AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0624470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624470 MtrunA17_Chr8g0377281 33.152 552 262 17 79 553 1 522 2.34e-68 231
Msa0624470 MtrunA17_Chr5g0429061 30.867 473 254 16 141 603 4 413 1.16e-51 183
Msa0624470 MtrunA17_Chr4g0042681 39.098 133 66 4 472 603 2 120 5.23e-20 87.0
Msa0624470 MtrunA17_Chr4g0042291 34.286 140 85 2 192 331 9 141 1.43e-17 82.0
Msa0624470 MtrunA17_Chr8g0352961 33.099 142 85 5 466 606 171 303 1.78e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0624470 AT1G08300.3 35.200 125 71 2 474 598 489 603 1.23e-15 80.9
Msa0624470 AT1G08300.1 35.833 120 67 2 479 598 586 695 1.26e-15 80.9
Msa0624470 AT1G08300.2 35.200 125 71 2 474 598 527 641 1.37e-15 80.9
Msa0624470 AT4G13750.1 34.646 127 69 3 474 598 2600 2714 2.05e-13 74.3

Find 150 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACTAAAACCGGATTTA+TGG 0.127288 4_3:-2387276 Msa0624470:CDS
CTGGTAGACATTGTTAATTC+TGG 0.197367 4_3:-2384263 Msa0624470:CDS
CACAAGGAATGATCTCTTTC+AGG 0.211115 4_3:-2383082 Msa0624470:intron
ACAGACTGGTTCTATTATTT+AGG 0.215828 4_3:+2381862 None:intergenic
TTCGATCCGGCTTCAGATTC+AGG 0.238932 4_3:-2387237 Msa0624470:CDS
GAAGAGGAAGCTAGGATAAT+TGG 0.240454 4_3:-2383478 Msa0624470:CDS
TCCAGAATATATCTTTGTTC+AGG 0.252267 4_3:+2384321 None:intergenic
GGCATGTTTCGAAAGTAAAT+TGG 0.268301 4_3:-2381613 Msa0624470:three_prime_UTR
TTTCACTTAATTGGTAGTTT+TGG 0.277014 4_3:-2384173 Msa0624470:CDS
AAACAAACTTTCTTCTTTCC+TGG 0.281721 4_3:+2383616 None:intergenic
ATATTCGGGACCTTTATATT+TGG 0.283338 4_3:+2383417 None:intergenic
ACCGGATTTATGGATCATTC+TGG 0.290368 4_3:-2387266 Msa0624470:CDS
GCAAAGCTTTCTGCAATATC+TGG 0.298861 4_3:-2383994 Msa0624470:CDS
AAGATTTCGACCTTTATATT+CGG 0.302596 4_3:+2383402 None:intergenic
TATATTCTGGAAGGGCTTAC+TGG 0.304715 4_3:-2384309 Msa0624470:CDS
TTCGAACGTGATGATGATTC+AGG 0.328805 4_3:+2387719 None:intergenic
GTTTCTTGAAATAATGTATT+GGG 0.338645 4_3:-2387632 Msa0624470:CDS
TGAGAACAATGGTTTGATTT+CGG 0.347269 4_3:+2387767 None:intergenic
CCCTGAACAAAGATATATTC+TGG 0.350481 4_3:-2384322 Msa0624470:CDS
AGCTAGGATAATTGGGGAAA+TGG 0.350485 4_3:-2383470 Msa0624470:CDS
AGTTCACCGCCTTCTTTAAG+AGG 0.359644 4_3:+2383127 None:intergenic
TGTCTCAGTTGTGCTACTTT+GGG 0.360660 4_3:+2381896 None:intergenic
TCATCTGGCACCATTGATAT+CGG 0.360756 4_3:-2387574 Msa0624470:CDS
TTCTGTTATCTCAGCATTGC+CGG 0.365599 4_3:+2381835 None:intergenic
TTGACCCATGTTTCCTTTGA+GGG 0.366663 4_3:-2387866 Msa0624470:five_prime_UTR
TTGTGATATGTGCAGATATT+TGG 0.367508 4_3:-2384366 Msa0624470:intron
CCTTTGAGGGATCAAATATT+CGG 0.373168 4_3:-2387853 Msa0624470:five_prime_UTR
ATTTAACCCTTGAACGTGTA+AGG 0.373326 4_3:-2384088 Msa0624470:CDS
CCGGATTTATGGATCATTCT+GGG 0.380166 4_3:-2387265 Msa0624470:CDS
AAGAGGAAGCTAGGATAATT+GGG 0.380292 4_3:-2383477 Msa0624470:CDS
TGAACTCAGTAAATCTCTTC+AGG 0.385444 4_3:-2383829 Msa0624470:CDS
GTGAAGTCCACCTCTGTGTT+AGG 0.391868 4_3:-2383289 Msa0624470:CDS
CCAGAATATATCTTTGTTCA+GGG 0.395159 4_3:+2384322 None:intergenic
TTTGATTTCGGCGGTGGTGA+GGG 0.397809 4_3:+2387779 None:intergenic
CAAGTTTGTCAAACTAAAAC+CGG 0.401162 4_3:-2387284 Msa0624470:CDS
GTTGACCCATGTTTCCTTTG+AGG 0.404728 4_3:-2387867 Msa0624470:five_prime_UTR
GCATGGATCTTCTTCGTGAC+AGG 0.413780 4_3:+2383774 None:intergenic
ATGTCTCAGTTGTGCTACTT+TGG 0.414351 4_3:+2381895 None:intergenic
GCTAAGTCACGCTTTACAAC+TGG 0.414993 4_3:-2384144 Msa0624470:CDS
TATACTGGTTTAAGAAGAAA+AGG 0.418063 4_3:-2387071 Msa0624470:CDS
GCTAGGATAATTGGGGAAAT+GGG 0.419177 4_3:-2383469 Msa0624470:CDS
CAAATTCCCTTACACGTTCA+AGG 0.423738 4_3:+2384081 None:intergenic
AGTTTACTCTGAAGGTGGTC+TGG 0.427036 4_3:-2381679 Msa0624470:three_prime_UTR
ACACAGTTGAAACTGTCCTT+TGG 0.427360 4_3:-2387437 Msa0624470:CDS
ACTTACAATTATTCGAGAAA+AGG 0.428503 4_3:-2387461 Msa0624470:CDS
AGTTTCTTGAAATAATGTAT+TGG 0.429668 4_3:-2387633 Msa0624470:CDS
GCTTACTGGATCATTGTAAA+GGG 0.433979 4_3:-2384295 Msa0624470:CDS
GCACAAATCGTAAGCGTGTC+CGG 0.434647 4_3:+2383348 None:intergenic
AGATTTCGACCTTTATATTC+GGG 0.436578 4_3:+2383403 None:intergenic
CTTACAATTATTCGAGAAAA+GGG 0.436985 4_3:-2387460 Msa0624470:CDS
TATTTCACCACCAAATATAA+AGG 0.438180 4_3:-2383427 Msa0624470:CDS
TTTAGCAGATTCATACTCGT+TGG 0.439544 4_3:+2383243 None:intergenic
TTCGGGACCTTTATATTTGG+TGG 0.444079 4_3:+2383420 None:intergenic
GTTTGATTTCGGCGGTGGTG+AGG 0.446319 4_3:+2387778 None:intergenic
TACATTGCGATCTTGAAGAT+TGG 0.447848 4_3:-2381634 Msa0624470:three_prime_UTR
TCAACCTATTTGCTTCCATA+CGG 0.452181 4_3:+2381801 None:intergenic
TATAAAGGTCCCGAATATAA+AGG 0.452744 4_3:-2383412 Msa0624470:CDS
AAAGAAGAAAGTTTGTTTCA+CGG 0.453031 4_3:-2383611 Msa0624470:CDS
GAGCCCGTATGGAAGCAAAT+AGG 0.454008 4_3:-2381805 Msa0624470:three_prime_UTR
CAATGGTTTGATTTCGGCGG+TGG 0.460993 4_3:+2387773 None:intergenic
GTCGAAATCTTGTAGTTCGT+TGG 0.461479 4_3:-2383390 Msa0624470:CDS
ATGGTGTATCTGATTCTAGA+TGG 0.465984 4_3:-2386987 Msa0624470:CDS
TCACGACTGAATTCCTCAAC+CGG 0.467175 4_3:+2383744 None:intergenic
TTAGCAGATTCATACTCGTT+GGG 0.467301 4_3:+2383244 None:intergenic
ATATTTGGTAGAGGCTAGTA+AGG 0.468582 4_3:-2384351 Msa0624470:CDS
AGTTACAGCAATTAACCTAA+AGG 0.470648 4_3:-2387375 Msa0624470:CDS
ATTCTGGGGCTGTTTCGATC+CGG 0.473632 4_3:-2387250 Msa0624470:CDS
TTATCACATCAGAAAATACT+TGG 0.477131 4_3:+2387043 None:intergenic
AATTATCCTAGCTTCCTCTT+CGG 0.481527 4_3:+2383480 None:intergenic
TGAACGTGTAAGGGAATTTG+AGG 0.486946 4_3:-2384078 Msa0624470:CDS
CGATGGAAAGAATGAATAGT+AGG 0.488512 4_3:+2387111 None:intergenic
ACTTGTTTAGTTTACTCTGA+AGG 0.490973 4_3:-2381687 Msa0624470:three_prime_UTR
CAACCTATTTGCTTCCATAC+GGG 0.491149 4_3:+2381802 None:intergenic
TTCCTTGTGGCAGCGTGTCA+TGG 0.492096 4_3:+2383096 None:intergenic
TTGATTTCGGCGGTGGTGAG+GGG 0.492741 4_3:+2387780 None:intergenic
ATTTCTGTTGGTGATGGAAA+AGG 0.497146 4_3:-2383924 Msa0624470:CDS
CCTGGTGTAGGTTTATCATC+TGG 0.498426 4_3:-2387589 Msa0624470:CDS
GAGGAGCGTCTGTTAAAGAA+TGG 0.502186 4_3:-2384059 Msa0624470:CDS
TTATTATCAATTTAGAGAGC+AGG 0.502362 4_3:-2383673 Msa0624470:CDS
ACATATGACAAGTGCAAGAA+TGG 0.503437 4_3:-2387006 Msa0624470:CDS
