AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007434.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007434.01.T01 MTR_2g025420 89.634 328 34 0 20 347 97 424 0.0 608
MsG0280007434.01.T01 MTR_2g426060 69.725 327 89 4 22 347 92 409 9.94e-157 446
MsG0280007434.01.T01 MTR_2g024100 70.497 322 89 4 21 340 88 405 4.34e-148 424
MsG0280007434.01.T01 MTR_0667s0010 64.955 331 109 5 19 347 84 409 1.53e-143 412
MsG0280007434.01.T01 MTR_2g426070 67.398 319 88 6 19 335 94 398 3.76e-141 406
MsG0280007434.01.T01 MTR_2g426020 66.134 313 93 5 25 335 96 397 6.65e-140 403
MsG0280007434.01.T01 MTR_2g425980 64.263 319 105 3 22 339 91 401 3.36e-137 396
MsG0280007434.01.T01 MTR_2g426090 63.363 333 102 6 22 347 93 412 6.90e-137 395
MsG0280007434.01.T01 MTR_2g028130 63.222 329 111 6 8 333 85 406 2.39e-136 394
MsG0280007434.01.T01 MTR_2g028140 61.934 331 113 5 20 347 98 418 2.85e-135 391
MsG0280007434.01.T01 MTR_2g025960 62.975 316 103 6 25 335 1 307 8.28e-133 381
MsG0280007434.01.T01 MTR_3g083010 63.467 323 106 7 19 335 98 414 9.11e-133 385
MsG0280007434.01.T01 MTR_2g028160 61.631 331 113 8 22 347 99 420 3.12e-126 369
MsG0280007434.01.T01 MTR_8g099460 60.060 333 115 4 20 347 84 403 4.08e-123 360
MsG0280007434.01.T01 MTR_4g070550 58.735 332 115 7 19 347 91 403 6.11e-121 354
MsG0280007434.01.T01 MTR_2g028110 59.177 316 107 6 20 333 81 376 1.98e-120 352
MsG0280007434.01.T01 MTR_1g068835 59.451 328 103 9 21 347 83 381 2.63e-116 342
MsG0280007434.01.T01 MTR_2g031720 55.522 335 119 8 20 347 85 396 2.99e-116 342
MsG0280007434.01.T01 MTR_2g031680 57.317 328 118 6 21 347 83 389 2.51e-114 337
MsG0280007434.01.T01 MTR_2g021050 58.075 322 93 6 24 335 90 379 1.04e-113 335
MsG0280007434.01.T01 MTR_2g031640 56.369 314 113 8 25 335 88 380 4.05e-108 321
MsG0280007434.01.T01 MTR_1g068875 56.667 330 106 9 22 347 84 380 1.24e-106 317
MsG0280007434.01.T01 MTR_2g026010 53.412 337 119 9 25 347 86 398 5.29e-100 301
MsG0280007434.01.T01 MTR_2g024110 51.495 301 120 7 27 322 91 370 1.28e-97 294
MsG0280007434.01.T01 MTR_1g068860 55.161 310 113 7 25 333 87 371 9.71e-96 289
MsG0280007434.01.T01 MTR_4g006270 41.009 317 134 9 27 327 87 366 1.21e-63 207
MsG0280007434.01.T01 MTR_4g133170 39.521 334 164 9 25 347 86 392 2.40e-63 206
MsG0280007434.01.T01 MTR_2g037520 66.452 155 44 2 147 300 1 148 1.41e-60 192
MsG0280007434.01.T01 MTR_2g040050 40.164 244 100 7 25 262 38 241 3.53e-50 168
MsG0280007434.01.T01 MTR_2g031700 51.235 162 66 2 23 184 85 233 1.52e-47 162
MsG0280007434.01.T01 MTR_2g031700 40.000 150 62 6 216 339 146 293 3.02e-15 75.5
MsG0280007434.01.T01 MTR_1g068905 39.423 312 100 11 22 333 84 306 1.81e-46 160
MsG0280007434.01.T01 MTR_2g025440 61.719 128 48 1 207 333 3 130 5.56e-43 149
MsG0280007434.01.T01 MTR_5g083940 35.593 295 120 11 25 314 64 293 1.85e-37 137
MsG0280007434.01.T01 MTR_3g086960 50.000 160 55 6 170 319 9 153 3.98e-35 125
MsG0280007434.01.T01 MTR_7g110360 55.652 115 48 2 207 318 206 320 1.83e-31 121
MsG0280007434.01.T01 MTR_7g110360 46.237 93 37 3 19 107 119 202 2.85e-11 64.3
MsG0280007434.01.T01 MTR_2g021150 30.847 295 161 11 27 316 113 369 1.04e-27 112
MsG0280007434.01.T01 MTR_7g110370 62.963 81 30 0 194 274 20 100 5.65e-27 106
MsG0280007434.01.T01 MTR_3g009300 27.986 293 176 10 27 318 97 355 7.33e-25 103
MsG0280007434.01.T01 MTR_7g407070 28.814 236 142 7 16 245 122 337 2.54e-23 100
MsG0280007434.01.T01 MTR_3g014570 29.010 293 171 9 27 316 121 379 5.35e-23 99.0
MsG0280007434.01.T01 MTR_3g024130 26.577 222 131 5 27 245 58 250 5.18e-22 95.1
MsG0280007434.01.T01 MTR_3g009260 29.310 290 169 13 28 316 131 385 1.10e-21 95.1
MsG0280007434.01.T01 MTR_3g006670 30.180 222 123 7 27 245 144 336 1.19e-21 95.5
MsG0280007434.01.T01 MTR_1g097560 27.148 291 166 13 27 316 129 374 1.50e-21 94.7
MsG0280007434.01.T01 MTR_2g046900 29.000 300 170 12 27 318 123 387 3.84e-21 93.6
MsG0280007434.01.T01 MTR_3g009310 28.525 305 174 15 16 316 127 391 1.59e-20 92.0
MsG0280007434.01.T01 MTR_3g013770 30.830 253 134 14 27 272 132 350 4.86e-20 90.5
MsG0280007434.01.T01 MTR_3g010390 27.948 229 128 7 27 245 134 335 8.43e-20 90.1
MsG0280007434.01.T01 MTR_3g007430 28.889 225 132 8 25 246 130 329 1.26e-19 89.4
MsG0280007434.01.T01 MTR_3g436150 29.279 222 130 7 28 245 133 331 1.60e-19 89.4
MsG0280007434.01.T01 MTR_2g021190 30.396 227 122 11 22 243 111 306 1.78e-19 89.0
MsG0280007434.01.T01 MTR_3g014540 31.696 224 119 11 27 245 121 315 4.47e-19 87.8
MsG0280007434.01.T01 MTR_2g046920 28.094 299 166 13 27 318 119 375 4.47e-19 87.8
MsG0280007434.01.T01 MTR_4g028510 26.433 314 197 11 20 318 111 405 8.27e-19 87.4
MsG0280007434.01.T01 MTR_3g007360 27.437 277 165 11 27 298 143 388 9.16e-19 87.0
