Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08305.t1 | RHN42401.1 | 98.1 | 364 | 7 | 0 | 2 | 365 | 1 | 364 | 5.70E-199 | 703.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08305.t1 | Q9LRR9 | 74.5 | 365 | 90 | 1 | 4 | 365 | 3 | 367 | 5.2e-153 | 542.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08305.t1 | A0A396GQE5 | 98.1 | 364 | 7 | 0 | 2 | 365 | 1 | 364 | 4.1e-199 | 703.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene08305 | 0.831295 | 1.81E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene08305 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene08305 | 0.823693 | 1.21E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene08305 | 0.842204 | 2.98E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene08305 | 0.850392 | 1.75E-60 | -1.69E-46 |
| MS.gene049232 | MS.gene08305 | 0.845167 | 4.81E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene08305 | 0.846369 | 2.27E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene08305 | 0.85184 | 6.83E-61 | -1.69E-46 |
| MS.gene049356 | MS.gene08305 | 0.851282 | 9.83E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene08305 | 0.874716 | 5.44E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene08305 | 0.870104 | 1.88E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene08305 | 0.833064 | 6.61E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene08305 | 0.836323 | 1.00E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene08305 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene08305 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene08305 | 0.871743 | 5.42E-67 | -1.69E-46 |
| MS.gene049907 | MS.gene08305 | 0.808139 | 3.59E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene08305 | 0.807542 | 4.81E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene08305 | 0.838536 | 2.71E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene08305 | 0.820399 | 7.00E-53 | -1.69E-46 |
| MS.gene050216 | MS.gene08305 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene08305 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene08305 | 0.824128 | 9.55E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene08305 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene08305 | 0.834236 | 3.37E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene08305 | 0.834608 | 2.72E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene08305 | 0.802397 | 5.72E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene08305 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene08305 | 0.808827 | 2.56E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene08305 | 0.813314 | 2.73E-51 | -1.69E-46 |
| MS.gene050647 | MS.gene08305 | -0.801381 | 9.25E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene08305 | 0.812505 | 4.10E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene08305 | 0.807121 | 5.90E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene08305 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene050686 | MS.gene08305 | 0.832206 | 1.08E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene08305 | 0.850569 | 1.56E-60 | -1.69E-46 |
| MS.gene050767 | MS.gene08305 | 0.824327 | 8.57E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene08305 | 0.824604 | 7.38E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene08305 | 0.864555 | 1.12E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene08305 | 0.850064 | 2.16E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene08305 | 0.82424 | 8.98E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene08305 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene08305 | 0.840025 | 1.11E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene08305 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene08305 | 0.827672 | 1.37E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene08305 | 0.831818 | 1.35E-55 | -1.69E-46 |
| MS.gene05118 | MS.gene08305 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene08305 | 0.829167 | 5.99E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene08305 | 0.806926 | 6.49E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene08305 | 0.84875 | 5.02E-60 | -1.69E-46 |
| MS.gene051551 | MS.gene08305 | 0.818295 | 2.11E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene08305 | 0.876154 | 1.75E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene08305 | 0.824012 | 1.02E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene08305 | 0.80753 | 4.83E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene08305 | 0.8175 | 3.19E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene08305 | 0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene08305 | 0.856214 | 3.74E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene08305 | 0.869108 | 3.96E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene08305 | 0.801999 | 6.91E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene08305 | 0.826977 | 2.02E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene08305 | 0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene08305 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene08305 | 0.863858 | 1.84E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene08305 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene052503 | MS.gene08305 | 0.803181 | 3.94E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene08305 | 0.820624 | 6.22E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene08305 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene08305 | 0.81735 | 3.45E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene08305 | 0.848237 | 6.97E-60 | -1.69E-46 |
