AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257130 MtrunA17_Chr4g0055751 98.723 235 3 0 1 235 1 235 1.66e-177 486
Msa1257130 MtrunA17_Chr1g0189421 27.542 236 149 7 12 235 3 228 1.45e-18 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257130 AT4G17510.1 73.504 234 59 2 1 231 1 234 1.22e-128 363
Msa1257130 AT5G16310.1 27.160 243 147 7 12 235 3 234 3.85e-18 82.4
Msa1257130 AT1G65650.1 27.966 236 148 7 12 235 3 228 5.69e-18 81.6

Find 56 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGAGTTGCAGTTCCTTTC+TGG 0.062664 8_2:-57549140 Msa1257130:intron
GGATATTAAGGCAGTCATTT+TGG 0.176558 8_2:-57545475 Msa1257130:exon
TTGCAGTTCCTTTCTGGTCT+TGG 0.252161 8_2:-57549134 Msa1257130:intron
TGGATTAGATGATGAGCTTT+TGG 0.291265 8_2:-57549075 Msa1257130:CDS
CTTCAAATCCACTGCAAACT+TGG 0.297842 8_2:-57548270 Msa1257130:CDS
AAATCCAGTGATGGATATTA+AGG 0.333908 8_2:-57545487 Msa1257130:exon
CTTCCAAATCTTCCAAAAGA+TGG 0.341663 8_2:-57550379 Msa1257130:CDS
ATAACTTCTGAAATCAAGTT+TGG 0.345654 8_2:-57548598 Msa1257130:intron
CTGTGTTGTGTTGATCTTAA+CGG 0.366120 8_2:+57550524 None:intergenic
GAGGATGGACCATGGGATAT+TGG 0.371748 8_2:+57545843 None:intergenic
ATTGTGTTTCTCCTCGTGAT+TGG 0.374507 8_2:+57545228 None:intergenic
ACATTGAAGTTCAGAGAATC+TGG 0.378322 8_2:+57545526 None:intergenic
TTCAAGAGGAAGCCATCTTT+TGG 0.380122 8_2:+57550367 None:intergenic
GGTAATGCTTGTGGTACAAT+AGG 0.400280 8_2:-57548643 Msa1257130:CDS
CTCACCAAGTACTTTGTTGA+AGG 0.411668 8_2:-57545823 Msa1257130:intron
GAAACCTGGTTCATGACATC+AGG 0.416814 8_2:+57550338 None:intergenic
TGTGTTGTGTTGATCTTAAC+GGG 0.418880 8_2:+57550525 None:intergenic
ATCTGCTATGCTTGTGTGGA+TGG 0.429690 8_2:-57546323 Msa1257130:intron
ATAGGGCTTCTTCATGCTCT+TGG 0.430200 8_2:-57548625 Msa1257130:CDS
GGTGAACTTTATGAGCTTGA+TGG 0.437774 8_2:-57545879 Msa1257130:CDS
AGCACGGCAAGAACAGGCTT+TGG 0.440185 8_2:+57549044 None:intergenic
AGCAAAGAATCATCGCATAA+TGG 0.444748 8_2:-57550411 Msa1257130:exon
GATCCTTCTGAATCATGCTC+TGG 0.458662 8_2:+57545548 None:intergenic
TAGGAACACGTAACCTGCAT+TGG 0.466809 8_2:+57548245 None:intergenic
TTTACCTTCAACAAAGTACT+TGG 0.470505 8_2:+57545819 None:intergenic
CATTCTGTAGCAGCCACTGC+TGG 0.488876 8_2:-57548070 Msa1257130:CDS
CATTGGGTCCAAGTTTGCAG+TGG 0.496798 8_2:+57548262 None:intergenic
CTTCTGAATCATGCTCTGGA+TGG 0.507581 8_2:+57545552 None:intergenic
AACAAAGTACTTGGTGAGGA+TGG 0.517479 8_2:+57545828 None:intergenic
AGGAACACGTAACCTGCATT+GGG 0.535845 8_2:+57548246 None:intergenic
GCAGAGTGCCATGATGTGTA+TGG 0.538795 8_2:-57549095 Msa1257130:CDS
TTTCATCTGCTATGCTTGTG+TGG 0.539159 8_2:-57546327 Msa1257130:CDS
CATCTAATCCATACACATCA+TGG 0.542114 8_2:+57549087 None:intergenic
TCTATATCCCCTTACCGCCA+AGG 0.546014 8_2:-57549018 Msa1257130:intron
TGCAAACTTGGACCCAATGC+AGG 0.547754 8_2:-57548258 Msa1257130:intron
GTAATGCTTGTGGTACAATA+GGG 0.556679 8_2:-57548642 Msa1257130:CDS
AAAATAACCTTGGCGGTAAG+GGG 0.563148 8_2:+57549011 None:intergenic
ACTGCCTTAATATCCATCAC+TGG 0.567942 8_2:+57545483 None:intergenic
CTTGAAGACCAAGACCAGAA+AGG 0.586317 8_2:+57549126 None:intergenic
GTTATCAGTCTGAAGAAGAG+AGG 0.587141 8_2:-57548886 Msa1257130:intron
TGAGCTTGATGGAAGAAAGT+CGG 0.593082 8_2:-57545868 Msa1257130:CDS
TACCTCTGTATCACCAGCAG+TGG 0.593658 8_2:+57548057 None:intergenic
CGAGAATGACACAGAGATGG+AGG 0.595559 8_2:-57548098 Msa1257130:CDS
CATCCAGAGCATGATTCAGA+AGG 0.605086 8_2:-57545551 Msa1257130:CDS
TCTCGAGAATGACACAGAGA+TGG 0.611926 8_2:-57548101 Msa1257130:CDS
ACTTGGTGAGGATGGACCAT+GGG 0.613963 8_2:+57545836 None:intergenic
TAACCCTGATGTCATGAACC+AGG 0.619777 8_2:-57550342 Msa1257130:intron
CTTCAACAAAGTACTTGGTG+AGG 0.623693 8_2:+57545824 None:intergenic
ACATCAGGGTTAGCTTCAAG+AGG 0.625728 8_2:+57550353 None:intergenic
ATATCAAAGAAATCCAGTGA+TGG 0.629924 8_2:-57545496 Msa1257130:CDS
AAACCTGGTTCATGACATCA+GGG 0.636237 8_2:+57550339 None:intergenic
TACTTGGTGAGGATGGACCA+TGG 0.642074 8_2:+57545835 None:intergenic
AAGTCGGCACCAATATCCCA+TGG 0.660482 8_2:-57545852 Msa1257130:CDS
AGCCACTGCTGGTGATACAG+AGG 0.668163 8_2:-57548059 Msa1257130:intron
CAAACTGTGGGTAATGCTTG+TGG 0.677257 8_2:-57548652 Msa1257130:CDS
