCAAG+AGG + Chr1:96841703-96841722 MsG0180005847.01.T01:CDS 45.0%
TGTGCATGCTTACCTGTTGT+GGG - Chr1:96840795-96840814 None:intergenic 45.0%
TTCACAACTGAGCACTTGCA+TGG + Chr1:96841046-96841065 MsG0180005847.01.T01:intron 45.0%
TTCAGTCGCAAAGTAGTTGC+TGG + Chr1:96840361-96840380 MsG0180005847.01.T01:intron 45.0%
TTGCTGTACACTGATCCTCT+TGG - Chr1:96841721-96841740 None:intergenic 45.0%
TTTCCATAACCTTCTCAGCC+TGG - Chr1:96841645-96841664 None:intergenic 45.0%
TTTGCTGATGAACCCACAAC+AGG + Chr1:96840780-96840799 MsG0180005847.01.T01:CDS 45.0%
! ATAATGGGACCTTCAGGTTC+AGG + Chr1:96839945-96839964 MsG0180005847.01.T01:CDS 45.0%
! GGTATTTTCCTGCATACCCA+AGG + Chr1:96841276-96841295 MsG0180005847.01.T01:intron 45.0%
! TAATGGGACCTTCAGGTTCA+GGG + Chr1:96839946-96839965 MsG0180005847.01.T01:CDS 45.0%
! TCTCCTTTTCAAAACAGGCC+TGG + Chr1:96840311-96840330 MsG0180005847.01.T01:CDS 45.0%
!! GTTGGTGATGCAAAAGTTCG+TGG + Chr1:96840690-96840709 MsG0180005847.01.T01:CDS 45.0%
!! TTGTTCCAACGGATTGTGAC+CGG - Chr1:96839615-96839634 None:intergenic 45.0%
!!! CGATAATGGTGGTTTTTGGC+GGG + Chr1:96839397-96839416 MsG0180005847.01.T01:exon 45.0%
!!! TCACCAGGCCTGTTTTGAAA+AGG - Chr1:96840317-96840336 None:intergenic 45.0%
AACAAGGAAAGAGACGGCGA+CGG - Chr1:96839484-96839503 None:intergenic 50.0%
AATCAACCCCTTGGGTATGC+AGG - Chr1:96841287-96841306 None:intergenic 50.0%
ACAAGGAACCCCTCCAGTAT+AGG - Chr1:96841390-96841409 None:intergenic 50.0%
AGACCACTCAAATGAAGCCG+AGG - Chr1:96840017-96840036 None:intergenic 50.0%
CATAACCTTCTCAGCCTGGA+AGG - Chr1:96841641-96841660 None:intergenic 50.0%
CCACACATGGCAGCAGTAAA+CGG - Chr1:96841539-96841558 None:intergenic 50.0%
CTCCGACAACTTGCACTTGA+TGG + Chr1:96841667-96841686 MsG0180005847.01.T01:CDS 50.0%
CTGAGTGGAGAAGCAAAACC+GGG + Chr1:96839909-96839928 MsG0180005847.01.T01:CDS 50.0%
CTTCCAGGCTGAGAAGGTTA+TGG + Chr1:96841639-96841658 MsG0180005847.01.T01:CDS 50.0%
CTTCTCACAGCTTACTGTGC+GGG + Chr1:96840212-96840231 MsG0180005847.01.T01:CDS 50.0%
CTTGTTTATGCTGGTCCTGC+TGG + Chr1:96841775-96841794 MsG0180005847.01.T01:CDS 50.0%
GGCGAGCAAGCATCCAAATA+TGG - Chr1:96840494-96840513 None:intergenic 50.0%
GTCAATGGTTCATCACCAGC+AGG - Chr1:96841793-96841812 None:intergenic 50.0%
GTTCGTATCTTCTCTGCACC+CGG + Chr1:96839501-96839520 MsG0180005847.01.T01:CDS 50.0%
GTTGTCTTCCCTGAACCTGA+AGG - Chr1:96839957-96839976 None:intergenic 50.0%
TAGCAAAAACGAAAGGGGGC+TGG + Chr1:96842887-96842906 MsG0180005847.01.T01:CDS 50.0%
TCACCTCGGCTTCATTTGAG+TGG + Chr1:96840011-96840030 MsG0180005847.01.T01:CDS 50.0%
TCATCGTCATCGTCGTTCTC+CGG - Chr1:96839540-96839559 None:intergenic 50.0%
TGCAAGCAGTTCACATGCCA+AGG - Chr1:96840745-96840764 None:intergenic 50.0%
TGTGACCGGAGTAACCTTTC+CGG - Chr1:96839601-96839620 None:intergenic 50.0%
TTACTCCGGTCACAATCCGT+TGG + Chr1:96839607-96839626 MsG0180005847.01.T01:CDS 50.0%
TTCAGGACTTGATGCCTTCC+AGG + Chr1:96841624-96841643 MsG0180005847.01.T01:intron 50.0%
TTCCACCGGAAAGGTTACTC+CGG + Chr1:96839593-96839612 MsG0180005847.01.T01:CDS 50.0%
!! CATCAAATCGTCACCGGCTT+CGG + Chr1:96839429-96839448 MsG0180005847.01.T01:CDS 50.0%
!!! GGTGGTTTTTGGCGGGAAAA+AGG + Chr1:96839404-96839423 MsG0180005847.01.T01:CDS 50.0%
AACTCCTCCTTCCACCGGAA+AGG + Chr1:96839584-96839603 MsG0180005847.01.T01:CDS 55.0%
CAAAAACGAAAGGGGGCTGG+TGG + Chr1:96842890-96842909 MsG0180005847.01.T01:CDS 55.0%
CATGGCAGCAGTAAACGGCA+AGG - Chr1:96841534-96841553 None:intergenic 55.0%
