Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393370 | P46287.1 | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 4.56e-130 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393370 | sp|P46287|RL11_MEDSA | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 5.69e-133 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393370 | A0A3Q7K723 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 6.11e-130 | 371 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0393370 | 0.829884 | 4.009751e-55 | -8.615850e-47 |
| Msa0002790 | Msa0393370 | 0.819462 | 1.146923e-52 | -8.615850e-47 |
| Msa0003780 | Msa0393370 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa0024710 | Msa0393370 | 0.803753 | 2.999522e-49 | -8.615850e-47 |
| Msa0027260 | Msa0393370 | 0.866645 | 2.450642e-65 | -8.615850e-47 |
| Msa0035130 | Msa0393370 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
| Msa0040690 | Msa0393370 | 0.843067 | 1.760103e-58 | -8.615850e-47 |
| Msa0047160 | Msa0393370 | 0.822305 | 2.542956e-53 | -8.615850e-47 |
| Msa0048180 | Msa0393370 | 0.836206 | 1.071684e-56 | -8.615850e-47 |
| Msa0049370 | Msa0393370 | 0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0055180 | Msa0393370 | 0.817161 | 3.806802e-52 | -8.615850e-47 |
| Msa0074030 | Msa0393370 | 0.817437 | 3.299847e-52 | -8.615850e-47 |
| Msa0077530 | Msa0393370 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0086750 | Msa0393370 | 0.820403 | 6.988129e-53 | -8.615850e-47 |
| Msa0094470 | Msa0393370 | 0.815179 | 1.055672e-51 | -8.615850e-47 |
| Msa0105370 | Msa0393370 | 0.808309 | 3.299594e-50 | -8.615850e-47 |
| Msa0116670 | Msa0393370 | 0.802332 | 5.899329e-49 | -8.615850e-47 |
| Msa0118710 | Msa0393370 | 0.826209 | 3.076024e-54 | -8.615850e-47 |
| Msa0128860 | Msa0393370 | 0.830989 | 2.151786e-55 | -8.615850e-47 |
| Msa0137990 | Msa0393370 | 0.800866 | 1.178913e-48 | -8.615850e-47 |
| Msa0140820 | Msa0393370 | 0.801099 | 1.056548e-48 | -8.615850e-47 |
| Msa0173530 | Msa0393370 | 0.803730 | 3.032204e-49 | -8.615850e-47 |
| Msa0174730 | Msa0393370 | 0.830970 | 2.175975e-55 | -8.615850e-47 |
| Msa0187930 | Msa0393370 | 0.819516 | 1.114707e-52 | -8.615850e-47 |
| Msa0188350 | Msa0393370 | 0.812967 | 3.247310e-51 | -8.615850e-47 |
| Msa0189300 | Msa0393370 | 0.823705 | 1.199555e-53 | -8.615850e-47 |
| Msa0189700 | Msa0393370 | 0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0194540 | Msa0393370 | 0.812452 | 4.210458e-51 | -8.615850e-47 |
| Msa0202020 | Msa0393370 | 0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa0214550 | Msa0393370 | 0.810489 | 1.124066e-50 | -8.615850e-47 |
| Msa0218830 | Msa0393370 | 0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0231100 | Msa0393370 | 0.819468 | 1.143137e-52 | -8.615850e-47 |
| Msa0231660 | Msa0393370 | 0.801568 | 8.469694e-49 | -8.615850e-47 |
| Msa0232010 | Msa0393370 | 0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0232080 | Msa0393370 | 0.816000 | 6.929744e-52 | -8.615850e-47 |
| Msa0369450 | Msa0393370 | 0.810950 | 8.933369e-51 | -8.615850e-47 |
| Msa0385580 | Msa0393370 | 0.818636 | 1.767289e-52 | -8.615850e-47 |
| Msa0393280 | Msa0393370 | 0.970556 | 8.492189e-132 | -8.615850e-47 |
| Msa0393370 | Msa0395820 | 0.806386 | 8.436685e-50 | -8.615850e-47 |
| Msa0393370 | Msa0443390 | 0.839321 | 1.699330e-57 | -8.615850e-47 |
| Msa0393370 | Msa0497210 | 0.829338 | 5.445004e-55 | -8.615850e-47 |
| Msa0393370 | Msa0526540 | 0.841218 | 5.430131e-58 | -8.615850e-47 |
| Msa0393370 | Msa0527020 | 0.816189 | 6.288077e-52 | -8.615850e-47 |
| Msa0393370 | Msa0527150 | 0.812533 | 4.041473e-51 | -8.615850e-47 |
| Msa0393370 | Msa0531650 | 0.818088 | 2.352634e-52 | -8.615850e-47 |
| Msa0393370 | Msa0571920 | 0.823341 | 1.459310e-53 | -8.615850e-47 |
| Msa0393370 | Msa0576940 | 0.836881 | 7.213600e-57 | -8.615850e-47 |
| Msa0393370 | Msa0581110 | 0.813139 | 2.976738e-51 | -8.615850e-47 |
| Msa0393370 | Msa0586420 | 0.826179 | 3.127242e-54 | -8.615850e-47 |