| MS.gene053018 | MS.gene08305 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene08305 | 0.830139 | 3.47E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene08305 | 0.843292 | 1.53E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene08305 | 0.802437 | 5.61E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene08305 | 0.808227 | 3.43E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene08305 | 0.844946 | 5.52E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene08305 | 0.83965 | 1.40E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene08305 | 0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene08305 | 0.820512 | 6.59E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene08305 | 0.810097 | 1.37E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene08305 | 0.879704 | 1.00E-69 | -1.69E-46 |
| MS.gene053626 | MS.gene08305 | 0.875645 | 2.62E-68 | -1.69E-46 |
| MS.gene053632 | MS.gene08305 | 0.855037 | 8.25E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene08305 | 0.833678 | 4.65E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene08305 | 0.826807 | 2.22E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene08305 | 0.854653 | 1.07E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene08305 | 0.895171 | 1.23E-75 | -1.69E-46 |
| MS.gene054003 | MS.gene08305 | 0.82967 | 4.52E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene08305 | 0.824138 | 9.50E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene08305 | 0.831675 | 1.46E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene08305 | 0.805976 | 1.03E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene08305 | 0.862202 | 5.99E-64 | -1.69E-46 |
| MS.gene054927 | MS.gene08305 | 0.814516 | 1.48E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene08305 | 0.824768 | 6.75E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene08305 | 0.885951 | 5.22E-72 | -1.69E-46 |
| MS.gene055212 | MS.gene08305 | 0.800333 | 1.51E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene08305 | 0.826404 | 2.76E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene08305 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene08305 | 0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene055397 | MS.gene08305 | 0.83098 | 2.16E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene08305 | 0.815432 | 9.27E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene08305 | 0.83366 | 4.69E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene08305 | 0.819565 | 1.09E-52 | -1.69E-46 |
| MS.gene055629 | MS.gene08305 | 0.807172 | 5.75E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene08305 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene08305 | 0.862049 | 6.67E-64 | -1.69E-46 |
| MS.gene055748 | MS.gene08305 | 0.810164 | 1.32E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene08305 | 0.821481 | 3.95E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene08305 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene055802 | MS.gene08305 | 0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene08305 | 0.824588 | 7.44E-54 | -1.69E-46 |
| MS.gene055911 | MS.gene08305 | 0.821586 | 3.73E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene08305 | 0.847153 | 1.38E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene08305 | 0.830561 | 2.74E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene08305 | 0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene08305 | 0.830057 | 3.64E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene08305 | 0.827893 | 1.22E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene08305 | 0.878505 | 2.66E-69 | -1.69E-46 |
| MS.gene056448 | MS.gene08305 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene08305 | 0.826155 | 3.17E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene08305 | 0.818594 | 1.81E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene08305 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene08305 | 0.844532 | 7.13E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene08305 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene08305 | 0.850096 | 2.12E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene08305 | 0.851728 | 7.35E-61 | -1.69E-46 |
| MS.gene05666 | MS.gene08305 | 0.835398 | 1.72E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene08305 | 0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene08305 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene08305 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene08305 | 0.838594 | 2.62E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene08305 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene08305 | 0.858568 | 7.53E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene08305 | 0.834175 | 3.49E-56 | -1.69E-46 |
| MS.gene057285 | MS.gene08305 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene08305 | 0.84067 | 7.56E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene08305 | 0.85999 | 2.82E-63 | -1.69E-46 |
| MS.gene057537 | MS.gene08305 | 0.834538 | 2.83E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene08305 | 0.883069 | 6.13E-71 | -1.69E-46 |
| MS.gene057856 | MS.gene08305 | 0.806518 | 7.91E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene08305 | 0.824274 | 8.82E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene08305 | 0.841324 | 5.09E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene08305 | 0.83046 | 2.90E-55 | -1.69E-46 |
| MS.gene058075 | MS.gene08305 | 0.839675 | 1.38E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene08305 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene08305 | 0.841727 | 3.99E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene08305 | 0.809075 | 2.26E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene08305 | 0.808941 | 2.42E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene08305 | 0.855607 | 5.63E-62 | -1.69E-46 |
| MS.gene058459 | MS.gene08305 | 0.870682 | 1.21E-66 | -1.69E-46 |