TATGTTAATCCTCTTAAAGA+AGG 0.505717 4_3:-2383136 Msa0624470:CDS
CTAGGAAGACTGTGATATGC+TGG 0.507650 4_3:+2381751 None:intergenic
GGCTTACTGGATCATTGTAA+AGG 0.509130 4_3:-2384296 Msa0624470:CDS
ATAGAACCAGTCTGTCTGTC+CGG 0.509429 4_3:-2381854 Msa0624470:three_prime_UTR
CCCAGAATGATCCATAAATC+CGG 0.511922 4_3:+2387265 None:intergenic
AGAAGAGCAGAGAGCCCGTA+TGG 0.514152 4_3:-2381816 Msa0624470:three_prime_UTR
AAATTCCCTTACACGTTCAA+GGG 0.524065 4_3:+2384082 None:intergenic
AAGACTGTGATATGCTGGCT+CGG 0.524579 4_3:+2381756 None:intergenic
GAGTGATGAAGACGAGGACA+AGG 0.525119 4_3:-2387656 Msa0624470:CDS
AGTAAAGATGTTACTAAAGG+TGG 0.525699 4_3:-2387329 Msa0624470:CDS
TTAAGTAAAGATGTTACTAA+AGG 0.532899 4_3:-2387332 Msa0624470:CDS
TAAAATCCGAAGAGGAAGCT+AGG 0.534245 4_3:-2383486 Msa0624470:CDS
TGGACTTGATCAGAGTAAGC+TGG 0.537397 4_3:-2387417 Msa0624470:CDS
TTTAACCCTTGAACGTGTAA+GGG 0.538674 4_3:-2384087 Msa0624470:CDS
GGATAAGAATGGTGGAGAAG+AGG 0.540568 4_3:+2387801 None:intergenic
CAGTTGTGCTACTTTGGGAT+CGG 0.540664 4_3:+2381901 None:intergenic
TATGGAAGCAAATAGGTTGA+AGG 0.541904 4_3:-2381798 Msa0624470:three_prime_UTR
ATAGGTTGAAGGCACTAGAA+AGG 0.545276 4_3:-2381787 Msa0624470:three_prime_UTR
GAACAAAGATATATTCTGGA+AGG 0.545629 4_3:-2384318 Msa0624470:CDS
TCGAACGTGATGATGATTCA+GGG 0.545699 4_3:+2387720 None:intergenic
TTACAATGAATATCAAAGCT+AGG 0.548001 4_3:+2381733 None:intergenic
TTGATCCCTCAAAGGAAACA+TGG 0.550023 4_3:+2387861 None:intergenic
TAGAAAAGAAGATCTCTGAA+TGG 0.552570 4_3:-2383719 Msa0624470:CDS
GCATTGCCGGACAGACAGAC+TGG 0.552928 4_3:+2381848 None:intergenic
TGTTTAGTTTACTCTGAAGG+TGG 0.553504 4_3:-2381684 Msa0624470:three_prime_UTR
GTCTGGCCTGAATCTGAAGC+CGG 0.554342 4_3:+2387231 None:intergenic
TCATCTTGTTTAGTATCACT+CGG 0.556149 4_3:+2383849 None:intergenic
ATTCTTGCACTTGTCATATG+TGG 0.556411 4_3:+2387008 None:intergenic
ACAATGATTCGTCCTGGTGT+AGG 0.558027 4_3:-2387601 Msa0624470:CDS
ATGAATGAACATAGAGAAGC+CGG 0.559260 4_3:-2383367 Msa0624470:CDS
CCTCAACCGGGTATTCTGCA+TGG 0.560403 4_3:+2383757 None:intergenic
TTGATATCGGAGACTCACTC+TGG 0.563655 4_3:-2387561 Msa0624470:intron
TGTTTCGAAAGTAAATTGGT+TGG 0.564878 4_3:-2381609 Msa0624470:three_prime_UTR
ACGTTCGAACTTTCATTAAG+CGG 0.566053 4_3:-2387705 Msa0624470:CDS
TTATCAATTTAGAGAGCAGG+AGG 0.570189 4_3:-2383670 Msa0624470:CDS
CCATGCAGAATACCCGGTTG+AGG 0.572308 4_3:-2383757 Msa0624470:CDS
TGCTGATTATATTGCTGACC+AGG 0.574125 4_3:-2383634 Msa0624470:CDS
GAGTGAGTCTCCGATATCAA+TGG 0.576084 4_3:+2387564 None:intergenic
AGACTGTGATATGCTGGCTC+GGG 0.576249 4_3:+2381757 None:intergenic
TGGTGTATCTGATTCTAGAT+GGG 0.576882 4_3:-2386986 Msa0624470:CDS
ACTGCAGTCTAAAATGTCGA+TGG 0.581323 4_3:+2387094 None:intergenic
CGACTCCATGTTGAGAACAA+TGG 0.581355 4_3:+2387756 None:intergenic
CTTGCACTTGTCATATGTGG+TGG 0.581725 4_3:+2387011 None:intergenic
TCTGTTGGTGATGGAAAAGG+TGG 0.587056 4_3:-2383921 Msa0624470:CDS
CCGAATATTTGATCCCTCAA+AGG 0.589729 4_3:+2387853 None:intergenic
CGGTGGTGAGGGGATAAGAA+TGG 0.591327 4_3:+2387790 None:intergenic
TGGTGAGGGGATAAGAATGG+TGG 0.593787 4_3:+2387793 None:intergenic
GAAGATCCATGCAGAATACC+CGG 0.595291 4_3:-2383763 Msa0624470:CDS
GTCCATGACACGCTGCCACA+AGG 0.600014 4_3:-2383098 Msa0624470:CDS
AACAAAGATATATTCTGGAA+GGG 0.601862 4_3:-2384317 Msa0624470:CDS
CGGATTTATGGATCATTCTG+GGG 0.606729 4_3:-2387264 Msa0624470:CDS
AAAAGCAATAAAATCCGAAG+AGG 0.611000 4_3:-2383494 Msa0624470:CDS
GAACAATGGTTTGATTTCGG+CGG 0.618979 4_3:+2387770 None:intergenic
CACGACTGAATTCCTCAACC+GGG 0.621923 4_3:+2383745 None:intergenic
TGAGCATAATCAGTGTCAGC+TGG 0.622789 4_3:+2383879 None:intergenic
CATTGTTCTCAACATGGAGT+CGG 0.625691 4_3:-2387755 Msa0624470:exon
TATGTGCAGATATTTGGTAG+AGG 0.627882 4_3:-2384360 Msa0624470:intron
CCAGATGATAAACCTACACC+AGG 0.628676 4_3:+2387589 None:intergenic
TGTTCTCAACATGGAGTCGG+AGG 0.631682 4_3:-2387752 Msa0624470:exon
GATGAAACAATGATTCGTCC+TGG 0.633484 4_3:-2387607 Msa0624470:CDS
TGATCCCTCAAAGGAAACAT+GGG 0.635142 4_3:+2387862 None:intergenic
TCAAACCATTGTTCTCAACA+TGG 0.639623 4_3:-2387761 Msa0624470:exon
GTTAATCCTCTTAAAGAAGG+CGG 0.650825 4_3:-2383133 Msa0624470:CDS
AGAGGAAGCTAGGATAATTG+GGG 0.665856 4_3:-2383476 Msa0624470:CDS
CTTACTGGATCATTGTAAAG+GGG 0.672451 4_3:-2384294 Msa0624470:CDS
TATCTGATTCTAGATGGGAA+AGG 0.684143 4_3:-2386981 Msa0624470:intron
TGAATCTGCTAAAGAGAACG+AGG 0.685092 4_3:-2383233 Msa0624470:CDS
CTGAAAGAGATCATTCCTTG+TGG 0.685594 4_3:+2383083 None:intergenic
CTTACTCTGATCAAGTCCAA+AGG 0.698359 4_3:+2387421 None:intergenic
TCATAGGAGTGATGAAGACG+AGG 0.701379 4_3:-2387662 Msa0624470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATTAAGAAAATATAAA+CGG + chr4_3:2381926-2381945 None:intergenic 10.0%
!!! TTATTTTATTTTTTTGTTGT+TGG - chr4_3:2385922-2385941 Msa0624470:intron 10.0%
!! TCACTTTAGATAAAATTTAA+GGG - chr4_3:2383436-2383455 Msa0624470:CDS 15.0%
!! AAAAAAATTATGGGAATTTA+CGG - chr4_3:2383840-2383859 Msa0624470:CDS 15.0%
!! AAAAAAATTATGGGAATTTA+TGG - chr4_3:2383840-2383859 Msa0624470:CDS 15.0%
!!! TTGAGAAAATAATTTTTTGT+TGG - chr4_3:2384785-2384804 Msa0624470:intron 15.0%
!!! TGAGAAAATAATTTTTTGTT+GGG - chr4_3:2384786-2384805 Msa0624470:intron 15.0%
!! TTCACTTTAATAAAAATCTT+GGG + chr4_3:2386151-2386170 None:intergenic 15.0%
!!! TGTTTTTAAAATTTCAATCT+TGG - chr4_3:2387180-2387199 Msa0624470:intron 15.0%
!! AGTTTCTTGAAATAATGTAT+TGG - chr4_3:2381822-2381841 Msa0624470:three_prime_UTR 20.0%
!! GTTTCTTGAAATAATGTATT+GGG - chr4_3:2381823-2381842 Msa0624470:three_prime_UTR 20.0%
!! TTAAGTAAAGATGTTACTAA+AGG - chr4_3:2382123-2382142 Msa0624470:intron 20.0%
!! CAAAATTATATCTCAACTTA+CGG + chr4_3:2382249-2382268 None:intergenic 20.0%
!! ATCTAACTCTATTAATCTAA+AGG - chr4_3:2382666-2382685 Msa0624470:intron 20.0%
!! TCTAACTCTATTAATCTAAA+GGG - chr4_3:2382667-2382686 Msa0624470:intron 20.0%
!!! AGTGTCTAATTTAAAACTAT+AGG - chr4_3:2382727-2382746 Msa0624470:intron 20.0%
!!! GTGTCTAATTTAAAACTATA+GGG - chr4_3:2382728-2382747 Msa0624470:intron 20.0%
!!! TGTCTAATTTAAAACTATAG+GGG - chr4_3:2382729-2382748 Msa0624470:intron 20.0%
!!! TTCATCTTTTTAATATTGCT+TGG - chr4_3:2383147-2383166 Msa0624470:CDS 20.0%