CTTTATCAAAGCCAATCACG+AGG 0.691198 8_2:-57545239 Msa1257130:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTTAATAATTATATGTA+TGG + chr8_2:57545527-57545546 None:intergenic 10.0%
!! CAAAAAAAAAAAAAACTATA+GGG + chr8_2:57546584-57546603 None:intergenic 10.0%
!! TCAAAAAAAAAAAAAACTAT+AGG + chr8_2:57546585-57546604 None:intergenic 10.0%
!! AGATAAAAAAAAACTATAAA+CGG + chr8_2:57546851-57546870 None:intergenic 10.0%
!!! TTTTTTTTTATCTGATTTTA+TGG - chr8_2:57546858-57546877 Msa1257130:intron 10.0%
!!! TTTTTTTTATCTGATTTTAT+GGG - chr8_2:57546859-57546878 Msa1257130:intron 10.0%
!!! TTTATTTTTTCCAAAAAAAT+TGG - chr8_2:57548934-57548953 Msa1257130:intron 10.0%
!!! TATATATTTAAATTTTCTGT+AGG - chr8_2:57550190-57550209 Msa1257130:intron 10.0%
!!! GTATTAAAAAAGTATCAAAT+TGG - chr8_2:57545723-57545742 Msa1257130:intron 15.0%
!!! CAAAACATTTTATTTTGAAA+AGG - chr8_2:57546107-57546126 Msa1257130:intron 15.0%
!! TTTATATGAAAAAATAACCT+TGG + chr8_2:57546779-57546798 None:intergenic 15.0%
!! TAGCATATTTCATATATAAT+TGG - chr8_2:57547021-57547040 Msa1257130:intron 15.0%
!!! AATTACATATCATTTAGTTT+AGG - chr8_2:57547248-57547267 Msa1257130:intron 15.0%
!! TAGATATAACTAATGATAAA+AGG - chr8_2:57547816-57547835 Msa1257130:intron 15.0%
!!! CTTTATTTTTGTTTTCATTT+TGG + chr8_2:57549340-57549359 None:intergenic 15.0%
!! GTAAATATCTTAAAATGTTA+AGG - chr8_2:57549976-57549995 Msa1257130:intron 15.0%
!!! TTTTTCGAAATTTGTTGTAT+GGG + chr8_2:57545566-57545585 None:intergenic 20.0%
!! CATGTTCTAATCTTAAAAAT+TGG - chr8_2:57545694-57545713 Msa1257130:intron 20.0%
!!! TTGATACTTTTTTAATACCA+GGG + chr8_2:57545721-57545740 None:intergenic 20.0%
!!! TTTGATACTTTTTTAATACC+AGG + chr8_2:57545722-57545741 None:intergenic 20.0%
!!! TGGTTTCTATTTTATGTTAA+CGG - chr8_2:57546033-57546052 Msa1257130:intron 20.0%
!!! ACATTTTATTTTGAAAAGGA+AGG - chr8_2:57546111-57546130 Msa1257130:intron 20.0%
!!! TGCTAACTTCTATTTTTTAA+TGG + chr8_2:57546546-57546565 None:intergenic 20.0%
!! AATAAACAAATACACAGATA+AGG + chr8_2:57546818-57546837 None:intergenic 20.0%
!! TACAAAATATTGTGATATAG+CGG - chr8_2:57547355-57547374 Msa1257130:intron 20.0%
!! GAAATATAAGAAAGAAATAG+AGG + chr8_2:57547567-57547586 None:intergenic 20.0%
!!! TTGACTAAATTTAACTTTTG+AGG - chr8_2:57547750-57547769 Msa1257130:intron 20.0%
!! ACATAAACTACATTCTATAA+AGG + chr8_2:57548002-57548021 None:intergenic 20.0%
!! AGAATGTAGTTTATGTTTAT+AGG - chr8_2:57548006-57548025 Msa1257130:intron 20.0%
!! AAGTTCAAATTTAGTCTAAA+GGG + chr8_2:57548078-57548097 None:intergenic 20.0%
!! TAAGTTCAAATTTAGTCTAA+AGG + chr8_2:57548079-57548098 None:intergenic 20.0%
!!! TTTTTTCCAAAAAAATTGGT+TGG - chr8_2:57548938-57548957 Msa1257130:intron 20.0%
!!! ATTTTTGTTTTCATTTTGGT+TGG + chr8_2:57549336-57549355 None:intergenic 20.0%
!! AAAGACATGTGTTTAATAAA+AGG - chr8_2:57550019-57550038 Msa1257130:intron 20.0%
! ATTGAAATGAAGGATGAAAA+GGG + chr8_2:57545468-57545487 None:intergenic 25.0%
! AATGAAGAAGATTGAAATGA+AGG + chr8_2:57545478-57545497 None:intergenic 25.0%
!!! CTTTTTCGAAATTTGTTGTA+TGG + chr8_2:57545567-57545586 None:intergenic 25.0%
! GATATACAGAAAACATAATC+AGG - chr8_2:57545866-57545885 Msa1257130:CDS 25.0%
! TCAGGACATATCAATTTAAA+AGG - chr8_2:57545884-57545903 Msa1257130:intron 25.0%
!! GGTTTCTATTTTATGTTAAC+GGG - chr8_2:57546034-57546053 Msa1257130:intron 25.0%
!! GTTTCTATTTTATGTTAACG+GGG - chr8_2:57546035-57546054 Msa1257130:intron 25.0%
! TGGACAGAAAAAAAATATTG+TGG - chr8_2:57546299-57546318 Msa1257130:intron 25.0%
! ATTGATGTTTATGTTTGTTC+AGG - chr8_2:57546435-57546454 Msa1257130:intron 25.0%
! CAGAAAAGAAAACAACTATA+GGG + chr8_2:57546619-57546638 None:intergenic 25.0%
! ACAGAAAAGAAAACAACTAT+AGG + chr8_2:57546620-57546639 None:intergenic 25.0%
! ATATGAAAAAATAACCTTGG+CGG + chr8_2:57546776-57546795 None:intergenic 25.0%
! TGCAACAGAATAATGAAAAA+AGG - chr8_2:57546915-57546934 Msa1257130:intron 25.0%
! GCAACAGAATAATGAAAAAA+GGG - chr8_2:57546916-57546935 Msa1257130:intron 25.0%
!! TGAATTTTGTCTATGAAATC+TGG - chr8_2:57546997-57547016 Msa1257130:intron 25.0%
!! GAATTTTGTCTATGAAATCT+GGG - chr8_2:57546998-57547017 Msa1257130:intron 25.0%
! TACATGAAAATCCTATTCAA+GGG + chr8_2:57547061-57547080 None:intergenic 25.0%
! ATACATGAAAATCCTATTCA+AGG + chr8_2:57547062-57547081 None:intergenic 25.0%
