Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85638.t1 | XP_003603500.1 | 99.4 | 624 | 4 | 0 | 1 | 624 | 1 | 624 | 0.00E+00 | 1234.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85638.t1 | P92960 | 58.9 | 616 | 231 | 7 | 21 | 623 | 55 | 661 | 2.9e-196 | 686.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85638.t1 | G7JC98 | 99.4 | 624 | 4 | 0 | 1 | 624 | 1 | 624 | 0.0e+00 | 1234.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene85638 | -0.827036 | 1.95E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene85638 | -0.853316 | 2.59E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene85638 | -0.835964 | 1.23E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene85638 | -0.812401 | 4.32E-51 | -1.69E-46 |
| MS.gene049259 | MS.gene85638 | 0.815267 | 1.01E-51 | -1.69E-46 |
| MS.gene049265 | MS.gene85638 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene85638 | -0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene85638 | -0.846369 | 2.27E-59 | -1.69E-46 |
| MS.gene049402 | MS.gene85638 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene85638 | 0.862302 | 5.58E-64 | -1.69E-46 |
| MS.gene049633 | MS.gene85638 | -0.826618 | 2.46E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene85638 | 0.840129 | 1.05E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene85638 | -0.807844 | 4.14E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene85638 | -0.82893 | 6.84E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene85638 | -0.833754 | 4.45E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene85638 | -0.838244 | 3.23E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene85638 | -0.848284 | 6.76E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene85638 | -0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene85638 | 0.832253 | 1.05E-55 | -1.69E-46 |
| MS.gene050381 | MS.gene85638 | 0.874545 | 6.21E-68 | -1.69E-46 |
| MS.gene050444 | MS.gene85638 | -0.844099 | 9.32E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene85638 | -0.858442 | 8.21E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene85638 | -0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene85638 | -0.811419 | 7.07E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene85638 | -0.866457 | 2.81E-65 | -1.69E-46 |
| MS.gene050662 | MS.gene85638 | -0.826663 | 2.40E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene85638 | -0.835667 | 1.47E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene85638 | -0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene85638 | -0.813719 | 2.22E-51 | -1.69E-46 |
| MS.gene05079 | MS.gene85638 | 0.835512 | 1.61E-56 | -1.69E-46 |
| MS.gene050809 | MS.gene85638 | 0.854601 | 1.10E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene85638 | -0.824152 | 9.42E-54 | -1.69E-46 |
| MS.gene050832 | MS.gene85638 | 0.804282 | 2.33E-49 | -1.69E-46 |
| MS.gene050833 | MS.gene85638 | 0.834151 | 3.54E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene85638 | -0.845631 | 3.60E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene85638 | -0.846988 | 1.54E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene85638 | 0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene85638 | -0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene85638 | -0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene85638 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene85638 | 0.858787 | 6.48E-63 | -1.69E-46 |
| MS.gene051127 | MS.gene85638 | 0.830996 | 2.14E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene85638 | 0.855627 | 5.56E-62 | -1.69E-46 |
| MS.gene051228 | MS.gene85638 | -0.81601 | 6.89E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene85638 | -0.807967 | 3.90E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene85638 | -0.806945 | 6.43E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene85638 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene85638 | 0.810227 | 1.28E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene85638 | -0.804317 | 2.29E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene85638 | 0.824077 | 9.81E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene85638 | 0.832803 | 7.68E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene85638 | -0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene051863 | MS.gene85638 | 0.872209 | 3.79E-67 | -1.69E-46 |
