AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88240.t1 MTR_4g053250 96.169 496 12 1 1 496 1 489 0.0 986
MS.gene88240.t1 MTR_2g086420 65.166 511 149 8 1 496 1 497 0.0 622
MS.gene88240.t1 MTR_2g086420 64.971 511 149 8 1 496 1 496 0.0 619
MS.gene88240.t1 MTR_7g089800 48.634 366 158 5 119 468 72 423 1.28e-111 337
MS.gene88240.t1 MTR_7g089800 48.634 366 158 5 119 468 101 452 1.50e-111 338
MS.gene88240.t1 MTR_8g040120 57.732 291 104 3 194 468 179 466 1.58e-111 338
MS.gene88240.t1 MTR_7g092750 54.072 307 120 4 183 468 56 362 9.54e-111 333
MS.gene88240.t1 MTR_7g092750 53.459 318 125 5 174 468 146 463 6.57e-110 334
MS.gene88240.t1 MTR_3g087940 52.297 283 125 2 196 468 79 361 1.81e-103 314
MS.gene88240.t1 MTR_5g054900 52.778 288 123 2 194 468 66 353 7.39e-103 312
MS.gene88240.t1 MTR_5g054900 52.778 288 123 2 194 468 147 434 1.19e-101 312
MS.gene88240.t1 MTR_5g054900 52.083 288 121 3 194 468 66 349 3.65e-99 302
MS.gene88240.t1 MTR_5g054900 52.083 288 121 3 194 468 177 460 1.04e-97 303
MS.gene88240.t1 MTR_7g092750 50.163 307 106 5 183 468 157 437 1.38e-96 299
MS.gene88240.t1 MTR_1g111310 49.333 300 138 2 183 468 408 707 1.13e-93 299
MS.gene88240.t1 MTR_1g111310 49.301 286 139 2 183 462 41 326 2.35e-83 272
MS.gene88240.t1 MTR_0126s0080 41.148 418 171 9 36 421 85 459 5.34e-86 273
MS.gene88240.t1 MTR_8g091650 49.286 280 131 3 199 468 5 283 3.60e-85 264
MS.gene88240.t1 MTR_8g091650 49.117 283 133 3 196 468 75 356 7.96e-85 266
MS.gene88240.t1 MTR_5g060950 49.110 281 133 3 195 465 66 346 4.12e-84 264
MS.gene88240.t1 MTR_8g091650 49.117 283 133 3 196 468 111 392 4.62e-84 265
MS.gene88240.t1 MTR_3g073560 45.079 315 159 4 167 470 38 349 1.44e-80 262
MS.gene88240.t1 MTR_3g044820 50.847 177 72 3 183 344 32 208 4.99e-58 191
MS.gene88240.t1 MTR_1g111320 36.842 171 86 4 93 249 37 199 3.92e-18 83.6
MS.gene88240.t1 MTR_1g090370 33.537 164 92 4 288 450 70 217 3.97e-18 84.0
MS.gene88240.t1 MTR_8g094690 25.316 237 138 5 257 455 12 247 7.64e-16 78.2
MS.gene88240.t1 MTR_7g068860 22.831 219 149 4 256 458 5 219 7.90e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88240.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 534
MS.gene88240.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 534
MS.gene88240.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 534
MS.gene88240.t1 AT1G08320 62.983 362 125 3 138 496 2 357 1.17e-162 465
MS.gene88240.t1 AT1G08320 62.983 362 125 3 138 496 2 357 1.17e-162 465
MS.gene88240.t1 AT5G06839 45.305 426 174 8 69 469 68 459 1.75e-109 333
MS.gene88240.t1 AT5G06839 48.294 381 143 7 129 469 50 416 7.70e-109 330
MS.gene88240.t1 AT5G06950 55.932 295 112 4 189 468 39 330 2.28e-108 325
MS.gene88240.t1 AT5G06950 55.932 295 112 4 189 468 39 330 2.28e-108 325
MS.gene88240.t1 AT5G06950 55.932 295 112 4 189 468 39 330 2.28e-108 325
MS.gene88240.t1 AT5G06950 55.932 295 112 4 189 468 39 330 2.28e-108 325
MS.gene88240.t1 AT5G06950 55.932 295 112 4 189 468 39 330 2.28e-108 325