!! AGGATTTTCATGTATTTTTC+TGG - chr8_2:57547067-57547086 Msa1257130:intron 25.0%
!! ATATTTTATGAAGCAAACTG+TGG - chr8_2:57547112-57547131 Msa1257130:intron 25.0%
!! TATTTTATGAAGCAAACTGT+GGG - chr8_2:57547113-57547132 Msa1257130:intron 25.0%
!!! ATAACTTCTGAAATCAAGTT+TGG - chr8_2:57547179-57547198 Msa1257130:intron 25.0%
! CCAAAAAAAAATGAGGTAAT+TGG + chr8_2:57547219-57547238 None:intergenic 25.0%
!!! CCAATTACCTCATTTTTTTT+TGG - chr8_2:57547216-57547235 Msa1257130:intron 25.0%
! ATATAAGAAAGAAATAGAGG+AGG + chr8_2:57547564-57547583 None:intergenic 25.0%
!!! TGATAAAAGGTTCTTTTTTG+TGG - chr8_2:57547829-57547848 Msa1257130:intron 25.0%
!!! AGCAAGATTTTTTTATGCAT+AGG + chr8_2:57547875-57547894 None:intergenic 25.0%
! GTTACATACAACAAAATTTG+AGG + chr8_2:57548103-57548122 None:intergenic 25.0%
!! TCTGAAAAGTTACATTTTCA+GGG - chr8_2:57548143-57548162 Msa1257130:intron 25.0%
! TTAATCACAGGAAAAATTAG+AGG + chr8_2:57548545-57548564 None:intergenic 25.0%
! CAAAGTAATTATTTGAGTCT+CGG + chr8_2:57548596-57548615 None:intergenic 25.0%
! ATTTCTCTTTGATAAAGTTG+AGG + chr8_2:57549006-57549025 None:intergenic 25.0%
! AAGAGAAATTGAATACTTGT+TGG - chr8_2:57549017-57549036 Msa1257130:intron 25.0%
!! TTTTTGTAATTGCAACTTTC+TGG - chr8_2:57549177-57549196 Msa1257130:intron 25.0%
!! TTTTGTAATTGCAACTTTCT+GGG - chr8_2:57549178-57549197 Msa1257130:intron 25.0%
!!! TTGTTTTTTTTATCCTGAAG+AGG - chr8_2:57549218-57549237 Msa1257130:intron 25.0%
! CAGAGAATAAAATGTTATTG+AGG + chr8_2:57549497-57549516 None:intergenic 25.0%
!! CAATAACATTTTATTCTCTG+TGG - chr8_2:57549497-57549516 Msa1257130:intron 25.0%
! ATAGAGCTAAACAATATATC+AGG - chr8_2:57549529-57549548 Msa1257130:intron 25.0%
! AGCCTATATCAAAACAAATT+TGG - chr8_2:57549614-57549633 Msa1257130:intron 25.0%
!!! AGCCAAATTTGTTTTGATAT+AGG + chr8_2:57549619-57549638 None:intergenic 25.0%
! GAAATTAATCAGACAAACAT+AGG + chr8_2:57549855-57549874 None:intergenic 25.0%
! TTATTAAACACATGTCTTTC+AGG + chr8_2:57550018-57550037 None:intergenic 25.0%
! ATAACTTTCCTACAGAATTA+TGG + chr8_2:57550150-57550169 None:intergenic 25.0%
GATTGAAATGAAGGATGAAA+AGG + chr8_2:57545469-57545488 None:intergenic 30.0%
! AGACCGTCTTAAAACATTTT+GGG - chr8_2:57545669-57545688 Msa1257130:intron 30.0%
!!! GTTCCCAAAATGTTTTAAGA+CGG + chr8_2:57545675-57545694 None:intergenic 30.0%
TAATCTTAAAAATTGGTCCC+TGG - chr8_2:57545701-57545720 Msa1257130:intron 30.0%
! CAATATTTTCCCTGTAAATG+TGG + chr8_2:57546063-57546082 None:intergenic 30.0%
!! TATTTTGAAAAGGAAGGTGT+TGG - chr8_2:57546117-57546136 Msa1257130:intron 30.0%
GTCAAAATTAGTCCTTTGAA+TGG + chr8_2:57546219-57546238 None:intergenic 30.0%
!!! CCAGTTACAGATCAATTTTT+TGG + chr8_2:57546282-57546301 None:intergenic 30.0%
CCAAAAAATTGATCTGTAAC+TGG - chr8_2:57546279-57546298 Msa1257130:intron 30.0%
!! TTAGGTTCTAGATATTGGTT+TGG - chr8_2:57546378-57546397 Msa1257130:intron 30.0%
!! GAGTGTTTCTTTTAAGTGTA+TGG - chr8_2:57546469-57546488 Msa1257130:intron 30.0%
AACAAATACACAGATAAGGA+GGG + chr8_2:57546814-57546833 None:intergenic 30.0%
AAACAAATACACAGATAAGG+AGG + chr8_2:57546815-57546834 None:intergenic 30.0%
TTAAGATGAAACCCTTGAAT+AGG - chr8_2:57547047-57547066 Msa1257130:intron 30.0%
!! TTCATGTATTTTTCTGGTGT+AGG - chr8_2:57547073-57547092 Msa1257130:intron 30.0%
TGATGCACCAAAAAAAAATG+AGG + chr8_2:57547226-57547245 None:intergenic 30.0%
!!! TAAAAGGTTCTTTTTTGTGG+TGG - chr8_2:57547832-57547851 Msa1257130:intron 30.0%
!! CTCTGAAAAGTTACATTTTC+AGG - chr8_2:57548142-57548161 Msa1257130:intron 30.0%
AATTTCTTAAGTCATGGTTG+CGG + chr8_2:57548309-57548328 None:intergenic 30.0%
TTTGGGAATTTCTTAAGTCA+TGG + chr8_2:57548315-57548334 None:intergenic 30.0%
TCTGCATTAGATGAAGAAAT+GGG + chr8_2:57548432-57548451 None:intergenic 30.0%
TTCTGCATTAGATGAAGAAA+TGG + chr8_2:57548433-57548452 None:intergenic 30.0%
! AAAATTAGAGGAAAGGCATA+AGG + chr8_2:57548533-57548552 None:intergenic 30.0%
AGTGTTTAAGCATTAATCAC+AGG + chr8_2:57548557-57548576 None:intergenic 30.0%
AAATCACAAGACTAAGACTA+TGG + chr8_2:57548806-57548825 None:intergenic 30.0%
TTTCCAAAAAAATTGGTTGG+TGG - chr8_2:57548941-57548960 Msa1257130:intron 30.0%
!!! ATTCCACCAACCAATTTTTT+TGG + chr8_2:57548947-57548966 None:intergenic 30.0%