!!! TCATCTTTTTAATATTGCTT+GGG - chr4_3:2383148-2383167 Msa0624470:CDS 20.0%
!!! AGTTTGAGAAAATAATTTGT+TGG - chr4_3:2383300-2383319 Msa0624470:CDS 20.0%
!!! GTTTGAGAAAATAATTTGTT+GGG - chr4_3:2383301-2383320 Msa0624470:CDS 20.0%
!!! GTCACTTTAGATAAAATTTA+AGG - chr4_3:2383435-2383454 Msa0624470:CDS 20.0%
!! TCACAATGAATTATTTACAT+AGG + chr4_3:2383635-2383654 None:intergenic 20.0%
!!! AACAAAGTTTTATAATACCA+TGG + chr4_3:2383782-2383801 None:intergenic 20.0%
!! TTGTAGACTCAAAAAAATTA+TGG - chr4_3:2383830-2383849 Msa0624470:CDS 20.0%
!! TGTAGACTCAAAAAAATTAT+GGG - chr4_3:2383831-2383850 Msa0624470:CDS 20.0%
!!! TTCATCTTTTTAATATTGCT+TGG - chr4_3:2383147-2383166 Msa0624470:CDS 20.0%
!!! TCATCTTTTTAATATTGCTT+GGG - chr4_3:2383148-2383167 Msa0624470:CDS 20.0%
!!! TTGAGAAAATAATGTTTTGT+TGG - chr4_3:2384022-2384041 Msa0624470:CDS 20.0%
!!! TGAGAAAATAATGTTTTGTT+GGG - chr4_3:2384023-2384042 Msa0624470:CDS 20.0%
!! ATCTAACTCTATTAATCTAA+AGG - chr4_3:2382666-2382685 Msa0624470:intron 20.0%
!! TCTAACTCTATTAATCTAAA+GGG - chr4_3:2382667-2382686 Msa0624470:intron 20.0%
!! TCTCTTAAATCTTATCTTAA+GGG + chr4_3:2384183-2384202 None:intergenic 20.0%
!!! AGTGTCTAATTTAAAACTAT+AGG - chr4_3:2382727-2382746 Msa0624470:intron 20.0%
!!! GTGTCTAATTTAAAACTATA+GGG - chr4_3:2382728-2382747 Msa0624470:intron 20.0%
!!! TGTCTAATTTAAAACTATAG+GGG - chr4_3:2382729-2382748 Msa0624470:intron 20.0%
!! TCACATTGAATTATTTACAT+AGG + chr4_3:2384399-2384418 None:intergenic 20.0%
!!! AACAAAGTTTTATAATACCA+TGG + chr4_3:2383782-2383801 None:intergenic 20.0%
!! TTGTAGACTCAAAAAAATTA+TGG - chr4_3:2383830-2383849 Msa0624470:CDS 20.0%
!! TGTAGACTCAAAAAAATTAT+GGG - chr4_3:2383831-2383850 Msa0624470:CDS 20.0%
!!! GTCACTTTAGATAAAATTTA+AGG - chr4_3:2383435-2383454 Msa0624470:CDS 20.0%
!!! CTTTAGATAAAATTTAAGGT+AGG - chr4_3:2384939-2384958 Msa0624470:intron 20.0%
!! TGTCTAATTGAAAACTATAA+GGG - chr4_3:2384965-2384984 Msa0624470:intron 20.0%
!!! TGCTTTTTAAGAAAATTTCA+AGG - chr4_3:2384995-2385014 Msa0624470:intron 20.0%
!!! GCTTTTTAAGAAAATTTCAA+GGG - chr4_3:2384996-2385015 Msa0624470:intron 20.0%
!!! AAAGATGATTTTCACTTAAT+TGG - chr4_3:2385273-2385292 Msa0624470:intron 20.0%
!!! GGTAAAAAAAATATTTCTGT+TGG - chr4_3:2385519-2385538 Msa0624470:intron 20.0%
!!! TTTTAAACATTCATTGTACA+AGG + chr4_3:2385661-2385680 None:intergenic 20.0%
!!! TTTTATTGCTTTTTTTTCTC+CGG + chr4_3:2385954-2385973 None:intergenic 20.0%
!! CTTCACTTTAATAAAAATCT+TGG + chr4_3:2386152-2386171 None:intergenic 20.0%
!! TCACTAAATAGAAGTTATAA+TGG + chr4_3:2387427-2387446 None:intergenic 20.0%
!!! TCATTTTCTGAGTTTAAATA+TGG - chr4_3:2387885-2387904 Msa0624470:five_prime_UTR 20.0%
! ACTTACAATTATTCGAGAAA+AGG - chr4_3:2381994-2382013 Msa0624470:intron 25.0%
! CTTACAATTATTCGAGAAAA+GGG - chr4_3:2381995-2382014 Msa0624470:intron 25.0%
! AAATCAATCATAAGAAAACG+CGG + chr4_3:2382302-2382321 None:intergenic 25.0%
!!! TATACTGGTTTAAGAAGAAA+AGG - chr4_3:2382384-2382403 Msa0624470:intron 25.0%
! TTATCACATCAGAAAATACT+TGG + chr4_3:2382415-2382434 None:intergenic 25.0%
! CTAACTCTATTAATCTAAAG+GGG - chr4_3:2382668-2382687 Msa0624470:intron 25.0%
! TCGCTTAAATCTTATCTTAA+GGG + chr4_3:2382703-2382722 None:intergenic 25.0%
!! GTCTAATTTAAAACTATAGG+GGG - chr4_3:2382730-2382749 Msa0624470:intron 25.0%
! TCACATTGAATTATTTACGT+AGG + chr4_3:2382917-2382936 None:intergenic 25.0%
! TGATTGAAACTAGAACAAAT+TGG - chr4_3:2382988-2383007 Msa0624470:intron 25.0%
!!! AACCAAGTTTTATAATACCA+TGG + chr4_3:2383064-2383083 None:intergenic 25.0%
! ATCATAAAACATGTTCAAGT+AGG + chr4_3:2383262-2383281 None:intergenic 25.0%
! CTTTAGATAAAATTTAAGGG+TGG - chr4_3:2383439-2383458 Msa0624470:CDS 25.0%
! AGTGTCTAATTGAAAACTAT+AGG - chr4_3:2383464-2383483 Msa0624470:CDS 25.0%
! GTGTCTAATTGAAAACTATA+GGG - chr4_3:2383465-2383484 Msa0624470:CDS 25.0%
! TGTCTAATTGAAAACTATAG+GGG - chr4_3:2383466-2383485 Msa0624470:CDS 25.0%
! AATTATTTACATAGGTAGTG+TGG + chr4_3:2383627-2383646 None:intergenic 25.0%
! CTAACTCTATTAATCTAAAG+GGG - chr4_3:2382668-2382687 Msa0624470:intron 25.0%
! CTCTCTTAAATCTTATCTTA+AGG + chr4_3:2384184-2384203 None:intergenic 25.0%
! CTTAAGATAAGATTTAAGAG+AGG - chr4_3:2384182-2384201 Msa0624470:CDS 25.0%
!! GTCTAATTTAAAACTATAGG+GGG - chr4_3:2382730-2382749 Msa0624470:intron 25.0%
! AATTATTTACATAGGTAGTG+TGG + chr4_3:2383627-2383646 None:intergenic 25.0%
! TTCATCTTCTTAATATTGCT+TGG - chr4_3:2384629-2384648 Msa0624470:intron 25.0%
! TCATCTTCTTAATATTGCTT+GGG - chr4_3:2384630-2384649 Msa0624470:intron 25.0%
! GTGTTCAAATGTAAAATACT+CGG + chr4_3:2384722-2384741 None:intergenic 25.0%
! ATCATAAAACATGTTCAAGT+AGG + chr4_3:2383262-2383281 None:intergenic 25.0%
! ATCTAACTCTGTTAATCTAA+AGG - chr4_3:2384903-2384922 Msa0624470:intron 25.0%
! TCTAACTCTGTTAATCTAAA+GGG - chr4_3:2384904-2384923 Msa0624470:intron 25.0%
! GTGTCTAATTGAAAACTATA+AGG - chr4_3:2383465-2383484 Msa0624470:CDS 25.0%
! GTCTAATTGAAAACTATAAG+GGG - chr4_3:2384966-2384985 Msa0624470:intron 25.0%
! TTTAAGAAAATTTCAAGGGA+AGG - chr4_3:2385000-2385019 Msa0624470:intron 25.0%
!!! TCATGTTTTAAATTGTGTGT+GGG - chr4_3:2385061-2385080 Msa0624470:intron 25.0%
!! AACAAAGATATATTCTGGAA+GGG - chr4_3:2385138-2385157 Msa0624470:intron 25.0%
! ATTAAAAAAGATAGTTGTGG+GGG + chr4_3:2385243-2385262 None:intergenic 25.0%
! GATTAAAAAAGATAGTTGTG+GGG + chr4_3:2385244-2385263 None:intergenic 25.0%
! CGATTAAAAAAGATAGTTGT+GGG + chr4_3:2385245-2385264 None:intergenic 25.0%
! TCGATTAAAAAAGATAGTTG+TGG + chr4_3:2385246-2385265 None:intergenic 25.0%
!!! TTTCACTTAATTGGTAGTTT+TGG - chr4_3:2385282-2385301 Msa0624470:intron 25.0%
!! TACTGTTGATGAAAAAACAT+TGG + chr4_3:2385434-2385453 None:intergenic 25.0%
!! AAAAATATTTCTGTTGGTGA+TGG - chr4_3:2385525-2385544 Msa0624470:intron 25.0%
! TTATTATCAATTTAGAGAGC+AGG - chr4_3:2385782-2385801 Msa0624470:intron 25.0%
!! AAAGAAGAAAGTTTGTTTCA+CGG - chr4_3:2385844-2385863 Msa0624470:intron 25.0%
!!! TATTTTTTTGTTGTTGGTGT+AGG - chr4_3:2385928-2385947 Msa0624470:intron 25.0%
! TATTTCACCACCAAATATAA+AGG - chr4_3:2386028-2386047 Msa0624470:intron 25.0%
! AAGATTTCGACCTTTATATT+CGG + chr4_3:2386056-2386075 None:intergenic 25.0%