MS.gene88240.t1 AT3G12250 55.137 292 119 2 189 468 39 330 3.52e-108 325
MS.gene88240.t1 AT3G12250 55.137 292 119 2 189 468 39 330 3.52e-108 325
MS.gene88240.t1 AT3G12250 55.137 292 119 2 189 468 39 330 3.52e-108 325
MS.gene88240.t1 AT3G12250 55.137 292 119 2 189 468 39 330 3.52e-108 325
MS.gene88240.t1 AT3G12250 55.254 295 114 3 189 468 12 303 3.62e-108 324
MS.gene88240.t1 AT3G12250 53.205 312 128 3 172 468 16 324 8.07e-108 324
MS.gene88240.t1 AT5G06839 48.168 382 143 8 129 469 50 417 1.44e-107 327
MS.gene88240.t1 AT3G12250 53.770 305 123 3 179 468 54 355 6.99e-107 322
MS.gene88240.t1 AT5G06960 53.472 288 122 2 193 468 43 330 5.18e-100 304
MS.gene88240.t1 AT5G06960 53.472 288 122 2 193 468 43 330 5.18e-100 304
MS.gene88240.t1 AT5G06960 53.472 288 122 2 193 468 23 310 7.11e-100 303
MS.gene88240.t1 AT1G22070 53.584 293 122 4 190 469 92 383 1.15e-96 297
MS.gene88240.t1 AT1G68640 48.305 354 148 5 132 468 117 452 6.27e-96 298
MS.gene88240.t1 AT5G10030 51.237 283 128 2 196 468 80 362 1.35e-93 289
MS.gene88240.t1 AT5G10030 51.237 283 128 2 196 468 80 362 1.35e-93 289
MS.gene88240.t1 AT5G10030 51.237 283 128 2 196 468 80 362 1.35e-93 289
MS.gene88240.t1 AT5G10030 51.237 283 128 2 196 468 80 362 1.35e-93 289
MS.gene88240.t1 AT5G10030 51.237 283 128 2 196 468 80 362 1.35e-93 289
MS.gene88240.t1 AT1G77920 52.536 276 126 3 196 468 93 366 1.02e-91 284
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 14 296 1.57e-91 281
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT5G65210 50.530 283 130 2 196 468 84 366 3.44e-91 283
MS.gene88240.t1 AT3G14880 27.586 203 126 5 267 450 17 217 2.39e-15 75.9
MS.gene88240.t1 AT3G14880 26.667 210 126 6 267 450 17 224 7.28e-14 71.6
MS.gene88240.t1 AT1G58330 26.966 178 117 4 294 458 46 223 2.37e-12 67.0

Find 110 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGATGTTTCATTGTTAT+TGG 0.193670 4.4:-49170039 MS.gene88240:CDS
TTCGAGCCCTTAGCTCTCTT+TGG 0.224036 4.4:-49169999 MS.gene88240:CDS
AGCCAAAGAATTGGAGAAAT+TGG 0.227335 4.4:-49178140 MS.gene88240:CDS
AACCAATTTCTCCAATTCTT+TGG 0.257495 4.4:+49178138 None:intergenic
TTCACCTTATTAAAGGCATT+TGG 0.259017 4.4:-49172545 MS.gene88240:CDS
CACTTGAAATGTTTCCTTCA+TGG 0.261357 4.4:-49177431 MS.gene88240:CDS
TATTTAATAGGGACTATTCT+TGG 0.280376 4.4:-49175236 MS.gene88240:intron
GGCGGGGCTGCAGGCATCAT+TGG 0.289870 4.4:-49172661 MS.gene88240:CDS
GGAGCTTAGGGCGGGGCTGC+AGG 0.299476 4.4:-49172670 MS.gene88240:CDS
CTATTCTTGGGTTGTGGTGG+TGG 0.320708 4.4:-49175223 MS.gene88240:CDS
TTGAAGGTCTTGTTCAAGAT+TGG 0.333324 4.4:+49175369 None:intergenic
GAAAAGCCGTCTAAGGAAAA+AGG 0.335701 4.4:-49175660 MS.gene88240:intron
CATCTATTTGTTGCTGCGCT+AGG 0.338242 4.4:+49172298 None:intergenic
TCAAGTCAACATGTCCCTTA+TGG 0.339592 4.4:-49178098 MS.gene88240:CDS
GTCCCTTATGGAGTTCTTCA+TGG 0.344846 4.4:-49178086 MS.gene88240:CDS
GAAATTGGTTTGTCTGAATC+TGG 0.352288 4.4:-49178125 MS.gene88240:CDS
CTTGAAATGATGAAGTATTC+AGG 0.362662 4.4:+49172265 None:intergenic
TCACCTTATTAAAGGCATTT+GGG 0.365420 4.4:-49172544 MS.gene88240:CDS