!! ACTTGTTGGTTAGTGAATTT+TGG - chr8_2:57549031-57549050 Msa1257130:CDS 30.0%
!! CTTGTTGGTTAGTGAATTTT+GGG - chr8_2:57549032-57549051 Msa1257130:CDS 30.0%
AGACCATGTGTTAATATACT+TGG - chr8_2:57549061-57549080 Msa1257130:CDS 30.0%
TCACCAAGTATATTAACACA+TGG + chr8_2:57549067-57549086 None:intergenic 30.0%
AAACATTGTCAATACACGAA+AGG + chr8_2:57549384-57549403 None:intergenic 30.0%
! GTTTGAAATATTTGTGATGC+AGG - chr8_2:57549405-57549424 Msa1257130:intron 30.0%
!! GTAAGAAACCTCTAAAACAT+AGG - chr8_2:57549577-57549596 Msa1257130:intron 30.0%
!!! AATTAGTTTTGGACATGTAC+AGG + chr8_2:57549642-57549661 None:intergenic 30.0%
!! GAAGAGCTCATAATTAGTTT+TGG + chr8_2:57549653-57549672 None:intergenic 30.0%
! TTTACCTTCAACAAAGTACT+TGG + chr8_2:57549961-57549980 None:intergenic 30.0%
ATATCAAAGAAATCCAGTGA+TGG - chr8_2:57550281-57550300 Msa1257130:intron 30.0%
!! AAATCCAGTGATGGATATTA+AGG - chr8_2:57550290-57550309 Msa1257130:intron 30.0%
!! GATATTAAGGCAGTCATTTT+GGG - chr8_2:57550303-57550322 Msa1257130:intron 30.0%
!! GCATCAAATTTTAATCGAAG+TGG + chr8_2:57550470-57550489 None:intergenic 30.0%
! CTTTTCGCAGTTATTCTAAC+TGG - chr8_2:57545229-57545248 Msa1257130:three_prime_UTR 35.0%
! TGTGTTGTGTTGATCTTAAC+GGG + chr8_2:57545255-57545274 None:intergenic 35.0%
! CTGTGTTGTGTTGATCTTAA+CGG + chr8_2:57545256-57545275 None:intergenic 35.0%
AGCAAAGAATCATCGCATAA+TGG - chr8_2:57545366-57545385 Msa1257130:three_prime_UTR 35.0%
!! CTTTTGGAAGATTTGGAAGA+AGG + chr8_2:57545397-57545416 None:intergenic 35.0%
CTTCCAAATCTTCCAAAAGA+TGG - chr8_2:57545398-57545417 Msa1257130:three_prime_UTR 35.0%
!! AAGCCATCTTTTGGAAGATT+TGG + chr8_2:57545404-57545423 None:intergenic 35.0%
!!! CAAAATGTTTTAAGACGGTC+TGG + chr8_2:57545670-57545689 None:intergenic 35.0%
! CAGACCGTCTTAAAACATTT+TGG - chr8_2:57545668-57545687 Msa1257130:intron 35.0%
TTGATTATGCCACCGTATTA+GGG + chr8_2:57545752-57545771 None:intergenic 35.0%
ATTGATTATGCCACCGTATT+AGG + chr8_2:57545753-57545772 None:intergenic 35.0%
ATTGCACACTATGTGTTTGT+TGG - chr8_2:57546079-57546098 Msa1257130:intron 35.0%
GGTGGAAGATAATATTTACG+CGG - chr8_2:57546138-57546157 Msa1257130:intron 35.0%
GTGGAAGATAATATTTACGC+GGG - chr8_2:57546139-57546158 Msa1257130:intron 35.0%
TTCATCTGTCTTCCATTCAA+AGG - chr8_2:57546204-57546223 Msa1257130:intron 35.0%
!!! ATCAATTTTTTGGCTACTGC+AGG + chr8_2:57546272-57546291 None:intergenic 35.0%
!! ATACCCTTAAGTTGGTTGTT+AGG - chr8_2:57546360-57546379 Msa1257130:intron 35.0%
GAACCTAACAACCAACTTAA+GGG + chr8_2:57546366-57546385 None:intergenic 35.0%
AGAACCTAACAACCAACTTA+AGG + chr8_2:57546367-57546386 None:intergenic 35.0%
!! GGTTGTTAGGTTCTAGATAT+TGG - chr8_2:57546373-57546392 Msa1257130:intron 35.0%
AGAGTGACTAAGATCCAAAT+TGG + chr8_2:57546409-57546428 None:intergenic 35.0%
CATCTAATCCATACACATCA+TGG + chr8_2:57546693-57546712 None:intergenic 35.0%
!! TGGATTAGATGATGAGCTTT+TGG - chr8_2:57546702-57546721 Msa1257130:intron 35.0%
!! AGATGATGAGCTTTTGGAAA+TGG - chr8_2:57546708-57546727 Msa1257130:intron 35.0%
AAGGGGATATAGAAAAAGCA+CGG + chr8_2:57546752-57546771 None:intergenic 35.0%
AAAAATAACCTTGGCGGTAA+GGG + chr8_2:57546770-57546789 None:intergenic 35.0%
AAAAAATAACCTTGGCGGTA+AGG + chr8_2:57546771-57546790 None:intergenic 35.0%
GTAATGCTTGTGGTACAATA+GGG - chr8_2:57547135-57547154 Msa1257130:intron 35.0%
! AGGTCAGTGTTGTTAAATAG+CGG - chr8_2:57547268-57547287 Msa1257130:intron 35.0%
AATTGCAGATCGCGAAAAAA+TGG + chr8_2:57547429-57547448 None:intergenic 35.0%
!!! GTTGCTTTTGTTATCAGTTG+AGG - chr8_2:57547465-57547484 Msa1257130:intron 35.0%
GAAAGAAATAGAGGAGGTTT+GGG + chr8_2:57547558-57547577 None:intergenic 35.0%
AGAAAGAAATAGAGGAGGTT+TGG + chr8_2:57547559-57547578 None:intergenic 35.0%
GTTTATAGGTCCTTGTATGA+TGG - chr8_2:57548020-57548039 Msa1257130:intron 35.0%
TGATGGCTGATGAGTAATTA+TGG - chr8_2:57548037-57548056 Msa1257130:intron 35.0%
! GATGAGTAATTATGGTGTTG+TGG - chr8_2:57548045-57548064 Msa1257130:intron 35.0%
GAGATAACAGAGAGAAGATT+GGG + chr8_2:57548191-57548210 None:intergenic 35.0%
GAAAACAGCAAAACACAATC+TGG - chr8_2:57548450-57548469 Msa1257130:intron 35.0%
TCTGAACTCACTATGAGTAT+TGG - chr8_2:57548490-57548509 Msa1257130:intron 35.0%
CACAGGAAAAATTAGAGGAA+AGG + chr8_2:57548540-57548559 None:intergenic 35.0%