| MS.gene052129 | MS.gene85638 | 0.800555 | 1.36E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene85638 | -0.836024 | 1.19E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene85638 | -0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene85638 | 0.819903 | 9.09E-53 | -1.69E-46 |
| MS.gene05244 | MS.gene85638 | 0.811197 | 7.90E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene85638 | -0.809066 | 2.27E-50 | -1.69E-46 |
| MS.gene052805 | MS.gene85638 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene85638 | -0.805385 | 1.37E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene85638 | -0.819963 | 8.81E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene85638 | -0.809266 | 2.06E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene85638 | -0.813114 | 3.02E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene85638 | -0.801794 | 7.61E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene85638 | -0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene85638 | 0.860333 | 2.22E-63 | -1.69E-46 |
| MS.gene053421 | MS.gene85638 | 0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene053488 | MS.gene85638 | 0.833291 | 5.80E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene85638 | 0.846697 | 1.85E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene85638 | -0.841765 | 3.90E-58 | -1.69E-46 |
| MS.gene053776 | MS.gene85638 | 0.817633 | 2.98E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene85638 | -0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene85638 | -0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene85638 | -0.811741 | 6.02E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene85638 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene85638 | 0.831715 | 1.43E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene85638 | -0.838652 | 2.53E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene85638 | -0.836819 | 7.48E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene85638 | 0.871394 | 7.07E-67 | -1.69E-46 |
| MS.gene054707 | MS.gene85638 | 0.837826 | 4.13E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene85638 | 0.829029 | 6.47E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene85638 | -0.802443 | 5.60E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene85638 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene85638 | -0.835286 | 1.83E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene85638 | 0.862042 | 6.71E-64 | -1.69E-46 |
| MS.gene055154 | MS.gene85638 | 0.856167 | 3.86E-62 | -1.69E-46 |
| MS.gene055202 | MS.gene85638 | 0.839448 | 1.58E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene85638 | -0.829576 | 4.76E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene85638 | -0.801473 | 8.86E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene85638 | -0.834665 | 2.63E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene85638 | -0.863663 | 2.12E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene85638 | -0.831244 | 1.86E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene85638 | -0.822712 | 2.05E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene85638 | -0.81821 | 2.21E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene85638 | -0.826172 | 3.14E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene85638 | -0.807978 | 3.88E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene85638 | -0.833318 | 5.71E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene85638 | 0.815216 | 1.04E-51 | -1.69E-46 |
| MS.gene055956 | MS.gene85638 | 0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene85638 | 0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene056224 | MS.gene85638 | 0.827853 | 1.24E-54 | -1.69E-46 |