TCGAGCCCTTAGCTCTCTTT+GGG 0.367721 4.4:-49169998 MS.gene88240:CDS
TTGAAGAAACAATACATTAA+GGG 0.369881 4.4:+49178044 None:intergenic
GGAGGAGAAAGTACTGATTC+AGG 0.370655 4.4:-49176838 MS.gene88240:CDS
CTACAACTCTTGGTGTTTGT+TGG 0.374995 4.4:+49177397 None:intergenic
AGCTAGAGTCAAGTAGATTA+AGG 0.378396 4.4:-49175396 MS.gene88240:CDS
AACGTCACATGGCGGAGCTT+AGG 0.380872 4.4:-49172683 MS.gene88240:CDS
ATTGTTATTGGAGAGTATTA+TGG 0.381252 4.4:-49170027 MS.gene88240:CDS
GGTGTTTGTTGGAATCTAAT+TGG 0.381407 4.4:+49177408 None:intergenic
ATCTATTTGTTGCTGCGCTA+GGG 0.382547 4.4:+49172299 None:intergenic
CCTGTGAGCGTGCTCTTTGA+AGG 0.383069 4.4:+49175353 None:intergenic
GAAGAGGCAATTGTTCTTCA+AGG 0.388401 4.4:-49177855 MS.gene88240:CDS
GCGGGGCTGCAGGCATCATT+GGG 0.388702 4.4:-49172660 MS.gene88240:CDS
CTAGCGCAGCAACAAATAGA+TGG 0.389368 4.4:-49172297 MS.gene88240:CDS
AAGCCCAAATGCCTTTAATA+AGG 0.402887 4.4:+49172541 None:intergenic
ATTTAATAGGGACTATTCTT+GGG 0.408206 4.4:-49175235 MS.gene88240:intron
TGTTGTTGTCTTAGGAATCA+AGG 0.409085 4.4:-49177903 MS.gene88240:intron
TAGGGACTATTCTTGGGTTG+TGG 0.414870 4.4:-49175229 MS.gene88240:CDS
CTGCAAAGAAAAGCCGTCTA+AGG 0.419091 4.4:-49175667 MS.gene88240:CDS
CAGATGAAGGGTCTCTCAGC+AGG 0.422559 4.4:+49172516 None:intergenic
ACGTCACATGGCGGAGCTTA+GGG 0.424004 4.4:-49172682 MS.gene88240:CDS
TGATCAGACACTGAGACGTT+TGG 0.430811 4.4:-49175705 MS.gene88240:intron
ACATAGGGAGGTTCAAAATC+AGG 0.436312 4.4:-49176859 MS.gene88240:intron
TGCATGGCTAGCCAAAGAAT+TGG 0.437865 4.4:-49178149 MS.gene88240:CDS
GCAGCAGCTTCAACAGCAAC+AGG 0.443356 4.4:-49176731 MS.gene88240:CDS
CTGCTGAGAGACCCTTCATC+TGG 0.450154 4.4:-49172515 MS.gene88240:CDS
GCCGGAGGGCCTGTCGTTGA+CGG 0.453170 4.4:-49172183 MS.gene88240:CDS
GCAACAAATAGATGGGATAA+TGG 0.454978 4.4:-49172289 MS.gene88240:CDS
ATTCCATGAAGAACTCCATA+AGG 0.455812 4.4:+49178083 None:intergenic
GTAGATGTTGACACAACAAT+TGG 0.464222 4.4:-49172325 MS.gene88240:intron
TTTGCAATTCTGTGGTTGCT+TGG 0.468162 4.4:+49169192 None:intergenic
AGATGGTTGCCGCCATGGCC+AGG 0.469755 4.4:-49172152 MS.gene88240:CDS
ACTGATGATGGCTTAAGAAC+AGG 0.469809 4.4:-49176700 MS.gene88240:CDS
TAAGGGACATGTTGACTTGA+AGG 0.470369 4.4:+49178101 None:intergenic
GCAGAAGAAGCTCTCTCTAA+AGG 0.470527 4.4:-49172243 MS.gene88240:CDS
AACGACAGGCCCTCCGGCGA+TGG 0.470647 4.4:+49172188 None:intergenic
AATTGTAGGCTGATAATTTG+AGG 0.478296 4.4:-49170110 MS.gene88240:intron
CACATGGCGGAGCTTAGGGC+GGG 0.484320 4.4:-49172678 MS.gene88240:CDS
GGACTATTCTTGGGTTGTGG+TGG 0.490197 4.4:-49175226 MS.gene88240:CDS
GCCGTCAACGACAGGCCCTC+CGG 0.490375 4.4:+49172182 None:intergenic
GCAACAGATGGTTGCCGCCA+TGG 0.491703 4.4:-49172157 MS.gene88240:CDS
AACATTTCAAGTGTCGCAGC+TGG 0.494223 4.4:+49177441 None:intergenic
TAACGGCCACCTCCTTCAAT+CGG 0.494670 4.4:+49172580 None:intergenic
TGTTGCATGCCGTCAACGAC+AGG 0.495188 4.4:+49172174 None:intergenic
GTTGTTGTCTTAGGAATCAA+GGG 0.496590 4.4:-49177902 MS.gene88240:intron
AGCCAAATCACATCATGAAA+AGG 0.500783 4.4:-49176653 MS.gene88240:intron
TGGAATCTAATTGGCCATGA+AGG 0.502306 4.4:+49177417 None:intergenic