! GATAAAGCTTGGTTGTTGTT+GGG + chr8_2:57548747-57548766 None:intergenic 35.0%
AATTAAGAGTAGCAGAGATG+AGG + chr8_2:57548916-57548935 None:intergenic 35.0%
!! TTGGTTAGTGAATTTTGGGT+GGG - chr8_2:57549036-57549055 Msa1257130:CDS 35.0%
TAAGTAGGTAACCAAAAGTG+TGG + chr8_2:57549114-57549133 None:intergenic 35.0%
AGCATTTAACAACACTGCAT+AGG + chr8_2:57549694-57549713 None:intergenic 35.0%
! TATGCAGTGTTGTTAAATGC+TGG - chr8_2:57549693-57549712 Msa1257130:intron 35.0%
GTTGCAATGTTATTGTATGC+AGG - chr8_2:57549877-57549896 Msa1257130:intron 35.0%
GTCAATGACCATAATTCTGT+AGG - chr8_2:57550139-57550158 Msa1257130:intron 35.0%
ACATTGAAGTTCAGAGAATC+TGG + chr8_2:57550254-57550273 None:intergenic 35.0%
! GGATATTAAGGCAGTCATTT+TGG - chr8_2:57550302-57550321 Msa1257130:intron 35.0%
!! CAGTCATTTTGGGCTTTTTA+GGG - chr8_2:57550313-57550332 Msa1257130:intron 35.0%
TAAAAAGCAGCATGAATGCT+TGG + chr8_2:57550388-57550407 None:intergenic 35.0%
! TTCAAGAGGAAGCCATCTTT+TGG + chr8_2:57545413-57545432 None:intergenic 40.0%
AAACCTGGTTCATGACATCA+GGG + chr8_2:57545441-57545460 None:intergenic 40.0%
GATGAAAAGGGATAGAAACC+TGG + chr8_2:57545456-57545475 None:intergenic 40.0%
!!! AATGTTTTAAGACGGTCTGG+TGG + chr8_2:57545667-57545686 None:intergenic 40.0%
TGATTATGCCACCGTATTAG+GGG + chr8_2:57545751-57545770 None:intergenic 40.0%
TTAAAAGGCCCCTAATCTTG+AGG - chr8_2:57545899-57545918 Msa1257130:intron 40.0%
!! TTTGAAAAGGAAGGTGTTGG+TGG - chr8_2:57546120-57546139 Msa1257130:intron 40.0%
AATGGAAGACAGATGAAAGC+TGG + chr8_2:57546201-57546220 None:intergenic 40.0%
!! TTGGTTTGGTCATGCCAATT+TGG - chr8_2:57546392-57546411 Msa1257130:intron 40.0%
AAAATAACCTTGGCGGTAAG+GGG + chr8_2:57546769-57546788 None:intergenic 40.0%
GTTATCAGTCTGAAGAAGAG+AGG - chr8_2:57546891-57546910 Msa1257130:intron 40.0%
GGTAATGCTTGTGGTACAAT+AGG - chr8_2:57547134-57547153 Msa1257130:intron 40.0%
GCTATAGCGTTATTGCATAG+CGG - chr8_2:57547292-57547311 Msa1257130:intron 40.0%
CTTCAAATCCACTGCAAACT+TGG - chr8_2:57547507-57547526 Msa1257130:intron 40.0%
TACTCATCAGCCATCATACA+AGG + chr8_2:57548033-57548052 None:intergenic 40.0%
CGAGATAACAGAGAGAAGAT+TGG + chr8_2:57548192-57548211 None:intergenic 40.0%
CTGTGCTAAACTAGACTAGA+GGG + chr8_2:57548342-57548361 None:intergenic 40.0%
ACTGTGCTAAACTAGACTAG+AGG + chr8_2:57548343-57548362 None:intergenic 40.0%
TGCTAGATTGGGAGATCATT+GGG + chr8_2:57548381-57548400 None:intergenic 40.0%
ATGAAGAAATGGGAGGACTT+AGG + chr8_2:57548422-57548441 None:intergenic 40.0%
GCATTAGATGAAGAAATGGG+AGG + chr8_2:57548429-57548448 None:intergenic 40.0%
GGATAAAGCTTGGTTGTTGT+TGG + chr8_2:57548748-57548767 None:intergenic 40.0%
TCACTTAGTGGGATAAAGCT+TGG + chr8_2:57548758-57548777 None:intergenic 40.0%
! AAGCTTTATCCCACTAAGTG+AGG - chr8_2:57548757-57548776 Msa1257130:intron 40.0%
TGTAGCTAACCTCACTTAGT+GGG + chr8_2:57548769-57548788 None:intergenic 40.0%
ATGTAGCTAACCTCACTTAG+TGG + chr8_2:57548770-57548789 None:intergenic 40.0%
TGTGGTAAGACTAACGAGAT+TGG + chr8_2:57548878-57548897 None:intergenic 40.0%
! GTTGGTTAGTGAATTTTGGG+TGG - chr8_2:57549035-57549054 Msa1257130:CDS 40.0%
AAAGTGTGGTAGTCTCTTAG+TGG + chr8_2:57549100-57549119 None:intergenic 40.0%
! CTAAGAGACTACCACACTTT+TGG - chr8_2:57549100-57549119 Msa1257130:CDS 40.0%
TTTCATCTGCTATGCTTGTG+TGG - chr8_2:57549450-57549469 Msa1257130:intron 40.0%
!! AGCTAGCTCCTATGTTTTAG+AGG + chr8_2:57549588-57549607 None:intergenic 40.0%
GCACAGCTATAACTGCTATT+TGG + chr8_2:57549764-57549783 None:intergenic 40.0%
TAGCAGTTATAGCTGTGCAA+TGG - chr8_2:57549766-57549785 Msa1257130:intron 40.0%
GGTGAACTTTATGAGCTTGA+TGG - chr8_2:57549898-57549917 Msa1257130:intron 40.0%
TGAGCTTGATGGAAGAAAGT+CGG - chr8_2:57549909-57549928 Msa1257130:intron 40.0%
! AACAAAGTACTTGGTGAGGA+TGG + chr8_2:57549952-57549971 None:intergenic 40.0%
! CTTCAACAAAGTACTTGGTG+AGG + chr8_2:57549956-57549975 None:intergenic 40.0%
CTCACCAAGTACTTTGTTGA+AGG - chr8_2:57549954-57549973 Msa1257130:intron 40.0%
ACCATGATGTTGTTGTCAAG+TGG - chr8_2:57550086-57550105 Msa1257130:intron 40.0%
ACCACTTGACAACAACATCA+TGG + chr8_2:57550090-57550109 None:intergenic 40.0%
! TTGTTGTCAAGTGGTGCTTT+TGG - chr8_2:57550095-57550114 Msa1257130:intron 40.0%