| MS.gene058544 | MS.gene08305 | 0.820293 | 7.40E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene08305 | 0.81321 | 2.87E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene08305 | 0.817255 | 3.63E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene08305 | 0.819634 | 1.05E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene08305 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene08305 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene08305 | 0.851587 | 8.06E-61 | -1.69E-46 |
| MS.gene059305 | MS.gene08305 | 0.823146 | 1.62E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene08305 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene08305 | 0.809835 | 1.56E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene08305 | 0.865808 | 4.51E-65 | -1.69E-46 |
| MS.gene059368 | MS.gene08305 | 0.868049 | 8.71E-66 | -1.69E-46 |
| MS.gene059455 | MS.gene08305 | 0.810787 | 9.69E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene08305 | 0.838921 | 2.16E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene08305 | 0.818843 | 1.59E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene08305 | 0.818769 | 1.65E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene08305 | 0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene08305 | 0.834306 | 3.23E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene08305 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene08305 | 0.821992 | 3.01E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene08305 | 0.856851 | 2.43E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene08305 | 0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene08305 | 0.803923 | 2.76E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene08305 | 0.831029 | 2.10E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene08305 | 0.841729 | 3.98E-58 | -1.69E-46 |
| MS.gene05986 | MS.gene08305 | 0.806646 | 7.44E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene08305 | 0.803324 | 3.68E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene08305 | 0.821402 | 4.11E-53 | -1.69E-46 |
| MS.gene060356 | MS.gene08305 | 0.826518 | 2.60E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene08305 | 0.847531 | 1.09E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene08305 | 0.830764 | 2.44E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene08305 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene08305 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene08305 | 0.846214 | 2.50E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene08305 | 0.843323 | 1.50E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene08305 | 0.833152 | 6.29E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene08305 | 0.867553 | 1.26E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene08305 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene08305 | 0.883175 | 5.60E-71 | -1.69E-46 |
| MS.gene060982 | MS.gene08305 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene08305 | 0.857734 | 1.33E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene08305 | 0.833672 | 4.66E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene08305 | 0.826646 | 2.42E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene08305 | 0.863462 | 2.45E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08305.t1 | MTR_2g070420 | 75.549 | 364 | 86 | 1 | 4 | 364 | 4 | 367 | 0.0 | 561 |
| MS.gene08305.t1 | MTR_1g072440 | 60.000 | 85 | 32 | 1 | 10 | 94 | 4 | 86 | 7.49e-26 | 99.8 |
| MS.gene08305.t1 | MTR_3g076640 | 51.471 | 68 | 30 | 2 | 1 | 67 | 1 | 66 | 9.51e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08305.t1 | AT3G14420 | 74.521 | 365 | 90 | 1 | 4 | 365 | 3 | 367 | 0.0 | 552 |
| MS.gene08305.t1 | AT3G14420 | 74.521 | 365 | 90 | 1 | 4 | 365 | 3 | 367 | 0.0 | 552 |
| MS.gene08305.t1 | AT3G14420 | 74.247 | 365 | 91 | 1 | 4 | 365 | 3 | 367 | 0.0 | 549 |
| MS.gene08305.t1 | AT4G18360 | 71.866 | 359 | 98 | 1 | 4 | 359 | 3 | 361 | 0.0 | 547 |
| MS.gene08305.t1 | AT4G18360 | 71.866 | 359 | 98 | 1 | 4 | 359 | 3 | 361 | 0.0 | 547 |
| MS.gene08305.t1 | AT3G14415 | 73.425 | 365 | 94 | 1 | 4 | 365 | 3 | 367 | 0.0 | 545 |
| MS.gene08305.t1 | AT3G14415 | 73.425 | 365 | 94 | 1 | 4 | 365 | 3 | 367 | 0.0 | 545 |
| MS.gene08305.t1 | AT3G14415 | 71.968 | 371 | 95 | 1 | 4 | 365 | 3 | 373 | 0.0 | 541 |
| MS.gene08305.t1 | AT3G14420 | 74.425 | 348 | 86 | 1 | 21 | 365 | 1 | 348 | 0.0 | 523 |
| MS.gene08305.t1 | AT3G14420 | 73.832 | 321 | 81 | 1 | 48 | 365 | 40 | 360 | 2.01e-167 | 472 |
| MS.gene08305.t1 | AT4G18360 | 72.026 | 311 | 84 | 1 | 4 | 311 | 3 | 313 | 4.27e-167 | 469 |
| MS.gene08305.t1 | AT3G14420 | 73.832 | 321 | 81 | 1 | 48 | 365 | 46 | 366 | 1.08e-166 | 470 |
| MS.gene08305.t1 | AT3G14130 | 57.263 | 358 | 147 | 2 | 4 | 358 | 4 | 358 | 1.20e-144 | 414 |
| MS.gene08305.t1 | AT3G14130 | 57.263 | 358 | 147 | 2 | 4 | 358 | 4 | 358 | 1.20e-144 | 414 |
| MS.gene08305.t1 | AT3G14150 | 56.983 | 358 | 148 | 2 | 4 | 358 | 4 | 358 | 1.06e-143 | 412 |
| MS.gene08305.t1 | AT3G14150 | 56.983 | 358 | 148 | 2 | 4 | 358 | 4 | 358 | 1.06e-143 | 412 |
| MS.gene08305.t1 | AT3G14130 | 57.643 | 314 | 127 | 2 | 48 | 358 | 4 | 314 | 6.61e-125 | 362 |
| MS.gene08305.t1 | AT4G18360 | 70.000 | 240 | 69 | 1 | 4 | 240 | 3 | 242 | 3.92e-121 | 350 |
| MS.gene08305.t1 | AT3G14130 | 57.937 | 252 | 100 | 2 | 110 | 358 | 2 | 250 | 3.74e-100 | 297 |
| MS.gene08305.t1 | AT3G14150 | 56.044 | 273 | 114 | 2 | 89 | 358 | 3 | 272 | 4.52e-99 | 295 |
| MS.gene08305.t1 | AT3G14150 | 56.044 | 273 | 114 | 2 | 89 | 358 | 3 | 272 | 4.52e-99 | 295 |
| MS.gene08305.t1 | AT3G14150 | 56.044 | 273 | 114 | 2 | 89 | 358 | 3 | 272 | 4.52e-99 | 295 |
| MS.gene08305.t1 | AT3G14150 | 56.349 | 252 | 104 | 2 | 110 | 358 | 2 | 250 | 6.92e-97 | 288 |
| MS.gene08305.t1 | AT3G14150 | 56.349 | 252 | 104 | 2 | 110 | 358 | 2 | 250 | 6.92e-97 | 288 |
