Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32656.t1 | XP_003603362.1 | 98.5 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 5.90E-50 | 206.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32656.t1 | P14009 | 65.1 | 86 | 28 | 2 | 45 | 129 | 52 | 136 | 1.9e-25 | 116.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32656.t1 | B7FMX8 | 98.5 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.3e-50 | 206.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene32656 | 0.883603 | 3.90E-71 | -1.69E-46 |
| MS.gene049173 | MS.gene32656 | 0.85638 | 3.35E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene32656 | 0.840873 | 6.69E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene32656 | 0.876634 | 1.19E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene32656 | 0.88767 | 1.16E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene32656 | 0.919949 | 2.37E-87 | -1.69E-46 |
| MS.gene049320 | MS.gene32656 | 0.922284 | 1.20E-88 | -1.69E-46 |
| MS.gene049396 | MS.gene32656 | 0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene04939 | MS.gene32656 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene049600 | MS.gene32656 | 0.828922 | 6.87E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene32656 | 0.856555 | 2.97E-62 | -1.69E-46 |
| MS.gene049627 | MS.gene32656 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene32656 | 0.860479 | 2.01E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene32656 | 0.821683 | 3.54E-53 | -1.69E-46 |
| MS.gene049865 | MS.gene32656 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene32656 | 0.891064 | 5.58E-74 | -1.69E-46 |
| MS.gene050163 | MS.gene32656 | 0.863976 | 1.69E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene32656 | 0.862687 | 4.25E-64 | -1.69E-46 |
| MS.gene050170 | MS.gene32656 | 0.860481 | 2.00E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene32656 | 0.855705 | 5.27E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene32656 | 0.880344 | 5.93E-70 | -1.69E-46 |
| MS.gene050333 | MS.gene32656 | 0.880288 | 6.21E-70 | -1.69E-46 |
| MS.gene050381 | MS.gene32656 | -0.814847 | 1.25E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene32656 | 0.88335 | 4.84E-71 | -1.69E-46 |
| MS.gene050502 | MS.gene32656 | 0.824611 | 7.35E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene32656 | 0.901616 | 2.24E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene32656 | 0.896928 | 2.30E-76 | -1.69E-46 |
| MS.gene050577 | MS.gene32656 | 0.866484 | 2.76E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene32656 | 0.905768 | 3.03E-80 | -1.69E-46 |
| MS.gene050662 | MS.gene32656 | 0.842696 | 2.21E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene32656 | 0.870257 | 1.67E-66 | -1.69E-46 |
| MS.gene050686 | MS.gene32656 | 0.809161 | 2.17E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene32656 | 0.889894 | 1.61E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene32656 | 0.851278 | 9.85E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene32656 | 0.904787 | 8.51E-80 | -1.69E-46 |
| MS.gene05080 | MS.gene32656 | 0.859407 | 4.23E-63 | -1.69E-46 |
| MS.gene050868 | MS.gene32656 | 0.863408 | 2.54E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene32656 | 0.8634 | 2.56E-64 | -1.69E-46 |