| MS.gene056387 | MS.gene85638 | -0.836738 | 7.85E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene85638 | -0.833307 | 5.75E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene85638 | -0.85717 | 1.96E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene85638 | -0.819425 | 1.17E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene85638 | -0.812326 | 4.49E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene85638 | 0.812471 | 4.17E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene85638 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene85638 | -0.853025 | 3.14E-61 | -1.69E-46 |
| MS.gene056856 | MS.gene85638 | 0.85604 | 4.21E-62 | -1.69E-46 |
| MS.gene056857 | MS.gene85638 | 0.825119 | 5.58E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene85638 | -0.824495 | 7.83E-54 | -1.69E-46 |
| MS.gene057246 | MS.gene85638 | -0.800135 | 1.66E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene85638 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene85638 | 0.8256 | 4.29E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene85638 | -0.821396 | 4.13E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene85638 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene058093 | MS.gene85638 | 0.88698 | 2.13E-72 | -1.69E-46 |
| MS.gene058099 | MS.gene85638 | 0.886027 | 4.89E-72 | -1.69E-46 |
| MS.gene058109 | MS.gene85638 | 0.828982 | 6.64E-55 | -1.69E-46 |
| MS.gene058111 | MS.gene85638 | 0.808869 | 2.50E-50 | -1.69E-46 |
| MS.gene058117 | MS.gene85638 | 0.824647 | 7.21E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene85638 | -0.819431 | 1.17E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene85638 | 0.855852 | 4.78E-62 | -1.69E-46 |
| MS.gene058173 | MS.gene85638 | 0.842156 | 3.07E-58 | -1.69E-46 |
| MS.gene058175 | MS.gene85638 | 0.858489 | 7.95E-63 | -1.69E-46 |
| MS.gene058179 | MS.gene85638 | 0.815245 | 1.02E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene85638 | 0.808667 | 2.77E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene85638 | 0.806265 | 8.95E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene85638 | 0.801279 | 9.70E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene85638 | -0.807196 | 5.69E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene85638 | -0.839312 | 1.71E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene85638 | -0.827833 | 1.26E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene85638 | 0.811013 | 8.66E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene85638 | -0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene85638 | -0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene85638 | -0.81329 | 2.76E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene85638 | 0.857675 | 1.39E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene85638 | -0.847871 | 8.79E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene85638 | -0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene85638 | 0.839036 | 2.01E-57 | -1.69E-46 |
| MS.gene059038 | MS.gene85638 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene85638 | 0.858222 | 9.56E-63 | -1.69E-46 |
| MS.gene059069 | MS.gene85638 | 0.815331 | 9.77E-52 | -1.69E-46 |
| MS.gene059070 | MS.gene85638 | 0.819502 | 1.12E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene85638 | -0.83418 | 3.48E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene85638 | -0.804736 | 1.87E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene85638 | -0.834905 | 2.29E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene85638 | -0.841976 | 3.43E-58 | -1.69E-46 |
| MS.gene059682 | MS.gene85638 | 0.848623 | 5.45E-60 | -1.69E-46 |
| MS.gene059690 | MS.gene85638 | 0.813674 | 2.27E-51 | -1.69E-46 |
| MS.gene059691 | MS.gene85638 | 0.821383 | 4.16E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene85638 | 0.824954 | 6.10E-54 | -1.69E-46 |
| MS.gene059697 | MS.gene85638 | 0.833105 | 6.46E-56 | -1.69E-46 |
| MS.gene059699 | MS.gene85638 | 0.840748 | 7.21E-58 | -1.69E-46 |
| MS.gene059703 | MS.gene85638 | 0.847864 | 8.83E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene85638 | -0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene85638 | -0.859463 | 4.06E-63 | -1.69E-46 |
| MS.gene059943 | MS.gene85638 | 0.803231 | 3.85E-49 | -1.69E-46 |