Find 86 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATAGGCATTGATATTT+TGG | 0.101254 | 4.3:-17102795 | None:intergenic |
| CTATGTCTCTGCAACTATTA+TGG | 0.217196 | 4.3:+17105290 | MS.gene08305:CDS |
| CTCTGCAACTATTATGGCTT+TGG | 0.314427 | 4.3:+17105296 | MS.gene08305:CDS |
| GTTGAGGAGGTTGCTTCAAC+TGG | 0.352845 | 4.3:+17103418 | MS.gene08305:CDS |
| CATAACCTAGGAGCAATTCT+AGG | 0.358275 | 4.3:-17106090 | None:intergenic |
| AGTCCCGCCTCCGTTATTAA+TGG | 0.374315 | 4.3:+17104813 | MS.gene08305:CDS |
| CTTGTAAACAGGATGTAAAA+TGG | 0.377123 | 4.3:+17104976 | MS.gene08305:intron |
| ATGTGGTTGCCGTTCACTTA+AGG | 0.387309 | 4.3:+17106029 | MS.gene08305:CDS |
| GATTTGACGACAACTGTATT+CGG | 0.401313 | 4.3:+17102770 | MS.gene08305:CDS |
| GGAATCATTGTTTCCAATCA+TGG | 0.403221 | 4.3:+17105252 | MS.gene08305:CDS |
| GCTATACAAGCTGGAGCTGC+TGG | 0.411827 | 4.3:+17105231 | MS.gene08305:CDS |
| AGCTGAAAATGCTGGTTTCA+AGG | 0.413087 | 4.3:+17104466 | MS.gene08305:CDS |
| GCTAGAGCAGCATCAGCAGC+TGG | 0.429151 | 4.3:+17102978 | MS.gene08305:CDS |
| CAGGGTGAGCCATCTGATGC+TGG | 0.429724 | 4.3:-17102832 | None:intergenic |
| CAAAATATCAATGCCTATCA+TGG | 0.437565 | 4.3:+17102796 | MS.gene08305:CDS |
| CCTATCATGGTTGCTCCTAC+AGG | 0.442082 | 4.3:+17102809 | MS.gene08305:CDS |
| GTAATATACTCACATATAGT+TGG | 0.443062 | 4.3:-17103459 | None:intergenic |
| AACTATTATGGCTTTGGAAG+AGG | 0.451225 | 4.3:+17105302 | MS.gene08305:CDS |
| TATATGACCGATCACTCAAC+TGG | 0.451960 | 4.3:+17104838 | MS.gene08305:CDS |
| TTGGCTGCTGACGGTGAAGC+TGG | 0.458711 | 4.3:+17105952 | MS.gene08305:CDS |
| GAATCCTTGAGAATGCATTT+CGG | 0.463806 | 4.3:-17102633 | None:intergenic |
| ATGAAGGCATGGGTCTTGAC+AGG | 0.467582 | 4.3:+17104677 | MS.gene08305:CDS |
| AGTACACCCTTGAGTATGAT+TGG | 0.468235 | 4.3:-17105020 | None:intergenic |
| GTCATATATGCCATTAATAA+CGG | 0.486179 | 4.3:-17104823 | None:intergenic |
| GCATTGGCTCTTGGAGCAGC+TGG | 0.487248 | 4.3:+17105610 | MS.gene08305:CDS |
| CCTGTAGGAGCAACCATGAT+AGG | 0.494745 | 4.3:-17102809 | None:intergenic |
| CATCCGGAGCAGAAGATGAA+TGG | 0.497546 | 4.3:+17102596 | MS.gene08305:CDS |
| AGTCCATTCATCTTCTGCTC+CGG | 0.506553 | 4.3:-17102599 | None:intergenic |
| TGAAGCAATTGCGAAGGAAA+AGG | 0.507192 | 4.3:+17102546 | MS.gene08305:CDS |
| AAGTTGGCGAGCACCATGAT+TGG | 0.508320 | 4.3:-17105265 | None:intergenic |
| TAGTGGTCATAAATCATCTT+CGG | 0.509596 | 4.3:-17102571 | None:intergenic |
| ATTTATGACCACTATGCATC+CGG | 0.514790 | 4.3:+17102580 | MS.gene08305:CDS |
| CTTGAGTATGATTGGCAATG+AGG | 0.521559 | 4.3:-17105012 | None:intergenic |
| CTTACGTCAATAAGAATTCG+CGG | 0.523739 | 4.3:-17102740 | None:intergenic |
| GCTAGGTTAGCTATACAAGC+TGG | 0.532846 | 4.3:+17105222 | MS.gene08305:intron |
| TAGTTCTTCAATCTCACGTA+TGG | 0.533005 | 4.3:-17104655 | None:intergenic |
| CTCATTGCCAATCATACTCA+AGG | 0.542575 | 4.3:+17105013 | MS.gene08305:CDS |
| ATTGAAGAACTATGAAGGCA+TGG | 0.545026 | 4.3:+17104666 | MS.gene08305:CDS |
| TCCTACAGGCCAGCATCAGA+TGG | 0.549915 | 4.3:+17102823 | MS.gene08305:CDS |
| CATCAGATGGCTCACCCTGA+AGG | 0.551255 | 4.3:+17102836 | MS.gene08305:CDS |
| GTGAGAAGAGCTGAAAATGC+TGG | 0.552801 | 4.3:+17104458 | MS.gene08305:CDS |
| TCACCTTCCAGTTGAGTGAT+CGG | 0.557754 | 4.3:-17104845 | None:intergenic |
| ATCAGCAGCTGGCACCATCA+TGG | 0.558759 | 4.3:+17102989 | MS.gene08305:CDS |
| AGCTCTTCTCACAAGTTGAG+TGG | 0.562053 | 4.3:-17104447 | None:intergenic |
| TTGCAGAGACATAGTCAAGT+TGG | 0.563204 | 4.3:-17105281 | None:intergenic |
| CAACACATAATATACCTTCA+GGG | 0.566358 | 4.3:-17102850 | None:intergenic |
| ATGGATGGTGGAGTCCGCCG+TGG | 0.569125 | 4.3:+17105571 | MS.gene08305:CDS |
| GTGAGATTGAAGAACTATGA+AGG | 0.571383 | 4.3:+17104661 | MS.gene08305:CDS |
| ATGCCATTAATAACGGAGGC+GGG | 0.574334 | 4.3:-17104816 | None:intergenic |
| GCCATCTGATGCTGGCCTGT+AGG | 0.574499 | 4.3:-17102824 | None:intergenic |
| AGTTGGAGGAAACGAATGCC+AGG | 0.577016 | 4.3:-17103442 | None:intergenic |
| GAGGTTGCTTCAACTGGACC+TGG | 0.580795 | 4.3:+17103424 | MS.gene08305:CDS |
| TAGGTTGTACAAGCTGCAGA+TGG | 0.586843 | 4.3:+17105532 | MS.gene08305:intron |
| TTGAAGAACTATGAAGGCAT+GGG | 0.587736 | 4.3:+17104667 | MS.gene08305:CDS |
| AAACTGCAGAGTCTGCAGTA+AGG | 0.591132 | 4.3:-17104496 | None:intergenic |
| TTCTTCAATCTCACGTATGG+CGG | 0.592020 | 4.3:-17104652 | None:intergenic |
| GCAGCCAATGCGTACACCAC+AGG | 0.593845 | 4.3:-17105937 | None:intergenic |
| CTGTGACAGACACTAGCCAC+AGG | 0.596253 | 4.3:+17103382 | MS.gene08305:intron |
| AGAACCGAAATGCATTCTCA+AGG | 0.600628 | 4.3:+17102629 | MS.gene08305:CDS |
| AATAAACTTACTATCTTCAG+CGG | 0.608699 | 4.3:-17105045 | None:intergenic |
| CGAGTATGAAGCAATTGCGA+AGG | 0.613426 | 4.3:+17102540 | MS.gene08305:CDS |
| ATATACTCACATATAGTTGG+AGG | 0.614105 | 4.3:-17103456 | None:intergenic |
| TATGCCATTAATAACGGAGG+CGG | 0.617104 | 4.3:-17104817 | None:intergenic |
| TGGATGGTGGAGTCCGCCGT+GGG | 0.619520 | 4.3:+17105572 | MS.gene08305:CDS |
| CGATCATGTTGTAACAGAGT+GGG | 0.619905 | 4.3:+17106062 | MS.gene08305:CDS |
| ACCGTCCTAGAATTGCTCCT+AGG | 0.620601 | 4.3:+17106085 | MS.gene08305:CDS |
| TGACCGATCACTCAACTGGA+AGG | 0.625791 | 4.3:+17104842 | MS.gene08305:CDS |
| GATGTTTAAAGACAGAAATG+TGG | 0.626344 | 4.3:+17104424 | MS.gene08305:intron |
| GAGTTATGTCCTTAAGTGAA+CGG | 0.633425 | 4.3:-17106038 | None:intergenic |
| TGTGACAGACACTAGCCACA+GGG | 0.633960 | 4.3:+17103383 | MS.gene08305:intron |
| TGGCGGAAACCATACCATGA+TGG | 0.636148 | 4.3:-17103003 | None:intergenic |
| ACCTAGGAGCAATTCTAGGA+CGG | 0.641673 | 4.3:-17106086 | None:intergenic |
| TGAAGGCATGGGTCTTGACA+GGG | 0.645088 | 4.3:+17104678 | MS.gene08305:CDS |
| CTTCTGCTCCGGATGCATAG+TGG | 0.647437 | 4.3:-17102588 | None:intergenic |
| AGACTGATATCTCATAACCT+AGG | 0.651330 | 4.3:-17106102 | None:intergenic |
| AAGACCTGTGGTGTACGCAT+TGG | 0.656184 | 4.3:+17105933 | MS.gene08305:CDS |