| MS.gene050876 | MS.gene32656 | 0.852237 | 5.27E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene32656 | 0.826607 | 2.47E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene32656 | 0.845998 | 2.86E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene32656 | 0.889909 | 1.59E-73 | -1.69E-46 |
| MS.gene05100 | MS.gene32656 | 0.861237 | 1.18E-63 | -1.69E-46 |
| MS.gene051268 | MS.gene32656 | 0.825227 | 5.26E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene32656 | 0.822429 | 2.38E-53 | -1.69E-46 |
| MS.gene051364 | MS.gene32656 | -0.801035 | 1.09E-48 | -1.69E-46 |
| MS.gene051366 | MS.gene32656 | -0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene32656 | 0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene32656 | 0.883041 | 6.27E-71 | -1.69E-46 |
| MS.gene051810 | MS.gene32656 | 0.869428 | 3.12E-66 | -1.69E-46 |
| MS.gene051858 | MS.gene32656 | 0.836556 | 8.73E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene32656 | 0.808481 | 3.03E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene32656 | 0.82813 | 1.07E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene32656 | 0.862378 | 5.29E-64 | -1.69E-46 |
| MS.gene052271 | MS.gene32656 | 0.84044 | 8.69E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene32656 | 0.874993 | 4.37E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene32656 | 0.87792 | 4.26E-69 | -1.69E-46 |
| MS.gene052503 | MS.gene32656 | 0.839743 | 1.32E-57 | -1.69E-46 |
| MS.gene052504 | MS.gene32656 | 0.802951 | 4.40E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene32656 | 0.85298 | 3.23E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene32656 | 0.864358 | 1.29E-64 | -1.69E-46 |
| MS.gene052822 | MS.gene32656 | 0.869395 | 3.20E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene32656 | 0.835921 | 1.27E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene32656 | 0.825507 | 4.52E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene32656 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene32656 | 0.884225 | 2.30E-71 | -1.69E-46 |
| MS.gene052966 | MS.gene32656 | 0.852119 | 5.69E-61 | -1.69E-46 |
| MS.gene053018 | MS.gene32656 | 0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene32656 | 0.841342 | 5.04E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene32656 | 0.821063 | 4.93E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene32656 | 0.896266 | 4.35E-76 | -1.69E-46 |
| MS.gene053286 | MS.gene32656 | 0.898235 | 6.47E-77 | -1.69E-46 |
| MS.gene053420 | MS.gene32656 | -0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene32656 | 0.860188 | 2.46E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene32656 | 0.815487 | 9.01E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene32656 | 0.823139 | 1.63E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene32656 | -0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene32656 | 0.894912 | 1.58E-75 | -1.69E-46 |
| MS.gene053626 | MS.gene32656 | 0.845982 | 2.89E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene32656 | 0.853243 | 2.72E-61 | -1.69E-46 |
| MS.gene053633 | MS.gene32656 | 0.829573 | 4.77E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene32656 | 0.854887 | 9.12E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene32656 | 0.862543 | 4.71E-64 | -1.69E-46 |