! TATGTTAATCCTCTTAAAGA+AGG - chr4_3:2386319-2386338 Msa0624470:intron 25.0%
! AGGTATGTTGATATCTTATT+CGG - chr4_3:2386393-2386412 Msa0624470:intron 25.0%
! TTTGAGTAATCTGAATTGTT+TGG - chr4_3:2386519-2386538 Msa0624470:intron 25.0%
! AATACCAAACAACAGAAAAA+TGG - chr4_3:2387024-2387043 Msa0624470:CDS 25.0%
! AGAAAAATGGATGAAAGAAA+TGG - chr4_3:2387037-2387056 Msa0624470:CDS 25.0%
! TGTTGAAAAACTTAAGATAC+AGG - chr4_3:2387204-2387223 Msa0624470:intron 25.0%
! TAACTGGATAAATAAGAAAC+TGG - chr4_3:2387258-2387277 Msa0624470:CDS 25.0%
!! ACAAAAATCACATTTTGCAT+GGG + chr4_3:2387529-2387548 None:intergenic 25.0%
! TTACAATGAATATCAAAGCT+AGG + chr4_3:2387725-2387744 None:intergenic 25.0%
! TGAGAACAATGGTTTGATTT+CGG + chr4_3:2381691-2381710 None:intergenic 30.0%
AGTTACAGCAATTAACCTAA+AGG - chr4_3:2382080-2382099 Msa0624470:intron 30.0%
!! GCAATTTTGAAGAATCCTTT+AGG + chr4_3:2382098-2382117 None:intergenic 30.0%
AGTAAAGATGTTACTAAAGG+TGG - chr4_3:2382126-2382145 Msa0624470:intron 30.0%
!!! GTTTTAGTTTGACAAACTTG+TGG + chr4_3:2382171-2382190 None:intergenic 30.0%
CAAGTTTGTCAAACTAAAAC+CGG - chr4_3:2382171-2382190 Msa0624470:intron 30.0%
TCAAACTAAAACCGGATTTA+TGG - chr4_3:2382179-2382198 Msa0624470:intron 30.0%
! ATTTTAGACTGCAGTTATAC+TGG - chr4_3:2382369-2382388 Msa0624470:intron 30.0%
!! TGTCTTTAGTTTGACTTGTT+GGG - chr4_3:2382535-2382554 Msa0624470:intron 30.0%
AAGTTGGAGAATGAAAGAAA+TGG - chr4_3:2382563-2382582 Msa0624470:intron 30.0%
CTCGCTTAAATCTTATCTTA+AGG + chr4_3:2382704-2382723 None:intergenic 30.0%
CTTAAGATAAGATTTAAGCG+AGG - chr4_3:2382702-2382721 Msa0624470:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+AGG - chr4_3:2382760-2382779 Msa0624470:intron 30.0%
AAAGTGAATGTGAATGACAA+TGG + chr4_3:2382870-2382889 None:intergenic 30.0%
AATTATTTACGTAGGTAGTG+TGG + chr4_3:2382909-2382928 None:intergenic 30.0%
AGAAAATAACGTTGTGATGA+TGG + chr4_3:2382942-2382961 None:intergenic 30.0%
AATACCATGGTGAAATATCT+CGG + chr4_3:2383051-2383070 None:intergenic 30.0%
CACCATGGTATTATAAAACT+TGG - chr4_3:2383059-2383078 Msa0624470:intron 30.0%
GTCGTAGACTCAAAATTTAT+GGG - chr4_3:2383111-2383130 Msa0624470:CDS 30.0%
! TCTTTTTAATATTGCTTGGG+AGG - chr4_3:2383151-2383170 Msa0624470:CDS 30.0%
! CTTTTTAATATTGCTTGGGA+GGG - chr4_3:2383152-2383171 Msa0624470:CDS 30.0%
GTGTTCGAATGTAAAATACT+CGG + chr4_3:2383240-2383259 None:intergenic 30.0%
!! AATTTGTTGGGTTCTAAAGT+TGG - chr4_3:2383313-2383332 Msa0624470:CDS 30.0%
GTCTAATTGAAAACTATAGG+GGG - chr4_3:2383467-2383486 Msa0624470:CDS 30.0%
!! TGCTTTTTAAGAAAACCTCA+AGG - chr4_3:2382759-2382778 Msa0624470:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+GGG - chr4_3:2382760-2382779 Msa0624470:intron 30.0%
ACTCACACAAACAATTACAA+GGG + chr4_3:2383539-2383558 None:intergenic 30.0%
AGAAAATAACGTTGTGATGA+TGG + chr4_3:2382942-2382961 None:intergenic 30.0%
TATATGCAAATGACTGAAAC+TGG - chr4_3:2383696-2383715 Msa0624470:CDS 30.0%
AATACCATGGTGAAATATCT+CGG + chr4_3:2383051-2383070 None:intergenic 30.0%
! TCTTTTTAATATTGCTTGGG+AGG - chr4_3:2383151-2383170 Msa0624470:CDS 30.0%
! CTTTTTAATATTGCTTGGGA+GGG - chr4_3:2383152-2383171 Msa0624470:CDS 30.0%
CACTTGCCAATCATATTTAT+AGG - chr4_3:2383917-2383936 Msa0624470:CDS 30.0%
TTGCCAATCATATTTATAGG+CGG - chr4_3:2383920-2383939 Msa0624470:CDS 30.0%
GTGTTCGAATGTAAAATACT+CGG + chr4_3:2383240-2383259 None:intergenic 30.0%
AAGTTGGAGAATGAAAGAAA+TGG - chr4_3:2382563-2382582 Msa0624470:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+AGG - chr4_3:2382760-2382779 Msa0624470:intron 30.0%
AATTACACTTACTTCCTTTG+AGG + chr4_3:2384257-2384276 None:intergenic 30.0%
TTTCTTAATTGTGTGTGTGT+GGG - chr4_3:2382820-2382839 Msa0624470:intron 30.0%
TGTGAATGACAATAGTATCA+CGG + chr4_3:2384344-2384363 None:intergenic 30.0%
AATACCATGGTGAATAATCT+CGG + chr4_3:2384531-2384550 None:intergenic 30.0%
CTAACTCTGTTAATCTAAAG+GGG - chr4_3:2384905-2384924 Msa0624470:intron 30.0%
!! GTCATGTTTTAAATTGTGTG+TGG - chr4_3:2385060-2385079 Msa0624470:intron 30.0%
TTGTGATATGTGCAGATATT+TGG - chr4_3:2385089-2385108 Msa0624470:intron 30.0%
CCAGAATATATCTTTGTTCA+GGG + chr4_3:2385136-2385155 None:intergenic 30.0%
TCCAGAATATATCTTTGTTC+AGG + chr4_3:2385137-2385156 None:intergenic 30.0%
GAACAAAGATATATTCTGGA+AGG - chr4_3:2385137-2385156 Msa0624470:intron 30.0%
!!! CTATCTTTTTTAATCGAAGC+TGG - chr4_3:2385249-2385268 Msa0624470:intron 30.0%
!! TCATCATCCATTTTTAGATC+AGG + chr4_3:2385498-2385517 None:intergenic 30.0%
GATCTAAAAATGGATGATGA+TGG - chr4_3:2385498-2385517 Msa0624470:intron 30.0%
! TCATCTTGTTTAGTATCACT+CGG + chr4_3:2385609-2385628 None:intergenic 30.0%
TAGAAAAGAAGATCTCTGAA+TGG - chr4_3:2385736-2385755 Msa0624470:intron 30.0%
AAACAAACTTTCTTCTTTCC+TGG + chr4_3:2385842-2385861 None:intergenic 30.0%
AAAAGCAATAAAATCCGAAG+AGG - chr4_3:2385961-2385980 Msa0624470:intron 30.0%
ATATTCGGGACCTTTATATT+TGG + chr4_3:2386041-2386060 None:intergenic 30.0%
TATAAAGGTCCCGAATATAA+AGG - chr4_3:2386043-2386062 Msa0624470:intron 30.0%
AGATTTCGACCTTTATATTC+GGG + chr4_3:2386055-2386074 None:intergenic 30.0%
TGTGAGTAATCTGAATTGTT+TGG - chr4_3:2386474-2386493 Msa0624470:intron 30.0%
TAACAACACACTTCTAGATA+AGG + chr4_3:2386576-2386595 None:intergenic 30.0%
GAACTGGATGAATAAGAAAT+TGG + chr4_3:2386633-2386652 None:intergenic 30.0%
! TATTCATCCAGTTCTTTTCT+TGG - chr4_3:2386639-2386658 Msa0624470:intron 30.0%
! TTGACAGTGATAATGTGTTA+AGG - chr4_3:2386862-2386881 Msa0624470:intron 30.0%
!! TCATCCATTTTTCTGTTGTT+TGG + chr4_3:2387031-2387050 None:intergenic 30.0%
GATAAACCAAATCGTAAACA+AGG - chr4_3:2387445-2387464 Msa0624470:CDS 30.0%
ATCTGATGCAAAGTTTGTAA+CGG - chr4_3:2387468-2387487 Msa0624470:intron 30.0%
! CACAAAAATCACATTTTGCA+TGG + chr4_3:2387530-2387549 None:intergenic 30.0%
!! ACAGACTGGTTCTATTATTT+AGG + chr4_3:2387596-2387615 None:intergenic 30.0%
! ACTTGTTTAGTTTACTCTGA+AGG - chr4_3:2387768-2387787 Msa0624470:five_prime_UTR 30.0%
TGTTTCGAAAGTAAATTGGT+TGG - chr4_3:2387846-2387865 Msa0624470:five_prime_UTR 30.0%
! CCTTTGAGGGATCAAATATT+CGG - chr4_3:2381602-2381621 Msa0624470:three_prime_UTR 35.0%
! TTAGGGTTTCAGGGTTTTTA+CGG + chr4_3:2381630-2381649 None:intergenic 35.0%