! TGTTGTCAAGTGGTGCTTTT+GGG - chr8_2:57550096-57550115 Msa1257130:intron 40.0%
ACTGCCTTAATATCCATCAC+TGG + chr8_2:57550297-57550316 None:intergenic 40.0%
!! GCAGTCATTTTGGGCTTTTT+AGG - chr8_2:57550312-57550331 Msa1257130:intron 40.0%
CTTTATCAAAGCCAATCACG+AGG - chr8_2:57550538-57550557 Msa1257130:five_prime_UTR 40.0%
ATTGTGTTTCTCCTCGTGAT+TGG + chr8_2:57550552-57550571 None:intergenic 40.0%
!! ACATCAGGGTTAGCTTCAAG+AGG + chr8_2:57545427-57545446 None:intergenic 45.0%
TAACCCTGATGTCATGAACC+AGG - chr8_2:57545435-57545454 Msa1257130:three_prime_UTR 45.0%
GAAACCTGGTTCATGACATC+AGG + chr8_2:57545442-57545461 None:intergenic 45.0%
TCAAATTGGCCCCCCTAATA+CGG - chr8_2:57545737-57545756 Msa1257130:intron 45.0%
ATTATGCCACCGTATTAGGG+GGG + chr8_2:57545749-57545768 None:intergenic 45.0%
GATTATGCCACCGTATTAGG+GGG + chr8_2:57545750-57545769 None:intergenic 45.0%
AACACAGGGCCTCAAGATTA+GGG + chr8_2:57545911-57545930 None:intergenic 45.0%
TAACACAGGGCCTCAAGATT+AGG + chr8_2:57545912-57545931 None:intergenic 45.0%
AATCTTGAGGCCCTGTGTTA+AGG - chr8_2:57545912-57545931 Msa1257130:intron 45.0%
ATCTTGAGGCCCTGTGTTAA+GGG - chr8_2:57545913-57545932 Msa1257130:intron 45.0%
TAACGGGGTTCCACATTTAC+AGG - chr8_2:57546050-57546069 Msa1257130:intron 45.0%
AACGGGGTTCCACATTTACA+GGG - chr8_2:57546051-57546070 Msa1257130:intron 45.0%
ATATTTACGCGGGTTCCACT+TGG - chr8_2:57546149-57546168 Msa1257130:intron 45.0%
AATGTGGTAGCAGTACCAAG+TGG + chr8_2:57546167-57546186 None:intergenic 45.0%
AAGACAGATGAAAGCTGGAG+GGG + chr8_2:57546196-57546215 None:intergenic 45.0%
GAAGACAGATGAAAGCTGGA+GGG + chr8_2:57546197-57546216 None:intergenic 45.0%
AGGCGCACTTTGACTATCAA+AGG + chr8_2:57546252-57546271 None:intergenic 45.0%
TCATTGTAGTCATTCGCCGT+GGG - chr8_2:57546331-57546350 Msa1257130:CDS 45.0%
!! TTAAGGGTATCTTCCACCCA+CGG + chr8_2:57546350-57546369 None:intergenic 45.0%
GGTGGAAGATACCCTTAAGT+TGG - chr8_2:57546352-57546371 Msa1257130:CDS 45.0%
TGTGAGTTGCAGTTCCTTTC+TGG - chr8_2:57546637-57546656 Msa1257130:intron 45.0%
! TTGCAGTTCCTTTCTGGTCT+TGG - chr8_2:57546643-57546662 Msa1257130:intron 45.0%
CTTGAAGACCAAGACCAGAA+AGG + chr8_2:57546654-57546673 None:intergenic 45.0%
! AGAAAAAGCACGGCAAGAAC+AGG + chr8_2:57546742-57546761 None:intergenic 45.0%
CAAACTGTGGGTAATGCTTG+TGG - chr8_2:57547125-57547144 Msa1257130:intron 45.0%
ATAGGGCTTCTTCATGCTCT+TGG - chr8_2:57547152-57547171 Msa1257130:intron 45.0%
TGTACTATACTGCGTATCGC+AGG + chr8_2:57547339-57547358 None:intergenic 45.0%
TGCAGATCGCGAAAAAATGG+CGG + chr8_2:57547426-57547445 None:intergenic 45.0%
CGATCTGCAATTGACAACAC+TGG - chr8_2:57547437-57547456 Msa1257130:intron 45.0%
AGGAACACGTAACCTGCATT+GGG + chr8_2:57547534-57547553 None:intergenic 45.0%
TAGGAACACGTAACCTGCAT+TGG + chr8_2:57547535-57547554 None:intergenic 45.0%
GAAATAGAGGAGGTTTGGGT+AGG + chr8_2:57547554-57547573 None:intergenic 45.0%
TCTCGAGAATGACACAGAGA+TGG - chr8_2:57547676-57547695 Msa1257130:intron 45.0%
GAAGATTGGGTCTAATGACG+TGG + chr8_2:57548178-57548197 None:intergenic 45.0%
! TGGCGACTATAGTGTTGAAC+TGG + chr8_2:57548228-57548247 None:intergenic 45.0%
TGCTAAACTAGACTAGAGGG+TGG + chr8_2:57548339-57548358 None:intergenic 45.0%
TCATTGGGAGTCATGAGGTA+TGG + chr8_2:57548366-57548385 None:intergenic 45.0%
GTGCTAGATTGGGAGATCAT+TGG + chr8_2:57548382-57548401 None:intergenic 45.0%
TTAGGAAAGGAGGACTGATC+GGG + chr8_2:57548404-57548423 None:intergenic 45.0%
CTTAGGAAAGGAGGACTGAT+CGG + chr8_2:57548405-57548424 None:intergenic 45.0%
GAAATGGGAGGACTTAGGAA+AGG + chr8_2:57548417-57548436 None:intergenic 45.0%
! GAGGAAAGGCATAAGGCTAA+AGG + chr8_2:57548526-57548545 None:intergenic 45.0%
GTCTCGGTCACATTATGCAA+AGG + chr8_2:57548580-57548599 None:intergenic 45.0%
AGGATGTTGTGTTGGATGTG+TGG + chr8_2:57548896-57548915 None:intergenic 45.0%
CAGAGATGAGGATGTTGTGT+TGG + chr8_2:57548904-57548923 None:intergenic 45.0%
TATCTCGGGTCAAGGTAAGT+AGG + chr8_2:57549129-57549148 None:intergenic 45.0%
TACTTACCTTGACCCGAGAT+AGG - chr8_2:57549128-57549147 Msa1257130:CDS 45.0%
TAATCCGTTCCTCCTATCTC+GGG + chr8_2:57549143-57549162 None:intergenic 45.0%
CTAATCCGTTCCTCCTATCT+CGG + chr8_2:57549144-57549163 None:intergenic 45.0%
! CTGCAAAGTTTTGCCTCTTC+AGG + chr8_2:57549234-57549253 None:intergenic 45.0%