| MS.gene054003 | MS.gene32656 | 0.812363 | 4.40E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene32656 | 0.853744 | 1.95E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene32656 | 0.862897 | 3.66E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene32656 | 0.872966 | 2.12E-67 | -1.69E-46 |
| MS.gene054642 | MS.gene32656 | 0.904101 | 1.74E-79 | -1.69E-46 |
| MS.gene05470 | MS.gene32656 | 0.840805 | 6.97E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene32656 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene32656 | 0.922224 | 1.30E-88 | -1.69E-46 |
| MS.gene05505 | MS.gene32656 | 0.823063 | 1.69E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene32656 | -0.830064 | 3.62E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene32656 | 0.813069 | 3.08E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene32656 | 0.833847 | 4.22E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene32656 | 0.821166 | 4.66E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene32656 | 0.917386 | 5.66E-86 | -1.69E-46 |
| MS.gene055502 | MS.gene32656 | 0.896224 | 4.53E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene32656 | 0.846982 | 1.54E-59 | -1.69E-46 |
| MS.gene055634 | MS.gene32656 | 0.843278 | 1.55E-58 | -1.69E-46 |
| MS.gene055638 | MS.gene32656 | 0.82991 | 3.95E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene32656 | 0.880981 | 3.51E-70 | -1.69E-46 |
| MS.gene055748 | MS.gene32656 | 0.859134 | 5.10E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene32656 | 0.88529 | 9.24E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene32656 | 0.870479 | 1.42E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene32656 | 0.893438 | 6.29E-75 | -1.69E-46 |
| MS.gene055849 | MS.gene32656 | 0.864208 | 1.43E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene32656 | 0.874619 | 5.86E-68 | -1.69E-46 |
| MS.gene05592 | MS.gene32656 | 0.803723 | 3.04E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene32656 | 0.828691 | 7.81E-55 | -1.69E-46 |
| MS.gene055942 | MS.gene32656 | -0.816694 | 4.84E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene32656 | 0.864568 | 1.11E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene32656 | 0.804877 | 1.75E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene32656 | 0.849022 | 4.22E-60 | -1.69E-46 |
| MS.gene056409 | MS.gene32656 | 0.800901 | 1.16E-48 | -1.69E-46 |
| MS.gene056446 | MS.gene32656 | 0.856483 | 3.12E-62 | -1.69E-46 |
| MS.gene056448 | MS.gene32656 | 0.812789 | 3.55E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene32656 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene32656 | 0.924608 | 5.61E-90 | -1.69E-46 |
| MS.gene056510 | MS.gene32656 | 0.909781 | 3.89E-82 | -1.69E-46 |
| MS.gene056549 | MS.gene32656 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene32656 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene32656 | 0.931422 | 3.87E-94 | -1.69E-46 |
| MS.gene056692 | MS.gene32656 | 0.834298 | 3.25E-56 | -1.69E-46 |