GTGAGAGAAGCTACAACTCT+TGG 0.508120 4.4:+49177387 None:intergenic
GAAACCACCTATCCAGATGA+AGG 0.514837 4.4:+49172503 None:intergenic
CCAACTATGTCGAATATTGA+CGG 0.527349 4.4:-49170073 MS.gene88240:CDS
CAGGAGACAGCAACTGATGA+TGG 0.528632 4.4:-49176712 MS.gene88240:CDS
ATCAAGATAAGAAATGATGA+AGG 0.535918 4.4:-49177831 MS.gene88240:CDS
AATATTGACGGTTCGTCAAG+CGG 0.542904 4.4:-49170061 MS.gene88240:CDS
ACATAAGGAATGGTCAAAGA+TGG 0.545520 4.4:+49177360 None:intergenic
ACATGGCGGAGCTTAGGGCG+GGG 0.550989 4.4:-49172677 MS.gene88240:CDS
AGCAACCACAGAATTGCAAA+TGG 0.553522 4.4:-49169189 MS.gene88240:CDS
TTGAAGCCCAAAGAGAGCTA+AGG 0.553832 4.4:+49169992 None:intergenic
AGAAAAGACACTTGATCCAA+AGG 0.554531 4.4:-49175921 MS.gene88240:intron
GAGAATGTTTACATAAGGAA+TGG 0.568455 4.4:+49177350 None:intergenic
CCTTCAAAGAGCACGCTCAC+AGG 0.569093 4.4:-49175353 MS.gene88240:intron
TCTATTTGTTGCTGCGCTAG+GGG 0.569490 4.4:+49172300 None:intergenic
ATTGTTGACACCATCGCCGG+AGG 0.572201 4.4:-49172198 MS.gene88240:CDS
CCGTCAATATTCGACATAGT+TGG 0.573495 4.4:+49170073 None:intergenic
TGAAGCCCAAAGAGAGCTAA+GGG 0.583591 4.4:+49169993 None:intergenic
TCACATGGCGGAGCTTAGGG+CGG 0.587205 4.4:-49172679 MS.gene88240:CDS
TAGCGCAGCAACAAATAGAT+GGG 0.590596 4.4:-49172296 MS.gene88240:CDS
TTGTTGACACCATCGCCGGA+GGG 0.591648 4.4:-49172197 MS.gene88240:CDS
GGTATTAGGTCTTACTCTCG+TGG 0.591995 4.4:+49169967 None:intergenic
CTTGAGAAATGACTATGAGA+AGG 0.592625 4.4:+49169161 None:intergenic
ATACATTAAGGGTGATGTTG+AGG 0.596085 4.4:+49178055 None:intergenic
GAGAGACCCTTCATCTGGAT+AGG 0.598499 4.4:-49172510 MS.gene88240:CDS
GCTATTGTTGACACCATCGC+CGG 0.599785 4.4:-49172201 MS.gene88240:CDS
GAATTGAGAGTGATCGTAGA+CGG 0.599938 4.4:-49172630 MS.gene88240:CDS
TTCCATGAAGAACTCCATAA+GGG 0.601892 4.4:+49178084 None:intergenic
AAGATTGGAAATCCTGGCCA+TGG 0.602327 4.4:+49172140 None:intergenic
AGACCCTTCATCTGGATAGG+TGG 0.607670 4.4:-49172507 MS.gene88240:CDS
AGATGAAGGGTCTCTCAGCA+GGG 0.615405 4.4:+49172517 None:intergenic
AGAAGAAGATCAACGTCACA+TGG 0.618075 4.4:-49172694 MS.gene88240:CDS
AAAGAGAGCTAAGGGCTCGA+AGG 0.622342 4.4:+49170001 None:intergenic
CGTTGACGGCATGCAACAGA+TGG 0.625586 4.4:-49172169 MS.gene88240:CDS
TTGAACCATTTGCAATTCTG+TGG 0.626591 4.4:+49169184 None:intergenic
ACATACCGTGATGAGTTCTG+AGG 0.636962 4.4:+49172476 None:intergenic
AAACCACCTATCCAGATGAA+GGG 0.662174 4.4:+49172504 None:intergenic
CATACCGTGATGAGTTCTGA+GGG 0.662424 4.4:+49172477 None:intergenic
TGGTGTCAACAATAGCATTG+TGG 0.671299 4.4:+49172208 None:intergenic
GATGAAGGGTCTCTCAGCAG+GGG 0.672989 4.4:+49172518 None:intergenic
AGGAGCTGCAATGTTTGACA+TGG 0.673799 4.4:-49172733 MS.gene88240:CDS
TAGGGAGGTTCAAAATCAGG+AGG 0.685440 4.4:-49176856 MS.gene88240:CDS
GGTGGTGGCAATATAAGCCC+TGG 0.687235 4.4:-49175208 MS.gene88240:intron
TTGACATGGAGTATGCAAGA+TGG 0.703314 4.4:-49172719 MS.gene88240:CDS
CAGACCCTCAGAACTCATCA+CGG 0.712668 4.4:-49172481 MS.gene88240:intron
ATTGGAAATCCTGGCCATGG+CGG 0.718776 4.4:+49172143 None:intergenic