| Msa0393370 | Msa0588360 | 0.856967 | 2.247929e-62 | -8.615850e-47 |
| Msa0393370 | Msa0615440 | 0.850766 | 1.373532e-60 | -8.615850e-47 |
| Msa0393370 | Msa0615580 | 0.842868 | 1.988390e-58 | -8.615850e-47 |
| Msa0393370 | Msa0621950 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0393370 | Msa0648780 | 0.810933 | 9.006676e-51 | -8.615850e-47 |
| Msa0393370 | Msa0664560 | 0.822184 | 2.713872e-53 | -8.615850e-47 |
| Msa0393370 | Msa0666230 | 0.808069 | 3.712196e-50 | -8.615850e-47 |
| Msa0393370 | Msa0689260 | 0.820966 | 5.186080e-53 | -8.615850e-47 |
| Msa0393370 | Msa0698490 | 0.849615 | 2.887008e-60 | -8.615850e-47 |
| Msa0393370 | Msa0698660 | 0.844875 | 5.764550e-59 | -8.615850e-47 |
| Msa0393370 | Msa0698780 | 0.823362 | 1.442597e-53 | -8.615850e-47 |
| Msa0393370 | Msa0738100 | 0.800254 | 1.571118e-48 | -8.615850e-47 |
| Msa0393370 | Msa0769590 | 0.800649 | 1.305090e-48 | -8.615850e-47 |
| Msa0393370 | Msa0785130 | 0.815123 | 1.086147e-51 | -8.615850e-47 |
| Msa0393370 | Msa0792760 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa0393370 | Msa0806880 | 0.832705 | 8.115828e-56 | -8.615850e-47 |
| Msa0393370 | Msa0817540 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0393370 | Msa0881290 | 0.807035 | 6.153255e-50 | -8.615850e-47 |
| Msa0393370 | Msa0902760 | 0.801496 | 8.761983e-49 | -8.615850e-47 |
| Msa0393370 | Msa0953310 | 0.844301 | 8.229505e-59 | -8.615850e-47 |
| Msa0393370 | Msa0989540 | 0.822577 | 2.199383e-53 | -8.615850e-47 |
| Msa0393370 | Msa1006840 | 0.865660 | 5.026311e-65 | -8.615850e-47 |
| Msa0393370 | Msa1012740 | 0.835727 | 1.418379e-56 | -8.615850e-47 |
| Msa0393370 | Msa1019240 | 0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0393370 | Msa1019260 | 0.836735 | 7.860026e-57 | -8.615850e-47 |
| Msa0393370 | Msa1021520 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0393370 | Msa1043690 | 0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0393370 | Msa1051880 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
| Msa0393370 | Msa1060260 | 0.800388 | 1.475107e-48 | -8.615850e-47 |
| Msa0393370 | Msa1072710 | 0.827815 | 1.270377e-54 | -8.615850e-47 |
| Msa0393370 | Msa1080290 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0393370 | Msa1081930 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0393370 | Msa1093530 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0393370 | Msa1104140 | 0.848098 | 7.608857e-60 | -8.615850e-47 |
| Msa0393370 | Msa1104210 | 0.833959 | 3.950699e-56 | -8.615850e-47 |
| Msa0393370 | Msa1126830 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
| Msa0393370 | Msa1135890 | 0.871825 | 5.086482e-67 | -8.615850e-47 |
| Msa0393370 | Msa1148910 | 0.812956 | 3.266362e-51 | -8.615850e-47 |
| Msa0393370 | Msa1165780 | 0.816364 | 5.746054e-52 | -8.615850e-47 |
| Msa0393370 | Msa1166870 | 0.805392 | 1.364688e-49 | -8.615850e-47 |
| Msa0393370 | Msa1215820 | 0.823245 | 1.536708e-53 | -8.615850e-47 |
| Msa0393370 | Msa1230580 | 0.801729 | 7.848854e-49 | -8.615850e-47 |
| Msa0393370 | Msa1262890 | 0.844922 | 5.600063e-59 | -8.615850e-47 |
| Msa0393370 | Msa1265630 | 0.826604 | 2.476372e-54 | -8.615850e-47 |
| Msa0393370 | Msa1275680 | 0.827176 | 1.807702e-54 | -8.615850e-47 |
| Msa0393370 | Msa1299590 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0393370 | Msa1332590 | 0.807759 | 4.320383e-50 | -8.615850e-47 |
| Msa0393370 | Msa1358250 | 0.820563 | 6.419391e-53 | -8.615850e-47 |
| Msa0393370 | Msa1363330 | 0.845228 | 4.629338e-59 | -8.615850e-47 |
| Msa0393370 | Msa1374120 | 0.822890 | 1.859273e-53 | -8.615850e-47 |
| Msa0393370 | Msa1379760 | 0.825953 | 3.538127e-54 | -8.615850e-47 |
| Msa0393370 | Msa1382620 | 0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0393370 | Msa1386600 | 0.846439 | 2.169984e-59 | -8.615850e-47 |
| Msa0393370 | Msa1387410 | 0.802740 | 4.860409e-49 | -8.615850e-47 |
| Msa0393370 | Msa1392780 | 0.821522 | 3.861360e-53 | -8.615850e-47 |