| GCGATCATGTTGTAACAGAG+TGG | 0.657974 | 4.3:+17106061 | MS.gene08305:CDS |
| TCATTGCCAATCATACTCAA+GGG | 0.658676 | 4.3:+17105014 | MS.gene08305:CDS |
| GTGTACGCATTGGCTGCTGA+CGG | 0.667917 | 4.3:+17105943 | MS.gene08305:CDS |
| GAAATAACCATGGCACTATG+TGG | 0.673264 | 4.3:+17106012 | MS.gene08305:CDS |
| TGATGAGCTTGAAATAACCA+TGG | 0.677579 | 4.3:+17106002 | MS.gene08305:CDS |
| ACGGCAACCACATAGTGCCA+TGG | 0.678893 | 4.3:-17106019 | None:intergenic |
| ATATATGCCATTAATAACGG+AGG | 0.679840 | 4.3:-17104820 | None:intergenic |
| ATATCAGATTGGAAGACCTG+TGG | 0.689539 | 4.3:+17105921 | MS.gene08305:intron |
| AACACTAAAAGTAGCCCCTG+TGG | 0.698154 | 4.3:-17103398 | None:intergenic |
| GTGACAGACACTAGCCACAG+GGG | 0.743558 | 4.3:+17103384 | MS.gene08305:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACAATTATTATTAGTA+AGG | - | chr4.3:17105450-17105469 | None:intergenic | 10.0% |
| !! | AAAAATTAAAAAATTGCTAT+CGG | + | chr4.3:17105770-17105789 | MS.gene08305:intron | 10.0% |
| !! | TTATTAACAAACTTTAAATT+TGG | - | chr4.3:17105748-17105767 | None:intergenic | 10.0% |
| !! | AAAAAATGAAATCGTTAAAA+AGG | + | chr4.3:17103244-17103263 | MS.gene08305:intron | 15.0% |
| !! | AAAAAGGATTTAGATTTAAA+TGG | + | chr4.3:17103260-17103279 | MS.gene08305:intron | 15.0% |
| !! | AAAATTCAAACAAAAATCAA+AGG | - | chr4.3:17105147-17105166 | None:intergenic | 15.0% |
| !! | AAGTAAATAAGTACAATAAA+AGG | - | chr4.3:17103139-17103158 | None:intergenic | 15.0% |
| !! | AATATTAAATAGCAACATTA+AGG | - | chr4.3:17104756-17104775 | None:intergenic | 15.0% |
| !! | TAAATAATCTAATTGTAATG+TGG | + | chr4.3:17105680-17105699 | MS.gene08305:intron | 15.0% |
| !! | TTCATAAAGTTAAATTAACA+AGG | - | chr4.3:17104066-17104085 | None:intergenic | 15.0% |
| !!! | AATGTTGCTATTTAATATTT+GGG | + | chr4.3:17104757-17104776 | MS.gene08305:intron | 15.0% |
| !!! | TAATGTTGCTATTTAATATT+TGG | + | chr4.3:17104756-17104775 | MS.gene08305:intron | 15.0% |
| !!! | TAGTTCATATCATTAATTTT+AGG | - | chr4.3:17104174-17104193 | None:intergenic | 15.0% |
| !! | AAAACTTCATCAAAATATTC+AGG | - | chr4.3:17104616-17104635 | None:intergenic | 20.0% |
| !! | AAAATAACTTAAAGAATTGC+AGG | + | chr4.3:17104139-17104158 | MS.gene08305:intron | 20.0% |
| !! | ATGAAAAATAAATCTTGGAA+TGG | - | chr4.3:17105417-17105436 | None:intergenic | 20.0% |
| !! | CTATTTAATATTTGGGAAAT+TGG | + | chr4.3:17104764-17104783 | MS.gene08305:intron | 20.0% |
| !! | GAAAAGTAAATCTATAATAC+AGG | - | chr4.3:17105892-17105911 | None:intergenic | 20.0% |
| !! | GGTTATGGTTATAAAAAATA+TGG | - | chr4.3:17103928-17103947 | None:intergenic | 20.0% |
| !! | TATAATGAGTTTGCAAATTA+AGG | + | chr4.3:17103663-17103682 | MS.gene08305:intron | 20.0% |
| !! | TATAGCATTATTACTATAAG+TGG | - | chr4.3:17103647-17103666 | None:intergenic | 20.0% |
| !! | TATCTTACTCTAATATAGAA+TGG | + | chr4.3:17103092-17103111 | MS.gene08305:intron | 20.0% |
| !! | TATTGTACTTATTTACTTGT+TGG | + | chr4.3:17103141-17103160 | MS.gene08305:intron | 20.0% |
| !! | TTATTATTAGTAAGGAAACA+AGG | - | chr4.3:17105442-17105461 | None:intergenic | 20.0% |
| !!! | ATGTTTTGCTATTAAAATGA+TGG | - | chr4.3:17104298-17104317 | None:intergenic | 20.0% |
| !!! | TGTAATATTTTTTACAACCT+GGG | + | chr4.3:17103341-17103360 | MS.gene08305:intron | 20.0% |
| !!! | TTCATTTGTGTTTTGTTAAA+GGG | + | chr4.3:17105703-17105722 | MS.gene08305:intron | 20.0% |
| !!! | TTGTAATATTTTTTACAACC+TGG | + | chr4.3:17103340-17103359 | MS.gene08305:intron | 20.0% |
| ! | AAACTTAAATGTCAAAAGAC+TGG | - | chr4.3:17102879-17102898 | None:intergenic | 25.0% |
| ! | AACATAACTTAGTTTAACTC+AGG | + | chr4.3:17103578-17103597 | MS.gene08305:intron | 25.0% |
| ! | AAGCAATATACTTCTTGATT+TGG | - | chr4.3:17103055-17103074 | None:intergenic | 25.0% |
| ! | AATAAACTTACTATCTTCAG+CGG | - | chr4.3:17105048-17105067 | None:intergenic | 25.0% |
| ! | ACATACAAGGGTAAATTAAA+TGG | - | chr4.3:17102700-17102719 | None:intergenic | 25.0% |
| ! | ACTAGAGTAGAGAATAAATA+TGG | - | chr4.3:17103026-17103045 | None:intergenic | 25.0% |
| ! | AGGCAATGAAAAATAAATCT+TGG | - | chr4.3:17105422-17105441 | None:intergenic | 25.0% |
| ! | ATAAAATAAGATAAAGACCG+TGG | + | chr4.3:17104261-17104280 | MS.gene08305:intron | 25.0% |
| ! | CAAACAAAAATCAAAGGATA+AGG | - | chr4.3:17105141-17105160 | None:intergenic | 25.0% |
| ! | CAATAGCATAAAAAATCATC+TGG | - | chr4.3:17104730-17104749 | None:intergenic | 25.0% |
| ! | CCTATTCAAGGTAAAAAAAT+TGG | - | chr4.3:17105516-17105535 | None:intergenic | 25.0% |
| ! | GTAATATACTCACATATAGT+TGG | - | chr4.3:17103462-17103481 | None:intergenic | 25.0% |
| ! | GTCATATATGCCATTAATAA+CGG | - | chr4.3:17104826-17104845 | None:intergenic | 25.0% |
| ! | TAAAATAAGATAAAGACCGT+GGG | + | chr4.3:17104262-17104281 | MS.gene08305:intron | 25.0% |
| ! | TATTCTATTAGAACAACAGA+TGG | - | chr4.3:17105483-17105502 | None:intergenic | 25.0% |
| ! | TCTATAATGAAAGATAGAAC+TGG | + | chr4.3:17104036-17104055 | MS.gene08305:intron | 25.0% |
| ! | TGAGAAATTACAAAACTTGA+AGG | + | chr4.3:17105816-17105835 | MS.gene08305:intron | 25.0% |
| ! | TTTAATACAATCGTGCAATT+TGG | + | chr4.3:17103783-17103802 | MS.gene08305:intron | 25.0% |
| !! | AAAAACAGGTTGAATATCAT+TGG | + | chr4.3:17104542-17104561 | MS.gene08305:intron | 25.0% |
| !! | AGATTTAAATGGTTTGTCAA+TGG | + | chr4.3:17103271-17103290 | MS.gene08305:intron | 25.0% |
| !! | CTATCGGAATAACATTTTAA+AGG | + | chr4.3:17105786-17105805 | MS.gene08305:intron | 25.0% |
| !! | TAGTTACCTGTGATTTTTAA+GGG | + | chr4.3:17103729-17103748 | MS.gene08305:intron | 25.0% |
| !! | TTAGTTACCTGTGATTTTTA+AGG | + | chr4.3:17103728-17103747 | MS.gene08305:intron | 25.0% |
| !!! | AAAATTCCTGTTTTTATGGA+TGG | + | chr4.3:17105556-17105575 | MS.gene08305:CDS | 25.0% |
| !!! | ATGTTTTTGTTTCTCCAAAT+TGG | - | chr4.3:17104099-17104118 | None:intergenic | 25.0% |
| !!! | CCAATTTTTTTACCTTGAAT+AGG | + | chr4.3:17105513-17105532 | MS.gene08305:intron | 25.0% |