ATCTGCTATGCTTGTGTGGA+TGG - chr8_2:57549454-57549473 Msa1257130:intron 45.0%
! CTTCTGAATCATGCTCTGGA+TGG + chr8_2:57550228-57550247 None:intergenic 45.0%
CATCCAGAGCATGATTCAGA+AGG - chr8_2:57550226-57550245 Msa1257130:intron 45.0%
GATCCTTCTGAATCATGCTC+TGG + chr8_2:57550232-57550251 None:intergenic 45.0%
!!! GTTTTAAGACGGTCTGGTGG+CGG + chr8_2:57545664-57545683 None:intergenic 50.0%
ACACAGGGCCTCAAGATTAG+GGG + chr8_2:57545910-57545929 None:intergenic 50.0%
GCATCAAGGCCCTTAACACA+GGG + chr8_2:57545925-57545944 None:intergenic 50.0%
ATCCTCTGCAAGTGGCATCA+AGG + chr8_2:57545939-57545958 None:intergenic 50.0%
! TGATGCCACTTGCAGAGGAT+TGG - chr8_2:57545939-57545958 Msa1257130:intron 50.0%
CCAGACTAGTGGAAGAGATG+TGG + chr8_2:57545972-57545991 None:intergenic 50.0%
CCACATCTCTTCCACTAGTC+TGG - chr8_2:57545969-57545988 Msa1257130:intron 50.0%
CAAACCCCCCACCTCAAAAA+GGG + chr8_2:57546008-57546027 None:intergenic 50.0%
ACAAACCCCCCACCTCAAAA+AGG + chr8_2:57546009-57546028 None:intergenic 50.0%
GGAAGACAGATGAAAGCTGG+AGG + chr8_2:57546198-57546217 None:intergenic 50.0%
CACGGCGAATGACTACAATG+AGG + chr8_2:57546332-57546351 None:intergenic 50.0%
CTCATTGTAGTCATTCGCCG+TGG - chr8_2:57546330-57546349 Msa1257130:CDS 50.0%
! GCAGAGTGCCATGATGTGTA+TGG - chr8_2:57546682-57546701 Msa1257130:intron 50.0%
TCTATATCCCCTTACCGCCA+AGG - chr8_2:57546759-57546778 Msa1257130:intron 50.0%
CATTGGGTCCAAGTTTGCAG+TGG + chr8_2:57547518-57547537 None:intergenic 50.0%
TGCAAACTTGGACCCAATGC+AGG - chr8_2:57547519-57547538 Msa1257130:intron 50.0%
CGAGAATGACACAGAGATGG+AGG - chr8_2:57547679-57547698 Msa1257130:intron 50.0%
TACCTCTGTATCACCAGCAG+TGG + chr8_2:57547723-57547742 None:intergenic 50.0%
CAACACTATAGTCGCCACGT+TGG - chr8_2:57548231-57548250 Msa1257130:intron 50.0%
! TATAGTCGCCACGTTGGTCT+TGG - chr8_2:57548237-57548256 Msa1257130:intron 50.0%
CAAGAAGACCAAGACCAACG+TGG + chr8_2:57548248-57548267 None:intergenic 50.0%
CTAGACTAGAGGGTGGCTTT+GGG + chr8_2:57548332-57548351 None:intergenic 50.0%
ACTAGACTAGAGGGTGGCTT+TGG + chr8_2:57548333-57548352 None:intergenic 50.0%
GGAGATCATTGGGAGTCATG+AGG + chr8_2:57548371-57548390 None:intergenic 50.0%
GACTGATCGGGTGCTAGATT+GGG + chr8_2:57548392-57548411 None:intergenic 50.0%
ATGGGAGGACTTAGGAAAGG+AGG + chr8_2:57548414-57548433 None:intergenic 50.0%
TTACCTTGACCCGAGATAGG+AGG - chr8_2:57549131-57549150 Msa1257130:CDS 50.0%
TTGACCCGAGATAGGAGGAA+CGG - chr8_2:57549136-57549155 Msa1257130:intron 50.0%
CTGCATAGGCAACTGCAGAA+GGG + chr8_2:57549680-57549699 None:intergenic 50.0%
ACTGCATAGGCAACTGCAGA+AGG + chr8_2:57549681-57549700 None:intergenic 50.0%
AAGTCGGCACCAATATCCCA+TGG - chr8_2:57549925-57549944 Msa1257130:intron 50.0%
GAGGATGGACCATGGGATAT+TGG + chr8_2:57549937-57549956 None:intergenic 50.0%
! ACTTGGTGAGGATGGACCAT+GGG + chr8_2:57549944-57549963 None:intergenic 50.0%
! TACTTGGTGAGGATGGACCA+TGG + chr8_2:57549945-57549964 None:intergenic 50.0%
AATTGGCCCCCCTAATACGG+TGG - chr8_2:57545740-57545759 Msa1257130:intron 55.0%
GGCATCAAGGCCCTTAACAC+AGG + chr8_2:57545926-57545945 None:intergenic 55.0%
CAAGGCCAATCCTCTGCAAG+TGG + chr8_2:57545947-57545966 None:intergenic 55.0%
AGTGGAAGAGATGTGGCGCA+AGG + chr8_2:57545965-57545984 None:intergenic 55.0%
CCTCAAAAAGGGAGGAGGGA+AGG + chr8_2:57545997-57546016 None:intergenic 55.0%
! CCTTCCCTCCTCCCTTTTTG+AGG - chr8_2:57545994-57546013 Msa1257130:intron 55.0%
!! TCCCTCCTCCCTTTTTGAGG+TGG - chr8_2:57545997-57546016 Msa1257130:intron 55.0%
CCCACCTCAAAAAGGGAGGA+GGG + chr8_2:57546001-57546020 None:intergenic 55.0%
!!! CCCTCCTCCCTTTTTGAGGT+GGG - chr8_2:57545998-57546017 Msa1257130:intron 55.0%
!!! CCTCCTCCCTTTTTGAGGTG+GGG - chr8_2:57545999-57546018 Msa1257130:intron 55.0%
!!! CTCCTCCCTTTTTGAGGTGG+GGG - chr8_2:57546000-57546019 Msa1257130:intron 55.0%
!!! TCCTCCCTTTTTGAGGTGGG+GGG - chr8_2:57546001-57546020 Msa1257130:intron 55.0%
GCTGGAGGGGATGCATAATG+TGG + chr8_2:57546183-57546202 None:intergenic 55.0%
TTGTAGTCATTCGCCGTGGG+TGG - chr8_2:57546334-57546353 Msa1257130:CDS 55.0%
AGCACGGCAAGAACAGGCTT+TGG + chr8_2:57546736-57546755 None:intergenic 55.0%
CATTCTGTAGCAGCCACTGC+TGG - chr8_2:57547707-57547726 Msa1257130:intron 55.0%