| Msa0393370 | Msa1394290 | 0.832109 | 1.140007e-55 | -8.615850e-47 |
| Msa0393370 | Msa1413500 | 0.830026 | 3.701901e-55 | -8.615850e-47 |
| Msa0393370 | Msa1427560 | 0.802903 | 4.499060e-49 | -8.615850e-47 |
| Msa0393370 | Msa1432700 | 0.810583 | 1.072594e-50 | -8.615850e-47 |
| Msa0393370 | Msa1447180 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0393370 | Msa1448690 | 0.819932 | 8.956856e-53 | -8.615850e-47 |
| Msa0393370 | Msa1457920 | 0.814709 | 1.341716e-51 | -8.615850e-47 |
| Msa0393370 | Msa1465260 | 0.832055 | 1.175693e-55 | -8.615850e-47 |
| Msa0244780 | Msa0393370 | 0.822491 | 2.302060e-53 | -8.615850e-47 |
| Msa0258390 | Msa0393370 | 0.820680 | 6.036007e-53 | -8.615850e-47 |
| Msa0258850 | Msa0393370 | 0.808705 | 2.716239e-50 | -8.615850e-47 |
| Msa0262480 | Msa0393370 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
| Msa0268130 | Msa0393370 | 0.810763 | 9.806420e-51 | -8.615850e-47 |
| Msa0289580 | Msa0393370 | 0.867859 | 1.002905e-65 | -8.615850e-47 |
| Msa0289610 | Msa0393370 | 0.869663 | 2.616392e-66 | -8.615850e-47 |
| Msa0295460 | Msa0393370 | -0.802607 | 5.178672e-49 | -8.615850e-47 |
| Msa0297610 | Msa0393370 | 0.801644 | 8.168316e-49 | -8.615850e-47 |
| Msa0298200 | Msa0393370 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0298990 | Msa0393370 | 0.821156 | 4.689094e-53 | -8.615850e-47 |
| Msa0300350 | Msa0393370 | 0.812662 | 3.787252e-51 | -8.615850e-47 |
| Msa0327300 | Msa0393370 | 0.826817 | 2.202753e-54 | -8.615850e-47 |
| Msa0327330 | Msa0393370 | 0.815493 | 8.986123e-52 | -8.615850e-47 |
| Msa0335730 | Msa0393370 | 0.806388 | 8.429114e-50 | -8.615850e-47 |
| Msa0336010 | Msa0393370 | 0.833617 | 4.811909e-56 | -8.615850e-47 |
| Msa0357900 | Msa0393370 | 0.850628 | 1.501255e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393370 | MtrunA17_Chr8g0355901 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 5.23e-133 | 369 |
| Msa0393370 | MtrunA17_Chr3g0078591 | 100.000 | 179 | 0 | 0 | 3 | 181 | 4 | 182 | 1.52e-132 | 368 |
| Msa0393370 | MtrunA17_Chr4g0041531 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 4.75e-132 | 367 |
| Msa0393370 | MtrunA17_Chr3g0078581 | 81.818 | 143 | 26 | 0 | 38 | 180 | 2 | 144 | 3.29e-84 | 244 |
| Msa0393370 | MtrunA17_Chr7g0264261 | 88.095 | 42 | 5 | 0 | 1 | 42 | 1 | 42 | 1.33e-18 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393370 | AT2G42740.1 | 96.133 | 181 | 7 | 0 | 1 | 181 | 1 | 181 | 1.87e-129 | 361 |
| Msa0393370 | AT4G18730.1 | 95.580 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 9.59e-129 | 359 |
| Msa0393370 | AT3G58700.1 | 95.580 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 9.59e-129 | 359 |
| Msa0393370 | AT5G45775.2 | 95.580 | 181 | 8 | 0 | 1 | 181 | 1 | 181 | 9.59e-129 | 359 |
| Msa0393370 | AT5G45775.1 | 95.322 | 171 | 8 | 0 | 11 | 181 | 1 | 171 | 1.18e-120 | 338 |
Find 63 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCCTTCCACTGGTATTTA+TGG | 0.136205 | 3_2:-7460147 | Msa0393370:CDS |
| CAATTGCCTGGGACTTGTTT+AGG | 0.246867 | 3_2:+7459983 | None:intergenic |
| CGACAAGGCAATGCAGCTTT+TGG | 0.255810 | 3_2:-7460581 | Msa0393370:CDS |
| TTCAGTGATACCGGATGTTT+TGG | 0.275627 | 3_2:-7460514 | Msa0393370:CDS |
| TATCCAGGAACATATTGATT+TGG | 0.290604 | 3_2:-7460485 | Msa0393370:CDS |
| TGCACTTTGATTTCCCTCAT+TGG | 0.303574 | 3_2:+7461523 | None:intergenic |
| CTCGGGATATGGTGTATACT+AGG | 0.320898 | 3_2:+7462618 | None:intergenic |
| GGCAATTGTTTAGTGAGTTC+AGG | 0.331162 | 3_2:-7459968 | Msa0393370:exon |
| GCATGCTACGTCACTGTTAG+AGG | 0.353505 | 3_2:-7460604 | Msa0393370:CDS |
| ATCCAGGAACATATTGATTT+GGG | 0.366765 | 3_2:-7460484 | Msa0393370:CDS |
| TATGGATTTCTTTGTTGTCT+TGG | 0.372237 | 3_2:-7460124 | Msa0393370:CDS |
| TTTAACTTGGAACCACTTCA+TGG | 0.385179 | 3_2:+7460020 | None:intergenic |
| TTCCCAAATCAATATGTTCC+TGG | 0.396627 | 3_2:+7460482 | None:intergenic |
| TCCGTTCCTTTGGTATTAGA+AGG | 0.399311 | 3_2:-7460639 | Msa0393370:CDS |
| AGAAAATACCTTAGCGGCTC+TGG | 0.400111 | 3_2:+7461453 | None:intergenic |