| MS.gene059944 | MS.gene85638 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene060341 | MS.gene85638 | -0.817283 | 3.57E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene85638 | 0.845011 | 5.30E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene85638 | -0.835673 | 1.46E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene85638 | -0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene85638 | 0.835128 | 2.01E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene85638 | -0.850112 | 2.10E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene85638 | -0.826654 | 2.41E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene85638 | -0.813688 | 2.25E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene85638 | -0.810109 | 1.36E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene85638 | 0.831089 | 2.03E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene85638 | -0.828494 | 8.71E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene85638 | -0.810144 | 1.33E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene85638 | -0.824853 | 6.44E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85638.t1 | MTR_3g108320 | 99.359 | 624 | 4 | 0 | 1 | 624 | 1 | 624 | 0.0 | 1285 |
| MS.gene85638.t1 | MTR_3g108320 | 99.815 | 542 | 1 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1124 |
| MS.gene85638.t1 | MTR_3g108320 | 100.000 | 541 | 0 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1122 |
| MS.gene85638.t1 | MTR_4g113530 | 50.203 | 492 | 237 | 4 | 20 | 509 | 23 | 508 | 1.34e-165 | 496 |
| MS.gene85638.t1 | MTR_2g019530 | 46.958 | 526 | 273 | 5 | 21 | 545 | 29 | 549 | 7.23e-157 | 470 |
| MS.gene85638.t1 | MTR_8g446430 | 43.850 | 561 | 300 | 6 | 23 | 573 | 20 | 575 | 1.97e-151 | 453 |
| MS.gene85638.t1 | MTR_2g006870 | 45.437 | 504 | 266 | 5 | 17 | 519 | 39 | 534 | 1.79e-145 | 442 |
| MS.gene85638.t1 | MTR_3g107720 | 45.511 | 479 | 246 | 5 | 40 | 515 | 60 | 526 | 2.04e-137 | 423 |
| MS.gene85638.t1 | MTR_1g011755 | 46.421 | 461 | 228 | 6 | 39 | 497 | 46 | 489 | 4.91e-136 | 418 |
| MS.gene85638.t1 | MTR_5g077770 | 36.152 | 473 | 283 | 9 | 40 | 502 | 78 | 541 | 7.60e-91 | 299 |
| MS.gene85638.t1 | MTR_8g046440 | 50.179 | 279 | 137 | 1 | 217 | 495 | 9 | 285 | 1.75e-88 | 278 |
| MS.gene85638.t1 | MTR_1g040590 | 28.671 | 286 | 187 | 3 | 179 | 461 | 11 | 282 | 4.63e-41 | 150 |
| MS.gene85638.t1 | MTR_4g113370 | 29.524 | 210 | 146 | 1 | 269 | 476 | 5 | 214 | 5.52e-29 | 115 |
| MS.gene85638.t1 | MTR_0279s0030 | 28.689 | 244 | 159 | 5 | 52 | 295 | 11 | 239 | 2.00e-21 | 97.1 |
| MS.gene85638.t1 | MTR_4g113390 | 31.156 | 199 | 126 | 5 | 41 | 234 | 16 | 208 | 5.63e-17 | 80.9 |
| MS.gene85638.t1 | MTR_4g130820 | 21.996 | 491 | 292 | 15 | 39 | 442 | 91 | 577 | 3.43e-16 | 82.8 |
| MS.gene85638.t1 | MTR_8g027755 | 23.383 | 201 | 151 | 2 | 245 | 442 | 364 | 564 | 7.35e-14 | 75.5 |
| MS.gene85638.t1 | MTR_1g028370 | 21.145 | 454 | 280 | 14 | 92 | 472 | 143 | 591 | 1.02e-13 | 74.7 |
| MS.gene85638.t1 | MTR_1g064240 | 22.831 | 219 | 165 | 3 | 241 | 455 | 341 | 559 | 3.06e-13 | 73.2 |
| MS.gene85638.t1 | MTR_4g058730 | 22.120 | 217 | 165 | 3 | 243 | 455 | 331 | 547 | 4.13e-12 | 69.7 |
| MS.gene85638.t1 | MTR_7g117310 | 26.238 | 202 | 144 | 3 | 245 | 442 | 306 | 506 | 6.25e-12 | 68.9 |
| MS.gene85638.t1 | MTR_7g117310 | 26.238 | 202 | 144 | 3 | 245 | 442 | 360 | 560 | 6.52e-12 | 68.9 |
| MS.gene85638.t1 | MTR_7g117310 | 25.980 | 204 | 146 | 3 | 243 | 442 | 370 | 572 | 8.10e-12 | 68.9 |
| MS.gene85638.t1 | MTR_3g091080 | 22.059 | 204 | 154 | 3 | 243 | 442 | 353 | 555 | 1.14e-11 | 68.2 |
| MS.gene85638.t1 | MTR_3g088875 | 22.167 | 203 | 155 | 2 | 243 | 442 | 315 | 517 | 1.18e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85638.t1 | AT4G32650 | 58.983 | 629 | 236 | 7 | 8 | 623 | 42 | 661 | 0.0 | 708 |
| MS.gene85638.t1 | AT4G32650 | 59.171 | 627 | 237 | 8 | 8 | 623 | 42 | 660 | 0.0 | 706 |
| MS.gene85638.t1 | AT4G32650 | 60.036 | 548 | 207 | 4 | 8 | 545 | 42 | 587 | 0.0 | 641 |
| MS.gene85638.t1 | AT5G46240 | 42.209 | 661 | 319 | 10 | 15 | 622 | 23 | 673 | 2.36e-166 | 491 |
| MS.gene85638.t1 | AT2G26650 | 48.665 | 487 | 239 | 4 | 20 | 504 | 26 | 503 | 9.44e-162 | 485 |