| !!! | GTTCATTTGTGTTTTGTTAA+AGG | + | chr4.3:17105702-17105721 | MS.gene08305:intron | 25.0% |
| !!! | TGGAAAAATTCCTGTTTTTA+TGG | + | chr4.3:17105552-17105571 | MS.gene08305:CDS | 25.0% |
| AAAACATCCGAATTCCAAAT+TGG | + | chr4.3:17104001-17104020 | MS.gene08305:intron | 30.0% | |
| AGAGTAGAGAATAAATATGG+CGG | - | chr4.3:17103023-17103042 | None:intergenic | 30.0% | |
| ATATACTCACATATAGTTGG+AGG | - | chr4.3:17103459-17103478 | None:intergenic | 30.0% | |
| ATATATGCCATTAATAACGG+AGG | - | chr4.3:17104823-17104842 | None:intergenic | 30.0% | |
| ATGAGTTTGCAAATTAAGGT+TGG | + | chr4.3:17103667-17103686 | MS.gene08305:intron | 30.0% | |
| CAAAATATCAATGCCTATCA+TGG | + | chr4.3:17102796-17102815 | MS.gene08305:CDS | 30.0% | |
| CAACACATAATATACCTTCA+GGG | - | chr4.3:17102853-17102872 | None:intergenic | 30.0% | |
| CGAATGTTAAATGACCTATT+TGG | + | chr4.3:17104204-17104223 | MS.gene08305:intron | 30.0% | |
| CTACATTCTATCTTTGCATT+TGG | - | chr4.3:17103861-17103880 | None:intergenic | 30.0% | |
| CTTGTAAACAGGATGTAAAA+TGG | + | chr4.3:17104976-17104995 | MS.gene08305:intron | 30.0% | |
| GATGTTTAAAGACAGAAATG+TGG | + | chr4.3:17104424-17104443 | MS.gene08305:intron | 30.0% | |
| TAGTGGTCATAAATCATCTT+CGG | - | chr4.3:17102574-17102593 | None:intergenic | 30.0% | |
| TCATCTCGAATATATCAGAT+TGG | + | chr4.3:17105910-17105929 | MS.gene08305:intron | 30.0% | |
| TGAAAGTTGAAAGACCAATT+TGG | + | chr4.3:17104082-17104101 | MS.gene08305:intron | 30.0% | |
| TTGTTGGCAAATGTAATGTA+AGG | + | chr4.3:17103157-17103176 | MS.gene08305:intron | 30.0% | |
| ! | CATTTTACATCCTGTTTACA+AGG | - | chr4.3:17104978-17104997 | None:intergenic | 30.0% |
| ! | TCTTCTTCTTTTCTCCAAAT+AGG | - | chr4.3:17104221-17104240 | None:intergenic | 30.0% |
| ! | TGTTTTCAGCAAACATACAA+GGG | - | chr4.3:17102712-17102731 | None:intergenic | 30.0% |
| ! | TTGTTTGCCAATTTGGAATT+CGG | - | chr4.3:17104011-17104030 | None:intergenic | 30.0% |
| !! | AATACAGGAAAAATTTGCTG+CGG | - | chr4.3:17105877-17105896 | None:intergenic | 30.0% |
| !! | GATGATTTTGTTTGCCAATT+TGG | - | chr4.3:17104018-17104037 | None:intergenic | 30.0% |
| !!! | CATGATAGGCATTGATATTT+TGG | - | chr4.3:17102798-17102817 | None:intergenic | 30.0% |
| !!! | GACAGATGTTTTTAAAGCAT+TGG | + | chr4.3:17105594-17105613 | MS.gene08305:CDS | 30.0% |
| AAAGGACCCTTAAAAATCAC+AGG | - | chr4.3:17103738-17103757 | None:intergenic | 35.0% | |
| AAATATGGCTTAAGTCTCAG+CGG | - | chr4.3:17103913-17103932 | None:intergenic | 35.0% | |
| AAATGTTCTTTCGTTCAACG+AGG | - | chr4.3:17103546-17103565 | None:intergenic | 35.0% | |
| AACGCACTAAGTTAGATTCA+TGG | - | chr4.3:17103307-17103326 | None:intergenic | 35.0% | |
| AATCGTGCAATTTGGACTAT+TGG | + | chr4.3:17103791-17103810 | MS.gene08305:intron | 35.0% | |
| ACCTAGCTACATAATTAGCA+TGG | - | chr4.3:17105209-17105228 | None:intergenic | 35.0% | |
| ACTAGAGTCTTTATTCTGCA+AGG | - | chr4.3:17104796-17104815 | None:intergenic | 35.0% | |
| AGGTTAGAATTCAAGTGAAG+TGG | + | chr4.3:17103177-17103196 | MS.gene08305:intron | 35.0% | |
| AGTCAAAACTACTACTTGTG+TGG | - | chr4.3:17104338-17104357 | None:intergenic | 35.0% | |
| ATTAGCATGGAATCAGATTG+TGG | - | chr4.3:17105196-17105215 | None:intergenic | 35.0% | |
| ATTGAAGAACTATGAAGGCA+TGG | + | chr4.3:17104666-17104685 | MS.gene08305:CDS | 35.0% | |
| ATTTATGACCACTATGCATC+CGG | + | chr4.3:17102580-17102599 | MS.gene08305:CDS | 35.0% | |
| CAATCATGCAATTCTTATGC+AGG | + | chr4.3:17102942-17102961 | MS.gene08305:intron | 35.0% | |
| CTATGTCTCTGCAACTATTA+TGG | + | chr4.3:17105290-17105309 | MS.gene08305:CDS | 35.0% | |
| CTGCATAAGAATTGCATGAT+TGG | - | chr4.3:17102944-17102963 | None:intergenic | 35.0% | |
| CTTACGTCAATAAGAATTCG+CGG | - | chr4.3:17102743-17102762 | None:intergenic | 35.0% | |
| CTTATGAAAATGAATCTCCC+AGG | - | chr4.3:17103361-17103380 | None:intergenic | 35.0% | |
| GAATCCTTGAGAATGCATTT+CGG | - | chr4.3:17102636-17102655 | None:intergenic | 35.0% | |
| GAGTTATGTCCTTAAGTGAA+CGG | - | chr4.3:17106041-17106060 | None:intergenic | 35.0% | |
| GATTTGACGACAACTGTATT+CGG | + | chr4.3:17102770-17102789 | MS.gene08305:CDS | 35.0% | |
| GCAACACATAATATACCTTC+AGG | - | chr4.3:17102854-17102873 | None:intergenic | 35.0% | |
| GGAATCATTGTTTCCAATCA+TGG | + | chr4.3:17105252-17105271 | MS.gene08305:CDS | 35.0% | |
| GGTTAGAATTCAAGTGAAGT+GGG | + | chr4.3:17103178-17103197 | MS.gene08305:intron | 35.0% | |
| GTGAGATTGAAGAACTATGA+AGG | + | chr4.3:17104661-17104680 | MS.gene08305:CDS | 35.0% | |
| TACATTCAATGTCAGGTACT+AGG | - | chr4.3:17104930-17104949 | None:intergenic | 35.0% | |
| TAGTTCTTCAATCTCACGTA+TGG | - | chr4.3:17104658-17104677 | None:intergenic | 35.0% | |
| TCATAGCAAACCTTGTAAAC+AGG | + | chr4.3:17104965-17104984 | MS.gene08305:intron | 35.0% | |
| TCATTGCCAATCATACTCAA+GGG | + | chr4.3:17105014-17105033 | MS.gene08305:CDS | 35.0% | |
| TCCATGCTAATTATGTAGCT+AGG | + | chr4.3:17105205-17105224 | MS.gene08305:intron | 35.0% | |
| TGAAAATGGAGTAGTGTATG+AGG | + | chr4.3:17103201-17103220 | MS.gene08305:intron | 35.0% | |
| TGACTTCTACATTCAATGTC+AGG | - | chr4.3:17104937-17104956 | None:intergenic | 35.0% | |
| TGATGAGCTTGAAATAACCA+TGG | + | chr4.3:17106002-17106021 | MS.gene08305:CDS | 35.0% | |
| ! | CTGTTTTCAGCAAACATACA+AGG | - | chr4.3:17102713-17102732 | None:intergenic | 35.0% |
| ! | CTTTAAAAACATCTGTCCCA+CGG | - | chr4.3:17105591-17105610 | None:intergenic | 35.0% |
| ! | TGTTTGCTGAAAACAGATTC+AGG | + | chr4.3:17102717-17102736 | MS.gene08305:intron | 35.0% |
| ! | TTGAAGAACTATGAAGGCAT+GGG | + | chr4.3:17104667-17104686 | MS.gene08305:CDS | 35.0% |
| !! | AACTATTATGGCTTTGGAAG+AGG | + | chr4.3:17105302-17105321 | MS.gene08305:CDS | 35.0% |
| !!! | ATTCCTGTTTTTATGGATGG+TGG | + | chr4.3:17105559-17105578 | MS.gene08305:CDS | 35.0% |
| !!! | GTCAAGAAGGATTTTGGTTA+TGG | - | chr4.3:17103943-17103962 | None:intergenic | 35.0% |