MsG0280007434.01.T01 MTR_3g036290 28.239 301 162 13 21 318 110 359 1.17e-18 86.3
MsG0280007434.01.T01 MTR_3g007270 28.311 219 132 7 27 245 150 343 1.44e-18 86.7
MsG0280007434.01.T01 MTR_3g011100 27.692 325 186 12 8 317 313 603 1.60e-18 87.0
MsG0280007434.01.T01 MTR_1g097330 28.727 275 158 10 27 298 107 346 1.66e-18 86.3
MsG0280007434.01.T01 MTR_6g027890 28.939 311 180 15 24 316 38 325 1.96e-18 85.1
MsG0280007434.01.T01 MTR_3g009240 28.475 295 167 15 28 316 127 383 2.36e-18 85.5
MsG0280007434.01.T01 MTR_6g065980 28.378 222 115 12 28 247 109 288 3.20e-18 85.1
MsG0280007434.01.T01 MTR_2g029990 28.311 219 125 10 27 243 148 336 5.12e-18 84.7
MsG0280007434.01.T01 MTR_3g007410 27.076 277 166 11 27 298 143 388 5.74e-18 84.7
MsG0280007434.01.T01 MTR_2g046830 29.643 280 151 13 27 300 120 359 8.19e-18 84.3
MsG0280007434.01.T01 MTR_2g047832 27.010 311 166 12 27 315 124 395 1.02e-17 84.0
MsG0280007434.01.T01 MTR_6g080680 27.599 279 163 13 29 297 121 370 1.40e-17 83.6
MsG0280007434.01.T01 MTR_5g046280 26.119 268 161 13 53 316 20 254 1.48e-17 81.6
MsG0280007434.01.T01 MTR_2g046860 30.279 251 145 10 27 273 7 231 1.74e-17 82.4
MsG0280007434.01.T01 MTR_7g007300 27.119 295 159 13 27 316 203 446 2.02e-17 83.2
MsG0280007434.01.T01 MTR_5g046300 25.940 266 164 13 53 316 117 351 2.16e-17 82.4
MsG0280007434.01.T01 MTR_5g046290 25.940 266 164 13 53 316 117 351 2.16e-17 82.4
MsG0280007434.01.T01 MTR_4g130330 29.787 235 132 11 29 245 106 325 3.33e-17 82.4
MsG0280007434.01.T01 MTR_4g006350 28.060 335 179 16 27 333 595 895 3.38e-17 83.2
MsG0280007434.01.T01 MTR_4g028750 28.926 242 138 10 29 254 120 343 3.73e-17 82.4
MsG0280007434.01.T01 MTR_3g024040 29.010 293 169 14 27 318 121 375 4.69e-17 81.6
MsG0280007434.01.T01 MTR_1g094210 27.483 302 157 14 27 318 152 401 1.13e-16 80.9
MsG0280007434.01.T01 MTR_4g055060 28.136 295 179 9 27 318 125 389 1.15e-16 80.9
MsG0280007434.01.T01 MTR_4g061340 25.714 245 134 8 15 245 105 315 1.19e-16 80.5
MsG0280007434.01.T01 MTR_6g021880 26.821 302 171 14 27 316 119 382 1.53e-16 80.5
MsG0280007434.01.T01 MTR_2g028120 56.962 79 25 3 259 335 7 78 1.78e-16 73.9
MsG0280007434.01.T01 MTR_4g102410 26.804 291 150 14 30 294 169 422 2.05e-16 80.5
MsG0280007434.01.T01 MTR_3g006570 27.239 268 167 10 53 316 134 377 2.12e-16 79.7
MsG0280007434.01.T01 MTR_3g036335 27.586 290 164 16 28 316 141 385 2.70e-16 79.7
MsG0280007434.01.T01 MTR_3g013740 27.090 299 171 13 27 316 147 407 3.83e-16 79.3
MsG0280007434.01.T01 MTR_5g096630 25.714 315 182 16 30 321 126 411 5.92e-16 79.0
MsG0280007434.01.T01 MTR_1004s0010 26.531 294 161 14 30 318 119 362 6.35e-16 78.2
MsG0280007434.01.T01 MTR_8g054320 31.963 219 108 10 31 245 56 237 6.55e-16 77.8
MsG0280007434.01.T01 MTR_0760s0010 26.733 303 164 15 24 318 140 392 6.88e-16 78.6
MsG0280007434.01.T01 MTR_4g030830 26.603 312 174 13 29 315 112 393 8.34e-16 78.2
MsG0280007434.01.T01 MTR_4g028680 26.073 303 183 14 29 313 120 399 1.26e-15 77.8
MsG0280007434.01.T01 MTR_4g023120 28.745 247 125 12 29 263 98 305 1.49e-15 77.4
MsG0280007434.01.T01 MTR_1g094210 27.076 277 143 12 27 295 152 377 1.73e-15 77.4
MsG0280007434.01.T01 MTR_3g030350 25.676 296 179 11 28 316 130 391 1.74e-15 77.4
MsG0280007434.01.T01 MTR_1g097490 27.491 291 169 11 27 316 142 391 2.05e-15 77.0
MsG0280007434.01.T01 MTR_6g079810 24.062 320 176 15 29 311 171 460 2.59e-15 77.0
MsG0280007434.01.T01 MTR_2g021155 28.571 224 125 10 27 245 128 321 2.93e-15 77.4
MsG0280007434.01.T01 MTR_5g011200 23.982 221 136 7 27 245 115 305 4.87e-15 75.9
MsG0280007434.01.T01 MTR_4g134560 28.244 262 146 12 19 266 152 385 6.01e-15 75.9
MsG0280007434.01.T01 MTR_3g010590 28.625 269 146 15 55 316 157 386 1.79e-14 74.3
MsG0280007434.01.T01 MTR_6g027910 24.917 301 185 13 25 316 107 375 2.55e-14 73.6
MsG0280007434.01.T01 MTR_3g011020 30.000 160 95 4 91 245 158 305 3.97e-14 73.2
MsG0280007434.01.T01 MTR_1g055375 25.574 305 170 15 27 316 105 367 4.34e-14 72.8
MsG0280007434.01.T01 MTR_3g024150 24.749 299 178 12 22 316 131 386 5.14e-14 72.8
MsG0280007434.01.T01 MTR_1g113900 26.894 264 159 13 57 317 15 247 5.99e-14 71.2
MsG0280007434.01.T01 MTR_2g043410 26.875 320 166 16 27 315 134 416 8.72e-14 72.4
MsG0280007434.01.T01 MTR_7g066840 25.552 317 173 14 24 315 119 397 1.59e-13 71.6
MsG0280007434.01.T01 MTR_0134s0060 24.169 331 176 16 28 315 115 413 1.64e-13 71.6
MsG0280007434.01.T01 MTR_0128s0010 25.097 259 161 7 27 271 117 356 1.80e-13 71.2
MsG0280007434.01.T01 MTR_8g064890 27.350 234 131 12 52 272 137 344 1.94e-13 71.2
MsG0280007434.01.T01 MTR_4g117720 26.070 257 151 10 29 279 110 333 1.98e-13 70.9