| TTCCACTGGTATTTATGGTA+TGG | 0.405174 | 3_2:-7460142 | Msa0393370:CDS |
| AGACGGTAACACTCGGGATA+TGG | 0.413441 | 3_2:+7462607 | None:intergenic |
| AAAATACCTTTGGAGAAAAC+AGG | 0.431508 | 3_2:+7461327 | None:intergenic |
| AGGTACACGGTCCGTTCCTT+TGG | 0.433646 | 3_2:-7460649 | Msa0393370:CDS |
| GGAAGGGTATAGTCGTCATT+TGG | 0.447297 | 3_2:-7462665 | Msa0393370:five_prime_UTR |
| ACGAAAGAGAACGGCGCGAG+AGG | 0.462934 | 3_2:+7462583 | None:intergenic |
| TCACACCTTCATATTTAACT+TGG | 0.469248 | 3_2:+7460007 | None:intergenic |
| GAACTCACTAAACAATTGCC+TGG | 0.471736 | 3_2:+7459971 | None:intergenic |
| TTTGTTGTCTTGGAGCGCCC+TGG | 0.474962 | 3_2:-7460114 | Msa0393370:CDS |
| AGTAGCTTAACTTTCTGCAT+TGG | 0.480913 | 3_2:-7459889 | Msa0393370:three_prime_UTR |
| AACAACCAATTCATTCCAAA+TGG | 0.483167 | 3_2:-7462547 | Msa0393370:intron |
| AACATCTCCGTCGGTGAAAG+TGG | 0.484770 | 3_2:-7461487 | Msa0393370:CDS |
| CGACGTCCCACACGATAACC+AGG | 0.485872 | 3_2:+7460096 | None:intergenic |
| CATCCTTTGTGACACGATGT+TGG | 0.510267 | 3_2:+7460046 | None:intergenic |
| AGGAGAAACTTCAGTGATAC+CGG | 0.515104 | 3_2:-7460523 | Msa0393370:CDS |
| TTCATTCCTTCTAATACCAA+AGG | 0.519643 | 3_2:+7460633 | None:intergenic |
| CGTAGGTGCAAGGCAAGAGT+TGG | 0.526727 | 3_2:-7460072 | Msa0393370:CDS |
| TCGTCTCACCAGAGCCGCTA+AGG | 0.538952 | 3_2:-7461461 | Msa0393370:intron |
| GGAGAGCGGTTTGAAGGTCA+AGG | 0.545050 | 3_2:-7460560 | Msa0393370:CDS |
| ATACTGAGAAAATACCTTAG+CGG | 0.552318 | 3_2:+7461447 | None:intergenic |
| GAGCGCCCTGGTTATCGTGT+GGG | 0.552380 | 3_2:-7460102 | Msa0393370:CDS |
| TTCAGGTATGATCCTTCCAC+TGG | 0.557425 | 3_2:-7460156 | Msa0393370:intron |
| AACTCACTAAACAATTGCCT+GGG | 0.561022 | 3_2:+7459972 | None:intergenic |
| GATACCGAAGCCAAAACATC+CGG | 0.566708 | 3_2:+7460504 | None:intergenic |
| TGGTTCCAAGTTAAATATGA+AGG | 0.567557 | 3_2:-7460012 | Msa0393370:CDS |
| TCAAGGAATATGAGCTGTTG+AGG | 0.569136 | 3_2:-7460543 | Msa0393370:CDS |
| GGAGCGCCCTGGTTATCGTG+TGG | 0.572642 | 3_2:-7460103 | Msa0393370:CDS |
| GAGAGGAAGACGGTAACACT+CGG | 0.585806 | 3_2:+7462600 | None:intergenic |
| TAGGTTCTTGAACAGCTAAG+TGG | 0.586306 | 3_2:-7461357 | Msa0393370:CDS |
| TGTGATCCTAAACAAGTCCC+AGG | 0.593737 | 3_2:-7459989 | Msa0393370:CDS |
| TCGGGATATGGTGTATACTA+GGG | 0.598867 | 3_2:+7462619 | None:intergenic |
| AGAACGGCGCGAGAGGAAGA+CGG | 0.603021 | 3_2:+7462590 | None:intergenic |
| GGGACGTCGTCGTAGGTGCA+AGG | 0.607035 | 3_2:-7460082 | Msa0393370:CDS |
| GAAACTGTCTAATCCAATGA+GGG | 0.609459 | 3_2:-7461536 | Msa0393370:CDS |
| ATCGTGTGGGACGTCGTCGT+AGG | 0.611248 | 3_2:-7460089 | Msa0393370:CDS |
| TCCTTCTAATACCAAAGGAA+CGG | 0.611594 | 3_2:+7460638 | None:intergenic |
| CAAAGGATGATGCCATGAAG+TGG | 0.613790 | 3_2:-7460032 | Msa0393370:CDS |
| ATCCATACCATAAATACCAG+TGG | 0.620651 | 3_2:+7460140 | None:intergenic |
| CTTATTGACAGCTAGGTACA+CGG | 0.623398 | 3_2:-7460662 | Msa0393370:intron |
| CTTGTACTCAACATCTCCGT+CGG | 0.623554 | 3_2:-7461496 | Msa0393370:CDS |
| CGTCACTGTTAGAGGCGACA+AGG | 0.626392 | 3_2:-7460596 | Msa0393370:CDS |
| AGAAACTGTCTAATCCAATG+AGG | 0.629710 | 3_2:-7461537 | Msa0393370:CDS |
| ATACCATAAATACCAGTGGA+AGG | 0.634245 | 3_2:+7460144 | None:intergenic |
| AGAGGAAGACGGTAACACTC+GGG | 0.643137 | 3_2:+7462601 | None:intergenic |
| ACGATCTCCACTTTCACCGA+CGG | 0.653039 | 3_2:+7461480 | None:intergenic |
| CTGACAGAAACGAAAGAGAA+CGG | 0.657341 | 3_2:+7462574 | None:intergenic |
| AATCCAACATCGTGTCACAA+AGG | 0.664970 | 3_2:-7460049 | Msa0393370:CDS |
| GACGTCCCACACGATAACCA+GGG | 0.726452 | 3_2:+7460097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAAAAAAATACCTT+TGG | + | chr3_2:7461094-7461113 | None:intergenic | 10.0% |
| !!! | CAAATAACATTAATTTATTT+TGG | - | chr3_2:7461362-7461381 | Msa0393370:intron | 10.0% |
| !!! | AATATTTTTCTTCAAATAAA+AGG | + | chr3_2:7462108-7462127 | None:intergenic | 10.0% |
| !! | TTTATTTGAAGAAAAATATT+CGG | - | chr3_2:7462108-7462127 | Msa0393370:intron | 10.0% |
| !! | ATTACTAAATAGAATAGAAT+AGG | + | chr3_2:7459929-7459948 | None:intergenic | 15.0% |