| MS.gene056878 | MS.gene32656 | 0.834315 | 3.22E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene32656 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene32656 | 0.858776 | 6.53E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene32656 | 0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene32656 | 0.821294 | 4.36E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene32656 | 0.845613 | 3.64E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene32656 | 0.806986 | 6.30E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene32656 | 0.85335 | 2.53E-61 | -1.69E-46 |
| MS.gene057872 | MS.gene32656 | 0.815521 | 8.86E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene32656 | 0.833261 | 5.90E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene32656 | 0.842574 | 2.38E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene32656 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene32656 | -0.825262 | 5.16E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene32656 | 0.844179 | 8.87E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene32656 | 0.852153 | 5.56E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene32656 | 0.918852 | 9.34E-87 | -1.69E-46 |
| MS.gene058544 | MS.gene32656 | 0.855249 | 7.16E-62 | -1.69E-46 |
| MS.gene058719 | MS.gene32656 | 0.810053 | 1.40E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene32656 | 0.852744 | 3.77E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene32656 | 0.880207 | 6.64E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene32656 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene32656 | 0.916127 | 2.59E-85 | -1.69E-46 |
| MS.gene059023 | MS.gene32656 | 0.857861 | 1.22E-62 | -1.69E-46 |
| MS.gene059029 | MS.gene32656 | 0.820187 | 7.83E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene32656 | 0.871794 | 5.21E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene32656 | 0.851191 | 1.04E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene32656 | 0.807533 | 4.82E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene32656 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene32656 | 0.902656 | 7.75E-79 | -1.69E-46 |
| MS.gene059701 | MS.gene32656 | -0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene32656 | -0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene32656 | 0.888976 | 3.66E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene32656 | 0.837054 | 6.52E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene32656 | 0.837171 | 6.08E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene32656 | 0.849547 | 3.01E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene32656 | 0.907144 | 6.96E-81 | -1.69E-46 |
| MS.gene059902 | MS.gene32656 | 0.829944 | 3.88E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene32656 | 0.829913 | 3.94E-55 | -1.69E-46 |
| MS.gene060337 | MS.gene32656 | -0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene32656 | 0.871741 | 5.43E-67 | -1.69E-46 |
| MS.gene060526 | MS.gene32656 | 0.833496 | 5.16E-56 | -1.69E-46 |
| MS.gene060595 | MS.gene32656 | -0.828525 | 8.57E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene32656 | 0.898921 | 3.30E-77 | -1.69E-46 |