MsG0280007434.01.T01 MTR_7g445890 23.676 321 190 11 27 316 87 383 2.01e-13 70.9
MsG0280007434.01.T01 MTR_3g006530 26.230 305 173 14 20 316 137 397 2.18e-13 70.9
MsG0280007434.01.T01 MTR_4g023130 26.562 256 134 11 23 270 57 266 2.76e-13 70.1
MsG0280007434.01.T01 MTR_0128s0070 25.468 267 154 10 27 276 122 360 2.78e-13 70.9
MsG0280007434.01.T01 MTR_6g053260 28.054 221 123 13 27 243 434 622 2.81e-13 71.2
MsG0280007434.01.T01 MTR_2g043400 24.699 332 174 15 20 315 126 417 2.93e-13 70.9
MsG0280007434.01.T01 MTR_3g009290 30.488 164 96 5 22 184 114 260 3.24e-13 69.3
MsG0280007434.01.T01 MTR_6g017295 22.909 275 164 11 27 274 41 294 3.40e-13 70.9
MsG0280007434.01.T01 MTR_4g024890 25.080 311 180 13 27 316 107 385 4.04e-13 70.1
MsG0280007434.01.T01 MTR_4g014370 29.134 254 135 14 20 245 108 344 4.75e-13 70.1
MsG0280007434.01.T01 MTR_4g023070 24.919 309 166 14 29 315 98 362 5.18e-13 69.7
MsG0280007434.01.T01 MTR_6g007150 26.316 304 180 11 25 316 67 338 5.20e-13 69.3
MsG0280007434.01.T01 MTR_6g086825 25.172 290 163 14 28 294 174 432 5.53e-13 70.1
MsG0280007434.01.T01 MTR_4g107820 25.735 272 158 9 8 272 111 345 6.94e-13 69.3
MsG0280007434.01.T01 MTR_4g107780 25.735 272 158 9 8 272 111 345 6.94e-13 69.3
MsG0280007434.01.T01 MTR_4g107780 25.735 272 158 9 8 272 111 345 7.24e-13 69.3
MsG0280007434.01.T01 MTR_4g107820 25.735 272 158 9 8 272 111 345 7.50e-13 69.3
MsG0280007434.01.T01 MTR_4g031770 23.642 313 175 10 27 316 98 369 8.05e-13 69.3
MsG0280007434.01.T01 MTR_4g023080 26.800 250 129 11 29 270 104 307 8.19e-13 68.9
MsG0280007434.01.T01 MTR_7g070440 25.225 222 152 7 27 245 95 305 8.43e-13 68.9
MsG0280007434.01.T01 MTR_6g090180 24.390 328 177 15 17 308 140 432 8.85e-13 69.3
MsG0280007434.01.T01 MTR_6g014720 26.073 303 185 13 25 318 105 377 1.58e-12 68.2
MsG0280007434.01.T01 MTR_7g079160 25.874 286 147 13 27 274 125 383 1.62e-12 68.6
MsG0280007434.01.T01 MTR_1g055065 26.198 313 179 16 21 316 11 288 1.92e-12 67.4
MsG0280007434.01.T01 MTR_4g118380 27.106 273 161 12 30 296 115 355 2.05e-12 67.8
MsG0280007434.01.T01 MTR_4g008790 25.249 301 149 11 27 297 163 417 2.12e-12 68.2
MsG0280007434.01.T01 MTR_4g019990 24.516 310 182 13 27 314 108 387 2.91e-12 67.4
MsG0280007434.01.T01 MTR_3g030240 26.792 265 147 12 55 316 158 378 3.14e-12 67.4
MsG0280007434.01.T01 MTR_6g478230 25.767 326 171 16 29 321 131 418 3.50e-12 67.4
MsG0280007434.01.T01 MTR_6g013270 25.743 303 187 13 25 318 122 395 3.89e-12 67.4
MsG0280007434.01.T01 MTR_5g057690 23.492 315 186 11 7 316 120 384 4.10e-12 67.0
MsG0280007434.01.T01 MTR_1g442850 23.871 310 182 10 27 315 99 375 4.11e-12 67.0
MsG0280007434.01.T01 MTR_0128s0020 24.345 267 158 8 27 276 118 357 4.35e-12 67.0
MsG0280007434.01.T01 MTR_6g079770 24.916 297 164 14 29 294 121 389 4.50e-12 67.0
MsG0280007434.01.T01 MTR_7g052670 21.905 315 206 12 27 315 124 424 4.57e-12 67.0
MsG0280007434.01.T01 MTR_3g030250 26.370 292 167 13 27 316 135 380 4.73e-12 67.0
MsG0280007434.01.T01 MTR_4g117850 25.600 250 144 9 25 266 112 327 4.83e-12 67.0
MsG0280007434.01.T01 MTR_7g056820 24.922 321 181 15 16 316 95 375 5.23e-12 66.6
MsG0280007434.01.T01 MTR_0831s0010 26.482 253 150 12 5 245 128 356 7.10e-12 66.6
MsG0280007434.01.T01 MTR_4g116330 24.919 309 169 14 29 324 121 379 7.26e-12 66.2
MsG0280007434.01.T01 MTR_2g047892 25.941 239 120 8 28 243 119 323 7.38e-12 66.2
MsG0280007434.01.T01 MTR_7g061050 24.590 305 185 11 27 315 108 383 7.46e-12 66.2
MsG0280007434.01.T01 MTR_3g007390 26.415 159 101 4 89 245 1 145 9.71e-12 63.9
MsG0280007434.01.T01 MTR_4g030090 25.726 241 144 10 27 254 111 329 1.14e-11 65.9
MsG0280007434.01.T01 MTR_5g056020 23.235 340 186 12 24 315 108 420 1.56e-11 65.9
MsG0280007434.01.T01 MTR_4g023090 24.026 308 184 12 29 322 112 383 2.30e-11 64.7
MsG0280007434.01.T01 MTR_3g072470 24.847 326 174 15 27 317 130 419 2.62e-11 64.7
MsG0280007434.01.T01 MTR_4g129190 22.981 322 198 11 20 315 92 389 2.80e-11 64.7
MsG0280007434.01.T01 MTR_7g056290 23.547 327 176 13 27 317 134 422 3.14e-11 64.7
MsG0280007434.01.T01 MTR_4g094365 28.731 268 151 12 51 303 115 357 3.56e-11 64.3
MsG0280007434.01.T01 MTR_5g070080 25.287 261 146 11 25 274 120 342 3.58e-11 64.3
MsG0280007434.01.T01 MTR_5g056990 28.448 232 137 11 89 316 34 240 4.15e-11 62.8
MsG0280007434.01.T01 MTR_6g092560 25.152 330 175 14 21 314 101 394 4.27e-11 64.3
MsG0280007434.01.T01 MTR_5g097350 23.311 296 163 14 30 307 131 380 4.62e-11 63.9
MsG0280007434.01.T01 MTR_6g065510 24.907 269 147 11 55 299 76 313 4.98e-11 63.5
MsG0280007434.01.T01 MTR_2g055970 24.000 250 151 10 27 271 305 520 5.48e-11 63.9
MsG0280007434.01.T01 MTR_3g030310 22.185 302 186 13 28 316 126 391 5.77e-11 63.5