TCAAACCATTGTTCTCAACA+TGG - chr4_3:2381694-2381713 Msa0624470:three_prime_UTR 35.0%
ACGTTCGAACTTTCATTAAG+CGG - chr4_3:2381750-2381769 Msa0624470:three_prime_UTR 35.0%
TTATATCTCAACTTACGGTC+TGG + chr4_3:2382244-2382263 None:intergenic 35.0%
CGATGGAAAGAATGAATAGT+AGG + chr4_3:2382347-2382366 None:intergenic 35.0%
ATTCTTGCACTTGTCATATG+TGG + chr4_3:2382450-2382469 None:intergenic 35.0%
ACATATGACAAGTGCAAGAA+TGG - chr4_3:2382449-2382468 Msa0624470:intron 35.0%
ATGGTGTATCTGATTCTAGA+TGG - chr4_3:2382468-2382487 Msa0624470:intron 35.0%
TGGTGTATCTGATTCTAGAT+GGG - chr4_3:2382469-2382488 Msa0624470:intron 35.0%
TATCTGATTCTAGATGGGAA+AGG - chr4_3:2382474-2382493 Msa0624470:intron 35.0%
!! CTGTCTTTAGTTTGACTTGT+TGG - chr4_3:2382534-2382553 Msa0624470:intron 35.0%
TGGAGAATGAAAGAAATGGT+AGG - chr4_3:2382567-2382586 Msa0624470:intron 35.0%
GGAGAATGAAAGAAATGGTA+GGG - chr4_3:2382568-2382587 Msa0624470:intron 35.0%
GAGAATGAAAGAAATGGTAG+GGG - chr4_3:2382569-2382588 Msa0624470:intron 35.0%
! ATTCCATTTTCATTCACTCC+GGG + chr4_3:2382632-2382651 None:intergenic 35.0%
! CATTCCATTTTCATTCACTC+CGG + chr4_3:2382633-2382652 None:intergenic 35.0%
! TTTAAAACTATAGGGGGTGT+TGG - chr4_3:2382736-2382755 Msa0624470:intron 35.0%
AGACTCACACACAATTACAA+GGG + chr4_3:2382798-2382817 None:intergenic 35.0%
AAGACTCACACACAATTACA+AGG + chr4_3:2382799-2382818 None:intergenic 35.0%
TTCTTAATTGTGTGTGTGTG+TGG - chr4_3:2382821-2382840 Msa0624470:intron 35.0%
TCTTAATTGTGTGTGTGTGT+GGG - chr4_3:2382822-2382841 Msa0624470:intron 35.0%
CGTCGTAGACTCAAAATTTA+TGG - chr4_3:2383110-2383129 Msa0624470:CDS 35.0%
CACTTGCCAATCATATGTAT+AGG - chr4_3:2383198-2383217 Msa0624470:CDS 35.0%
TTGCCAATCATATGTATAGG+CGG - chr4_3:2383201-2383220 Msa0624470:CDS 35.0%
TGGAGAATGAGAGAAATAGT+AGG - chr4_3:2383333-2383352 Msa0624470:CDS 35.0%
GGAGAATGAGAGAAATAGTA+GGG - chr4_3:2383334-2383353 Msa0624470:CDS 35.0%
GAGAATGAGAGAAATAGTAG+GGG - chr4_3:2383335-2383354 Msa0624470:CDS 35.0%
AGAATGAGAGAAATAGTAGG+GGG - chr4_3:2383336-2383355 Msa0624470:CDS 35.0%
TGGAGTGAATGAAAATGGAA+GGG - chr4_3:2383382-2383401 Msa0624470:CDS 35.0%
GCAGCTAACGTTAATCTTAA+GGG - chr4_3:2383404-2383423 Msa0624470:CDS 35.0%
CAGCTAACGTTAATCTTAAG+GGG - chr4_3:2383405-2383424 Msa0624470:CDS 35.0%
!! TTTTAAGAAAACCTCAAGGG+AGG - chr4_3:2383500-2383519 Msa0624470:CDS 35.0%
CTCACACAAACAATTACAAG+GGG + chr4_3:2383538-2383557 None:intergenic 35.0%
GACTCACACAAACAATTACA+AGG + chr4_3:2383540-2383559 None:intergenic 35.0%
!!! GTTTTGTTGGGTTCTAAAGT+TGG - chr4_3:2384035-2384054 Msa0624470:CDS 35.0%
TGGAGAATGAAAGAAATGGT+AGG - chr4_3:2382567-2382586 Msa0624470:intron 35.0%
GGAGAATGAAAGAAATGGTA+GGG - chr4_3:2382568-2382587 Msa0624470:intron 35.0%
GAGAATGAAAGAAATGGTAG+GGG - chr4_3:2382569-2382588 Msa0624470:intron 35.0%
! ATTCCATTTTCATTCACTCG+AGG + chr4_3:2384112-2384131 None:intergenic 35.0%
TCGAGTGAATGAAAATGGAA+TGG - chr4_3:2384111-2384130 Msa0624470:CDS 35.0%
! TTTAAAACTATAGGGGGTGT+TGG - chr4_3:2382736-2382755 Msa0624470:intron 35.0%
TGACTCACACACAATTACAA+GGG + chr4_3:2384282-2384301 None:intergenic 35.0%
ATGACTCACACACAATTACA+AGG + chr4_3:2384283-2384302 None:intergenic 35.0%
GTTTCTTAATTGTGTGTGTG+TGG - chr4_3:2382819-2382838 Msa0624470:intron 35.0%
TCTTCTTAATATTGCTTGGG+AGG - chr4_3:2384633-2384652 Msa0624470:intron 35.0%
CTTCTTAATATTGCTTGGGA+GGG - chr4_3:2384634-2384653 Msa0624470:intron 35.0%
CACTTGCCAATCATATGTAT+AGG - chr4_3:2383198-2383217 Msa0624470:CDS 35.0%
TTGCCAATCATATGTATAGG+CGG - chr4_3:2383201-2383220 Msa0624470:CDS 35.0%
!! TGGGTTCTAAAGTTGTAGAA+TGG - chr4_3:2384805-2384824 Msa0624470:intron 35.0%
!! GGGTTCTAAAGTTGTAGAAT+GGG - chr4_3:2384806-2384825 Msa0624470:intron 35.0%
AAGTTGTAGAATGGGAGAAA+TGG - chr4_3:2384814-2384833 Msa0624470:intron 35.0%
AAGCTTGGAGTGAATGAAAA+TGG - chr4_3:2384863-2384882 Msa0624470:intron 35.0%
TTGGAGTGAATGAAAATGGA+AGG - chr4_3:2384867-2384886 Msa0624470:intron 35.0%
TGGAGTGAATGAAAATGGAA+GGG - chr4_3:2383382-2383401 Msa0624470:CDS 35.0%
ACACACACACACAATTACAA+GGG + chr4_3:2385042-2385061 None:intergenic 35.0%
TATGTGCAGATATTTGGTAG+AGG - chr4_3:2385095-2385114 Msa0624470:intron 35.0%
ATATTTGGTAGAGGCTAGTA+AGG - chr4_3:2385104-2385123 Msa0624470:intron 35.0%
CCCTGAACAAAGATATATTC+TGG - chr4_3:2385133-2385152 Msa0624470:intron 35.0%
GCTTACTGGATCATTGTAAA+GGG - chr4_3:2385160-2385179 Msa0624470:intron 35.0%
CTTACTGGATCATTGTAAAG+GGG - chr4_3:2385161-2385180 Msa0624470:intron 35.0%
! TTGTAAAGGGGACTATTTTC+TGG - chr4_3:2385173-2385192 Msa0624470:intron 35.0%
CTGGTAGACATTGTTAATTC+TGG - chr4_3:2385192-2385211 Msa0624470:intron 35.0%
ATTTAACCCTTGAACGTGTA+AGG - chr4_3:2385367-2385386 Msa0624470:intron 35.0%
TTTAACCCTTGAACGTGTAA+GGG - chr4_3:2385368-2385387 Msa0624470:intron 35.0%
AAATTCCCTTACACGTTCAA+GGG + chr4_3:2385376-2385395 None:intergenic 35.0%
AGCTGAACCTGATCTAAAAA+TGG - chr4_3:2385488-2385507 Msa0624470:intron 35.0%
!! ATTTCTGTTGGTGATGGAAA+AGG - chr4_3:2385531-2385550 Msa0624470:intron 35.0%
TGAACTCAGTAAATCTCTTC+AGG - chr4_3:2385626-2385645 Msa0624470:intron 35.0%
TTATCAATTTAGAGAGCAGG+AGG - chr4_3:2385785-2385804 Msa0624470:intron 35.0%
AATTATCCTAGCTTCCTCTT+CGG + chr4_3:2385978-2385997 None:intergenic 35.0%
AAGAGGAAGCTAGGATAATT+GGG - chr4_3:2385978-2385997 Msa0624470:intron 35.0%
ATGAATGAACATAGAGAAGC+CGG - chr4_3:2386088-2386107 Msa0624470:intron 35.0%
!!! ATTTTTTCCTAACACAGAGG+TGG + chr4_3:2386176-2386195 None:intergenic 35.0%
!!! CCAATTTTTTCCTAACACAG+AGG + chr4_3:2386179-2386198 None:intergenic 35.0%
CCTCTGTGTTAGGAAAAAAT+TGG - chr4_3:2386176-2386195 Msa0624470:intron 35.0%
TTAGCAGATTCATACTCGTT+GGG + chr4_3:2386214-2386233 None:intergenic 35.0%
TTTAGCAGATTCATACTCGT+TGG + chr4_3:2386215-2386234 None:intergenic 35.0%
GTTAATCCTCTTAAAGAAGG+CGG - chr4_3:2386322-2386341 Msa0624470:intron 35.0%
! AGTGTGTTGTTAATGATGCA+AGG - chr4_3:2386584-2386603 Msa0624470:intron 35.0%
! GTGTGTTGTTAATGATGCAA+GGG - chr4_3:2386585-2386604 Msa0624470:intron 35.0%
TTAGAGACTACTAGAATGTC+TGG - chr4_3:2387333-2387352 Msa0624470:CDS 35.0%
AGGAATCTAGAGACTTAAGA+AGG + chr4_3:2387378-2387397 None:intergenic 35.0%