| MS.gene060762 | MS.gene32656 | 0.86588 | 4.28E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene32656 | 0.884887 | 1.31E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene32656 | 0.894254 | 2.93E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene32656 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene32656 | 0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene32656 | 0.838122 | 3.47E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene32656 | 0.887952 | 9.07E-73 | -1.69E-46 |
| MS.gene061134 | MS.gene32656 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene32656 | 0.848009 | 8.05E-60 | -1.69E-46 |
| MS.gene061171 | MS.gene32656 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene32656 | 0.800015 | 1.76E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32656.t1 | MTR_3g106740 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 1.83e-85 | 245 |
| MS.gene32656.t1 | MTR_1g012690 | 59.091 | 154 | 37 | 3 | 1 | 129 | 1 | 153 | 9.54e-51 | 158 |
| MS.gene32656.t1 | MTR_1g012700 | 57.317 | 164 | 34 | 3 | 1 | 129 | 1 | 163 | 1.26e-50 | 158 |
| MS.gene32656.t1 | MTR_3g106750 | 73.282 | 131 | 30 | 2 | 1 | 129 | 1 | 128 | 1.63e-48 | 152 |
| MS.gene32656.t1 | MTR_1g012710 | 59.868 | 152 | 38 | 2 | 1 | 130 | 1 | 151 | 8.63e-48 | 150 |
| MS.gene32656.t1 | MTR_1g012630 | 78.571 | 84 | 17 | 1 | 46 | 129 | 127 | 209 | 4.82e-40 | 133 |
| MS.gene32656.t1 | MTR_4g108150 | 52.459 | 122 | 53 | 2 | 8 | 129 | 6 | 122 | 5.54e-35 | 117 |
| MS.gene32656.t1 | MTR_4g101260 | 51.969 | 127 | 55 | 3 | 8 | 129 | 6 | 131 | 7.44e-34 | 115 |
| MS.gene32656.t1 | MTR_2g026760 | 60.360 | 111 | 40 | 4 | 21 | 129 | 18 | 126 | 1.19e-33 | 114 |
| MS.gene32656.t1 | MTR_4g101280 | 63.218 | 87 | 30 | 2 | 44 | 129 | 57 | 142 | 2.53e-31 | 108 |
| MS.gene32656.t1 | MTR_4g101330 | 63.953 | 86 | 29 | 2 | 45 | 129 | 84 | 168 | 3.38e-30 | 107 |
| MS.gene32656.t1 | MTR_4g101310 | 60.000 | 85 | 32 | 2 | 46 | 129 | 50 | 133 | 2.55e-29 | 103 |
| MS.gene32656.t1 | MTR_4g101270 | 58.824 | 85 | 32 | 3 | 47 | 130 | 105 | 187 | 1.03e-23 | 90.9 |
| MS.gene32656.t1 | MTR_5g012340 | 44.828 | 87 | 45 | 2 | 44 | 129 | 92 | 176 | 8.45e-23 | 88.2 |
| MS.gene32656.t1 | MTR_5g012380 | 43.678 | 87 | 46 | 2 | 44 | 129 | 85 | 169 | 3.64e-22 | 86.7 |
| MS.gene32656.t1 | MTR_2g026920 | 45.679 | 81 | 41 | 2 | 50 | 130 | 118 | 195 | 2.45e-17 | 74.3 |
| MS.gene32656.t1 | MTR_2g026930 | 46.250 | 80 | 40 | 2 | 50 | 129 | 122 | 198 | 2.47e-17 | 74.7 |
| MS.gene32656.t1 | MTR_3g082100 | 44.828 | 87 | 47 | 1 | 44 | 130 | 251 | 336 | 1.60e-15 | 71.6 |
| MS.gene32656.t1 | MTR_2g026775 | 48.718 | 78 | 34 | 3 | 54 | 129 | 686 | 759 | 2.15e-15 | 71.6 |
| MS.gene32656.t1 | MTR_4g115360 | 54.023 | 87 | 37 | 3 | 44 | 129 | 148 | 232 | 5.27e-13 | 63.5 |
| MS.gene32656.t1 | MTR_2g026820 | 52.113 | 71 | 29 | 3 | 52 | 121 | 542 | 608 | 1.85e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32656.t1 | AT2G45180 | 74.419 | 86 | 21 | 1 | 44 | 129 | 49 | 133 | 3.27e-37 | 123 |
| MS.gene32656.t1 | AT1G62510 | 68.235 | 85 | 25 | 2 | 46 | 129 | 66 | 149 | 7.74e-33 | 113 |
| MS.gene32656.t1 | AT4G12490 | 41.758 | 182 | 52 | 4 | 1 | 129 | 1 | 181 | 7.86e-32 | 111 |
| MS.gene32656.t1 | AT4G12480 | 64.368 | 87 | 29 | 2 | 44 | 129 | 82 | 167 | 1.01e-31 | 110 |
| MS.gene32656.t1 | AT4G12470 | 61.111 | 90 | 33 | 2 | 42 | 130 | 73 | 161 | 1.75e-31 | 110 |