MsG0280007434.01.T01 MTR_2g046800 26.421 299 180 12 22 318 135 395 6.13e-11 63.5
MsG0280007434.01.T01 MTR_3g034180 25.000 256 145 11 25 266 216 438 6.25e-11 63.9
MsG0280007434.01.T01 MTR_3g010450 29.379 177 97 8 21 196 81 230 6.73e-11 62.4
MsG0280007434.01.T01 MTR_3g011650 34.074 135 70 7 28 162 170 285 7.42e-11 62.4
MsG0280007434.01.T01 MTR_3g464500 24.907 269 162 9 27 277 120 366 7.96e-11 63.2
MsG0280007434.01.T01 MTR_2g104340 24.138 290 168 14 54 313 128 395 8.44e-11 63.2
MsG0280007434.01.T01 MTR_1g058190 25.275 273 157 12 59 314 127 369 8.77e-11 63.2
MsG0280007434.01.T01 MTR_6g055210 26.426 333 182 15 22 315 111 419 9.89e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007434.01.T01 AT4G12560 33.238 349 179 10 27 347 91 413 1.89e-45 160
MsG0280007434.01.T01 AT4G12560 33.238 349 179 10 27 347 91 413 1.89e-45 160
MsG0280007434.01.T01 AT4G12560 33.238 349 179 10 27 347 91 413 1.89e-45 160
MsG0280007434.01.T01 AT4G22390 28.070 342 194 9 27 347 91 401 1.05e-29 117
MsG0280007434.01.T01 AT4G22390 28.406 345 190 10 27 347 91 402 1.06e-28 115
MsG0280007434.01.T01 AT3G06240 28.000 300 166 13 25 316 163 420 3.91e-19 88.2

Find 88 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCGCACCTTGCCTCTTAT+TGG 0.172542 2:+15410340 MsG0280007434.01.T01:CDS
TAAAATTTGTGTTGCTGTTT+TGG 0.179448 2:+15410885 MsG0280007434.01.T01:CDS
GGGATAGGAAGAGGGATAAA+AGG 0.258612 2:-15410475 None:intergenic
TTGTTCAGAATTCTCTTCAC+TGG 0.289716 2:+15410725 MsG0280007434.01.T01:CDS
CCTCTTCCTGTTGAATTAGA+AGG 0.299288 2:+15410829 MsG0280007434.01.T01:CDS
AAACTACTAAAATTGATGTT+TGG 0.301588 2:+15410938 MsG0280007434.01.T01:CDS
AGTTTGTAATCGGCGGTTAA+TGG 0.306388 2:-15410562 None:intergenic
TCCTTCTTACAATTATCAAC+AGG 0.311993 2:-15411231 None:intergenic
GAATTCTCTTCACTGGGTTA+TGG 0.319977 2:+15410732 MsG0280007434.01.T01:CDS
CTAACTTGCATAAAACTCTT+AGG 0.329090 2:+15411100 MsG0280007434.01.T01:CDS
AACTACTAAAATTGATGTTT+GGG 0.346393 2:+15410939 MsG0280007434.01.T01:CDS
ATGAATTGTTTGCGGGTGTT+AGG 0.347174 2:-15410448 None:intergenic
ACACATATACTGCCGCGATC+GGG 0.367415 2:-15410520 None:intergenic
ATGTGACCCATCAAGTTTCT+TGG 0.370575 2:-15410755 None:intergenic
AGTATATGTGTTCACGGCTT+CGG 0.377996 2:+15410532 MsG0280007434.01.T01:CDS
ATCATGTTTCAATTCACCTT+TGG 0.383434 2:+15411017 MsG0280007434.01.T01:CDS
GGATTTAAACTGAAATTGTA+AGG 0.412934 2:+15411868 MsG0280007434.01.T01:CDS
AAACTCTTAGGAAGCTGGTT+TGG 0.413773 2:+15411112 MsG0280007434.01.T01:CDS
GGATAGGAAGAGGGATAAAA+GGG 0.415501 2:-15410474 None:intergenic
AGGGATGATGAATTGTTTGC+GGG 0.419318 2:-15410455 None:intergenic
TGAAGAGCATACGGCATACT+AGG 0.426348 2:-15410679 None:intergenic
TCTTCACCTTCTAATTCAAC+AGG 0.427716 2:-15410835 None:intergenic
GAACAAGTTAGTTATGTTGA+AGG 0.431164 2:+15411150 MsG0280007434.01.T01:CDS
TTGTCAGATCCCTCAATGTC+AGG 0.432194 2:-15410496 None:intergenic
GATTCTGAGGAGTTTGTAAT+CGG 0.442972 2:-15410572 None:intergenic
GCCTTCTCGAAACCACAATC+TGG 0.445136 2:+15410422 MsG0280007434.01.T01:CDS
CTTCCTATCCCTGACATTGA+GGG 0.445532 2:+15410487 MsG0280007434.01.T01:CDS
ACAATTTCAGTTTAAATCCT+CGG 0.445585 2:-15411864 None:intergenic
GTTTGGGGTGATGAACAATA+TGG 0.448382 2:+15410955 MsG0280007434.01.T01:CDS
CCTCTTATTGGTTCATGTAA+CGG 0.453171 2:+15410352 MsG0280007434.01.T01:CDS
GTTATGGCCAAGAAACTTGA+TGG 0.458938 2:+15410748 MsG0280007434.01.T01:CDS
AACTTGATGGGTCACATCCT+TGG 0.459348 2:+15410761 MsG0280007434.01.T01:CDS
GCATAAAACTCTTAGGAAGC+TGG 0.463890 2:+15411107 MsG0280007434.01.T01:CDS
TGATGGAGGTAAGGTTCTGT+TGG 0.467037 2:+15411068 MsG0280007434.01.T01:CDS
CAATTTCAGTTTAAATCCTC+GGG 0.468708 2:-15411863 None:intergenic
CCCTGTTGATAATTGTAAGA+AGG 0.470055 2:+15411230 MsG0280007434.01.T01:CDS
CCTTCTAATTCAACAGGAAG+AGG 0.488144 2:-15410829 None:intergenic
TGGTTTCGAGAAGGCCATAA+GGG 0.490976 2:-15410414 None:intergenic
TGAATTGTTTGCGGGTGTTA+GGG 0.493659 2:-15410447 None:intergenic
GTGGTTTCGAGAAGGCCATA+AGG 0.494242 2:-15410415 None:intergenic
TGTTCAGAATTCTCTTCACT+GGG 0.498073 2:+15410726 MsG0280007434.01.T01:CDS
TCTTCCTATCCCTGACATTG+AGG 0.503305 2:+15410486 MsG0280007434.01.T01:CDS
AACACATATACTGCCGCGAT+CGG 0.506549 2:-15410521 None:intergenic
CTTCAATATGTTCAAGCCAT+GGG 0.510590 2:+15410697 MsG0280007434.01.T01:CDS
GAGGTTAACAGTAATAGTAA+TGG 0.512618 2:+15410856 MsG0280007434.01.T01:CDS
CGCGGCAGTATATGTGTTCA+CGG 0.513296 2:+15410526 MsG0280007434.01.T01:CDS
AAACAACTTCTCCGTCAGAA+AGG 0.515423 2:-15410384 None:intergenic
CCGTTACATGAACCAATAAG+AGG 0.516403 2:-15410352 None:intergenic
AACAACTTCTCCGTCAGAAA+GGG 0.519137 2:-15410383 None:intergenic
TTATTCTAGTGATGGAGGTA+AGG 0.519887 2:+15411059 MsG0280007434.01.T01:CDS
CAATTATCAACAGGGAAGAA+AGG 0.521482 2:-15411222 None:intergenic