!! ACATGCTGACTTCATAACAA+AGG + chr4_3:2387398-2387417 None:intergenic 35.0%
! TCAGATCCTTGTTTACGATT+TGG + chr4_3:2387454-2387473 None:intergenic 35.0%
! AGTACCTTCTCTTTTATTGC+AGG - chr4_3:2387492-2387511 Msa0624470:intron 35.0%
TCAACCTATTTGCTTCCATA+CGG + chr4_3:2387657-2387676 None:intergenic 35.0%
! TATGGAAGCAAATAGGTTGA+AGG - chr4_3:2387657-2387676 Msa0624470:CDS 35.0%
! TGTTTAGTTTACTCTGAAGG+TGG - chr4_3:2387771-2387790 Msa0624470:five_prime_UTR 35.0%
TACATTGCGATCTTGAAGAT+TGG - chr4_3:2387821-2387840 Msa0624470:five_prime_UTR 35.0%
GGCATGTTTCGAAAGTAAAT+TGG - chr4_3:2387842-2387861 Msa0624470:five_prime_UTR 35.0%
! AAATGTTTTCAGCTGGGACT+TGG - chr4_3:2381565-2381584 Msa0624470:three_prime_UTR 40.0%
! AATGTTTTCAGCTGGGACTT+GGG - chr4_3:2381566-2381585 Msa0624470:three_prime_UTR 40.0%
TTGACCCATGTTTCCTTTGA+GGG - chr4_3:2381589-2381608 Msa0624470:three_prime_UTR 40.0%
TGATCCCTCAAAGGAAACAT+GGG + chr4_3:2381596-2381615 None:intergenic 40.0%
TTGATCCCTCAAAGGAAACA+TGG + chr4_3:2381597-2381616 None:intergenic 40.0%
CCGAATATTTGATCCCTCAA+AGG + chr4_3:2381605-2381624 None:intergenic 40.0%
!!! AGAGGTGTTTTAGGGTTTCA+GGG + chr4_3:2381639-2381658 None:intergenic 40.0%
!!! AAGAGGTGTTTTAGGGTTTC+AGG + chr4_3:2381640-2381659 None:intergenic 40.0%
! GAACAATGGTTTGATTTCGG+CGG + chr4_3:2381688-2381707 None:intergenic 40.0%
CATTGTTCTCAACATGGAGT+CGG - chr4_3:2381700-2381719 Msa0624470:three_prime_UTR 40.0%
! TCGAACGTGATGATGATTCA+GGG + chr4_3:2381738-2381757 None:intergenic 40.0%
! TTCGAACGTGATGATGATTC+AGG + chr4_3:2381739-2381758 None:intergenic 40.0%
!!! ATCGCAGTTTTGAGGATCAT+AGG - chr4_3:2381777-2381796 Msa0624470:three_prime_UTR 40.0%
GATGAAACAATGATTCGTCC+TGG - chr4_3:2381848-2381867 Msa0624470:three_prime_UTR 40.0%
TCATCTGGCACCATTGATAT+CGG - chr4_3:2381881-2381900 Msa0624470:three_prime_UTR 40.0%
ACACAGTTGAAACTGTCCTT+TGG - chr4_3:2382018-2382037 Msa0624470:intron 40.0%
CTTACTCTGATCAAGTCCAA+AGG + chr4_3:2382037-2382056 None:intergenic 40.0%
ACCGGATTTATGGATCATTC+TGG - chr4_3:2382189-2382208 Msa0624470:intron 40.0%
CCCAGAATGATCCATAAATC+CGG + chr4_3:2382193-2382212 None:intergenic 40.0%
CCGGATTTATGGATCATTCT+GGG - chr4_3:2382190-2382209 Msa0624470:intron 40.0%
CGGATTTATGGATCATTCTG+GGG - chr4_3:2382191-2382210 Msa0624470:intron 40.0%
! ACTGCAGTCTAAAATGTCGA+TGG + chr4_3:2382364-2382383 None:intergenic 40.0%
!! GACTTGTTGGGTTCTAAAGT+TGG - chr4_3:2382547-2382566 Msa0624470:intron 40.0%
CGGAGTGAATGAAAATGGAA+TGG - chr4_3:2382631-2382650 Msa0624470:intron 40.0%
GGGAAATTACACTTCCTTTG+AGG + chr4_3:2382777-2382796 None:intergenic 40.0%
GACTCACACACAATTACAAG+GGG + chr4_3:2382797-2382816 None:intergenic 40.0%
ACTTCCGAGATATTTCACCA+TGG - chr4_3:2383044-2383063 Msa0624470:intron 40.0%
GAATGAGAGAAATAGTAGGG+GGG - chr4_3:2383337-2383356 Msa0624470:CDS 40.0%
AATGAGAGAAATAGTAGGGG+GGG - chr4_3:2383338-2383357 Msa0624470:CDS 40.0%
AAGCCTGGAGTGAATGAAAA+TGG - chr4_3:2383377-2383396 Msa0624470:CDS 40.0%
! CTTCCATTTTCATTCACTCC+AGG + chr4_3:2383383-2383402 None:intergenic 40.0%
CTGGAGTGAATGAAAATGGA+AGG - chr4_3:2383381-2383400 Msa0624470:CDS 40.0%
GGCAGCTAACGTTAATCTTA+AGG - chr4_3:2383403-2383422 Msa0624470:CDS 40.0%
! TTGAAAACTATAGGGGGTGT+TGG - chr4_3:2383473-2383492 Msa0624470:CDS 40.0%
ACTTCCGAGATATTTCACCA+TGG - chr4_3:2383044-2383063 Msa0624470:intron 40.0%
ATATGATTGGCAAGTGCAGA+GGG + chr4_3:2383194-2383213 None:intergenic 40.0%
AATATGATTGGCAAGTGCAG+AGG + chr4_3:2383914-2383933 None:intergenic 40.0%
GTGCCGCCTATAAATATGAT+TGG + chr4_3:2383926-2383945 None:intergenic 40.0%
AAGCCTCGAGTGAATGAAAA+TGG - chr4_3:2384106-2384125 Msa0624470:CDS 40.0%
GACTCACACACAATTACAAG+GGG + chr4_3:2382797-2382816 None:intergenic 40.0%
ACTTCCGAGATTATTCACCA+TGG - chr4_3:2384524-2384543 Msa0624470:intron 40.0%
TGTAGAATGGGAGAAATGGT+AGG - chr4_3:2384818-2384837 Msa0624470:intron 40.0%
GTAGAATGGGAGAAATGGTA+GGG - chr4_3:2384819-2384838 Msa0624470:intron 40.0%
TAGAATGGGAGAAATGGTAG+GGG - chr4_3:2384820-2384839 Msa0624470:intron 40.0%
GAGAGACAATGATTGAAGCT+TGG - chr4_3:2384848-2384867 Msa0624470:intron 40.0%
CACACACACACAATTACAAG+GGG + chr4_3:2385041-2385060 None:intergenic 40.0%
GACACACACACACAATTACA+AGG + chr4_3:2385043-2385062 None:intergenic 40.0%
! TATATTCTGGAAGGGCTTAC+TGG - chr4_3:2385146-2385165 Msa0624470:intron 40.0%
GGCTTACTGGATCATTGTAA+AGG - chr4_3:2385159-2385178 Msa0624470:intron 40.0%
CAAATTCCCTTACACGTTCA+AGG + chr4_3:2385377-2385396 None:intergenic 40.0%
TGAACGTGTAAGGGAATTTG+AGG - chr4_3:2385377-2385396 Msa0624470:intron 40.0%
GCAAAGCTTTCTGCAATATC+TGG - chr4_3:2385461-2385480 Msa0624470:intron 40.0%
! TGCTGATTATATTGCTGACC+AGG - chr4_3:2385821-2385840 Msa0624470:intron 40.0%
ACAGAATGAGTGCTTACAGT+AGG + chr4_3:2385870-2385889 None:intergenic 40.0%
!!! TTTTTGTTGTTGGTGTAGGC+CGG - chr4_3:2385932-2385951 Msa0624470:intron 40.0%
TAAAATCCGAAGAGGAAGCT+AGG - chr4_3:2385969-2385988 Msa0624470:intron 40.0%
GAAGAGGAAGCTAGGATAAT+TGG - chr4_3:2385977-2385996 Msa0624470:intron 40.0%
AGAGGAAGCTAGGATAATTG+GGG - chr4_3:2385979-2385998 Msa0624470:intron 40.0%
AGCTAGGATAATTGGGGAAA+TGG - chr4_3:2385985-2386004 Msa0624470:intron 40.0%
GCTAGGATAATTGGGGAAAT+GGG - chr4_3:2385986-2386005 Msa0624470:intron 40.0%
TTCGGGACCTTTATATTTGG+TGG + chr4_3:2386038-2386057 None:intergenic 40.0%
GTCGAAATCTTGTAGTTCGT+TGG - chr4_3:2386065-2386084 Msa0624470:intron 40.0%
TGAATCTGCTAAAGAGAACG+AGG - chr4_3:2386222-2386241 Msa0624470:intron 40.0%
CTGAAAGAGATCATTCCTTG+TGG + chr4_3:2386375-2386394 None:intergenic 40.0%
CACAAGGAATGATCTCTTTC+AGG - chr4_3:2386373-2386392 Msa0624470:intron 40.0%
CACACATCCAAGAAAAGAAC+TGG + chr4_3:2386649-2386668 None:intergenic 40.0%
AAGGTTGTTCTTCCTATGAG+AGG - chr4_3:2386881-2386900 Msa0624470:intron 40.0%
AGACATGAGGGAGTTTGAAT+CGG - chr4_3:2386973-2386992 Msa0624470:intron 40.0%
! AAAGAAATGGTGATGTCGTG+AGG - chr4_3:2387050-2387069 Msa0624470:CDS 40.0%
! CTTCGATTTGTGAATTCACG+AGG - chr4_3:2387114-2387133 Msa0624470:CDS 40.0%
GATTTGTGAATTCACGAGGA+GGG - chr4_3:2387118-2387137 Msa0624470:CDS 40.0%
! CACACATTCAAAGAAAGCAC+TGG - chr4_3:2387230-2387249 Msa0624470:CDS 40.0%
!! GAAAGCACTGGATAACTAAC+TGG - chr4_3:2387242-2387261 Msa0624470:CDS 40.0%