| MS.gene32656.t1 | AT5G46890 | 54.962 | 131 | 52 | 5 | 1 | 129 | 1 | 126 | 1.89e-31 | 108 |
| MS.gene32656.t1 | AT4G12500 | 64.368 | 87 | 29 | 2 | 44 | 129 | 91 | 176 | 2.45e-31 | 110 |
| MS.gene32656.t1 | AT5G46900 | 69.663 | 89 | 23 | 3 | 41 | 129 | 42 | 126 | 2.66e-31 | 108 |
| MS.gene32656.t1 | AT1G12090 | 68.293 | 82 | 24 | 2 | 49 | 129 | 57 | 137 | 3.57e-31 | 108 |
| MS.gene32656.t1 | AT4G00165 | 54.808 | 104 | 43 | 3 | 29 | 129 | 26 | 128 | 5.86e-31 | 107 |
| MS.gene32656.t1 | AT4G00165 | 54.808 | 104 | 43 | 3 | 29 | 129 | 26 | 128 | 5.86e-31 | 107 |
| MS.gene32656.t1 | AT4G12520 | 54.198 | 131 | 55 | 5 | 1 | 129 | 1 | 128 | 2.93e-30 | 105 |
| MS.gene32656.t1 | AT4G12510 | 54.198 | 131 | 55 | 5 | 1 | 129 | 1 | 128 | 2.93e-30 | 105 |
| MS.gene32656.t1 | AT4G22460 | 51.852 | 108 | 52 | 0 | 23 | 130 | 26 | 133 | 3.48e-29 | 103 |
| MS.gene32656.t1 | AT4G12550 | 56.977 | 86 | 35 | 2 | 45 | 129 | 26 | 110 | 2.27e-28 | 100 |
| MS.gene32656.t1 | AT1G12100 | 43.651 | 126 | 65 | 4 | 7 | 129 | 9 | 131 | 3.60e-27 | 98.2 |
| MS.gene32656.t1 | AT4G12545 | 56.180 | 89 | 34 | 3 | 42 | 129 | 23 | 107 | 7.49e-26 | 94.0 |
| MS.gene32656.t1 | AT4G12530 | 47.126 | 87 | 45 | 1 | 44 | 130 | 31 | 116 | 9.77e-23 | 86.3 |
| MS.gene32656.t1 | AT3G22142 | 56.977 | 86 | 32 | 4 | 47 | 130 | 1397 | 1479 | 1.04e-22 | 92.8 |
| MS.gene32656.t1 | AT2G10940 | 55.172 | 87 | 36 | 3 | 44 | 129 | 205 | 289 | 1.32e-21 | 87.4 |
| MS.gene32656.t1 | AT2G10940 | 55.172 | 87 | 36 | 3 | 44 | 129 | 205 | 289 | 1.32e-21 | 87.4 |
| MS.gene32656.t1 | AT3G22120 | 49.412 | 85 | 41 | 2 | 47 | 130 | 267 | 350 | 1.48e-18 | 80.1 |
| MS.gene32656.t1 | AT4G15160 | 50.000 | 86 | 40 | 3 | 47 | 130 | 99 | 183 | 1.74e-18 | 77.4 |
| MS.gene32656.t1 | AT3G22120 | 49.412 | 85 | 41 | 2 | 47 | 130 | 250 | 333 | 2.54e-18 | 79.3 |
| MS.gene32656.t1 | AT4G15160 | 50.000 | 86 | 40 | 3 | 47 | 130 | 181 | 265 | 5.52e-18 | 77.8 |
| MS.gene32656.t1 | AT4G22490 | 37.500 | 96 | 53 | 3 | 37 | 130 | 27 | 117 | 6.63e-16 | 68.9 |
| MS.gene32656.t1 | AT1G62500 | 43.529 | 85 | 45 | 3 | 47 | 130 | 212 | 294 | 6.34e-15 | 69.7 |
Find 42 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATGCTGTGCATTGATTA+AGG | 0.212710 | 3.1:+84593056 | MS.gene32656:CDS |
| AGCACAAACCCCTAGCTTTA+AGG | 0.218235 | 3.1:-84592983 | None:intergenic |
| GGGTTGGTTAATGTTGTTAT+TGG | 0.240421 | 3.1:+84593015 | MS.gene32656:CDS |
| TCCTTAGGGCATTGACCTTT+GGG | 0.253417 | 3.1:-84592958 | None:intergenic |
| ATCCTTAGGGCATTGACCTT+TGG | 0.263717 | 3.1:-84592959 | None:intergenic |
| GATTAAGGGTTTGGCTGATT+TGG | 0.309202 | 3.1:+84593071 | MS.gene32656:CDS |
| AAGAGAAAGCACTAAAATTA+AGG | 0.315935 | 3.1:-84592854 | None:intergenic |
| TTGTCTTTGCACTGCACTTA+AGG | 0.338630 | 3.1:+84593104 | MS.gene32656:CDS |
| CCTAGCTTTAAGGTATCCTT+AGG | 0.341849 | 3.1:-84592973 | None:intergenic |
| AAATGCTGTGCATTGATTAA+GGG | 0.392685 | 3.1:+84593057 | MS.gene32656:CDS |
| CTGTGCATTGATTAAGGGTT+TGG | 0.411029 | 3.1:+84593062 | MS.gene32656:CDS |
| GAAGGTGTTGGCTTTGGTGA+TGG | 0.414445 | 3.1:-84592913 | None:intergenic |
| CCTTTGGGTGAAGGTGGAAC+AGG | 0.427685 | 3.1:-84592943 | None:intergenic |
| GTTATTGGAAACCCTCCTTC+AGG | 0.428430 | 3.1:+84593030 | MS.gene32656:CDS |
| AGGAGCACGCTGAGCGTGAT+AGG | 0.432511 | 3.1:-84593156 | None:intergenic |