CCGTTGTGTTATTCTAGTGA+TGG 0.523682 2:+15411051 MsG0280007434.01.T01:CDS
GGCCTCCTCGCCCTTTCTGA+CGG 0.527527 2:+15410373 MsG0280007434.01.T01:CDS
CACATATACTGCCGCGATCG+GGG 0.531244 2:-15410519 None:intergenic
TCAGTTTGAAAACAAACTCG+TGG 0.546173 2:+15410647 MsG0280007434.01.T01:CDS
TCAATGTCAGGGATAGGAAG+AGG 0.555308 2:-15410484 None:intergenic
AAGGGATGATGAATTGTTTG+CGG 0.560350 2:-15410456 None:intergenic
GATCCCTCAATGTCAGGGAT+AGG 0.561405 2:-15410490 None:intergenic
TTCAATATGTTCAAGCCATG+GGG 0.564135 2:+15410698 MsG0280007434.01.T01:CDS
GGTGTTAGGGTTCCAGATTG+TGG 0.566051 2:-15410434 None:intergenic
TCTTCAATATGTTCAAGCCA+TGG 0.568483 2:+15410696 MsG0280007434.01.T01:CDS
TCCAGATTGTGGTTTCGAGA+AGG 0.570412 2:-15410423 None:intergenic
CATTGAAAATTTCAAGTGTG+AGG 0.576501 2:-15410801 None:intergenic
TGAACATATTGAAGAGCATA+CGG 0.578908 2:-15410688 None:intergenic
TGTTGAATTAGAAGGTGAAG+AGG 0.584395 2:+15410837 MsG0280007434.01.T01:CDS
CTTCTCCGTCAGAAAGGGCG+AGG 0.593688 2:-15410378 None:intergenic
CAAATAACCAAGTGATTCTG+AGG 0.594320 2:-15410585 None:intergenic
AATATGGATCTAGAGATAGT+TGG 0.594791 2:+15410971 MsG0280007434.01.T01:CDS
ACAAACTCCTCAGAATCACT+TGG 0.598410 2:+15410578 MsG0280007434.01.T01:CDS
GATTTAAACTGAAATTGTAA+GGG 0.604991 2:+15411869 MsG0280007434.01.T01:CDS
GGATCTGACAACCCCGATCG+CGG 0.606309 2:+15410508 MsG0280007434.01.T01:CDS
CCTTCTTACAATTATCAACA+GGG 0.610924 2:-15411230 None:intergenic
AGCGTCCTCAGATGAGAGTG+TGG 0.618549 2:+15409779 MsG0280007434.01.T01:CDS
CAATGTCAGGGATAGGAAGA+GGG 0.620469 2:-15410483 None:intergenic
TTGTGTTATTCTAGTGATGG+AGG 0.622635 2:+15411054 MsG0280007434.01.T01:CDS
TGTCAGATCCCTCAATGTCA+GGG 0.629757 2:-15410495 None:intergenic
TTATGGCCAAGAAACTTGAT+GGG 0.632514 2:+15410749 MsG0280007434.01.T01:CDS
TCTGAGGAGTTTGTAATCGG+CGG 0.638156 2:-15410569 None:intergenic
GCGATCCACACTCTCATCTG+AGG 0.638635 2:-15409784 None:intergenic
ACATGAACCAATAAGAGGCA+AGG 0.639826 2:-15410347 None:intergenic
CTCCGTCAGAAAGGGCGAGG+AGG 0.643032 2:-15410375 None:intergenic
AACCAATAAGAGGCAAGGTG+CGG 0.656078 2:-15410342 None:intergenic
AGGGACGACTTCTTGTCCCG+AGG 0.669398 2:+15411847 MsG0280007434.01.T01:intron
TCAATATGTTCAAGCCATGG+GGG 0.669674 2:+15410699 MsG0280007434.01.T01:CDS
AAGACTTCCAACATAAAACA+TGG 0.671186 2:-15411193 None:intergenic
ACTACTAAAATTGATGTTTG+GGG 0.694155 2:+15410940 MsG0280007434.01.T01:CDS
TTAAATGCGACAATTAACCA+AGG 0.698873 2:-15410778 None:intergenic
CCATCACTAGAATAACACAA+CGG 0.759696 2:-15411051 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTGAATTCTTATTAT+AGG + Chr2:15411386-15411405 MsG0280007434.01.T01:intron 10.0%
!! AATGAAACTATGAATAAATT+TGG - Chr2:15411738-15411757 None:intergenic 15.0%
!! TAATAATGATAAATCAAAGA+AGG + Chr2:15410000-15410019 MsG0280007434.01.T01:intron 15.0%
!! AAACTACTAAAATTGATGTT+TGG + Chr2:15410938-15410957 MsG0280007434.01.T01:CDS 20.0%
!! AACTACTAAAATTGATGTTT+GGG + Chr2:15410939-15410958 MsG0280007434.01.T01:CDS 20.0%
!! ACTACATATATATCATATGA+TGG - Chr2:15411348-15411367 None:intergenic 20.0%
!! CTACATATATATCATATGAT+GGG - Chr2:15411347-15411366 None:intergenic 20.0%
!! GTTGGTCAAAATAATTATTT+AGG - Chr2:15411625-15411644 None:intergenic 20.0%
!!! ATAAATTTGGAGTAATTTCA+TGG - Chr2:15411725-15411744 None:intergenic 20.0%
!!! GTTAAGTTTAGGTTTAAATT+AGG + Chr2:15409855-15409874 MsG0280007434.01.T01:intron 20.0%
!!! TTTGCTTAAAGAAAGAATTT+TGG + Chr2:15411558-15411577 MsG0280007434.01.T01:intron 20.0%
! AAATGTTATAGCTTAAAGGA+TGG - Chr2:15410295-15410314 None:intergenic 25.0%
! AAGCAAATGTTATAGCTTAA+AGG - Chr2:15410299-15410318 None:intergenic 25.0%
! AAGGATTATAAATCGATTGA+GGG - Chr2:15410202-15410221 None:intergenic 25.0%
! ACAATTTCAGTTTAAATCCT+CGG - Chr2:15411867-15411886 None:intergenic 25.0%
! ACTACTAAAATTGATGTTTG+GGG + Chr2:15410940-15410959 MsG0280007434.01.T01:CDS 25.0%
! AGGTTTAGTAATTAAGCTTT+AGG + Chr2:15409875-15409894 MsG0280007434.01.T01:intron 25.0%
! TAAAATTAGGGCTTCAATAT+TGG + Chr2:15409936-15409955 MsG0280007434.01.T01:intron 25.0%
! TATAAGTTATACCAGTTCAA+TGG + Chr2:15411320-15411339 MsG0280007434.01.T01:intron 25.0%
! TGAATTCTTATTATAGGACA+AGG + Chr2:15411392-15411411 MsG0280007434.01.T01:intron 25.0%
! TGTCACATATACATAAACAA+AGG - Chr2:15411444-15411463 None:intergenic 25.0%
!! AAGTGGAGTAAATTGTTATT+TGG + Chr2:15411689-15411708 MsG0280007434.01.T01:intron 25.0%
!! CTAGGTTTAGGTTAAAATTA+GGG + Chr2:15409924-15409943 MsG0280007434.01.T01:intron 25.0%
!! TTGGTGTAAACTTTTTACTT+TGG + Chr2:15410990-15411009 MsG0280007434.01.T01:CDS 25.0%
!!! AAAATTTGTGTTGCTGTTTT+GGG + Chr2:15410886-15410905 MsG0280007434.01.T01:CDS 25.0%
!!! AAATTTTTTAGCTAGTCACA+AGG - Chr2:15411541-15411560 None:intergenic 25.0%