| MS.gene85638.t1 | AT4G18290 | 49.068 | 483 | 242 | 3 | 21 | 503 | 29 | 507 | 2.15e-150 | 451 |
| MS.gene85638.t1 | AT4G18290 | 49.068 | 483 | 242 | 3 | 21 | 503 | 40 | 518 | 3.31e-150 | 451 |
| MS.gene85638.t1 | AT4G32500 | 45.674 | 497 | 260 | 4 | 20 | 511 | 43 | 534 | 8.26e-147 | 447 |
| MS.gene85638.t1 | AT2G25600 | 45.766 | 496 | 259 | 5 | 20 | 511 | 47 | 536 | 3.29e-145 | 443 |
| MS.gene85638.t1 | AT4G22200 | 41.607 | 560 | 304 | 7 | 17 | 574 | 39 | 577 | 3.88e-136 | 410 |
| MS.gene85638.t1 | AT4G22200 | 40.609 | 591 | 324 | 8 | 17 | 605 | 39 | 604 | 2.28e-134 | 412 |
| MS.gene85638.t1 | AT2G26650 | 49.015 | 406 | 197 | 3 | 101 | 504 | 1 | 398 | 1.08e-131 | 404 |
| MS.gene85638.t1 | AT3G02850 | 35.667 | 457 | 277 | 7 | 44 | 491 | 74 | 522 | 5.66e-93 | 298 |
| MS.gene85638.t1 | AT3G02850 | 35.667 | 457 | 277 | 7 | 44 | 491 | 74 | 522 | 1.67e-91 | 299 |
| MS.gene85638.t1 | AT3G02850 | 36.026 | 458 | 274 | 9 | 44 | 491 | 74 | 522 | 4.19e-91 | 300 |
| MS.gene85638.t1 | AT5G37500 | 35.730 | 459 | 278 | 7 | 42 | 491 | 55 | 505 | 7.31e-89 | 291 |
| MS.gene85638.t1 | AT5G37500 | 35.730 | 459 | 278 | 7 | 42 | 491 | 55 | 505 | 4.82e-88 | 291 |
| MS.gene85638.t1 | AT5G37500 | 35.730 | 459 | 278 | 7 | 42 | 491 | 55 | 505 | 5.48e-88 | 291 |
| MS.gene85638.t1 | AT5G37500 | 35.477 | 451 | 274 | 7 | 50 | 491 | 9 | 451 | 5.38e-85 | 282 |
| MS.gene85638.t1 | AT1G19780 | 24.390 | 205 | 152 | 2 | 241 | 442 | 164 | 368 | 2.17e-15 | 79.7 |
| MS.gene85638.t1 | AT1G19780 | 24.390 | 205 | 152 | 2 | 241 | 442 | 375 | 579 | 3.89e-15 | 79.7 |
| MS.gene85638.t1 | AT1G15990 | 23.902 | 205 | 153 | 2 | 241 | 442 | 369 | 573 | 8.08e-15 | 78.6 |
| MS.gene85638.t1 | AT5G57940 | 23.645 | 203 | 152 | 2 | 243 | 442 | 367 | 569 | 8.80e-14 | 75.1 |
| MS.gene85638.t1 | AT5G57940 | 23.645 | 203 | 152 | 2 | 243 | 442 | 367 | 569 | 8.80e-14 | 75.1 |
| MS.gene85638.t1 | AT5G57940 | 23.645 | 203 | 152 | 2 | 243 | 442 | 360 | 562 | 9.36e-14 | 75.1 |
| MS.gene85638.t1 | AT2G46430 | 23.333 | 210 | 158 | 2 | 237 | 443 | 340 | 549 | 3.39e-13 | 73.2 |
| MS.gene85638.t1 | AT2G46430 | 23.333 | 210 | 158 | 2 | 237 | 443 | 340 | 549 | 3.39e-13 | 73.2 |
| MS.gene85638.t1 | AT4G30560 | 22.967 | 209 | 158 | 2 | 237 | 442 | 350 | 558 | 1.33e-12 | 71.2 |
| MS.gene85638.t1 | AT4G30560 | 22.967 | 209 | 158 | 2 | 237 | 442 | 350 | 558 | 1.33e-12 | 71.2 |
| MS.gene85638.t1 | AT4G30560 | 22.967 | 209 | 158 | 2 | 237 | 442 | 350 | 558 | 1.33e-12 | 71.2 |
| MS.gene85638.t1 | AT4G30560 | 22.967 | 209 | 158 | 2 | 237 | 442 | 376 | 584 | 1.40e-12 | 71.2 |
| MS.gene85638.t1 | AT4G30560 | 22.967 | 209 | 158 | 2 | 237 | 442 | 376 | 584 | 1.40e-12 | 71.2 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 381 | 585 | 5.53e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 381 | 585 | 5.53e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 381 | 585 | 5.53e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 381 | 585 | 5.53e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 381 | 585 | 5.53e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 354 | 558 | 5.60e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 404 | 608 | 6.52e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 404 | 608 | 6.52e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 404 | 608 | 6.52e-12 | 69.3 |
| MS.gene85638.t1 | AT2G23980 | 22.439 | 205 | 156 | 2 | 241 | 442 | 404 | 608 | 6.52e-12 | 69.3 |
| MS.gene85638.t1 | AT5G53130 | 21.296 | 216 | 162 | 3 | 230 | 442 | 347 | 557 | 3.34e-11 | 67.0 |
| MS.gene85638.t1 | AT1G01340 | 23.267 | 202 | 150 | 3 | 245 | 442 | 339 | 539 | 7.26e-11 | 65.9 |
| MS.gene85638.t1 | AT1G01340 | 23.267 | 202 | 150 | 3 | 245 | 442 | 344 | 544 | 7.29e-11 | 65.9 |
Find 133 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGGCATATTTCTACATTT+TGG | 0.153780 | 3.3:-88387920 | MS.gene85638:CDS |
| CTTCCCAATCCACGTGTTTC+CGG | 0.184950 | 3.3:+88389746 | None:intergenic |
| GCCTTCCCATCTTCATTAAA+TGG | 0.195859 | 3.3:+88387015 | None:intergenic |
| ATAACTCATCGTCCTCTCTT+AGG | 0.208567 | 3.3:+88384424 | None:intergenic |
| CTTCTACTTCTCACTGTATA+AGG | 0.266754 | 3.3:+88387090 | None:intergenic |