| GGGCATTGACCTTTGGGTGA+AGG | 0.436950 | 3.1:-84592952 | None:intergenic |
| AATTAAGGCAGAGAATTTGT+TGG | 0.438270 | 3.1:-84592839 | None:intergenic |
| GCAGGTGAAGGTGTTGGCTT+TGG | 0.458002 | 3.1:-84592919 | None:intergenic |
| TAAGGGTTTGGCTGATTTGG+AGG | 0.464987 | 3.1:+84593074 | MS.gene32656:CDS |
| ATTGGAATCCTTAGGGACAT+TGG | 0.481064 | 3.1:-84593212 | None:intergenic |
| GGTGAAGGTGGAACAGGAGC+AGG | 0.481606 | 3.1:-84592937 | None:intergenic |
| GCACTTAAGGCTAATGTGCT+TGG | 0.487972 | 3.1:+84593117 | MS.gene32656:CDS |
| CCTGGTTTCCAATGTCCCTA+AGG | 0.488513 | 3.1:+84593204 | MS.gene32656:CDS |
| CCTAAGGATACCTTAAAGCT+AGG | 0.505679 | 3.1:+84592973 | MS.gene32656:CDS |
| CTAAGGATACCTTAAAGCTA+GGG | 0.512185 | 3.1:+84592974 | MS.gene32656:CDS |
| GGTGTTGGCTTTGGTGATGG+TGG | 0.522065 | 3.1:-84592910 | None:intergenic |
| CATTGACCTTTGGGTGAAGG+TGG | 0.538821 | 3.1:-84592949 | None:intergenic |
| CCTTAGGGACATTGGAAACC+AGG | 0.543402 | 3.1:-84593204 | None:intergenic |
| ACATTGGAAACCAGGAGGGA+CGG | 0.567925 | 3.1:-84593196 | None:intergenic |
| CCTGTTCCACCTTCACCCAA+AGG | 0.572122 | 3.1:+84592943 | MS.gene32656:CDS |
| CTAGCTTTAAGGTATCCTTA+GGG | 0.574702 | 3.1:-84592972 | None:intergenic |
| ACAGGAGCAGGTGAAGGTGT+TGG | 0.576951 | 3.1:-84592925 | None:intergenic |
| TGATGGTGGACAATTAGCTT+CGG | 0.580942 | 3.1:-84592896 | None:intergenic |
| ACCCAAAGGTCAATGCCCTA+AGG | 0.586732 | 3.1:+84592957 | MS.gene32656:CDS |
| GGTGGAACAGGAGCAGGTGA+AGG | 0.595926 | 3.1:-84592931 | None:intergenic |
| AGCTTCGGTGAATGTTGAGT+AGG | 0.595958 | 3.1:-84592881 | None:intergenic |
| AGCATTTACTACCTGAAGGA+GGG | 0.596627 | 3.1:-84593041 | None:intergenic |
| CAGCATTTACTACCTGAAGG+AGG | 0.605436 | 3.1:-84593042 | None:intergenic |
| TAAGGATACCTTAAAGCTAG+GGG | 0.646982 | 3.1:+84592975 | MS.gene32656:CDS |
| GCACAGCATTTACTACCTGA+AGG | 0.650957 | 3.1:-84593045 | None:intergenic |
| AGGGACATTGGAAACCAGGA+GGG | 0.669232 | 3.1:-84593200 | None:intergenic |
| TAGGGACATTGGAAACCAGG+AGG | 0.715268 | 3.1:-84593201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAGAAAGCACTAAAATTA+AGG | - | chr3.1:84592857-84592876 | None:intergenic | 25.0% |
| AATTAAGGCAGAGAATTTGT+TGG | - | chr3.1:84592842-84592861 | None:intergenic | 30.0% | |
| !! | AAATGCTGTGCATTGATTAA+GGG | + | chr3.1:84593057-84593076 | MS.gene32656:CDS | 30.0% |
| !! | TAAATGCTGTGCATTGATTA+AGG | + | chr3.1:84593056-84593075 | MS.gene32656:CDS | 30.0% |
| CTAAGGATACCTTAAAGCTA+GGG | + | chr3.1:84592974-84592993 | MS.gene32656:CDS | 35.0% | |
| TAAGGATACCTTAAAGCTAG+GGG | + | chr3.1:84592975-84592994 | MS.gene32656:CDS | 35.0% | |
| !! | CTAGCTTTAAGGTATCCTTA+GGG | - | chr3.1:84592975-84592994 | None:intergenic | 35.0% |
| !! | GGGTTGGTTAATGTTGTTAT+TGG | + | chr3.1:84593015-84593034 | MS.gene32656:CDS | 35.0% |
| AGCATTTACTACCTGAAGGA+GGG | - | chr3.1:84593044-84593063 | None:intergenic | 40.0% | |
| CCTAAGGATACCTTAAAGCT+AGG | + | chr3.1:84592973-84592992 | MS.gene32656:CDS | 40.0% | |
| GATTAAGGGTTTGGCTGATT+TGG | + | chr3.1:84593071-84593090 | MS.gene32656:CDS | 40.0% | |
| TTGTCTTTGCACTGCACTTA+AGG | + | chr3.1:84593104-84593123 | MS.gene32656:CDS | 40.0% | |
| !! | CCTAGCTTTAAGGTATCCTT+AGG | - | chr3.1:84592976-84592995 | None:intergenic | 40.0% |