| !! | TATAATATAATGATCAACAA+TGG | - | chr3_2:7460753-7460772 | Msa0393370:intron | 15.0% |
| !! | CATTATTATTATGTCAATTT+CGG | + | chr3_2:7460837-7460856 | None:intergenic | 15.0% |
| !! | ATTGACATAATAATAATGAT+AGG | - | chr3_2:7460839-7460858 | Msa0393370:intron | 15.0% |
| !!! | AAAATATATGTACAAGTTTT+TGG | + | chr3_2:7461336-7461355 | None:intergenic | 15.0% |
| !! | AAAAAAATATACAAAGCAAA+AGG | + | chr3_2:7462162-7462181 | None:intergenic | 15.0% |
| !!! | CATAATTTTAAACATCAATA+TGG | + | chr3_2:7462231-7462250 | None:intergenic | 15.0% |
| !! | AATGATGCAATTACATAAAT+TGG | + | chr3_2:7459996-7460015 | None:intergenic | 20.0% |
| !!! | ATGTAATTGCATCATTTTTT+AGG | - | chr3_2:7460000-7460019 | Msa0393370:CDS | 20.0% |
| !!! | TGTAATTGCATCATTTTTTA+GGG | - | chr3_2:7460001-7460020 | Msa0393370:CDS | 20.0% |
| !!! | ATCATGTTGATTCTAATAAT+AGG | + | chr3_2:7460070-7460089 | None:intergenic | 20.0% |
| !!! | TATTAGAATCAACATGATTT+TGG | - | chr3_2:7460072-7460091 | Msa0393370:CDS | 20.0% |
| !! | AAACAAACTCTTATTATGTA+TGG | - | chr3_2:7460365-7460384 | Msa0393370:intron | 20.0% |
| !! | AAGATAATTCTATGTTCATT+TGG | + | chr3_2:7460719-7460738 | None:intergenic | 20.0% |
| !!! | TCAATATTTGCTAGTTTTTT+AGG | - | chr3_2:7461304-7461323 | Msa0393370:intron | 20.0% |
| !!! | ATGAAGTAATTTTTTCTTTC+CGG | + | chr3_2:7461399-7461418 | None:intergenic | 20.0% |
| !! | AAGAAAAAATTACTTCATAC+AGG | - | chr3_2:7461401-7461420 | Msa0393370:intron | 20.0% |
| !! | ACTTAGAAATACATATTTCA+AGG | - | chr3_2:7461600-7461619 | Msa0393370:intron | 20.0% |
| !!! | TTTTACCATTTGGAATGAAT+TGG | + | chr3_2:7459869-7459888 | None:intergenic | 25.0% |
| ! | TGCAATTACATAAATTGGAT+TGG | + | chr3_2:7459991-7460010 | None:intergenic | 25.0% |
| !! | TTAAAGTGTTTATCCAAACA+TGG | + | chr3_2:7460141-7460160 | None:intergenic | 25.0% |
| ! | AAACTAATGAAAACACCTTA+TGG | + | chr3_2:7460290-7460309 | None:intergenic | 25.0% |
| !!! | TTGATGGATTTCATATAGTT+TGG | - | chr3_2:7460574-7460593 | Msa0393370:CDS | 25.0% |
| !!! | TGATGGATTTCATATAGTTT+GGG | - | chr3_2:7460575-7460594 | Msa0393370:CDS | 25.0% |
| ! | TTATAGTTTAGGGACTAAAT+AGG | - | chr3_2:7460618-7460637 | Msa0393370:CDS | 25.0% |
| ! | TAGTAATGAAATTGAAAGGA+AGG | + | chr3_2:7461012-7461031 | None:intergenic | 25.0% |
| ! | AGGTTAGTAATGAAATTGAA+AGG | + | chr3_2:7461016-7461035 | None:intergenic | 25.0% |
| !!! | TGAAGTAATTTTTTCTTTCC+GGG | + | chr3_2:7461398-7461417 | None:intergenic | 25.0% |
| ! | ATACTAATGTTGTCAAAAAG+TGG | - | chr3_2:7461471-7461490 | Msa0393370:CDS | 25.0% |
| !! | ATATGTATTTCTAAGTGCAA+CGG | + | chr3_2:7461596-7461615 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCTTATGTTTCAA+AGG | - | chr3_2:7462191-7462210 | Msa0393370:intron | 25.0% |
| !! | GATGTTTAAAATTATGCTTC+AGG | - | chr3_2:7462235-7462254 | Msa0393370:intron | 25.0% |
| AACAACCAATTCATTCCAAA+TGG | - | chr3_2:7459861-7459880 | Msa0393370:three_prime_UTR | 30.0% | |
| !!! | AGAGAATTGGTTTTACCATT+TGG | + | chr3_2:7459879-7459898 | None:intergenic | 30.0% |
| GACTTATTGAGTTTAACTAC+TGG | + | chr3_2:7460340-7460359 | None:intergenic | 30.0% | |
| GATATTGGGGATTAAATTGA+TGG | + | chr3_2:7460536-7460555 | None:intergenic | 30.0% | |
| ! | ATCACTGGTATTGAGATATT+GGG | + | chr3_2:7460550-7460569 | None:intergenic | 30.0% |
| ! | AATCACTGGTATTGAGATAT+TGG | + | chr3_2:7460551-7460570 | None:intergenic | 30.0% |
| AATACCAGTGATTAGATTGA+TGG | - | chr3_2:7460558-7460577 | Msa0393370:CDS | 30.0% | |
| AAATCCATCAATCTAATCAC+TGG | + | chr3_2:7460565-7460584 | None:intergenic | 30.0% | |
| ! | GATGGATTTCATATAGTTTG+GGG | - | chr3_2:7460576-7460595 | Msa0393370:CDS | 30.0% |
| ! | GTTGTTAGTTTAGAGACTAA+TGG | - | chr3_2:7460647-7460666 | Msa0393370:CDS | 30.0% |
| AATGCACAAGTCAATTCTAT+GGG | + | chr3_2:7460783-7460802 | None:intergenic | 30.0% | |
| ATACTGAGAAAATACCTTAG+CGG | + | chr3_2:7460964-7460983 | None:intergenic | 30.0% | |
| ! | ACCTGTTTTATCTTTCTCAT+AGG | - | chr3_2:7461032-7461051 | Msa0393370:intron | 30.0% |