| CCCAACGAAAACATTGAAAA+TGG | 0.273238 | 3.3:-88384843 | MS.gene85638:CDS |
| CTGTATGCAGAGAACAAGTT+TGG | 0.290869 | 3.3:-88384504 | MS.gene85638:intron |
| CAGTTTATGAAGGGCCTAAA+AGG | 0.301144 | 3.3:-88386686 | MS.gene85638:CDS |
| ATTTGGTCCTTCAAACCTTC+TGG | 0.317911 | 3.3:+88388259 | None:intergenic |
| GACATTCTTTGTGGCTTACT+TGG | 0.330293 | 3.3:-88391148 | MS.gene85638:CDS |
| TTCCCAATCCACGTGTTTCC+GGG | 0.336300 | 3.3:+88389747 | None:intergenic |
| GTACCTATATCTGCGATCAT+AGG | 0.339717 | 3.3:+88391400 | None:intergenic |
| TTAAGGTTACCTTCTTCATA+TGG | 0.341526 | 3.3:+88385724 | None:intergenic |
| CACGACAGAGGGGAAGTCTT+TGG | 0.343113 | 3.3:-88390202 | MS.gene85638:CDS |
| GGAAGCATGGTAGGAGAAAT+AGG | 0.351752 | 3.3:-88387135 | MS.gene85638:CDS |
| AACAGAATTTCTGAGTGATT+TGG | 0.351877 | 3.3:-88386636 | MS.gene85638:CDS |
| ATTTCTCCTACCATGCTTCC+AGG | 0.352995 | 3.3:+88387138 | None:intergenic |
| GGGCCTAAAAGGCGGGGTGC+TGG | 0.361204 | 3.3:-88386675 | MS.gene85638:CDS |
| CATAATCCTGACATTCTTTG+TGG | 0.363443 | 3.3:-88391157 | MS.gene85638:CDS |
| ACCTGATAGCAATCTTCTTA+TGG | 0.365107 | 3.3:+88391097 | None:intergenic |
| AAAAGATCTTCGACTGAATC+TGG | 0.370035 | 3.3:+88384795 | None:intergenic |
| GCTTTCAGAGAGATGTCAAT+TGG | 0.377539 | 3.3:-88391228 | MS.gene85638:CDS |
| GACGTTCAAGTGGCGAAATA+AGG | 0.388506 | 3.3:-88391514 | MS.gene85638:CDS |
| ATACCGGCTCTAATTGCTTT+AGG | 0.395979 | 3.3:+88388169 | None:intergenic |
| GTGAAACCATTTAATGAAGA+TGG | 0.396083 | 3.3:-88387021 | MS.gene85638:CDS |
| AAGAGGAAGCAAAATTCTTA+TGG | 0.402959 | 3.3:-88384478 | MS.gene85638:CDS |
| CTTCTCACTGTATAAGGTTG+TGG | 0.405620 | 3.3:+88387096 | None:intergenic |
| TTTGGTCCTTCAAACCTTCT+GGG | 0.406751 | 3.3:+88388260 | None:intergenic |
| GGCCTCACTGCATATATTAT+CGG | 0.406985 | 3.3:-88389567 | MS.gene85638:CDS |
| TTTAAAGAATGGGTCTGAAC+AGG | 0.414172 | 3.3:-88387782 | MS.gene85638:intron |
| AGTTGGTATATCTGCTGAAA+TGG | 0.417497 | 3.3:+88390241 | None:intergenic |
| CACCCGGAAACACGTGGATT+GGG | 0.429696 | 3.3:-88389749 | MS.gene85638:CDS |
| AGGTCGAAGTAACCTTCATC+AGG | 0.430867 | 3.3:+88391443 | None:intergenic |
| TCACCCGGAAACACGTGGAT+TGG | 0.431953 | 3.3:-88389750 | MS.gene85638:CDS |
| TAACTCATCGTCCTCTCTTA+GGG | 0.435806 | 3.3:+88384425 | None:intergenic |
| AAACACGTGGATTGGGAAGC+AGG | 0.440143 | 3.3:-88389742 | MS.gene85638:CDS |
| CTCCCTATGATCGCAGATAT+AGG | 0.444080 | 3.3:-88391403 | MS.gene85638:intron |
| GCTGTGTATGTGCCAACATT+TGG | 0.448804 | 3.3:+88388242 | None:intergenic |
| TTATTCTACTCAGTTTATGA+AGG | 0.454225 | 3.3:-88386696 | MS.gene85638:intron |
| TATCGGAAACATGACAAATC+TGG | 0.454837 | 3.3:-88389550 | MS.gene85638:CDS |
| GATGATCGATTCGTATAAGC+TGG | 0.455732 | 3.3:+88387061 | None:intergenic |
| ACCATAAGAAGATTGCTATC+AGG | 0.463306 | 3.3:-88391098 | MS.gene85638:intron |
| CTCCATAGCCAACAGTGGTA+AGG | 0.464281 | 3.3:+88389652 | None:intergenic |
| GAAAAGATGCTGAGCAATAC+CGG | 0.467875 | 3.3:+88388153 | None:intergenic |
| TTATGAAGGGCCTAAAAGGC+GGG | 0.476754 | 3.3:-88386682 | MS.gene85638:CDS |
| TTCTGAACATGCTTAGACTC+TGG | 0.476763 | 3.3:-88390177 | MS.gene85638:CDS |
| TACCTATATCTGCGATCATA+GGG | 0.482588 | 3.3:+88391401 | None:intergenic |
| TTCTCACTGTATAAGGTTGT+GGG | 0.485398 | 3.3:+88387097 | None:intergenic |
| TTTGGCACTAATCCTGATGA+AGG | 0.487192 | 3.3:-88391455 | MS.gene85638:CDS |
| CTATTTGCAGTGCATTTCAC+AGG | 0.490090 | 3.3:-88389807 | MS.gene85638:CDS |
| CTTTCAGAGAGATGTCAATT+GGG | 0.493184 | 3.3:-88391227 | MS.gene85638:CDS |
| TCATCATCATTTCAAGCAGC+TGG | 0.493382 | 3.3:-88387043 | MS.gene85638:CDS |
| ATTGTAACCCTTACCACTGT+TGG | 0.494420 | 3.3:-88389660 | MS.gene85638:CDS |
| ACCAAAATGTAGAAATATGC+CGG | 0.496163 | 3.3:+88387919 | None:intergenic |
| TGCTTAGACTCTGGCGATTG+AGG | 0.497213 | 3.3:-88390168 | MS.gene85638:CDS |
| CGGCTCTAATTGCTTTAGGC+AGG | 0.497294 | 3.3:+88388173 | None:intergenic |
| ACCCTTACCACTGTTGGCTA+TGG | 0.497731 | 3.3:-88389654 | MS.gene85638:CDS |
| AGTAAGCCACAAAGAATGTC+AGG | 0.501626 | 3.3:+88391151 | None:intergenic |
| AGCAAAATTCTTATGGCTGA+TGG | 0.505553 | 3.3:-88384471 | MS.gene85638:CDS |
| GATTATGTCAAATGCAAAGA+AGG | 0.505830 | 3.3:+88391173 | None:intergenic |