!!! AGATTCATTTTTTTTCCACA+GGG + Chr2:15411828-15411847 MsG0280007434.01.T01:intron 25.0%
!!! CTAATTTTAACCTAAACCTA+GGG - Chr2:15409925-15409944 None:intergenic 25.0%
!!! TAAAATTTGTGTTGCTGTTT+TGG + Chr2:15410885-15410904 MsG0280007434.01.T01:CDS 25.0%
!!! TTAAGTGATTTTGAAGTGAT+CGG - Chr2:15410129-15410148 None:intergenic 25.0%
AAACAGGAAATTTAATCCCT+AGG + Chr2:15409906-15409925 MsG0280007434.01.T01:intron 30.0%
AAGACTTCCAACATAAAACA+TGG - Chr2:15411196-15411215 None:intergenic 30.0%
AATATGGATCTAGAGATAGT+TGG + Chr2:15410971-15410990 MsG0280007434.01.T01:CDS 30.0%
AGGATTATAAATCGATTGAG+GGG - Chr2:15410201-15410220 None:intergenic 30.0%
ATCATGTTTCAATTCACCTT+TGG + Chr2:15411017-15411036 MsG0280007434.01.T01:CDS 30.0%
CAATTTCAGTTTAAATCCTC+GGG - Chr2:15411866-15411885 None:intergenic 30.0%
CATAGTTTCATTCAAAAGCA+TGG + Chr2:15411746-15411765 MsG0280007434.01.T01:intron 30.0%
CCTTCTTACAATTATCAACA+GGG - Chr2:15411233-15411252 None:intergenic 30.0%
CTCAACATTCAGAAATAAGT+TGG - Chr2:15411643-15411662 None:intergenic 30.0%
GAAATTGTGAGAATCGATTA+AGG - Chr2:15410154-15410173 None:intergenic 30.0%
GAAATTTAATCCCTAGGTTT+AGG + Chr2:15409912-15409931 MsG0280007434.01.T01:intron 30.0%
GAACAAGTTAGTTATGTTGA+AGG + Chr2:15411150-15411169 MsG0280007434.01.T01:CDS 30.0%
GAAGGATTATAAATCGATTG+AGG - Chr2:15410203-15410222 None:intergenic 30.0%
GAGGTTAACAGTAATAGTAA+TGG + Chr2:15410856-15410875 MsG0280007434.01.T01:CDS 30.0%
GGGGAAAAATTGTTAAGTTT+AGG + Chr2:15409844-15409863 MsG0280007434.01.T01:intron 30.0%
GTTGTTGCCTATAGATAAAA+CGG - Chr2:15410323-15410342 None:intergenic 30.0%
TCCTTCTTACAATTATCAAC+AGG - Chr2:15411234-15411253 None:intergenic 30.0%
TTAAATGCGACAATTAACCA+AGG - Chr2:15410781-15410800 None:intergenic 30.0%
! AGAAATCATCATCATCGATT+TGG - Chr2:15410250-15410269 None:intergenic 30.0%
! CACACTTGAAATTTTCAATG+TGG + Chr2:15410804-15410823 MsG0280007434.01.T01:CDS 30.0%
! CATTGAAAATTTCAAGTGTG+AGG - Chr2:15410804-15410823 None:intergenic 30.0%
! CCTAGGTTTAGGTTAAAATT+AGG + Chr2:15409923-15409942 MsG0280007434.01.T01:intron 30.0%
! CTAACTTGCATAAAACTCTT+AGG + Chr2:15411100-15411119 MsG0280007434.01.T01:CDS 30.0%
! TGAACATATTGAAGAGCATA+CGG - Chr2:15410691-15410710 None:intergenic 30.0%
! TTGCTTTCCGTTTTATCTAT+AGG + Chr2:15410313-15410332 MsG0280007434.01.T01:intron 30.0%
!! CCTAATTTTAACCTAAACCT+AGG - Chr2:15409926-15409945 None:intergenic 30.0%
!! CTAAGAGTTTTATGCAAGTT+AGG - Chr2:15411102-15411121 None:intergenic 30.0%
!! TAGTAATTAAGCTTTAGGTC+AGG + Chr2:15409880-15409899 MsG0280007434.01.T01:intron 30.0%
!!! ATTCACCTTTGGATTTTTTG+AGG + Chr2:15411028-15411047 MsG0280007434.01.T01:CDS 30.0%
!!! GAGATTCATTTTTTTTCCAC+AGG + Chr2:15411827-15411846 MsG0280007434.01.T01:intron 30.0%
!!! GGGGATTATTTTTTATGTGA+AGG - Chr2:15410182-15410201 None:intergenic 30.0%
AAGATTTCGGCAAGTATTTC+CGG - Chr2:15410073-15410092 None:intergenic 35.0%
AAGGGATGATGAATTGTTTG+CGG - Chr2:15410459-15410478 None:intergenic 35.0%
CAAATAACCAAGTGATTCTG+AGG - Chr2:15410588-15410607 None:intergenic 35.0%
CAATTATCAACAGGGAAGAA+AGG - Chr2:15411225-15411244 None:intergenic 35.0%
CCATCACTAGAATAACACAA+CGG - Chr2:15411054-15411073 None:intergenic 35.0%
CTACAAGCAAAAACAAGAGA+AGG + Chr2:15411259-15411278 MsG0280007434.01.T01:CDS 35.0%
CTTCAATATGTTCAAGCCAT+GGG + Chr2:15410697-15410716 MsG0280007434.01.T01:CDS 35.0%
GTAGTTAAACTCGATGCTAA+AGG + Chr2:15411363-15411382 MsG0280007434.01.T01:intron 35.0%
TCAGTTTGAAAACAAACTCG+TGG + Chr2:15410647-15410666 MsG0280007434.01.T01:CDS 35.0%
TCTTCAATATGTTCAAGCCA+TGG + Chr2:15410696-15410715 MsG0280007434.01.T01:CDS 35.0%
TCTTCACCTTCTAATTCAAC+AGG - Chr2:15410838-15410857 None:intergenic 35.0%
TGTTCAGAATTCTCTTCACT+GGG + Chr2:15410726-15410745 MsG0280007434.01.T01:CDS 35.0%
TGTTGAATTAGAAGGTGAAG+AGG + Chr2:15410837-15410856 MsG0280007434.01.T01:CDS 35.0%
TTATGGCCAAGAAACTTGAT+GGG + Chr2:15410749-15410768 MsG0280007434.01.T01:CDS 35.0%
TTCAATATGTTCAAGCCATG+GGG + Chr2:15410698-15410717 MsG0280007434.01.T01:CDS 35.0%
TTGTTCAGAATTCTCTTCAC+TGG + Chr2:15410725-15410744 MsG0280007434.01.T01:CDS 35.0%
! GAAGAAGCCATGTTTTATGT+TGG + Chr2:15411186-15411205 MsG0280007434.01.T01:CDS 35.0%
! GATTCTGAGGAGTTTGTAAT+CGG - Chr2:15410575-15410594 None:intergenic 35.0%
! TTATTCTAGTGATGGAGGTA+AGG + Chr2:15411059-15411078 MsG0280007434.01.T01:CDS 35.0%
! TTGTGTTATTCTAGTGATGG+AGG + Chr2:15411054-15411073 MsG0280007434.01.T01:CDS 35.0%
!! CCCTGTTGATAATTGTAAGA+AGG + Chr2:15411230-15411249 MsG0280007434.01.T01:CDS 35.0%
!! CCTCTTATTGGTTCATGTAA+CGG + Chr2:15410352-15410371 MsG0280007434.01.T01:CDS 35.0%
!!! CTTCTCTTGTTTTTGCTTGT+AGG - Chr2:15411261-15411280 None:intergenic 35.0%