GGTTCCTGCAATAAAAGAGA+AGG + chr4_3:2387499-2387518 None:intergenic 40.0%
!! TGTCTCAGTTGTGCTACTTT+GGG + chr4_3:2387562-2387581 None:intergenic 40.0%
!! ATGTCTCAGTTGTGCTACTT+TGG + chr4_3:2387563-2387582 None:intergenic 40.0%
TTCTGTTATCTCAGCATTGC+CGG + chr4_3:2387623-2387642 None:intergenic 40.0%
CAACCTATTTGCTTCCATAC+GGG + chr4_3:2387656-2387675 None:intergenic 40.0%
!! ATAGGTTGAAGGCACTAGAA+AGG - chr4_3:2387668-2387687 Msa0624470:CDS 40.0%
GTTGACCCATGTTTCCTTTG+AGG - chr4_3:2381588-2381607 Msa0624470:three_prime_UTR 45.0%
!!! GGTGGAGAAGAGGTGTTTTA+GGG + chr4_3:2381647-2381666 None:intergenic 45.0%
!!! TGGTGGAGAAGAGGTGTTTT+AGG + chr4_3:2381648-2381667 None:intergenic 45.0%
! GGATAAGAATGGTGGAGAAG+AGG + chr4_3:2381657-2381676 None:intergenic 45.0%
CGACTCCATGTTGAGAACAA+TGG + chr4_3:2381702-2381721 None:intergenic 45.0%
! GCGGAATTATCGCAGTTTTG+AGG - chr4_3:2381769-2381788 Msa0624470:three_prime_UTR 45.0%
TCATAGGAGTGATGAAGACG+AGG - chr4_3:2381793-2381812 Msa0624470:three_prime_UTR 45.0%
ACAATGATTCGTCCTGGTGT+AGG - chr4_3:2381854-2381873 Msa0624470:three_prime_UTR 45.0%
CCAGATGATAAACCTACACC+AGG + chr4_3:2381869-2381888 None:intergenic 45.0%
CCTGGTGTAGGTTTATCATC+TGG - chr4_3:2381866-2381885 Msa0624470:three_prime_UTR 45.0%
GAGTGAGTCTCCGATATCAA+TGG + chr4_3:2381894-2381913 None:intergenic 45.0%
TTGATATCGGAGACTCACTC+TGG - chr4_3:2381894-2381913 Msa0624470:three_prime_UTR 45.0%
ACAAATGTGCAAGTGACGCA+TGG + chr4_3:2381971-2381990 None:intergenic 45.0%
TGCGTCACTTGCACATTTGT+AGG - chr4_3:2381971-2381990 Msa0624470:intron 45.0%
TGGACTTGATCAGAGTAAGC+TGG - chr4_3:2382038-2382057 Msa0624470:intron 45.0%
CTTGCACTTGTCATATGTGG+TGG + chr4_3:2382447-2382466 None:intergenic 45.0%
GATAGGCAATGATTGAAGCC+CGG - chr4_3:2382611-2382630 Msa0624470:intron 45.0%
AAGCCCGGAGTGAATGAAAA+TGG - chr4_3:2382626-2382645 Msa0624470:intron 45.0%
ATGATTGGCAAGTGCAGAGA+GGG + chr4_3:2383192-2383211 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+AGG + chr4_3:2383193-2383212 None:intergenic 45.0%
GTGCCGCCTATACATATGAT+TGG + chr4_3:2383207-2383226 None:intergenic 45.0%
GAGAGACAATGATTGAAGCC+TGG - chr4_3:2383362-2383381 Msa0624470:CDS 45.0%
AATTACACTCACCTCCCTTG+AGG + chr4_3:2383514-2383533 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+GGG + chr4_3:2383193-2383212 None:intergenic 45.0%
ATGATTGGCAAGTGCAGAGA+GGG + chr4_3:2383192-2383211 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+AGG + chr4_3:2383193-2383212 None:intergenic 45.0%
GTGCCGCCTATACATATGAT+TGG + chr4_3:2383207-2383226 None:intergenic 45.0%
GCTAAGTCACGCTTTACAAC+TGG - chr4_3:2385311-2385330 Msa0624470:intron 45.0%
!! GAGGAGCGTCTGTTAAAGAA+TGG - chr4_3:2385396-2385415 Msa0624470:intron 45.0%
!! TCTGTTGGTGATGGAAAAGG+TGG - chr4_3:2385534-2385553 Msa0624470:intron 45.0%
TGAGCATAATCAGTGTCAGC+TGG + chr4_3:2385579-2385598 None:intergenic 45.0%
GAAGATCCATGCAGAATACC+CGG - chr4_3:2385692-2385711 Msa0624470:intron 45.0%
TCACGACTGAATTCCTCAAC+CGG + chr4_3:2385714-2385733 None:intergenic 45.0%
AGTTCACCGCCTTCTTTAAG+AGG + chr4_3:2386331-2386350 None:intergenic 45.0%
AGACATTGCAGAGTGTGAGA+GGG + chr4_3:2386766-2386785 None:intergenic 45.0%
GTGGGTATACAACCTCTCAT+AGG + chr4_3:2386896-2386915 None:intergenic 45.0%
! AAATCGTGGTTGATGCCACA+AGG + chr4_3:2386925-2386944 None:intergenic 45.0%
CGATTTGTGAATTCACGAGG+AGG - chr4_3:2387117-2387136 Msa0624470:CDS 45.0%
!! ACATTTTGCATGGGCTGAGA+AGG + chr4_3:2387520-2387539 None:intergenic 45.0%
!! CAGTTGTGCTACTTTGGGAT+CGG + chr4_3:2387557-2387576 None:intergenic 45.0%
ATAGAACCAGTCTGTCTGTC+CGG - chr4_3:2387601-2387620 Msa0624470:CDS 45.0%
! AAGACTGTGATATGCTGGCT+CGG + chr4_3:2387702-2387721 None:intergenic 45.0%
CTAGGAAGACTGTGATATGC+TGG + chr4_3:2387707-2387726 None:intergenic 45.0%
! AGTTTACTCTGAAGGTGGTC+TGG - chr4_3:2387776-2387795 Msa0624470:five_prime_UTR 45.0%
TGGTGAGGGGATAAGAATGG+TGG + chr4_3:2381665-2381684 None:intergenic 50.0%
! TTTGATTTCGGCGGTGGTGA+GGG + chr4_3:2381679-2381698 None:intergenic 50.0%
! CAATGGTTTGATTTCGGCGG+TGG + chr4_3:2381685-2381704 None:intergenic 50.0%
TGTTCTCAACATGGAGTCGG+AGG - chr4_3:2381703-2381722 Msa0624470:three_prime_UTR 50.0%
GAGTGATGAAGACGAGGACA+AGG - chr4_3:2381799-2381818 Msa0624470:three_prime_UTR 50.0%
!! ATTCTGGGGCTGTTTCGATC+CGG - chr4_3:2382205-2382224 Msa0624470:intron 50.0%
TTCGATCCGGCTTCAGATTC+AGG - chr4_3:2382218-2382237 Msa0624470:intron 50.0%
CGAGAGAGAGAGAGAGAGAT+AGG - chr4_3:2382594-2382613 Msa0624470:intron 50.0%
ACATAGGTAGTGTGGCACAC+TGG + chr4_3:2383619-2383638 None:intergenic 50.0%
GCATGGATCTTCTTCGTGAC+AGG + chr4_3:2385684-2385703 None:intergenic 50.0%
CACGACTGAATTCCTCAACC+GGG + chr4_3:2385713-2385732 None:intergenic 50.0%
GCACAAATCGTAAGCGTGTC+CGG + chr4_3:2386110-2386129 None:intergenic 50.0%
GTGAAGTCCACCTCTGTGTT+AGG - chr4_3:2386166-2386185 Msa0624470:intron 50.0%
CAGACATTGCAGAGTGTGAG+AGG + chr4_3:2386767-2386786 None:intergenic 50.0%
!! TGTAGGGGCAGAGAAGTGTT+CGG + chr4_3:2386793-2386812 None:intergenic 50.0%
!! GCGTCAACAAGGTGTTGTAG+GGG + chr4_3:2386808-2386827 None:intergenic 50.0%
!! GGCGTCAACAAGGTGTTGTA+GGG + chr4_3:2386809-2386828 None:intergenic 50.0%
!! AGGCGTCAACAAGGTGTTGT+AGG + chr4_3:2386810-2386829 None:intergenic 50.0%
TATACCCACGCTCTTCCTTG+TGG - chr4_3:2386907-2386926 Msa0624470:intron 50.0%
GGCATCAACCACGATTTCGT+CGG - chr4_3:2386928-2386947 Msa0624470:intron 50.0%
TGTAGTCTCCGACGAAATCG+TGG + chr4_3:2386939-2386958 None:intergenic 50.0%
GATTTCGTCGGAGACTACAG+CGG - chr4_3:2386940-2386959 Msa0624470:intron 50.0%
GGTGGAGGTAGAAGACATGA+GGG - chr4_3:2386961-2386980 Msa0624470:intron 50.0%
GCATATCGACGGCGACAAAA+CGG - chr4_3:2387075-2387094 Msa0624470:CDS 50.0%
AACTGGAGCAGATCTGCACT+CGG - chr4_3:2387275-2387294 Msa0624470:CDS 50.0%
GAGCCCGTATGGAAGCAAAT+AGG - chr4_3:2387650-2387669 Msa0624470:CDS 50.0%
!! AGACTGTGATATGCTGGCTC+GGG + chr4_3:2387701-2387720 None:intergenic 50.0%
CGGTGGTGAGGGGATAAGAA+TGG + chr4_3:2381668-2381687 None:intergenic 55.0%
TTGATTTCGGCGGTGGTGAG+GGG + chr4_3:2381678-2381697 None:intergenic 55.0%
! GTTTGATTTCGGCGGTGGTG+AGG + chr4_3:2381680-2381699 None:intergenic 55.0%