| CAAACATTTATTCTTCCCCA+TGG | 0.507553 | 3.3:-88390281 | MS.gene85638:CDS |
| AAGCATAGGAGTGTCGGATC+GGG | 0.514286 | 3.3:-88389708 | MS.gene85638:CDS |
| ACAGGCTAGAGAAAGACATC+AGG | 0.515409 | 3.3:-88389985 | MS.gene85638:intron |
| ACAGCAAGAAGAAGTGCTAC+AGG | 0.515890 | 3.3:-88388197 | MS.gene85638:CDS |
| TGGACTCCCAGAAGGTTTGA+AGG | 0.517610 | 3.3:-88388266 | MS.gene85638:CDS |
| AAATTTATTTAAAGGAGTCT+CGG | 0.522060 | 3.3:-88388110 | MS.gene85638:CDS |
| TAAAAGACTGCTAGAAATTG+AGG | 0.525967 | 3.3:+88391484 | None:intergenic |
| CTAGATCCTGGAAGCATGGT+AGG | 0.533447 | 3.3:-88387144 | MS.gene85638:CDS |
| GAAGAAAATCCATATGAAGA+AGG | 0.533805 | 3.3:-88385733 | MS.gene85638:intron |
| GCAAACGTTCCTAGTGGTAT+TGG | 0.536240 | 3.3:-88391286 | MS.gene85638:CDS |
| TGAAACCATTTAATGAAGAT+GGG | 0.540227 | 3.3:-88387020 | MS.gene85638:CDS |
| CAGATATACCAACTTATAGC+AGG | 0.540823 | 3.3:-88390232 | MS.gene85638:CDS |
| CATCTTGCAAAATGAGATGC+CGG | 0.542003 | 3.3:-88387938 | MS.gene85638:CDS |
| AAGATGATGTCAACCTTTGA+CGG | 0.542979 | 3.3:+88387955 | None:intergenic |
| GTGGATTGGGAAGCAGGTAG+AGG | 0.543328 | 3.3:-88389736 | MS.gene85638:CDS |
| ACCATTTAATGAAGATGGGA+AGG | 0.544586 | 3.3:-88387016 | MS.gene85638:CDS |
| TCCATAGCCAACAGTGGTAA+GGG | 0.545277 | 3.3:+88389653 | None:intergenic |
| AACGTTCCTAGTGGTATTGG+TGG | 0.546659 | 3.3:-88391283 | MS.gene85638:CDS |
| GACTAGGCTTGACAGTGGAC+TGG | 0.551907 | 3.3:+88384896 | None:intergenic |
| TATTCTACTCAGTTTATGAA+GGG | 0.552678 | 3.3:-88386695 | MS.gene85638:intron |
| CTCAGAAATTCTGTTACATA+CGG | 0.553507 | 3.3:+88386644 | None:intergenic |
| TGTTTCCGGGTGATTTGTGA+TGG | 0.553957 | 3.3:+88389760 | None:intergenic |
| CAGGCAAATCACACGACAGA+GGG | 0.557635 | 3.3:-88390213 | MS.gene85638:CDS |
| TAAGCATAGGAGTGTCGGAT+CGG | 0.559099 | 3.3:-88389709 | MS.gene85638:CDS |
| TCAGGATTAGTGCCAAATGC+TGG | 0.561152 | 3.3:+88391461 | None:intergenic |
| AGAGTGGAAGCTAGATCCAT+GGG | 0.562419 | 3.3:+88390265 | None:intergenic |
| TCTGGTAGGATAATGAGCTT+TGG | 0.563514 | 3.3:+88384813 | None:intergenic |
| GCAGCATCCGACACAAAATG+AGG | 0.564454 | 3.3:-88385785 | MS.gene85638:intron |
| TCTCTGAAAGCTAACTCGAA+TGG | 0.564788 | 3.3:+88391240 | None:intergenic |
| TATTGGTGGTGTACTCAGCA+TGG | 0.565665 | 3.3:-88391269 | MS.gene85638:CDS |
| AAGTGGCGAAATAAGGAACT+TGG | 0.565700 | 3.3:-88391507 | MS.gene85638:CDS |
| ACCACGAACCTGAGTAAAGT+TGG | 0.575334 | 3.3:+88386984 | None:intergenic |
| GTTACACTTACTCCATGTAC+TGG | 0.577805 | 3.3:-88389686 | MS.gene85638:CDS |
| AATTATCACCAACTTTACTC+AGG | 0.579672 | 3.3:-88386992 | MS.gene85638:intron |
| GAACGTCTTCTAACTAGAGA+TGG | 0.581226 | 3.3:+88391530 | None:intergenic |
| CAGAGTGGAAGCTAGATCCA+TGG | 0.582011 | 3.3:+88390264 | None:intergenic |
| AGATGATGTCAACCTTTGAC+GGG | 0.585146 | 3.3:+88387956 | None:intergenic |
| TCTTCTTATGGTCATCAACA+AGG | 0.589359 | 3.3:+88391109 | None:intergenic |
| CAAACTAGATCCTGGAAGCA+TGG | 0.592017 | 3.3:-88387148 | MS.gene85638:CDS |
| ATTGGTGGTGTACTCAGCAT+GGG | 0.592623 | 3.3:-88391268 | MS.gene85638:CDS |
| AGATCTATGCGCCCTAAGAG+AGG | 0.595067 | 3.3:-88384436 | MS.gene85638:CDS |
| CTGCCTAAAGCAATTAGAGC+CGG | 0.596573 | 3.3:-88388172 | MS.gene85638:CDS |
| GATCTTCGACTGAATCTGGT+AGG | 0.597089 | 3.3:+88384799 | None:intergenic |
| ATGATCGATTCGTATAAGCT+GGG | 0.597906 | 3.3:+88387062 | None:intergenic |
| GCTTTCCATCACAAATCACC+CGG | 0.601397 | 3.3:-88389765 | MS.gene85638:CDS |
| CTCTGTCAGAACCTTTGCCA+TGG | 0.604556 | 3.3:-88389517 | MS.gene85638:intron |
| TTTCGTTGGGGTGATGTCCG+TGG | 0.604677 | 3.3:+88384856 | None:intergenic |
| TTTATGAAGGGCCTAAAAGG+CGG | 0.604730 | 3.3:-88386683 | MS.gene85638:CDS |
| TGCAGAAAATACAACGGAGA+AGG | 0.604909 | 3.3:-88389622 | MS.gene85638:CDS |
| AGCAGAATACTACCCGTCAA+AGG | 0.606939 | 3.3:-88387968 | MS.gene85638:CDS |
| AGGTTTGAAGGACCAAATGT+TGG | 0.607435 | 3.3:-88388254 | MS.gene85638:CDS |
| GTGATTTGCCTGCTATAAGT+TGG | 0.611642 | 3.3:+88390224 | None:intergenic |
| AACAAGATCAGCAATCAACA+TGG | 0.622158 | 3.3:+88391203 | None:intergenic |
| CTAGTTAGAAGACGTTCAAG+TGG | 0.624136 | 3.3:-88391524 | MS.gene85638:CDS |
| GGTTACAATAGACCAGTACA+TGG | 0.630208 | 3.3:+88389674 | None:intergenic |