AGCCACTGCTGGTGATACAG+AGG - chr8_2:57547718-57547737 Msa1257130:intron 55.0%
GGACTGATCGGGTGCTAGAT+TGG + chr8_2:57548393-57548412 None:intergenic 55.0%
GTTCCTCCTATCTCGGGTCA+AGG + chr8_2:57549137-57549156 None:intergenic 55.0%
CATAGGCAACTGCAGAAGGG+AGG + chr8_2:57549677-57549696 None:intergenic 55.0%
!! GCAATGGCACTGATGCTCAG+TGG - chr8_2:57549782-57549801 Msa1257130:intron 55.0%
! GGCCTTGATGCCACTTGCAG+AGG - chr8_2:57545934-57545953 Msa1257130:intron 60.0%
GAGGGAAGGCTCCAGACTAG+TGG + chr8_2:57545983-57546002 None:intergenic 60.0%
CCCCACCTCAAAAAGGGAGG+AGG + chr8_2:57546002-57546021 None:intergenic 60.0%
ACCCCCCACCTCAAAAAGGG+AGG + chr8_2:57546005-57546024 None:intergenic 60.0%
! GAGGTGGGGGGTTTGTTCTC+TGG - chr8_2:57546013-57546032 Msa1257130:intron 60.0%
!! TGGTGGCGGTGCACGAGGGT+CGG + chr8_2:57545650-57545669 None:intergenic 70.0%
!! GGTCTGGTGGCGGTGCACGA+GGG + chr8_2:57545654-57545673 None:intergenic 70.0%
!! CGGTCTGGTGGCGGTGCACG+AGG + chr8_2:57545655-57545674 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 57545212 57550587 57545212 ID=Msa1257130;Name=Msa1257130
chr8_2 mRNA 57545212 57550587 57545212 ID=Msa1257130-mRNA-1;Parent=Msa1257130;Name=Msa1257130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=173|1|1|1|1|1|9|277|235
chr8_2 exon 57545212 57545587 57545212 ID=Msa1257130-mRNA-1:exon:17767;Parent=Msa1257130-mRNA-1
chr8_2 exon 57545824 57545900 57545824 ID=Msa1257130-mRNA-1:exon:17766;Parent=Msa1257130-mRNA-1
chr8_2 exon 57546324 57546372 57546324 ID=Msa1257130-mRNA-1:exon:17765;Parent=Msa1257130-mRNA-1
chr8_2 exon 57548060 57548134 57548060 ID=Msa1257130-mRNA-1:exon:17764;Parent=Msa1257130-mRNA-1
chr8_2 exon 57548259 57548317 57548259 ID=Msa1257130-mRNA-1:exon:17763;Parent=Msa1257130-mRNA-1
chr8_2 exon 57548599 57548704 57548599 ID=Msa1257130-mRNA-1:exon:17762;Parent=Msa1257130-mRNA-1
chr8_2 exon 57548862 57548900 57548862 ID=Msa1257130-mRNA-1:exon:17761;Parent=Msa1257130-mRNA-1
chr8_2 exon 57549019 57549150 57549019 ID=Msa1257130-mRNA-1:exon:17760;Parent=Msa1257130-mRNA-1
chr8_2 exon 57550343 57550587 57550343 ID=Msa1257130-mRNA-1:exon:17759;Parent=Msa1257130-mRNA-1
chr8_2 five_prime_UTR 57550415 57550587 57550415 ID=Msa1257130-mRNA-1:five_prime_utr;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57550343 57550414 57550343 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57549019 57549150 57549019 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57548862 57548900 57548862 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57548599 57548704 57548599 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57548259 57548317 57548259 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57548060 57548134 57548060 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57546324 57546372 57546324 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57545824 57545900 57545824 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 CDS 57545489 57545587 57545489 ID=Msa1257130-mRNA-1:cds;Parent=Msa1257130-mRNA-1
chr8_2 three_prime_UTR 57545212 57545488 57545212 ID=Msa1257130-mRNA-1:three_prime_utr;Parent=Msa1257130-mRNA-1
Gene Sequence

>Msa1257130

ATGGCTACTCCTTCTTCCAAATCTTCCAAAAGATGGCTTCCTCTTGAAGCTAACCCTGATGTCATGAACCAGTTCCTTTCTGGTCTTGGTCTTCAAGAGAATCAAGCAGAGTGCCATGATGTGTATGGATTAGATGATGAGCTTTTGGAAATGGTTCCAAAGCCTGTTCTTGCCGTGCTTTTTCTATATCCCCTTACCGCCAAGTCTGAAGAAGAGAGGTTGCAACAGAATAATGAAAAAAGGGAATATAACAACAAAGTATATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAATAGGGCTTCTTCATGCTCTTGGTAACATAACTTCTGAAATCAAGTTTGTTGAGGAGTCATTCTTTGATAAGTTCTTCAAATCCACTGCAAACTTGGACCCAATGCAGCGTGCTGTATTTCTCGAGAATGACACAGAGATGGAGGTTGCTCATTCTGTAGCAGCCACTGCTGGTGATACAGAGGCAACAGATGATGTCAATACTCATTTCATCTGCTATGCTTGTGTGGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCGGCACCAATATCCCATGGTCCATCCTCACCAAGTACTTTGTTGAAGGATGCTGCTAAAGCCATCCAGAGCATGATTCAGAAGGATCCAGATTCTCTGAACTTCAATGTCATTGCAATATCAAAGAAATCCAGTGATGGATATTAA

Protein sequence

>Msa1257130

MATPSSKSSKRWLPLEANPDVMNQFLSGLGLQENQAECHDVYGLDDELLEMVPKPVLAVLFLYPLTAKSEEERLQQNNEKREYNNKVYFMKQTVGNACGTIGLLHALGNITSEIKFVEESFFDKFFKSTANLDPMQRAVFLENDTEMEVAHSVAATAGDTEATDDVNTHFICYACVDGELYELDGRKSAPISHGPSSPSTLLKDAAKAIQSMIQKDPDSLNFNVIAISKKSSDGY*