!!! GATTTTGAAGTGATCGGAAT+CGG - Chr2:15410123-15410142 None:intergenic 35.0%
AAACAACTTCTCCGTCAGAA+AGG - Chr2:15410387-15410406 None:intergenic 40.0%
AAACTCTTAGGAAGCTGGTT+TGG + Chr2:15411112-15411131 MsG0280007434.01.T01:CDS 40.0%
AACAACTTCTCCGTCAGAAA+GGG - Chr2:15410386-15410405 None:intergenic 40.0%
AACGGCCTCAAAAAATCCAA+AGG - Chr2:15411036-15411055 None:intergenic 40.0%
AATCGGAGAAGTGATTGAAC+CGG - Chr2:15410106-15410125 None:intergenic 40.0%
ACAAACTCCTCAGAATCACT+TGG + Chr2:15410578-15410597 MsG0280007434.01.T01:CDS 40.0%
ACATGAACCAATAAGAGGCA+AGG - Chr2:15410350-15410369 None:intergenic 40.0%
AGGGATGATGAATTGTTTGC+GGG - Chr2:15410458-15410477 None:intergenic 40.0%
AGTATATGTGTTCACGGCTT+CGG + Chr2:15410532-15410551 MsG0280007434.01.T01:CDS 40.0%
AGTTTGTAATCGGCGGTTAA+TGG - Chr2:15410565-15410584 None:intergenic 40.0%
ATGAATTGTTTGCGGGTGTT+AGG - Chr2:15410451-15410470 None:intergenic 40.0%
ATGTGACAATGTGTGTATGC+TGG + Chr2:15411456-15411475 MsG0280007434.01.T01:intron 40.0%
ATGTGACCCATCAAGTTTCT+TGG - Chr2:15410758-15410777 None:intergenic 40.0%
ATTCTGAACAAAAACCCCCA+TGG - Chr2:15410716-15410735 None:intergenic 40.0%
CCGTTACATGAACCAATAAG+AGG - Chr2:15410355-15410374 None:intergenic 40.0%
CCTCTTCCTGTTGAATTAGA+AGG + Chr2:15410829-15410848 MsG0280007434.01.T01:CDS 40.0%
CCTTCTAATTCAACAGGAAG+AGG - Chr2:15410832-15410851 None:intergenic 40.0%
GAATTCTCTTCACTGGGTTA+TGG + Chr2:15410732-15410751 MsG0280007434.01.T01:CDS 40.0%
GCATAAAACTCTTAGGAAGC+TGG + Chr2:15411107-15411126 MsG0280007434.01.T01:CDS 40.0%
GGATAGGAAGAGGGATAAAA+GGG - Chr2:15410477-15410496 None:intergenic 40.0%
GTTATGGCCAAGAAACTTGA+TGG + Chr2:15410748-15410767 MsG0280007434.01.T01:CDS 40.0%
TAGCTTAAAGGATGGTTGAG+TGG - Chr2:15410287-15410306 None:intergenic 40.0%
TCAATATGTTCAAGCCATGG+GGG + Chr2:15410699-15410718 MsG0280007434.01.T01:CDS 40.0%
TGAATTGTTTGCGGGTGTTA+GGG - Chr2:15410450-15410469 None:intergenic 40.0%
! CCGTTGTGTTATTCTAGTGA+TGG + Chr2:15411051-15411070 MsG0280007434.01.T01:CDS 40.0%
! GCTTTAGGTCAGGTTAAAAC+AGG + Chr2:15409890-15409909 MsG0280007434.01.T01:intron 40.0%
! GTTTGGGGTGATGAACAATA+TGG + Chr2:15410955-15410974 MsG0280007434.01.T01:CDS 40.0%
! TTAGGGCTTCAATATTGGCT+TGG + Chr2:15409941-15409960 MsG0280007434.01.T01:intron 40.0%
!! ATATGATGGGTCCATTGAAC+TGG - Chr2:15411334-15411353 None:intergenic 40.0%
!! CATCATCATCGATTTGGAGT+TGG - Chr2:15410244-15410263 None:intergenic 40.0%
!! GATTTGGAGTTGGTAGAGAT+CGG - Chr2:15410234-15410253 None:intergenic 40.0%
!! GTTGTTTTCAAGCACCCTTA+TGG + Chr2:15410400-15410419 MsG0280007434.01.T01:CDS 40.0%
!! TAGGGCTTCAATATTGGCTT+GGG + Chr2:15409942-15409961 MsG0280007434.01.T01:intron 40.0%
AACACATATACTGCCGCGAT+CGG - Chr2:15410524-15410543 None:intergenic 45.0%
AACCAATAAGAGGCAAGGTG+CGG - Chr2:15410345-15410364 None:intergenic 45.0%
AAGAAACGCGTGAGAGAAAG+AGG + Chr2:15409823-15409842 MsG0280007434.01.T01:intron 45.0%
AAGTGATTGAACCGGTAAGC+GGG - Chr2:15410098-15410117 None:intergenic 45.0%
AGAAACGCGTGAGAGAAAGA+GGG + Chr2:15409824-15409843 MsG0280007434.01.T01:intron 45.0%
ATTGGAAGGAAGGAGGGTTT+AGG - Chr2:15410032-15410051 None:intergenic 45.0%
ATTTCGGCAAGTATTTCCGG+CGG - Chr2:15410070-15410089 None:intergenic 45.0%
CAATGTCAGGGATAGGAAGA+GGG - Chr2:15410486-15410505 None:intergenic 45.0%
CCACTTTACATACCACAGCA+GGG - Chr2:15411675-15411694 None:intergenic 45.0%
CTTCCTATCCCTGACATTGA+GGG + Chr2:15410487-15410506 MsG0280007434.01.T01:CDS 45.0%
GAAGTGATTGAACCGGTAAG+CGG - Chr2:15410099-15410118 None:intergenic 45.0%
GGGATAGGAAGAGGGATAAA+AGG - Chr2:15410478-15410497 None:intergenic 45.0%
TAAACCCTCCTTCCTTCCAA+TGG + Chr2:15410031-15410050 MsG0280007434.01.T01:intron 45.0%
TAGAGATCGGATTGTGTCGA+AGG - Chr2:15410221-15410240 None:intergenic 45.0%
TCAATGTCAGGGATAGGAAG+AGG - Chr2:15410487-15410506 None:intergenic 45.0%
TCCACTTTACATACCACAGC+AGG - Chr2:15411676-15411695 None:intergenic 45.0%
TCCAGATTGTGGTTTCGAGA+AGG - Chr2:15410426-15410445 None:intergenic 45.0%
TCTGAGGAGTTTGTAATCGG+CGG - Chr2:15410572-15410591 None:intergenic 45.0%
TCTTCCTATCCCTGACATTG+AGG + Chr2:15410486-15410505 MsG0280007434.01.T01:CDS 45.0%
TGATGGAGGTAAGGTTCTGT+TGG + Chr2:15411068-15411087 MsG0280007434.01.T01:CDS 45.0%
TGGTTTCGAGAAGGCCATAA+GGG - Chr2:15410417-15410436 None:intergenic 45.0%
TGTCAGATCCCTCAATGTCA+GGG - Chr2:15410498-15410517 None:intergenic 45.0%
TTGGAAGGAAGGAGGGTTTA+GGG - Chr2:15410031-15410050 None:intergenic 45.0%
TTGTCAGATCCCTCAATGTC+AGG - Chr2:15410499-15410518 None:intergenic 45.0%
! AACTTGATGGGTCACATCCT+TGG + Chr2:15410761-15410780 MsG0280007434.01.T01:CDS 45.0%
! TGAAGAGCATACGGCATACT+AGG - Chr2:15410682-15410701 None:intergenic 45.0%