| CGGAAACATGACAAATCTGG+TGG | 0.634913 | 3.3:-88389547 | MS.gene85638:CDS |
| GTGTTAGTGAGCTCTTCTCA+AGG | 0.639360 | 3.3:-88390144 | MS.gene85638:intron |
| TCTGAGTGATTTGGAAGACG+AGG | 0.639686 | 3.3:-88386627 | MS.gene85638:intron |
| CAGCATCCGACACAAAATGA+GGG | 0.640928 | 3.3:-88385784 | MS.gene85638:CDS |
| CCGATTAGAGTCAAAATCCA+CGG | 0.641853 | 3.3:-88384873 | MS.gene85638:CDS |
| TATGAAGGGCCTAAAAGGCG+GGG | 0.644259 | 3.3:-88386681 | MS.gene85638:CDS |
| ACAAATCACCCGGAAACACG+TGG | 0.645837 | 3.3:-88389755 | MS.gene85638:CDS |
| AGTACACCACCAATACCACT+AGG | 0.675337 | 3.3:+88391277 | None:intergenic |
| CAGGCTAGAGAAAGACATCA+GGG | 0.679388 | 3.3:-88389984 | MS.gene85638:CDS |
| GCAGGCAAATCACACGACAG+AGG | 0.680984 | 3.3:-88390214 | MS.gene85638:CDS |
| TAAATCTCCATAGCCAACAG+TGG | 0.683311 | 3.3:+88389647 | None:intergenic |
| TTTACATGCAGAAAATACAA+CGG | 0.691098 | 3.3:-88389628 | MS.gene85638:CDS |
| TATCTGCTGAAATGGCAGAG+TGG | 0.713852 | 3.3:+88390249 | None:intergenic |
| ATTGTGGCAAACGTTCCTAG+TGG | 0.719275 | 3.3:-88391292 | MS.gene85638:CDS |
| ATCGGGACTAGGCTTGACAG+TGG | 0.726298 | 3.3:+88384891 | None:intergenic |
| AGGCAAATCACACGACAGAG+GGG | 0.735317 | 3.3:-88390212 | MS.gene85638:CDS |
| TTCCGATAATATATGCAGTG+AGG | 0.738037 | 3.3:+88389565 | None:intergenic |
| GAGTGGAAGCTAGATCCATG+GGG | 0.775567 | 3.3:+88390266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88384413 | 88391561 | 88384413 | ID=MS.gene85638 |
| chr3.3 | mRNA | 88384413 | 88391561 | 88384413 | ID=MS.gene85638.t1;Parent=MS.gene85638 |
| chr3.3 | exon | 88391404 | 88391561 | 88391404 | ID=MS.gene85638.t1.exon1;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88391404 | 88391561 | 88391404 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88391099 | 88391314 | 88391099 | ID=MS.gene85638.t1.exon2;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88391099 | 88391314 | 88391099 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88390145 | 88390309 | 88390145 | ID=MS.gene85638.t1.exon3;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88390145 | 88390309 | 88390145 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88389946 | 88390003 | 88389946 | ID=MS.gene85638.t1.exon4;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88389946 | 88390003 | 88389946 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88389518 | 88389835 | 88389518 | ID=MS.gene85638.t1.exon5;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88389518 | 88389835 | 88389518 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88388090 | 88388329 | 88388090 | ID=MS.gene85638.t1.exon6;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88388090 | 88388329 | 88388090 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88387906 | 88388004 | 88387906 | ID=MS.gene85638.t1.exon7;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88387906 | 88388004 | 88387906 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88387783 | 88387815 | 88387783 | ID=MS.gene85638.t1.exon8;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88387783 | 88387815 | 88387783 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88386993 | 88387178 | 88386993 | ID=MS.gene85638.t1.exon9;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88386993 | 88387178 | 88386993 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88386628 | 88386705 | 88386628 | ID=MS.gene85638.t1.exon10;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88386628 | 88386705 | 88386628 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88385734 | 88385803 | 88385734 | ID=MS.gene85638.t1.exon11;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88385734 | 88385803 | 88385734 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88384784 | 88384933 | 88384784 | ID=MS.gene85638.t1.exon12;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88384784 | 88384933 | 88384784 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| chr3.3 | exon | 88384413 | 88384516 | 88384413 | ID=MS.gene85638.t1.exon13;Parent=MS.gene85638.t1 |
| chr3.3 | CDS | 88384413 | 88384516 | 88384413 | ID=cds.MS.gene85638.t1;Parent=MS.gene85638.t1 |
| Gene Sequence |
| Protein sequence |