| !! | CTGTGCATTGATTAAGGGTT+TGG | + | chr3.1:84593062-84593081 | MS.gene32656:CDS | 40.0% |
| !! | GGGTTTGTGCTGATCTTTTA+GGG | + | chr3.1:84592995-84593014 | MS.gene32656:CDS | 40.0% |
| !! | TGATGGTGGACAATTAGCTT+CGG | - | chr3.1:84592899-84592918 | None:intergenic | 40.0% |
| !!! | CGGTTTTTTGACATGCACTA+AGG | - | chr3.1:84593179-84593198 | None:intergenic | 40.0% |
| !!! | TTGTGCTGATCTTTTAGGGT+TGG | + | chr3.1:84592999-84593018 | MS.gene32656:CDS | 40.0% |
| AGCTTCGGTGAATGTTGAGT+AGG | - | chr3.1:84592884-84592903 | None:intergenic | 45.0% | |
| CAGCATTTACTACCTGAAGG+AGG | - | chr3.1:84593045-84593064 | None:intergenic | 45.0% | |
| GCACAGCATTTACTACCTGA+AGG | - | chr3.1:84593048-84593067 | None:intergenic | 45.0% | |
| GCACTTAAGGCTAATGTGCT+TGG | + | chr3.1:84593117-84593136 | MS.gene32656:CDS | 45.0% | |
| GTTATTGGAAACCCTCCTTC+AGG | + | chr3.1:84593030-84593049 | MS.gene32656:CDS | 45.0% | |
| !! | AGCACAAACCCCTAGCTTTA+AGG | - | chr3.1:84592986-84593005 | None:intergenic | 45.0% |
| !! | ATCCTTAGGGCATTGACCTT+TGG | - | chr3.1:84592962-84592981 | None:intergenic | 45.0% |
| !! | GGGGTTTGTGCTGATCTTTT+AGG | + | chr3.1:84592994-84593013 | MS.gene32656:CDS | 45.0% |
| !! | TAAGGGTTTGGCTGATTTGG+AGG | + | chr3.1:84593074-84593093 | MS.gene32656:CDS | 45.0% |
| !! | TCCTTAGGGCATTGACCTTT+GGG | - | chr3.1:84592961-84592980 | None:intergenic | 45.0% |
| ACATTGGAAACCAGGAGGGA+CGG | - | chr3.1:84593199-84593218 | None:intergenic | 50.0% | |
| ACCCAAAGGTCAATGCCCTA+AGG | + | chr3.1:84592957-84592976 | MS.gene32656:CDS | 50.0% | |
| AGGGACATTGGAAACCAGGA+GGG | - | chr3.1:84593203-84593222 | None:intergenic | 50.0% | |
| CATTGACCTTTGGGTGAAGG+TGG | - | chr3.1:84592952-84592971 | None:intergenic | 50.0% | |
| TAGGGACATTGGAAACCAGG+AGG | - | chr3.1:84593204-84593223 | None:intergenic | 50.0% | |
| TGTCAAAAAACCGTCCCTCC+TGG | + | chr3.1:84593186-84593205 | MS.gene32656:CDS | 50.0% | |
| !! | GAAGGTGTTGGCTTTGGTGA+TGG | - | chr3.1:84592916-84592935 | None:intergenic | 50.0% |
| CCTGTTCCACCTTCACCCAA+AGG | + | chr3.1:84592943-84592962 | MS.gene32656:CDS | 55.0% | |
| CCTTTGGGTGAAGGTGGAAC+AGG | - | chr3.1:84592946-84592965 | None:intergenic | 55.0% | |
| ! | ACAGGAGCAGGTGAAGGTGT+TGG | - | chr3.1:84592928-84592947 | None:intergenic | 55.0% |
| !! | GCAGGTGAAGGTGTTGGCTT+TGG | - | chr3.1:84592922-84592941 | None:intergenic | 55.0% |
| !! | GGGCATTGACCTTTGGGTGA+AGG | - | chr3.1:84592955-84592974 | None:intergenic | 55.0% |
| !! | GGTGTTGGCTTTGGTGATGG+TGG | - | chr3.1:84592913-84592932 | None:intergenic | 55.0% |
| GGTGAAGGTGGAACAGGAGC+AGG | - | chr3.1:84592940-84592959 | None:intergenic | 60.0% | |
| GGTGGAACAGGAGCAGGTGA+AGG | - | chr3.1:84592934-84592953 | None:intergenic | 60.0% | |
| ! | AGGAGCACGCTGAGCGTGAT+AGG | - | chr3.1:84593159-84593178 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 84592832 | 84593224 | 84592832 | ID=MS.gene32656 |
| chr3.1 | mRNA | 84592832 | 84593224 | 84592832 | ID=MS.gene32656.t1;Parent=MS.gene32656 |
| chr3.1 | exon | 84592832 | 84593224 | 84592832 | ID=MS.gene32656.t1.exon1;Parent=MS.gene32656.t1 |
| chr3.1 | CDS | 84592832 | 84593224 | 84592832 | ID=cds.MS.gene32656.t1;Parent=MS.gene32656.t1 |
| Gene Sequence |
| Protein sequence |