CCGTTTACTGCTGCCATGTG+TGG + Chr1:96841536-96841555 MsG0180005847.01.T01:intron 55.0%
GGAGTAACCTTTCCGGTGGA+AGG - Chr1:96839594-96839613 None:intergenic 55.0%
GGTGAAACTCCTCCTTCCAC+CGG + Chr1:96839579-96839598 MsG0180005847.01.T01:CDS 55.0%
GGTTGCTTCTTAGACGGGCA+TGG + Chr1:96842923-96842942 MsG0180005847.01.T01:CDS 55.0%
GTAACCTTTCCGGTGGAAGG+AGG - Chr1:96839591-96839610 None:intergenic 55.0%
GTCAGCTATCAGCGTCACCT+CGG + Chr1:96839997-96840016 MsG0180005847.01.T01:CDS 55.0%
TCTTAGACGGGCATGGATGC+AGG + Chr1:96842930-96842949 MsG0180005847.01.T01:CDS 55.0%
TGATGCCTTCCAGGCTGAGA+AGG + Chr1:96841633-96841652 MsG0180005847.01.T01:CDS 55.0%
! GGGGCTGGTGGAAGCAATTT+CGG + Chr1:96842902-96842921 MsG0180005847.01.T01:CDS 55.0%
GACCGGAGTAACCTTTCCGG+TGG - Chr1:96839598-96839617 None:intergenic 60.0%
GTCGTTCTCCGGCAAGAGAG+CGG - Chr1:96839529-96839548 None:intergenic 60.0%
GTGGGGGGAGAGATAGAGAG+AGG - Chr1:96841583-96841602 None:intergenic 60.0%
TCGTTCTCCGGCAAGAGAGC+GGG - Chr1:96839528-96839547 None:intergenic 60.0%
!! CAAATCGTCACCGGCTTCGG+CGG + Chr1:96839432-96839451 MsG0180005847.01.T01:CDS 60.0%
GAAAGAGACGGCGACGGCGA+CGG - Chr1:96839478-96839497 None:intergenic 65.0%
AAGGCCGCTTCCGCCGAAGC+CGG - Chr1:96839445-96839464 None:intergenic 70.0%
ACCCGGTCCCGCTCTCTTGC+CGG + Chr1:96839518-96839537 MsG0180005847.01.T01:CDS 70.0%
CTCCGGCAAGAGAGCGGGAC+CGG - Chr1:96839523-96839542 None:intergenic 70.0%
TCCGGCAAGAGAGCGGGACC+GGG - Chr1:96839522-96839541 None:intergenic 70.0%
!! GTCACCGGCTTCGGCGGAAG+CGG + Chr1:96839438-96839457 MsG0180005847.01.T01:CDS 70.0%
GGCTTCGGCGGAAGCGGCCT+TGG + Chr1:96839444-96839463 MsG0180005847.01.T01:CDS 75.0%
! CGGCGACGGCGAGCTGGCCA+AGG - Chr1:96839464-96839483 None:intergenic 80.0%
! CGGCGACGGCGACGGCGAGC+TGG - Chr1:96839470-96839489 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 96839313 96842987 96839313 ID=MsG0180005847.01;Name=MsG0180005847.01
Chr1 mRNA 96839313 96842987 96839313 ID=MsG0180005847.01.T01;Parent=MsG0180005847.01;Name=MsG0180005847.01.T01;_AED=0.45;_eAED=0.46;_QI=89|1|0.83|1|1|1|6|0|419
Chr1 exon 96839313 96839671 96839313 ID=MsG0180005847.01.T01:exon:10660;Parent=MsG0180005847.01.T01
Chr1 exon 96839888 96840078 96839888 ID=MsG0180005847.01.T01:exon:10661;Parent=MsG0180005847.01.T01
Chr1 exon 96840182 96840332 96840182 ID=MsG0180005847.01.T01:exon:10662;Parent=MsG0180005847.01.T01
Chr1 exon 96840669 96840801 96840669 ID=MsG0180005847.01.T01:exon:10663;Parent=MsG0180005847.01.T01
Chr1 exon 96841629 96841830 96841629 ID=MsG0180005847.01.T01:exon:10664;Parent=MsG0180005847.01.T01
Chr1 exon 96842675 96842987 96842675 ID=MsG0180005847.01.T01:exon:10665;Parent=MsG0180005847.01.T01
Chr1 five_prime_UTR 96839313 96839401 96839313 ID=MsG0180005847.01.T01:five_prime_utr;Parent=MsG0180005847.01.T01
Chr1 CDS 96839402 96839671 96839402 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Chr1 CDS 96839888 96840078 96839888 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Chr1 CDS 96840182 96840332 96840182 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Chr1 CDS 96840669 96840801 96840669 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Chr1 CDS 96841629 96841830 96841629 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Chr1 CDS 96842675 96842987 96842675 ID=MsG0180005847.01.T01:cds;Parent=MsG0180005847.01.T01
Gene Sequence