| !!! | GTTTTTAAAGCATTGGCTCT+TGG | + | chr4.3:17105601-17105620 | MS.gene08305:CDS | 35.0% |
| AAGTGTGATTCATTGACAGC+AGG | - | chr4.3:17103764-17103783 | None:intergenic | 40.0% | |
| AATAAGATAAAGACCGTGGG+AGG | + | chr4.3:17104265-17104284 | MS.gene08305:intron | 40.0% | |
| AATATGGCTTAAGTCTCAGC+GGG | - | chr4.3:17103912-17103931 | None:intergenic | 40.0% | |
| AATTCACCAAAGTCGGAATG+TGG | - | chr4.3:17103833-17103852 | None:intergenic | 40.0% | |
| ACTCCACCATCCATAAAAAC+AGG | - | chr4.3:17105565-17105584 | None:intergenic | 40.0% | |
| AGAACCGAAATGCATTCTCA+AGG | + | chr4.3:17102629-17102648 | MS.gene08305:CDS | 40.0% | |
| AGTACACCCTTGAGTATGAT+TGG | - | chr4.3:17105023-17105042 | None:intergenic | 40.0% | |
| AGTGTGATTCATTGACAGCA+GGG | - | chr4.3:17103763-17103782 | None:intergenic | 40.0% | |
| ATAAGATAAAGACCGTGGGA+GGG | + | chr4.3:17104266-17104285 | MS.gene08305:intron | 40.0% | |
| ATATCAGATTGGAAGACCTG+TGG | + | chr4.3:17105921-17105940 | MS.gene08305:intron | 40.0% | |
| ATTCACCAAAGTCGGAATGT+GGG | - | chr4.3:17103832-17103851 | None:intergenic | 40.0% | |
| CAGCTTGTACAACCTATTCA+AGG | - | chr4.3:17105528-17105547 | None:intergenic | 40.0% | |
| CATAACCTAGGAGCAATTCT+AGG | - | chr4.3:17106093-17106112 | None:intergenic | 40.0% | |
| CGATCATGTTGTAACAGAGT+GGG | + | chr4.3:17106062-17106081 | MS.gene08305:CDS | 40.0% | |
| CTCATTGCCAATCATACTCA+AGG | + | chr4.3:17105013-17105032 | MS.gene08305:CDS | 40.0% | |
| CTCTGCAACTATTATGGCTT+TGG | + | chr4.3:17105296-17105315 | MS.gene08305:CDS | 40.0% | |
| CTTGAGTATGATTGGCAATG+AGG | - | chr4.3:17105015-17105034 | None:intergenic | 40.0% | |
| GAAATAACCATGGCACTATG+TGG | + | chr4.3:17106012-17106031 | MS.gene08305:CDS | 40.0% | |
| GGAACTCAATTCACCAAAGT+CGG | - | chr4.3:17103840-17103859 | None:intergenic | 40.0% | |
| GGGAGGCTAACATAAAAAAC+AGG | + | chr4.3:17104528-17104547 | MS.gene08305:CDS | 40.0% | |
| TATATGACCGATCACTCAAC+TGG | + | chr4.3:17104838-17104857 | MS.gene08305:CDS | 40.0% | |
| TCAAGTGAAGTGGGTGAAAA+TGG | + | chr4.3:17103187-17103206 | MS.gene08305:intron | 40.0% | |
| TGAAGCAATTGCGAAGGAAA+AGG | + | chr4.3:17102546-17102565 | MS.gene08305:CDS | 40.0% | |
| TTCATTGACAGCAGGGAAAA+AGG | - | chr4.3:17103756-17103775 | None:intergenic | 40.0% | |
| TTCTTCAATCTCACGTATGG+CGG | - | chr4.3:17104655-17104674 | None:intergenic | 40.0% | |
| TTGCAGAGACATAGTCAAGT+TGG | - | chr4.3:17105284-17105303 | None:intergenic | 40.0% | |
| ! | AGGAAGCATGTTAGTAAGCA+TGG | - | chr4.3:17103119-17103138 | None:intergenic | 40.0% |
| ! | CTTTGGAAGAGGTCTGATTT+AGG | + | chr4.3:17105313-17105332 | MS.gene08305:intron | 40.0% |
| ! | GTATGGCGGAAATGTAAATC+TGG | - | chr4.3:17104641-17104660 | None:intergenic | 40.0% |
| ! | TATGCCATTAATAACGGAGG+CGG | - | chr4.3:17104820-17104839 | None:intergenic | 40.0% |
| !! | AGCTGAAAATGCTGGTTTCA+AGG | + | chr4.3:17104466-17104485 | MS.gene08305:CDS | 40.0% |
| !! | GGTGTTGTCAAGAAGGATTT+TGG | - | chr4.3:17103949-17103968 | None:intergenic | 40.0% |
| AAACTGCAGAGTCTGCAGTA+AGG | - | chr4.3:17104499-17104518 | None:intergenic | 45.0% | |
| AACACTAAAAGTAGCCCCTG+TGG | - | chr4.3:17103401-17103420 | None:intergenic | 45.0% | |
| AACCATGAAGATAGCACCAG+AGG | - | chr4.3:17105339-17105358 | None:intergenic | 45.0% | |
| AGACATACGTCTCAGCTCTA+TGG | - | chr4.3:17103970-17103989 | None:intergenic | 45.0% | |
| AGTCCATTCATCTTCTGCTC+CGG | - | chr4.3:17102602-17102621 | None:intergenic | 45.0% | |
| ATGTGGTTGCCGTTCACTTA+AGG | + | chr4.3:17106029-17106048 | MS.gene08305:CDS | 45.0% | |
| CGAGTATGAAGCAATTGCGA+AGG | + | chr4.3:17102540-17102559 | MS.gene08305:CDS | 45.0% | |
| GCGATCATGTTGTAACAGAG+TGG | + | chr4.3:17106061-17106080 | MS.gene08305:CDS | 45.0% | |
| GTGAGAAGAGCTGAAAATGC+TGG | + | chr4.3:17104458-17104477 | MS.gene08305:CDS | 45.0% | |
| TAAAAACATCTGTCCCACGG+CGG | - | chr4.3:17105588-17105607 | None:intergenic | 45.0% | |
| TAGGTTGTACAAGCTGCAGA+TGG | + | chr4.3:17105532-17105551 | MS.gene08305:intron | 45.0% | |
| TCACCTTCCAGTTGAGTGAT+CGG | - | chr4.3:17104848-17104867 | None:intergenic | 45.0% | |
| TGTTCTTTCGTTCAACGAGG+AGG | - | chr4.3:17103543-17103562 | None:intergenic | 45.0% | |
| ! | ACCTAGGAGCAATTCTAGGA+CGG | - | chr4.3:17106089-17106108 | None:intergenic | 45.0% |
| ! | ACTGCAGACTCTGCAGTTTT+TGG | + | chr4.3:17104500-17104519 | MS.gene08305:CDS | 45.0% |
| ! | AGCTCTTCTCACAAGTTGAG+TGG | - | chr4.3:17104450-17104469 | None:intergenic | 45.0% |
| ! | ATGCCATTAATAACGGAGGC+GGG | - | chr4.3:17104819-17104838 | None:intergenic | 45.0% |
| ! | GCTAGGTTAGCTATACAAGC+TGG | + | chr4.3:17105222-17105241 | MS.gene08305:intron | 45.0% |
| !! | ACAGGAAAAATTTGCTGCGG+AGG | - | chr4.3:17105874-17105893 | None:intergenic | 45.0% |
| !! | GCTCTATGGTGTTGTCAAGA+AGG | - | chr4.3:17103956-17103975 | None:intergenic | 45.0% |
| !!! | AGGGGCTACTTTTAGTGTTG+AGG | + | chr4.3:17103402-17103421 | MS.gene08305:CDS | 45.0% |
| !!! | GGCTACTTTTAGTGTTGAGG+AGG | + | chr4.3:17103405-17103424 | MS.gene08305:CDS | 45.0% |
| AAGACCTGTGGTGTACGCAT+TGG | + | chr4.3:17105933-17105952 | MS.gene08305:CDS | 50.0% | |
| AAGTTGGCGAGCACCATGAT+TGG | - | chr4.3:17105268-17105287 | None:intergenic | 50.0% | |
| ACCGTCCTAGAATTGCTCCT+AGG | + | chr4.3:17106085-17106104 | MS.gene08305:CDS | 50.0% | |
| AGAGGTCTGATTTAGGCCTC+TGG | + | chr4.3:17105320-17105339 | MS.gene08305:intron | 50.0% | |
| AGTCCCGCCTCCGTTATTAA+TGG | + | chr4.3:17104813-17104832 | MS.gene08305:CDS | 50.0% | |
| AGTTGGAGGAAACGAATGCC+AGG | - | chr4.3:17103445-17103464 | None:intergenic | 50.0% | |
| CATCCGGAGCAGAAGATGAA+TGG | + | chr4.3:17102596-17102615 | MS.gene08305:CDS | 50.0% | |
| CCTATCATGGTTGCTCCTAC+AGG | + | chr4.3:17102809-17102828 | MS.gene08305:CDS | 50.0% | |
| CCTGTAGGAGCAACCATGAT+AGG | - | chr4.3:17102812-17102831 | None:intergenic | 50.0% | |
| CTACTTGTGTGGCTGTAGCA+AGG | - | chr4.3:17104327-17104346 | None:intergenic | 50.0% | |