| ACCTATGAGAAAGATAAAAC+AGG | + | chr3_2:7461036-7461055 | None:intergenic | 30.0% | |
| ! | AAAATACCTTTGGAGAAAAC+AGG | + | chr3_2:7461084-7461103 | None:intergenic | 30.0% |
| !!! | TATTTTGGTTGACAAATTCC+CGG | - | chr3_2:7461377-7461396 | Msa0393370:intron | 30.0% |
| ! | GTGTCTTAAAATAGGGTTTT+TGG | - | chr3_2:7461542-7461561 | Msa0393370:CDS | 30.0% |
| GAGTCAAATTCTCATCATTT+AGG | - | chr3_2:7461627-7461646 | Msa0393370:intron | 30.0% | |
| TAGAAAATGAAGAACCAATC+AGG | + | chr3_2:7461721-7461740 | None:intergenic | 30.0% | |
| TTCATTCCTTCTAATACCAA+AGG | + | chr3_2:7461778-7461797 | None:intergenic | 30.0% | |
| ! | TATCCAGGAACATATTGATT+TGG | - | chr3_2:7461923-7461942 | Msa0393370:intron | 30.0% |
| !! | ATCCAGGAACATATTGATTT+GGG | - | chr3_2:7461924-7461943 | Msa0393370:intron | 30.0% |
| GATAAACCACAATTGAACTT+AGG | + | chr3_2:7462077-7462096 | None:intergenic | 30.0% | |
| ! | TATGGATTTCTTTGTTGTCT+TGG | - | chr3_2:7462284-7462303 | Msa0393370:intron | 30.0% |
| TGGTTCCAAGTTAAATATGA+AGG | - | chr3_2:7462396-7462415 | Msa0393370:intron | 30.0% | |
| TCACACCTTCATATTTAACT+TGG | + | chr3_2:7462404-7462423 | None:intergenic | 30.0% | |
| !! | GTATGAATACTACTTTTGAC+TGG | - | chr3_2:7462541-7462560 | Msa0393370:intron | 30.0% |
| GAAGAGAAACGAAAGAGAAT+TGG | + | chr3_2:7459892-7459911 | None:intergenic | 35.0% | |
| !! | TCTCCACATTTTGATCTGTT+TGG | - | chr3_2:7460096-7460115 | Msa0393370:CDS | 35.0% |
| GATCCAAACAGATCAAAATG+TGG | + | chr3_2:7460102-7460121 | None:intergenic | 35.0% | |
| !! | CATTTTGATCTGTTTGGATC+TGG | - | chr3_2:7460102-7460121 | Msa0393370:CDS | 35.0% |
| CAACTTGTAAACATGCCATA+AGG | - | chr3_2:7460272-7460291 | Msa0393370:intron | 35.0% | |
| !! | ATGGATTTTTGTTTCCTTCC+GGG | + | chr3_2:7460517-7460536 | None:intergenic | 35.0% |
| !! | GATGGATTTTTGTTTCCTTC+CGG | + | chr3_2:7460518-7460537 | None:intergenic | 35.0% |
| ! | TCACTGGTATTGAGATATTG+GGG | + | chr3_2:7460549-7460568 | None:intergenic | 35.0% |
| CAATGCACAAGTCAATTCTA+TGG | + | chr3_2:7460784-7460803 | None:intergenic | 35.0% | |
| !! | AATTGACTTGTGCATTGCAT+TGG | - | chr3_2:7460787-7460806 | Msa0393370:intron | 35.0% |
| AGAAACTGTCTAATCCAATG+AGG | - | chr3_2:7460871-7460890 | Msa0393370:intron | 35.0% | |
| GAAACTGTCTAATCCAATGA+GGG | - | chr3_2:7460872-7460891 | Msa0393370:intron | 35.0% | |
| ATGTACAGAACATGTCTACT+AGG | + | chr3_2:7461202-7461221 | None:intergenic | 35.0% | |
| TGCCATGGTGTCTTAAAATA+GGG | - | chr3_2:7461535-7461554 | Msa0393370:CDS | 35.0% | |
| !!! | AACCCTATTTTAAGACACCA+TGG | + | chr3_2:7461540-7461559 | None:intergenic | 35.0% |
| ACAGTTCTTTACATGCGTAT+TGG | - | chr3_2:7461673-7461692 | Msa0393370:intron | 35.0% | |
| TACATGCGTATTGGATATCT+TGG | - | chr3_2:7461682-7461701 | Msa0393370:intron | 35.0% | |
| ACATGCGTATTGGATATCTT+GGG | - | chr3_2:7461683-7461702 | Msa0393370:intron | 35.0% | |
| TATTGTGCTTATTGACAGCT+AGG | - | chr3_2:7461739-7461758 | Msa0393370:intron | 35.0% | |
| TCCTTCTAATACCAAAGGAA+CGG | + | chr3_2:7461773-7461792 | None:intergenic | 35.0% | |
| TTCCCAAATCAATATGTTCC+TGG | + | chr3_2:7461929-7461948 | None:intergenic | 35.0% | |
| ATACCATAAATACCAGTGGA+AGG | + | chr3_2:7462267-7462286 | None:intergenic | 35.0% | |
| TTCCACTGGTATTTATGGTA+TGG | - | chr3_2:7462266-7462285 | Msa0393370:intron | 35.0% | |
| ATCCATACCATAAATACCAG+TGG | + | chr3_2:7462271-7462290 | None:intergenic | 35.0% | |
| !! | TTTAACTTGGAACCACTTCA+TGG | + | chr3_2:7462391-7462410 | None:intergenic | 35.0% |
| AACTCACTAAACAATTGCCT+GGG | + | chr3_2:7462439-7462458 | None:intergenic | 35.0% | |
| AGTAGCTTAACTTTCTGCAT+TGG | - | chr3_2:7462519-7462538 | Msa0393370:intron | 35.0% | |
| TCGGGATATGGTGTATACTA+GGG | + | chr3_2:7459792-7459811 | None:intergenic | 40.0% | |
| CTGACAGAAACGAAAGAGAA+CGG | + | chr3_2:7459837-7459856 | None:intergenic | 40.0% | |
| TGATCTGTTTGGATCTGGTT+TGG | - | chr3_2:7460107-7460126 | Msa0393370:CDS | 40.0% | |
| !! | TTGGATCTGGTTTGGTATCT+AGG | - | chr3_2:7460115-7460134 | Msa0393370:CDS | 40.0% |