AGAAGATCAACGTCACATGG+CGG 0.738125 4.4:-49172691 MS.gene88240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.4 gene 49169154 49178168 49169154 ID=MS.gene88240
chr4.4 mRNA 49169154 49178168 49169154 ID=MS.gene88240.t1;Parent=MS.gene88240
chr4.4 exon 49178059 49178168 49178059 ID=MS.gene88240.t1.exon1;Parent=MS.gene88240.t1
chr4.4 CDS 49178059 49178168 49178059 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49177823 49177911 49177823 ID=MS.gene88240.t1.exon2;Parent=MS.gene88240.t1
chr4.4 CDS 49177823 49177911 49177823 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49177362 49177483 49177362 ID=MS.gene88240.t1.exon3;Parent=MS.gene88240.t1
chr4.4 CDS 49177362 49177483 49177362 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49176654 49176875 49176654 ID=MS.gene88240.t1.exon4;Parent=MS.gene88240.t1
chr4.4 CDS 49176654 49176875 49176654 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49175922 49175966 49175922 ID=MS.gene88240.t1.exon5;Parent=MS.gene88240.t1
chr4.4 CDS 49175922 49175966 49175922 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49175661 49175720 49175661 ID=MS.gene88240.t1.exon6;Parent=MS.gene88240.t1
chr4.4 CDS 49175661 49175720 49175661 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49175354 49175431 49175354 ID=MS.gene88240.t1.exon7;Parent=MS.gene88240.t1
chr4.4 CDS 49175354 49175431 49175354 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49175209 49175248 49175209 ID=MS.gene88240.t1.exon8;Parent=MS.gene88240.t1
chr4.4 CDS 49175209 49175248 49175209 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49172482 49172753 49172482 ID=MS.gene88240.t1.exon9;Parent=MS.gene88240.t1
chr4.4 CDS 49172482 49172753 49172482 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49172122 49172343 49172122 ID=MS.gene88240.t1.exon10;Parent=MS.gene88240.t1
chr4.4 CDS 49172122 49172343 49172122 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49169982 49170124 49169982 ID=MS.gene88240.t1.exon11;Parent=MS.gene88240.t1
chr4.4 CDS 49169982 49170124 49169982 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
chr4.4 exon 49169154 49169241 49169154 ID=MS.gene88240.t1.exon12;Parent=MS.gene88240.t1
chr4.4 CDS 49169154 49169241 49169154 ID=cds.MS.gene88240.t1;Parent=MS.gene88240.t1
Gene Sequence

>MS.gene88240

ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTGTCTGAATCTGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATCACTACCTCAACATCACCCTTAATGTATTGTTTCTTCAATAATTTCTCCATCTTAGTGCTACTAACACTTATACTTTTTTATTATCAAACATAATATATTCTTTCTTAAATTATTTTTTTGATAAAGTTGCTTTAATTCAATTTCTTCATTTATTTTTGTTGTTGTCTTAGGAATCAAGGGTCTGCTTTTAATTTTGGAGAGCTAGAAGAGGCAATTGTTCTTCAAGGAATCAAGATAAGAAATGATGAAGGAAAAGCATGTATGGTTTTTTTTTTCTTTCTTCTCTTCCTTTTTCCATGGTTTTTTTATTTATTTATTTATTCTTCATGTTACATAAGCATAAACCAACTCTTTCCAAAAAGCATATAGAAGAAAAAAGAGTGTTGGAAGAAAAAAAGTTTTGAGTAGGAAAAGTTACCATTTTGAGTAGAATAATGATGATGAAGCAATAAAACTAACTTCCCTTGCATGACTCCAAAAGAAGGATTAGGTTTCATCCACCTTTTGATATTGATATATAATTGAAAATTTCATATAGTTCTATATTATTATTTGGTTATTATGTTTTGAGATTTTTGTTTTTGTGATTTTCTTGCAGCTGCTTTATATACAAGCAAACCAGCTGCGACACTTGAAATGTTTCCTTCATGGCCAATTAGATTCCAACAAACACCAAGAGTTGTAGCTTCTCTCACTTCTCCATCTTTGACCATTCCTTATGTAAACATTCTCATTCTTTACACCTAACAACTTTTAGTACTACTACTTCAAATCAATAAAATATCAATTTTTTCCTTGCTTCTGTTGTCCGTTTGAATCGACAACAAGTTTGACAAAATCACATGTTAAAACTTCGAAGTGTAGTAATCATAAAATTGTGATAGCACATCGTGATTCAATCAAACTTACAGCTAATTCAATCATGCACTAAATTTAGACGTCAAAACAAGTCTAATATTATTTTAACATATGAAGTACAGATACTTCTCATATTAGACGTGTCCTGGTGTCAGATATGTATCATGTTCGACATCGATACATATGATTATATTGAATTATGTAATTTTCTCAAATTATTATCAGTGTCGACGTGTCCGTGTCTGTGCTTCATTTTAACAAATATTTTGCAAAAAGGAATGTAAAAAATAATGAAATTTTGGTCTTGGACATGAAAATGAGGTTTTTTTGGTGTATTTTGAAACATAGGGAGGTTCAAAATCAGGAGGAGAAAGTACTGATTCAGGATCAACAGAGCTACAATTTGAAACTGATTCTCCAATAAGTGCAAAAGCATCTTCTTCAGATCATCATAATCATGCTTTTGATCAGCAGCAGCTTCAACAGCAACAGGAGACAGCAACTGATGATGGCTTAAGAACAGGCACATCAACACAGAATCAATCAAAAGCCAAATCACATCATGAAAAGGTTTTGTTAATTTAATGTACTCTTTGTTTTTCACTGTTGTTTAGTTAATCTCTCTCTCTTTTTGTCTCCTAAACCAAGACAATGCTTGGTCTCTTTAATGCAATTATTAACTCTCTCTCTGCACAAAAGAACAACACAGATCCCAACAACTCTCAGAAAATGAAGATAACACTGAGTTTTTCTGATGAATCTCTGACATGAAATATGGAAGGAGAGAGAGAGAGAGAGATATATGAACATGTAAAAAGAAAACAAAGGGAGAGAATCTTCTAAGTCATTATCAATGTGACCCTTTTTTATTAATTTTAACTAACATACACCTACTTCACTTGTGTTTTAATCCAAGTAAATTAAATTTACTATCCATGTCATATTGATGAGTACATTTGCATGGCTCCTCAAGAAATGTTTCCTTAAAATGCTGTGACCACTTAACATTCATATAATAATATTAATCTAGCATTATTTATTGGTTGAGACTTGATGAAGTGAATCTAATATCTTTATGAGTTTGAATTTGAGTTATGATAGTTAGCAAATTAATTCATCACCCCATATAATTTATTTAGTTCTTAGAAAGCTGAGTTATTGCTATGAGTACATTTTTTTTAGTGCGATGTTGCCCTATATGAAATAATAATATATAGTAATCCATATTAATTTCTCTTGTGGTTGTTTTTATTGCAGAAGAAAGGAGCTGTTTCCACATCAGAAAAGACACTTGATCCAAAGGTTTTATTTTAAATATCATAATAATTCATACATACATTTTTTTTTTTGAAACAATAATTCATACATACATGTTTATCTATAAGATAACATATAATATATATTCCCCTAAAAAAATATAATATATATTCTAAGGTATCTTTTTTTTTACCATTAATTAAGAGGTAAGTATAGTCAAGAATTAATTGTTTGATTTGTGATCAGACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGCCGTCTAAGGAAAAAGGTGTGTGTTCCATTACACTTTGTGCAGTACCACCCACAAATACTATTATTCATCTTAATTATTATAAGCCATTACAATTTTTTTTTGTTGAAAGAACTCTAAGTTATTACAATGTTATGTTGAGCTTTGCATATATTATAATGAAACGTGTACTATATATGAAATTAATTAATATTATGGATGGTGTGTGTATCTTTTTATTAATTAACTTTATTTATTAATGAAACAGGCTTATGTACAGCAGCTAGAGTCAAGTAGATTAAGGCTATCCAATCTTGAACAAGACCTTCAAAGAGCACGCTCACAGGTATACTCATAAATTTGAAAATTTAAAATTACAGCATAAAGATTTTATTAAGTACTTTTCTATAGTCATGATTATTATTATAATTTATGGTGTTTTATTTAATAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCTGGTAAGTTTTGCTCTTTTTATTGATTTTCAAAATACAGTTTCACTTTCTAACGAGGCTTACATAGCATACTGTTATCTTTGGTGTCTATATTCTTAATGTATGTTTGGTATTATAGAGGGTCATGTGATTCTCTTATATGTATCGTGATACCAAACACATGTTCAAAATATTATTGAACACGAGCAAACTAGCACAAAATTTAGACTTTAAAATTTACGGATGCTATGGTGATTTATTCAAACCAACTTGTATTTAAATATGTACTAACTAAGTTCTTAGGTTCTCCGTTGAATGTCTCAACCTCAATTTGAAGTGAGTGAACATAGTTTTCAAGATATTTAGTTTATCGTTTAATATTTTCTAATTATACAAAGATATTAAGCAAGAACAAAACAATTCTTAATAATCGAGTTCATGCAATGACCCATGAACCAAGCAGGGGCGGATCCAGACTTTAGGTATATGTGGAGCTAAAATTTCAAATAAATAATAAAGCAAACTAAATGAATTTTTTTTAATCGACAAATATTATTCACATCGAGATTGTGTAAGAAACACAAAAACTCGCAGATCAAATAGTCTAACATACCTCATTGTTTGCACTTATTTGTTTCCACAAGTTTTGCATAAATATCTGAAAGCCCTTTCAACTTAGCAAATTTTGGGTCAGATAGAACATTTGTAACATAATTCTTAAGTTGAGTGTGTAACGTCACTTCCGACACATCTATAAAATCATTTGGATAAAACTCAATAATCCTCAATAATTCTTTCACATCAAAAGTTGCAAATGACTTTGCGGAACTAAGGGGAAAGGAGAAAAGAGAGAGTTATTTAACAAGTCACTTCTTTTATGTTTTATCAATTATAACAAAAAAAAAGGAAAAAACATGTGGAGCTATAGCTCCACATATCTCCTAAGTGGATCCGCCCCTGGACCCAAGAGAACGTAGTTGGGTCAAGTGTTATAAGGATTGTGAGTTCCACCTGTTATCGAGTCATCATTTTTTAGAAGGGTTTTGATAAATTTATTAATGATGAGTCATCAATTAATTAAAATATGTCAAATCTATACATAAAAACTTAGAGATGGAATCACTATCAAGATTTGTAAGAATTAAAGGGTTTTAGAGTAGCTTAGTCTTAGTTATAGGCTATTCTAAAACCATTTTATTTTTGCATACCCTTGGTAGTGACTGCATTAACTTGTTTATTATTTATAGCTTTGATGGTTCTGATTGACAAATAACTCATCTATAATGTAACTACTAAGATCTTCTACCAAATGGTGTCTCATCAACTAATGAGATTCAGAATTTTAAAACACCGGAACTAAGTACATTCGTTCAATCTCATCTTGGATCATTATAGTTCACCACTACGAGTAGTGTTTGTGGAAATTAAAATGAAAATCAGTCATTTAAGTTTTTTATAAATCAACAAATTTCAAATTTTATTTAAACGTGACACCTGAGGAAACATAACCCGATTACAAATAAGGCACTGTATATATGCGGTATACCTCAAAAGAGAACACAAAAAACCATACAATATCCACCACCAATGGCCATTGTGCCTTTCATCCAGAACAATATCCACCACCAACGGACATTGCGCCTTTCATCGGGGAAAACACATAACCGAAGTGCTGCAGAAAAAAGAACAGCAGCAACCCAACACAACAGAACAACAAATAAAACGCCACCCAGCCAACCTTAAAAATGTCAAAACAGGTTTACATAAAAAAGTTGACCTCTAAACTGCGGCTCCCTTGCCCGTCATCTTTCATAACCATTCATCAGATTGATTCCAACACCAATCAAAATACAAACACGTTAGAATTTTAAGTCTGCTCAAACTCCAACACCAAGATAACACCTTAATTTCCTCCGGTATATGATAAAGAAAAGTGCAATTAACAATCTAAAAAGATAAAGAAAAGTCCAATTTTGAATGATTTTTTATAACGGTTCTCATCAATCTAAAATAAAATGTGTGAGAAAATAGTTATGATCAATTAACATATTCTTGTTCTAGTTTCTCTTATTTTAAAAATATTGATATGTTACATGCCTTAAAAAATAAGACAACTCTTTGTAGAGATTGTACATAAAGCCTAAAATCTAGTTTTTATAAATAAACGATAAATGGAGTAAATTTGGACTCAACTTATGTATGCTTCAACTTTTCAACAGATTATTGACATGGTATCTATAATTTCATCTCTAATTTTTTATTTCATCATTAACTTTTATTGTTTCAACGTATGAAGTAAAATACAAAATTCGTCTCTTATTCAATCACCAAGTGTTAGAAATGGAAAATTTGATAATCAAATCCATTTTTAATTTTCCTCTAAAAAAACTCAATTTTTAATTAGTTAGCTATAGCAACTAGTTCCAAGTGTAAGTGTGTTATTTTCCTTGGTACAATAAAATCTTTATTGTTGTTGCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTAGAAGAAGATCAACGTCACATGGCGGAGCTTAGGGCGGGGCTGCAGGCATCATTGGGAGATAATGAATTGAGAGTGATCGTAGACGGATATCTTTATCATTACGACGAGCTTTTCCGATTGAAGGAGGTGGCCGTTAAATCAGATGTTTTTCACCTTATTAAAGGCATTTGGGCTTCCCCTGCTGAGAGACCCTTCATCTGGATAGGTGGTTTCAGACCCTCAGAACTCATCACGGTATGTATCTATGCATTCACATTGATATAAATGTATTATATGATATGATTTTAATACTCAATGTATAATAATATGATAATTTTCTTAGATTTTTTGCCAAGTTTAATGGAATGATTAATTATTATTTTTTTTGGGTAGATGTTGACACAACAATTGGAGCCCCTAGCGCAGCAACAAATAGATGGGATAATGGACCTGAATACTTCATCATTTCAAGCAGAAGAAGCTCTCTCTAAAGGTCATGAACAGCTCCACAATGCTATTGTTGACACCATCGCCGGAGGGCCTGTCGTTGACGGCATGCAACAGATGGTTGCCGCCATGGCCAGGATTTCCAATCTTGAAAAATTTGTTCATGAGGTAAACAATTTATATCTATAATGAGTTCAGATATACATATTAATTGTAACCCTAAGTCTTCCTAACATATACCTAAAAAAATGGTTTCAAAAGTGAACCAAACTATTTTTATTGAAGAGCAATGATATATGAACAACCATTAATAGACAACTTTCATGACAACTTCATTTTCCTCTATTTCTATTGGTTGAAAATAAAAGAGAGAGAAAAAGTAAGAGAGAGAATAAAAACATATTGTGAGTATGAGAGAGAAAGTTGTCAAAAAGTTGTTGGCAAATGGTTGTCAAAATATCATTTCTCTTTATTGAAACATCATATCATATACTTTTTGACATCACATTTTTAAGGATCTCAAATTTTAAGGATCTCAAATTTCTCTAGGAGAAAAAAAGATCATCTCAAATTATTTAACATGTATAAATGCCACACATTAATTAATTAAAAACTGTAATATGAGATATGTCATAATTCTAATAGCTGAAATGTTACTTTTTAGTCCAATCAAAATGTTTCCTTTGCTCATTCTTCTATCCAACATACATGCATGTTTGCGCCGCAATTCTACCTTGTCTTTTTACGTTTTACAACTTGTGATTACCTCATATAAATATAAGTGTTAAATATGTTTTTGGTCCCTATAAATATGTCCACTTTTCGTTTTAGTCCCTCTAAAATTTTCCTTCAACTTTTAGTCCCTATAAAATTTTCAATAACTACTTTTGGTCCCTATTTTTAATTTAATTTTTGTATTTTTTAATGAAATTGTGCAGAAATGTGTAAAATATTCTAAAACAATTTCCTGAAAAAAATTAGAATTTTTTAACAAAACACAAATTAAATATGAATTTTTAACCCTAAAAAATATAAAAAATTATATTAAATTCATGTTTTGTTAAAAAATTCTAAATTTTTTTTGGAGTGATTCTTATAATATTTTGAATTTTTCTGGAAAATTTTATTAAAAAATATTAATTCTACATATGAGTTTACTTTAAAAGAGGGACCAAAAGTAAAGATTGAAAATTTTATAGGGACTAAAAGTTGAAGGAAAATTTTAAAGGGACTAAAACGAAAAGTTAACATATTTATAGGGACCAAAAACATATTTAACCCTAAATATAAATATATATATATATATATATATATATATATATATATATATATTTATATTAAGTCAAAGTTTGTTTATATAATACTAATAATATACCAATCCTTACACATTTGTCAGCAGTTTAATATCTGCATTTAGTTTAAAATCGATCTATCTATATATTGCAATTTGCAACAAGCTATGATCAAAGTAATTTATTCAATATGATTAAACTGACAATTTCTTTTAAATAACTTGTTTGACTTTAAATGTACCTACTACTTGTTTGACATGTACGTTTTTTTTGTTTTGTTTTCAAACAAGACATGTACGTCTTTGTAAGATTCGTTAATTATTTCATTAATTAATATTGTCAATTTTTGGAGACTTTAGTTTATTATTGCTAGGTTATATCTAGCTACTAAGTGCATGAATGTTAATCAAAACATTGAGTGCCAGGTATTTTATGTAATTTTTCTATCTTAAAATGTTTCAATCAAAAGTTGGTATAAGATAGAGATGGCTGGATCGATGTATATAATAACACTAGGCATACTTATAATCATCAAGATTTTAATTAAAAACCAAATTGACAAATGATTTCACATTAATTAAATTCCAGTAATTTATAAGTTAAAAACTATATTATATCATGATATTTAAATGTATTCGAATCAGTCTAAGATAAACTCATCAAATTCAACCCCTTTGATAGCATCATGTTCTTGGCCATATGTGTTAGTCCTAGATTAGGGACCCATTCATAGGGTTCGATTATTCTACTTTTATATTAATTTTATACTTGATTATTGTTTTCTAAACTTAATTGTCTTCTTGCTTAAGTATTATTAGCTAATTATTTCTCACTCAATTATTTATATATTTCATGTTTCTAAATTAATTGTAGGCTGATAATTTGAGGCAACAAACTCTTCACCAACTATGTCGAATATTGACGGTTCGTCAAGCGGCAAGATGTTTCATTGTTATTGGAGAGTATTATGGACGCCTTCGAGCCCTTAGCTCTCTTTGGGCTTCAAGACCACGAGAGTAAGACCTAATACCAACTATCGAGTATTAAATGATTTTCCCTAAAAAAAACTATTAAATGATTTGATCAAAAAGAAAAAACTATTATATGTGTATTGGTACTTATGTTTTACAGAGAAAGTTTATCTATATTAAAATTATTATTAGACCTCTATAATTTTTATTTTATCAATGAACAATTAATATTCACACACTATGAAAAACACTTAATAATTATGTTTAACATCATACATAATATTATTTGTAATTTTTTTACCTTATAAATTGTTTACCCTAATTGTATATCAAAATTAAACTCACTTTACAGAAAAAAATAAATAAAATCATTTTTTAATCACAATAATATAGAGTTTCTCTATAATTCTCTCATTAATTAATTTTATGAAAATAGAGTTGTAATTTTAAAAAATTAATAATAGTCAATATTTTTTTAGTTTTTTAAAGCACACGACAAAATGAATAAAAACAATTTAAATTTTGAAAAAAAAGAGAGACTTATAACAAGATGATAATAAAAAAGAATGAAGATTTCAATATCTTCATCGCATTAGCATGTATATAACTGAATTAGTCAAAATATATGAAGCTTTCTTTTGCCACATGATTCAACTTTCAACAATTAAGCTTAATCATACGTGTATGTAAATGAACGAAAATTAAAATGAAAATTAACTTTCATATCTGCTCCATTGAAAACATTAAAAAAGTGACATCTATTAATTACTTTTGTACTTGAACAGGAACATGATCAATGATGATAACTCATGCCAAGCAACCACAGAATTGCAAATGGTTCAACCTTCTCATAGTCATTTCTCAAGTTTCTGA

Protein sequence

>MS.gene88240.t1

MASQRIGEIGLSESGPSSQHVPYGVLHGITTSTSPLMNQGSAFNFGELEEAIVLQGIKIRNDEGKASALYTSKPAATLEMFPSWPIRFQQTPRVVASLTSPSLTIPYGGSKSGGESTDSGSTELQFETDSPISAKASSSDHHNHAFDQQQLQQQQETATDDGLRTGTSTQNQSKAKSHHEKKKGAVSTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRHMAELRAGLQASLGDNELRVIVDGYLYHYDELFRLKEVAVKSDVFHLIKGIWASPAERPFIWIGGFRPSELITMLTQQLEPLAQQQIDGIMDLNTSSFQAEEALSKGHEQLHNAIVDTIAGGPVVDGMQQMVAAMARISNLEKFVHEADNLRQQTLHQLCRILTVRQAARCFIVIGEYYGRLRALSSLWASRPRENMINDDNSCQATTELQMVQPSHSHFSSF