| GTTGAGGAGGTTGCTTCAAC+TGG | + | chr4.3:17103418-17103437 | MS.gene08305:CDS | 50.0% | |
| TGACCGATCACTCAACTGGA+AGG | + | chr4.3:17104842-17104861 | MS.gene08305:CDS | 50.0% | |
| TGATGGCAAAAACCCTCCCA+CGG | - | chr4.3:17104281-17104300 | None:intergenic | 50.0% | |
| TGGCGGAAACCATACCATGA+TGG | - | chr4.3:17103006-17103025 | None:intergenic | 50.0% | |
| TGTGACAGACACTAGCCACA+GGG | + | chr4.3:17103383-17103402 | MS.gene08305:intron | 50.0% | |
| ! | ATGAAGGCATGGGTCTTGAC+AGG | + | chr4.3:17104677-17104696 | MS.gene08305:CDS | 50.0% |
| ! | TGAAGGCATGGGTCTTGACA+GGG | + | chr4.3:17104678-17104697 | MS.gene08305:CDS | 50.0% |
| !!! | ACTCTGCAGTTTTTGGTCGC+AGG | + | chr4.3:17104507-17104526 | MS.gene08305:CDS | 50.0% |
| !!! | CTCTGCAGTTTTTGGTCGCA+GGG | + | chr4.3:17104508-17104527 | MS.gene08305:CDS | 50.0% |
| ACGGCAACCACATAGTGCCA+TGG | - | chr4.3:17106022-17106041 | None:intergenic | 55.0% | |
| ATCAGCAGCTGGCACCATCA+TGG | + | chr4.3:17102989-17103008 | MS.gene08305:CDS | 55.0% | |
| CAGCTGGCACCATCATGGTA+TGG | + | chr4.3:17102994-17103013 | MS.gene08305:intron | 55.0% | |
| CATCAGATGGCTCACCCTGA+AGG | + | chr4.3:17102836-17102855 | MS.gene08305:CDS | 55.0% | |
| CTGTGACAGACACTAGCCAC+AGG | + | chr4.3:17103382-17103401 | MS.gene08305:intron | 55.0% | |
| CTTCTGCTCCGGATGCATAG+TGG | - | chr4.3:17102591-17102610 | None:intergenic | 55.0% | |
| GACGACCCACATTCCGACTT+TGG | + | chr4.3:17103824-17103843 | MS.gene08305:intron | 55.0% | |
| GAGCTGAGACGTATGTCTGC+TGG | + | chr4.3:17103972-17103991 | MS.gene08305:intron | 55.0% | |
| GAGGTTGCTTCAACTGGACC+TGG | + | chr4.3:17103424-17103443 | MS.gene08305:CDS | 55.0% | |
| GCAAGCAGTGAATTTCCCCG+TGG | - | chr4.3:17103706-17103725 | None:intergenic | 55.0% | |
| GCTATACAAGCTGGAGCTGC+TGG | + | chr4.3:17105231-17105250 | MS.gene08305:CDS | 55.0% | |
| GTGACAGACACTAGCCACAG+GGG | + | chr4.3:17103384-17103403 | MS.gene08305:intron | 55.0% | |
| TCCTACAGGCCAGCATCAGA+TGG | + | chr4.3:17102823-17102842 | MS.gene08305:CDS | 55.0% | |
| !! | GGCCTCTGGTGCTATCTTCA+TGG | + | chr4.3:17105334-17105353 | MS.gene08305:intron | 55.0% |
| !! | GTGTACGCATTGGCTGCTGA+CGG | + | chr4.3:17105943-17105962 | MS.gene08305:CDS | 55.0% |
| !!! | TGCAGTTTTTGGTCGCAGGG+AGG | + | chr4.3:17104511-17104530 | MS.gene08305:CDS | 55.0% |
| ATTTCCCCGTGGCAGCATGC+AGG | - | chr4.3:17103695-17103714 | None:intergenic | 60.0% | |
| CAGGGTGAGCCATCTGATGC+TGG | - | chr4.3:17102835-17102854 | None:intergenic | 60.0% | |
| GCAGCCAATGCGTACACCAC+AGG | - | chr4.3:17105940-17105959 | None:intergenic | 60.0% | |
| GCTAGAGCAGCATCAGCAGC+TGG | + | chr4.3:17102978-17102997 | MS.gene08305:CDS | 60.0% | |
| TTGGCTCCTGCATGCTGCCA+CGG | + | chr4.3:17103686-17103705 | MS.gene08305:intron | 60.0% | |
| TTGGCTGCTGACGGTGAAGC+TGG | + | chr4.3:17105952-17105971 | MS.gene08305:CDS | 60.0% | |
| ! | GCCATCTGATGCTGGCCTGT+AGG | - | chr4.3:17102827-17102846 | None:intergenic | 60.0% |
| !! | GCATTGGCTCTTGGAGCAGC+TGG | + | chr4.3:17105610-17105629 | MS.gene08305:CDS | 60.0% |
| TGGCTCCTGCATGCTGCCAC+GGG | + | chr4.3:17103687-17103706 | MS.gene08305:intron | 65.0% | |
| !! | ATGGATGGTGGAGTCCGCCG+TGG | + | chr4.3:17105571-17105590 | MS.gene08305:CDS | 65.0% |
| !! | TGGATGGTGGAGTCCGCCGT+GGG | + | chr4.3:17105572-17105591 | MS.gene08305:CDS | 65.0% |
| GGCTCCTGCATGCTGCCACG+GGG | + | chr4.3:17103688-17103707 | MS.gene08305:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 17102517 | 17106113 | 17102517 | ID=MS.gene08305 |
| chr4.3 | mRNA | 17102517 | 17106113 | 17102517 | ID=MS.gene08305.t1;Parent=MS.gene08305 |
| chr4.3 | exon | 17102517 | 17102656 | 17102517 | ID=MS.gene08305.t1.exon1;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17102517 | 17102656 | 17102517 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17102733 | 17102857 | 17102733 | ID=MS.gene08305.t1.exon2;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17102733 | 17102857 | 17102733 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17102964 | 17103010 | 17102964 | ID=MS.gene08305.t1.exon3;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17102964 | 17103010 | 17102964 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17103391 | 17103468 | 17103391 | ID=MS.gene08305.t1.exon4;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17103391 | 17103468 | 17103391 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17104425 | 17104549 | 17104425 | ID=MS.gene08305.t1.exon5;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17104425 | 17104549 | 17104425 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17104642 | 17104699 | 17104642 | ID=MS.gene08305.t1.exon6;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17104642 | 17104699 | 17104642 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17104801 | 17104863 | 17104801 | ID=MS.gene08305.t1.exon7;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17104801 | 17104863 | 17104801 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17104987 | 17105056 | 17104987 | ID=MS.gene08305.t1.exon8;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17104987 | 17105056 | 17104987 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17105223 | 17105323 | 17105223 | ID=MS.gene08305.t1.exon9;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17105223 | 17105323 | 17105223 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17105535 | 17105639 | 17105535 | ID=MS.gene08305.t1.exon10;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17105535 | 17105639 | 17105535 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| chr4.3 | exon | 17105928 | 17106113 | 17105928 | ID=MS.gene08305.t1.exon11;Parent=MS.gene08305.t1 |
| chr4.3 | CDS | 17105928 | 17106113 | 17105928 | ID=cds.MS.gene08305.t1;Parent=MS.gene08305.t1 |
| Gene Sequence |
| Protein sequence |