>MsG0180005847.01.T01

ATGGTGGTTTTTGGCGGGAAAAAGGTTCATCAAATCGTCACCGGCTTCGGCGGAAGCGGCCTTGGCCAGCTCGCCGTCGCCGTCGCCGTCTCTTTCCTTGTTCGTATCTTCTCTGCACCCGGTCCCGCTCTCTTGCCGGAGAACGACGATGACGATGACGATGCTTCAATCAACGACGGTGAAACTCCTCCTTCCACCGGAAAGGTTACTCCGGTCACAATCCGTTGGAACAATATTAATTGTTCACTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAAAATCTGAGTGGAGAAGCAAAACCGGGAAGATTATTAGCAATAATGGGACCTTCAGGTTCAGGGAAGACAACATTGCTCAATGTTCTTGCTGGTCAGCTATCAGCGTCACCTCGGCTTCATTTGAGTGGTCTTTTGGAGTTCAATGGAAAGCCTAGTTCCAGAAACGCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTCTTCTCACAGCTTACTGTGCGGGAAACATTGTCTCTTGCTATAGAATTACAGCTTCACAACATATCTTCTTCCGAGGAGAGGGATGAATATGTCAACAATCTCCTTTTCAAAACAGGCCTGGTCAGCTGTGCTGATACTAATGTTGGTGATGCAAAAGTTCGTGGAATCAGTGGTGGAGAAAAGAAACGTTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAGGTTATGGAAACTCTCCGACAACTTGCACTTGATGGTCATACTGTAATATGCTCTATACATCAGCCAAGAGGATCAGTGTACAGCAAATTCGACGACATTGTCTTGCTAACTGATGGTTCACTTGTTTATGCTGGTCCTGCTGGTGATGAACCATTGACGTACTTCTCAAAATTCGGGTACCACTGCCCAGATCATGTTAATCCTGCAGAATTTTTGGCCGATCTTATATCCATAGACTACAGTTCTTCTGACAGTGTCTATTCCTCTCAAAAAAGAATCAATGGGCTTGTTGAGTCATTCTCATTAAGACGATCTACAATAATATATGCTACTCCAATTACTCTAGATGACCTCTCGAAAAATAGAAAGAGAATCAGCAGGAGGACTGTAGCAAAAACGAAAGGGGGCTGGTGGAAGCAATTTCGGTTGCTTCTTAGACGGGCATGGATGCAGGTTTCTTTTTCAATTCATTGTCTTTCTACTTATTGA

Protein sequence

>MsG0180005847.01.T01

MVVFGGKKVHQIVTGFGGSGLGQLAVAVAVSFLVRIFSAPGPALLPENDDDDDDASINDGETPPSTGKVTPVTIRWNNINCSLSDKSSKSVRFLLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRNAYKFAYVRQEDLFFSQLTVRETLSLAIELQLHNISSSEERDEYVNNLLFKTGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHTVICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFLADLISIDYSSSDSVYSSQKRINGLVESFSLRRSTIIYATPITLDDLSKNRKRISRRTVAKTKGGWWKQFRLLLRRAWMQVSFSIHCLSTY*