AACCGCACCTTGCCTCTTAT+TGG + Chr2:15410340-15410359 MsG0280007434.01.T01:CDS 50.0%
ACACATATACTGCCGCGATC+GGG - Chr2:15410523-15410542 None:intergenic 50.0%
AGAACATCACCGCCATTGGA+AGG - Chr2:15410046-15410065 None:intergenic 50.0%
CCCTGCTGTGGTATGTAAAG+TGG + Chr2:15411672-15411691 MsG0280007434.01.T01:intron 50.0%
CGAAATCTTCTCCCGCTTAC+CGG + Chr2:15410084-15410103 MsG0280007434.01.T01:intron 50.0%
CGCGGCAGTATATGTGTTCA+CGG + Chr2:15410526-15410545 MsG0280007434.01.T01:CDS 50.0%
CGGTAAGCGGGAGAAGATTT+CGG - Chr2:15410086-15410105 None:intergenic 50.0%
CTTTACATACCACAGCAGGG+TGG - Chr2:15411672-15411691 None:intergenic 50.0%
GAAACGCGTGAGAGAAAGAG+GGG + Chr2:15409825-15409844 MsG0280007434.01.T01:intron 50.0%
GATCCCTCAATGTCAGGGAT+AGG - Chr2:15410493-15410512 None:intergenic 50.0%
GCCTTCTCGAAACCACAATC+TGG + Chr2:15410422-15410441 MsG0280007434.01.T01:CDS 50.0%
GGTGTTAGGGTTCCAGATTG+TGG - Chr2:15410437-15410456 None:intergenic 50.0%
GTGGTTTCGAGAAGGCCATA+AGG - Chr2:15410418-15410437 None:intergenic 50.0%
ACCCTCCTTCCTTCCAATGG+CGG + Chr2:15410034-15410053 MsG0280007434.01.T01:intron 55.0%
ACCGCCATTGGAAGGAAGGA+GGG - Chr2:15410038-15410057 None:intergenic 55.0%
AGCGTCCTCAGATGAGAGTG+TGG + Chr2:15409779-15409798 MsG0280007434.01.T01:CDS 55.0%
CACATATACTGCCGCGATCG+GGG - Chr2:15410522-15410541 None:intergenic 55.0%
CATCACCGCCATTGGAAGGA+AGG - Chr2:15410042-15410061 None:intergenic 55.0%
CGGAAGAACATCACCGCCAT+TGG - Chr2:15410050-15410069 None:intergenic 55.0%
GAGACTATTCCACCCTGCTG+TGG + Chr2:15411660-15411679 MsG0280007434.01.T01:intron 55.0%
GCGATCCACACTCTCATCTG+AGG - Chr2:15409787-15409806 None:intergenic 55.0%
AGGGACGACTTCTTGTCCCG+AGG + Chr2:15411847-15411866 MsG0280007434.01.T01:intron 60.0%
CACCGCCATTGGAAGGAAGG+AGG - Chr2:15410039-15410058 None:intergenic 60.0%
CTTCTCCGTCAGAAAGGGCG+AGG - Chr2:15410381-15410400 None:intergenic 60.0%
GGATCTGACAACCCCGATCG+CGG + Chr2:15410508-15410527 MsG0280007434.01.T01:CDS 60.0%
GGGACAAGAAGTCGTCCCTG+TGG - Chr2:15411846-15411865 None:intergenic 60.0%
TGGCGGTGATGTTCTTCCGC+CGG + Chr2:15410051-15410070 MsG0280007434.01.T01:intron 60.0%
CTCCGTCAGAAAGGGCGAGG+AGG - Chr2:15410378-15410397 None:intergenic 65.0%
GGCCTCCTCGCCCTTTCTGA+CGG + Chr2:15410373-15410392 MsG0280007434.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15409774 15411888 15409774 ID=MsG0280007434.01;Name=MsG0280007434.01
Chr2 mRNA 15409774 15411888 15409774 ID=MsG0280007434.01.T01;Parent=MsG0280007434.01;Name=MsG0280007434.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.66|0.5|0.66|3|0|347
Chr2 exon 15409774 15409831 15409774 ID=MsG0280007434.01.T01:exon:3320;Parent=MsG0280007434.01.T01
Chr2 exon 15410335 15411280 15410335 ID=MsG0280007434.01.T01:exon:3321;Parent=MsG0280007434.01.T01
Chr2 exon 15411849 15411888 15411849 ID=MsG0280007434.01.T01:exon:3322;Parent=MsG0280007434.01.T01
Chr2 CDS 15409774 15409831 15409774 ID=MsG0280007434.01.T01:cds;Parent=MsG0280007434.01.T01
Chr2 CDS 15410335 15411280 15410335 ID=MsG0280007434.01.T01:cds;Parent=MsG0280007434.01.T01
Chr2 CDS 15411849 15411888 15411849 ID=MsG0280007434.01.T01:cds;Parent=MsG0280007434.01.T01
Gene Sequence

>MsG0280007434.01.T01

ATGAGAGCGTCCTCAGATGAGAGTGTGGATCGCAGAGAGAGAGAGAGAGAAGAAACGCGCAACAACCGCACCTTGCCTCTTATTGGTTCATGTAACGGCCTCCTCGCCCTTTCTGACGGAGAAGTTGTTTTCAAGCACCCTTATGGCCTTCTCGAAACCACAATCTGGAACCCTAACACCCGCAAACAATTCATCATCCCTTTTATCCCTCTTCCTATCCCTGACATTGAGGGATCTGACAACCCCGATCGCGGCAGTATATGTGTTCACGGCTTCGGTTTTGATCCATTAACCGCCGATTACAAACTCCTCAGAATCACTTGGTTATTTGCTCGACAAAACATCTTTTATGATTCACATGTCAGTCTCTTCAGTTTGAAAACAAACTCGTGGAAAACAATTCCTAGTATGCCGTATGCTCTTCAATATGTTCAAGCCATGGGGGTTTTTGTTCAGAATTCTCTTCACTGGGTTATGGCCAAGAAACTTGATGGGTCACATCCTTGGTTAATTGTCGCATTTAACCTCACACTTGAAATTTTCAATGTGGTTCCTCTTCCTGTTGAATTAGAAGGTGAAGAGGTTAACAGTAATAGTAATGGAAGTTTTAAAATTTGTGTTGCTGTTTTGGGTGAGTGTCTTTGTATGACTGTGAAGTATGAAACTACTAAAATTGATGTTTGGGGTGATGAACAATATGGATCTAGAGATAGTTGGTGTAAACTTTTTACTTTGGTTGAATCATGTTTCAATTCACCTTTGGATTTTTTGAGGCCGTTGTGTTATTCTAGTGATGGAGGTAAGGTTCTGTTGGAAGCAAATCCTAACTTGCATAAAACTCTTAGGAAGCTGGTTTGGTATGATCTCAAGAGTGAACAAGTTAGTTATGTTGAAGGAATTCTAATTTTTGAAGAAGCCATGTTTTATGTTGGAAGTCTTGTATCACCTTTCTTCCCTGTTGATAATTGTAAGAAGGAGAATCCTACAAGCAAAAACAAGAGAAGGGACGACTTCTTGTCCCGAGGATTTAAACTGAAATTGTAA

Protein sequence

>MsG0280007434.01.T01

MRASSDESVDRREREREETRNNRTLPLIGSCNGLLALSDGEVVFKHPYGLLETTIWNPNTRKQFIIPFIPLPIPDIEGSDNPDRGSICVHGFGFDPLTADYKLLRITWLFARQNIFYDSHVSLFSLKTNSWKTIPSMPYALQYVQAMGVFVQNSLHWVMAKKLDGSHPWLIVAFNLTLEIFNVVPLPVELEGEEVNSNSNGSFKICVAVLGECLCMTVKYETTKIDVWGDEQYGSRDSWCKLFTLVESCFNSPLDFLRPLCYSSDGGKVLLEANPNLHKTLRKLVWYDLKSEQVSYVEGILIFEEAMFYVGSLVSPFFPVDNCKKENPTSKNKRRDDFLSRGFKLKL*