| TTTGGTATCTAGGCCATGTT+TGG | - | chr3_2:7460125-7460144 | Msa0393370:CDS | 40.0% | |
| AGTAAACCATCATTCAGTCC+CGG | - | chr3_2:7460496-7460515 | Msa0393370:CDS | 40.0% | |
| TTAGGGACTAAATAGGTGAG+AGG | - | chr3_2:7460625-7460644 | Msa0393370:CDS | 40.0% | |
| GATAGTAAACAAGCAGACGT+TGG | + | chr3_2:7460813-7460832 | None:intergenic | 40.0% | |
| ! | TGCACTTTGATTTCCCTCAT+TGG | + | chr3_2:7460888-7460907 | None:intergenic | 40.0% |
| TAGGTTCTTGAACAGCTAAG+TGG | - | chr3_2:7461051-7461070 | Msa0393370:intron | 40.0% | |
| ! | CAAACACCTGTTTTCTCCAA+AGG | - | chr3_2:7461075-7461094 | Msa0393370:intron | 40.0% |
| AAAGTGGCCATAGAAGATTG+CGG | - | chr3_2:7461487-7461506 | Msa0393370:CDS | 40.0% | |
| !!! | GTGGAGTTTTTTATTGCCAC+CGG | - | chr3_2:7461509-7461528 | Msa0393370:CDS | 40.0% |
| CTGCCATGGTGTCTTAAAAT+AGG | - | chr3_2:7461534-7461553 | Msa0393370:CDS | 40.0% | |
| GGTTGTGTTTGTATCCTGAT+TGG | - | chr3_2:7461704-7461723 | Msa0393370:intron | 40.0% | |
| CTTATTGACAGCTAGGTACA+CGG | - | chr3_2:7461746-7461765 | Msa0393370:intron | 40.0% | |
| TCCGTTCCTTTGGTATTAGA+AGG | - | chr3_2:7461769-7461788 | Msa0393370:intron | 40.0% | |
| TCAAGGAATATGAGCTGTTG+AGG | - | chr3_2:7461865-7461884 | Msa0393370:intron | 40.0% | |
| AGGAGAAACTTCAGTGATAC+CGG | - | chr3_2:7461885-7461904 | Msa0393370:intron | 40.0% | |
| ! | TTCAGTGATACCGGATGTTT+TGG | - | chr3_2:7461894-7461913 | Msa0393370:intron | 40.0% |
| GCTCTACCTAAGTTCAATTG+TGG | - | chr3_2:7462068-7462087 | Msa0393370:intron | 40.0% | |
| GATCCTTCCACTGGTATTTA+TGG | - | chr3_2:7462261-7462280 | Msa0393370:intron | 40.0% | |
| AATCCAACATCGTGTCACAA+AGG | - | chr3_2:7462359-7462378 | Msa0393370:intron | 40.0% | |
| GAACTCACTAAACAATTGCC+TGG | + | chr3_2:7462440-7462459 | None:intergenic | 40.0% | |
| GGCAATTGTTTAGTGAGTTC+AGG | - | chr3_2:7462440-7462459 | Msa0393370:intron | 40.0% | |
| CTCGGGATATGGTGTATACT+AGG | + | chr3_2:7459793-7459812 | None:intergenic | 45.0% | |
| CTTGTACTCAACATCTCCGT+CGG | - | chr3_2:7460912-7460931 | Msa0393370:intron | 45.0% | |
| AGAAAATACCTTAGCGGCTC+TGG | + | chr3_2:7460958-7460977 | None:intergenic | 45.0% | |
| AACTCCACCGCAATCTTCTA+TGG | + | chr3_2:7461497-7461516 | None:intergenic | 45.0% | |
| TTAAGACACCATGGCAGAAC+CGG | + | chr3_2:7461531-7461550 | None:intergenic | 45.0% | |
| !!! | GATACCGGATGTTTTGGCTT+CGG | - | chr3_2:7461900-7461919 | Msa0393370:intron | 45.0% |
| GATACCGAAGCCAAAACATC+CGG | + | chr3_2:7461907-7461926 | None:intergenic | 45.0% | |
| !!! | ATGTTTTGGCTTCGGTATCC+AGG | - | chr3_2:7461908-7461927 | Msa0393370:intron | 45.0% |
| TTCAGGTATGATCCTTCCAC+TGG | - | chr3_2:7462252-7462271 | Msa0393370:intron | 45.0% | |
| CATCCTTTGTGACACGATGT+TGG | + | chr3_2:7462365-7462384 | None:intergenic | 45.0% | |
| CAAAGGATGATGCCATGAAG+TGG | - | chr3_2:7462376-7462395 | Msa0393370:intron | 45.0% | |
| TGTGATCCTAAACAAGTCCC+AGG | - | chr3_2:7462419-7462438 | Msa0393370:intron | 45.0% | |
| ! | CAATTGCCTGGGACTTGTTT+AGG | + | chr3_2:7462428-7462447 | None:intergenic | 45.0% |
| !!! | ATATTTTTTTTTTATAGTTT+AGG | - | chr3_2:7460607-7460626 | Msa0393370:CDS | 5.0% |
| !!! | TATTTTTTTTTTATAGTTTA+GGG | - | chr3_2:7460608-7460627 | Msa0393370:CDS | 5.0% |
| !! | ATAAAAATTAAATAATAGAA+AGG | + | chr3_2:7461136-7461155 | None:intergenic | 5.0% |
| !!! | TTTTATTATATTTTTTTTTC+TGG | - | chr3_2:7461226-7461245 | Msa0393370:intron | 5.0% |
| AGACGGTAACACTCGGGATA+TGG | + | chr3_2:7459804-7459823 | None:intergenic | 50.0% | |
| AGAGGAAGACGGTAACACTC+GGG | + | chr3_2:7459810-7459829 | None:intergenic | 50.0% | |
| GAGAGGAAGACGGTAACACT+CGG | + | chr3_2:7459811-7459830 | None:intergenic | 50.0% | |
| AACCATCATTCAGTCCCGGA+AGG | - | chr3_2:7460500-7460519 | Msa0393370:CDS | 50.0% | |
| TTCCTTCCGGGACTGAATGA+TGG | + | chr3_2:7460505-7460524 | None:intergenic | 50.0% | |
| AACATCTCCGTCGGTGAAAG+TGG | - | chr3_2:7460921-7460940 | Msa0393370:intron | 50.0% | |
| ACGATCTCCACTTTCACCGA+CGG | + | chr3_2:7460931-7460950 | None:intergenic | 50.0% | |