CAAGTGACGCATGGATGAGG+AGG + chr4_3:2381962-2381981 None:intergenic 55.0%
GTGCAAGTGACGCATGGATG+AGG + chr4_3:2381965-2381984 None:intergenic 55.0%
! GTCTGGCCTGAATCTGAAGC+CGG + chr4_3:2382227-2382246 None:intergenic 55.0%
ACGTAGGTAGTGTGGCACAC+TGG + chr4_3:2382901-2382920 None:intergenic 55.0%
CCTCAACCGGGTATTCTGCA+TGG + chr4_3:2385701-2385720 None:intergenic 55.0%
CCATGCAGAATACCCGGTTG+AGG - chr4_3:2385698-2385717 Msa0624470:intron 55.0%
TTCCTTGTGGCAGCGTGTCA+TGG + chr4_3:2386362-2386381 None:intergenic 55.0%
GTCAATTATGCCTCCCCCGA+CGG + chr4_3:2386847-2386866 None:intergenic 55.0%
! GATGCCACAAGGAAGAGCGT+GGG + chr4_3:2386914-2386933 None:intergenic 55.0%
TGATGCCACAAGGAAGAGCG+TGG + chr4_3:2386915-2386934 None:intergenic 55.0%
CGGTGGAGGTAGAAGACATG+AGG - chr4_3:2386960-2386979 Msa0624470:intron 55.0%
GTCGTGAGGCTGCATATCGA+CGG - chr4_3:2387064-2387083 Msa0624470:CDS 55.0%
TATCGACGGCGACAAAACGG+TGG - chr4_3:2387078-2387097 Msa0624470:CDS 55.0%
AGAAGAGCAGAGAGCCCGTA+TGG - chr4_3:2387639-2387658 Msa0624470:CDS 55.0%
GTCCATGACACGCTGCCACA+AGG - chr4_3:2386357-2386376 Msa0624470:intron 60.0%
TTCGTCGGAGACTACAGCGG+TGG - chr4_3:2386943-2386962 Msa0624470:intron 60.0%
GCATTGCCGGACAGACAGAC+TGG + chr4_3:2387610-2387629 None:intergenic 60.0%
AGGCGCAGCAGGCGTCAACA+AGG + chr4_3:2386819-2386838 None:intergenic 65.0%
GTCGGAGACTACAGCGGTGG+AGG - chr4_3:2386946-2386965 Msa0624470:intron 65.0%
CTGCTGCGCCTCAGTGCCGT+CGG - chr4_3:2386828-2386847 Msa0624470:intron 70.0%
TGCTGCGCCTCAGTGCCGTC+GGG - chr4_3:2386829-2386848 Msa0624470:intron 70.0%
! CGACGGCACTGAGGCGCAGC+AGG + chr4_3:2386830-2386849 None:intergenic 75.0%
GCTGCGCCTCAGTGCCGTCG+GGG - chr4_3:2386830-2386849 Msa0624470:intron 75.0%
CTGCGCCTCAGTGCCGTCGG+GGG - chr4_3:2386831-2386850 Msa0624470:intron 75.0%
TGCCTCCCCCGACGGCACTG+AGG + chr4_3:2386839-2386858 None:intergenic 75.0%
! CGCCTCAGTGCCGTCGGGGG+AGG - chr4_3:2386834-2386853 Msa0624470:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 2381563 2387914 2381563 ID=Msa0624470;Name=Msa0624470
chr4_3 mRNA 2381563 2387914 2381563 ID=Msa0624470-mRNA-1;Parent=Msa0624470;Name=Msa0624470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|0.8|0.66|6|411|606
chr4_3 exon 2381563 2381963 2381563 ID=Msa0624470-mRNA-1:exon:635;Parent=Msa0624470-mRNA-1
chr4_3 exon 2383083 2383527 2383083 ID=Msa0624470-mRNA-1:exon:634;Parent=Msa0624470-mRNA-1
chr4_3 exon 2383605 2384373 2383605 ID=Msa0624470-mRNA-1:exon:633;Parent=Msa0624470-mRNA-1
chr4_3 exon 2386982 2387140 2386982 ID=Msa0624470-mRNA-1:exon:632;Parent=Msa0624470-mRNA-1
chr4_3 exon 2387230 2387484 2387230 ID=Msa0624470-mRNA-1:exon:631;Parent=Msa0624470-mRNA-1
chr4_3 exon 2387562 2387914 2387562 ID=Msa0624470-mRNA-1:exon:630;Parent=Msa0624470-mRNA-1
chr4_3 five_prime_UTR 2387765 2387914 2387765 ID=Msa0624470-mRNA-1:five_prime_utr;Parent=Msa0624470-mRNA-1
chr4_3 CDS 2387562 2387764 2387562 ID=Msa0624470-mRNA-1:cds;Parent=Msa0624470-mRNA-1
chr4_3 CDS 2387230 2387484 2387230 ID=Msa0624470-mRNA-1:cds;Parent=Msa0624470-mRNA-1
chr4_3 CDS 2386982 2387140 2386982 ID=Msa0624470-mRNA-1:cds;Parent=Msa0624470-mRNA-1
chr4_3 CDS 2383605 2384373 2383605 ID=Msa0624470-mRNA-1:cds;Parent=Msa0624470-mRNA-1
chr4_3 CDS 2383093 2383527 2383093 ID=Msa0624470-mRNA-1:cds;Parent=Msa0624470-mRNA-1
chr4_3 three_prime_UTR 2383083 2383092 2383083 ID=Msa0624470-mRNA-1:three_prime_utr;Parent=Msa0624470-mRNA-1
chr4_3 three_prime_UTR 2381563 2381963 2381563 ID=Msa0624470-mRNA-1:three_prime_utr;Parent=Msa0624470-mRNA-1
Gene Sequence

>Msa0624470

ATGGAGTCGGAGGAAGTTGCAGCCCTGAATCATCATCACGTTCGAACTTTCATTAAGCGGAATTATCGCAGTTTTGAGGATCATAGGAGTGATGAAGACGAGGACAAGGAGTTTCTTGAAATAATGTATTGGGATGATGAAACAATGATTCGTCCTGGTGTAGGTTTATCATCTGGCACCATTGATATCGGAGACTCACTCTGGACTTACAATTATTCGAGAAAAGGGACACAGTTGAAACTGTCCTTTGGACTTGATCAGAGTAAGCTGGCAACAATCGCTGATGTTCTAGTTACAGCAATTAACCTAAAGGATTCTTCAAAATTGCTTGTCTTAAGTAAAGATGTTACTAAAGGTGGTATTATTAGATGTAATCATCCACAAGTTTGTCAAACTAAAACCGGATTTATGGATCATTCTGGGGCTGTTTCGATCCGGCTTCAGATTCAGGCCAGACCCAATAAGCCTACTATTCATTCTTTCCATCGACATTTTAGACTGCAGTTATACTGGTTTAAGAAGAAAAGGATTGACCAAGTATTTTCTGATGTGATAAAGTCTACAACCACCACATATGACAAGTGCAAGAATGGTGTATCTGATTCTAGATGGGAAAGATATTTGGTAGAGGCTAGTAAGGACTTTTCCCTGAACAAAGATATATTCTGGAAGGGCTTACTGGATCATTGTAAAGGGGACTATTTTCTGGTAGACATTGTTAATTCTGGTTCTAAACTGTTACTCAACGAGAAACCCCCACAACTATCTTTTTTAATCGAAGCTGGTAAAGATGATTTTCACTTAATTGGTAGTTTTGGTGATTTGCTAAGTCACGCTTTACAACTGGCGTACTTGTCTATACAACAGTTAGATGCTGAGAATTTAACCCTTGAACGTGTAAGGGAATTTGAGGAGCGTCTGTTAAAGAATGGCAGCTTTGTTTTCCAATGTTTTTTCATCAACAGTAAATTCAAGCAAAGCTTTCTGCAATATCTGGAACAAGCTGAACCTGATCTAAAAATGGATGATGATGGTAAAAAAAATATTTCTGTTGGTGATGGAAAAGGTGGTAATTCTACTGAAGAGCAACCAGCTGACACTGATTATGCTCATTCAAAACCGAGTGATACTAAACAAGATGAACTCAGTAAATCTCTTCAGGCAATAATGACCTTGTACAATGAATGTTTAAAACCTGTCACGAAGAAGATCCATGCAGAATACCCGGTTGAGGAATTCAGTCGTGAACTAGAAAAGAAGATCTCTGAATGGCACGTTACTGCACAAAAAGATGCTTATTATCAATTTAGAGAGCAGGAGGAGAAGATCAATGATGCTGATTATATTGCTGACCAGGAAAGAAGAAAGTTTGTTTCACGGCCTACTGCCGGAGAAAAAAAAGCAATAAAATCCGAAGAGGAAGCTAGGATAATTGGGGAAATGGGTGAGAAGCATGCACACAAATATTTCACCACCAAATATAAAGGTCCCGAATATAAAGGTCGAAATCTTGTAGTTCGTTGGATGAATGAACATAGAGAAGCCGGACACGCTTACGATTTGTGCGTTTTTGAGAAAAATAAACCCAAGATTTTTATTAAAGTGAAGTCCACCTCTGTGTTAGGAAAAAATTGGTTTCATTTGACACCCAACGAGTATGAATCTGCTAAAGAGAACGAGGAGAATTACATCATTGCACATGTTCATATAAATGAAAATGAGCAAGATGAAACAAAGAAATACACTTTGACTGAATATGTTAATCCTCTTAAAGAAGGCGGTGAACTAAAATTGTCCATGACACGCTGCCACAAGGAATGA

Protein sequence

>Msa0624470

MESEEVAALNHHHVRTFIKRNYRSFEDHRSDEDEDKEFLEIMYWDDETMIRPGVGLSSGTIDIGDSLWTYNYSRKGTQLKLSFGLDQSKLATIADVLVTAINLKDSSKLLVLSKDVTKGGIIRCNHPQVCQTKTGFMDHSGAVSIRLQIQARPNKPTIHSFHRHFRLQLYWFKKKRIDQVFSDVIKSTTTTYDKCKNGVSDSRWERYLVEASKDFSLNKDIFWKGLLDHCKGDYFLVDIVNSGSKLLLNEKPPQLSFLIEAGKDDFHLIGSFGDLLSHALQLAYLSIQQLDAENLTLERVREFEERLLKNGSFVFQCFFINSKFKQSFLQYLEQAEPDLKMDDDGKKNISVGDGKGGNSTEEQPADTDYAHSKPSDTKQDELSKSLQAIMTLYNECLKPVTKKIHAEYPVEEFSRELEKKISEWHVTAQKDAYYQFREQEEKINDADYIADQERRKFVSRPTAGEKKAIKSEEEARIIGEMGEKHAHKYFTTKYKGPEYKGRNLVVRWMNEHREAGHAYDLCVFEKNKPKIFIKVKSTSVLGKNWFHLTPNEYESAKENEENYIIAHVHINENEQDETKKYTLTEYVNPLKEGGELKLSMTRCHKE*