| !! | TGCAACGGATTGCAGAAGAC+GGG | + | chr3_2:7461581-7461600 | None:intergenic | 50.0% |
| !! | GTGCAACGGATTGCAGAAGA+CGG | + | chr3_2:7461582-7461601 | None:intergenic | 50.0% |
| GCATGCTACGTCACTGTTAG+AGG | - | chr3_2:7461804-7461823 | Msa0393370:intron | 50.0% | |
| ! | CGACAAGGCAATGCAGCTTT+TGG | - | chr3_2:7461827-7461846 | Msa0393370:intron | 50.0% |
| !! | GCAATGCAGCTTTTGGAGAG+CGG | - | chr3_2:7461834-7461853 | Msa0393370:intron | 50.0% |
| !! | GCTTTTGGAGAGCGGTTTGA+AGG | - | chr3_2:7461842-7461861 | Msa0393370:intron | 50.0% |
| GTGGCCATAGAAGATTGCGG+TGG | - | chr3_2:7461490-7461509 | Msa0393370:CDS | 55.0% | |
| !! | TATTGCCACCGGTTCTGCCA+TGG | - | chr3_2:7461520-7461539 | Msa0393370:CDS | 55.0% |
| !!! | GGGTTTTTGGCCTTTGCCCA+TGG | - | chr3_2:7461555-7461574 | Msa0393370:intron | 55.0% |
| GATTGCAGAAGACGGGCCAT+GGG | + | chr3_2:7461574-7461593 | None:intergenic | 55.0% | |
| AGGTACACGGTCCGTTCCTT+TGG | - | chr3_2:7461759-7461778 | Msa0393370:intron | 55.0% | |
| CGTCACTGTTAGAGGCGACA+AGG | - | chr3_2:7461812-7461831 | Msa0393370:intron | 55.0% | |
| GGAGAGCGGTTTGAAGGTCA+AGG | - | chr3_2:7461848-7461867 | Msa0393370:intron | 55.0% | |
| ! | TTTGTTGTCTTGGAGCGCCC+TGG | - | chr3_2:7462294-7462313 | Msa0393370:intron | 55.0% |
| GACGTCCCACACGATAACCA+GGG | + | chr3_2:7462314-7462333 | None:intergenic | 55.0% | |
| CGTAGGTGCAAGGCAAGAGT+TGG | - | chr3_2:7462336-7462355 | Msa0393370:intron | 55.0% | |
| AGAACGGCGCGAGAGGAAGA+CGG | + | chr3_2:7459821-7459840 | None:intergenic | 60.0% | |
| ACGAAAGAGAACGGCGCGAG+AGG | + | chr3_2:7459828-7459847 | None:intergenic | 60.0% | |
| TCGTCTCACCAGAGCCGCTA+AGG | - | chr3_2:7460947-7460966 | Msa0393370:intron | 60.0% | |
| AGACACCATGGCAGAACCGG+TGG | + | chr3_2:7461528-7461547 | None:intergenic | 60.0% | |
| AGAAGACGGGCCATGGGCAA+AGG | + | chr3_2:7461568-7461587 | None:intergenic | 60.0% | |
| GGATTGCAGAAGACGGGCCA+TGG | + | chr3_2:7461575-7461594 | None:intergenic | 60.0% | |
| GAGCGCCCTGGTTATCGTGT+GGG | - | chr3_2:7462306-7462325 | Msa0393370:intron | 60.0% | |
| CGACGTCCCACACGATAACC+AGG | + | chr3_2:7462315-7462334 | None:intergenic | 60.0% | |
| ATCGTGTGGGACGTCGTCGT+AGG | - | chr3_2:7462319-7462338 | Msa0393370:intron | 60.0% | |
| ! | GGAGCGCCCTGGTTATCGTG+TGG | - | chr3_2:7462305-7462324 | Msa0393370:intron | 65.0% |
| GGGACGTCGTCGTAGGTGCA+AGG | - | chr3_2:7462326-7462345 | Msa0393370:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 7459746 | 7462684 | 7459746 | ID=Msa0393370;Name=Msa0393370 |
| chr3_2 | mRNA | 7459746 | 7462684 | 7459746 | ID=Msa0393370-mRNA-1;Parent=Msa0393370;Name=Msa0393370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=134|1|1|1|0.75|0.8|5|232|181 |
| chr3_2 | exon | 7459746 | 7460173 | 7459746 | ID=Msa0393370-mRNA-1:exon:1860;Parent=Msa0393370-mRNA-1 |
| chr3_2 | exon | 7460478 | 7460673 | 7460478 | ID=Msa0393370-mRNA-1:exon:1859;Parent=Msa0393370-mRNA-1 |
| chr3_2 | exon | 7461334 | 7461376 | 7461334 | ID=Msa0393370-mRNA-1:exon:1858;Parent=Msa0393370-mRNA-1 |
| chr3_2 | exon | 7461462 | 7461569 | 7461462 | ID=Msa0393370-mRNA-1:exon:1857;Parent=Msa0393370-mRNA-1 |
| chr3_2 | exon | 7462548 | 7462684 | 7462548 | ID=Msa0393370-mRNA-1:exon:1856;Parent=Msa0393370-mRNA-1 |
| chr3_2 | five_prime_UTR | 7462551 | 7462684 | 7462551 | ID=Msa0393370-mRNA-1:five_prime_utr;Parent=Msa0393370-mRNA-1 |
| chr3_2 | CDS | 7462548 | 7462550 | 7462548 | ID=Msa0393370-mRNA-1:cds;Parent=Msa0393370-mRNA-1 |
| chr3_2 | CDS | 7461462 | 7461569 | 7461462 | ID=Msa0393370-mRNA-1:cds;Parent=Msa0393370-mRNA-1 |
| chr3_2 | CDS | 7461334 | 7461376 | 7461334 | ID=Msa0393370-mRNA-1:cds;Parent=Msa0393370-mRNA-1 |
| chr3_2 | CDS | 7460478 | 7460673 | 7460478 | ID=Msa0393370-mRNA-1:cds;Parent=Msa0393370-mRNA-1 |
| chr3_2 | CDS | 7459978 | 7460173 | 7459978 | ID=Msa0393370-mRNA-1:cds;Parent=Msa0393370-mRNA-1 |
| chr3_2 | three_prime_UTR | 7459746 | 7459977 | 7459746 | ID=Msa0393370-mRNA-1:three_prime_utr;Parent=Msa0393370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
