Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038198.01.T01 | YP_001381733.1 | 100 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 3.69E-32 | 115 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038198.01.T01 | Q32902 | 98.387 | 62 | 1 | 0 | 1 | 62 | 1 | 62 | 3.14E-34 | 113 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038198.01.T01 | A0A0K0LU79 | 100.000 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 1.76e-32 | 115 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047967.01 | MsG0780038198.01 | 0.833276 | 5.853674e-56 | 6.708511e-53 |
MsG0080048059.01 | MsG0780038198.01 | 0.832212 | 1.075092e-55 | 1.193572e-52 |
MsG0080048560.01 | MsG0780038198.01 | 0.816735 | 4.745299e-52 | 3.389782e-49 |
MsG0080048690.01 | MsG0780038198.01 | 0.804297 | 2.311758e-49 | 1.187629e-46 |
MsG0080048692.01 | MsG0780038198.01 | 0.828652 | 7.979401e-55 | 7.981027e-52 |
MsG0080048693.01 | MsG0780038198.01 | 0.853465 | 2.347738e-61 | 5.077518e-58 |
MsG0080048694.01 | MsG0780038198.01 | 0.858168 | 9.910544e-63 | 2.506626e-59 |
MsG0080048695.01 | MsG0780038198.01 | 0.857970 | 1.135529e-62 | 2.853154e-59 |
MsG0080048697.01 | MsG0780038198.01 | 0.868384 | 6.796801e-66 | 2.453800e-62 |
MsG0080048813.01 | MsG0780038198.01 | 0.808677 | 2.753745e-50 | 1.584316e-47 |
MsG0080049015.01 | MsG0780038198.01 | 0.804054 | 2.596863e-49 | 1.325874e-46 |
MsG0080049038.01 | MsG0780038198.01 | 0.801458 | 8.918139e-49 | 4.261145e-46 |
MsG0080049076.01 | MsG0780038198.01 | 0.884698 | 1.534893e-71 | 1.022982e-67 |
MsG0080049077.01 | MsG0780038198.01 | 0.872181 | 3.872248e-67 | 1.604816e-63 |
MsG0180000306.01 | MsG0780038198.01 | 0.801745 | 7.790310e-49 | 3.749173e-46 |
MsG0180000417.01 | MsG0780038198.01 | 0.815254 | 1.015954e-51 | 6.968751e-49 |
MsG0180000467.01 | MsG0780038198.01 | 0.800772 | 1.232228e-48 | 5.786169e-46 |
MsG0180001072.01 | MsG0780038198.01 | 0.822965 | 1.786119e-53 | 1.517535e-50 |
MsG0180001507.01 | MsG0780038198.01 | 0.814664 | 1.373099e-51 | 9.269514e-49 |
MsG0180001919.01 | MsG0780038198.01 | 0.897321 | 1.575239e-76 | 1.770214e-72 |
MsG0180001925.01 | MsG0780038198.01 | 0.838407 | 2.928511e-57 | 3.918728e-54 |
MsG0180002099.01 | MsG0780038198.01 | 0.815057 | 1.123586e-51 | 7.665901e-49 |
MsG0180002214.01 | MsG0780038198.01 | 0.825491 | 4.554762e-54 | 4.157712e-51 |
MsG0180002439.01 | MsG0780038198.01 | 0.827855 | 1.241985e-54 | 1.213732e-51 |
MsG0180002546.01 | MsG0780038198.01 | 0.809877 | 1.522704e-50 | 9.044810e-48 |
MsG0180003757.01 | MsG0780038198.01 | 0.828628 | 8.090178e-55 | 8.085926e-52 |
MsG0180003779.01 | MsG0780038198.01 | 0.805602 | 1.233248e-49 | 6.551941e-47 |
MsG0180003985.01 | MsG0780038198.01 | 0.814125 | 1.806090e-51 | 1.201628e-48 |
MsG0180004124.01 | MsG0780038198.01 | 0.807338 | 5.308052e-50 | 2.948849e-47 |
MsG0180004125.01 | MsG0780038198.01 | 0.806652 | 7.412921e-50 | 4.045328e-47 |
MsG0180004322.01 | MsG0780038198.01 | 0.811973 | 5.354642e-51 | 3.362022e-48 |
MsG0180004553.01 | MsG0780038198.01 | 0.831835 | 1.332880e-55 | 1.463672e-52 |
MsG0180004586.01 | MsG0780038198.01 | 0.829123 | 6.139228e-55 | 6.225449e-52 |
MsG0180005791.01 | MsG0780038198.01 | 0.822299 | 2.551582e-53 | 2.127304e-50 |
MsG0180006212.01 | MsG0780038198.01 | 0.826275 | 2.966300e-54 | 2.769032e-51 |
MsG0180006227.01 | MsG0780038198.01 | 0.813247 | 2.818578e-51 | 1.830998e-48 |
MsG0280006336.01 | MsG0780038198.01 | 0.801274 | 9.726831e-49 | 4.626114e-46 |
MsG0280006452.01 | MsG0780038198.01 | 0.816409 | 5.613882e-52 | 3.974622e-49 |
MsG0280010780.01 | MsG0780038198.01 | 0.842783 | 2.094357e-58 | 3.209586e-55 |
MsG0280011301.01 | MsG0780038198.01 | 0.828824 | 7.252654e-55 | 7.289880e-52 |
MsG0280011475.01 | MsG0780038198.01 | 0.810170 | 1.316705e-50 | 7.881221e-48 |
MsG0380012065.01 | MsG0780038198.01 | 0.815425 | 9.306733e-52 | 6.414252e-49 |
MsG0380012281.01 | MsG0780038198.01 | 0.818893 | 1.545517e-52 | 1.171583e-49 |
MsG0380013114.01 | MsG0780038198.01 | 0.809606 | 1.741046e-50 | 1.026867e-47 |
MsG0380013448.01 | MsG0780038198.01 | 0.838784 | 2.340914e-57 | 3.168634e-54 |
MsG0380013473.01 | MsG0780038198.01 | 0.823656 | 1.231832e-53 | 1.067296e-50 |
MsG0380013506.01 | MsG0780038198.01 | 0.802722 | 4.902783e-49 | 2.419157e-46 |
MsG0380013888.01 | MsG0780038198.01 | 0.809524 | 1.813824e-50 | 1.067372e-47 |
MsG0380013891.01 | MsG0780038198.01 | 0.807603 | 4.662322e-50 | 2.607901e-47 |
MsG0380013892.01 | MsG0780038198.01 | 0.810119 | 1.350663e-50 | 8.073909e-48 |
MsG0380013919.01 | MsG0780038198.01 | 0.838034 | 3.654492e-57 | 4.835213e-54 |
MsG0380013921.01 | MsG0780038198.01 | 0.893226 | 7.652287e-75 | 7.229443e-71 |
MsG0380013925.01 | MsG0780038198.01 | 0.800148 | 1.651017e-48 | 7.631083e-46 |
MsG0380013926.01 | MsG0780038198.01 | 0.813785 | 2.147076e-51 | 1.415358e-48 |
MsG0380013928.01 | MsG0780038198.01 | 0.868251 | 7.500500e-66 | 2.695099e-62 |
MsG0380013929.01 | MsG0780038198.01 | 0.820704 | 5.960212e-53 | 4.750746e-50 |
MsG0380013931.01 | MsG0780038198.01 | 0.819059 | 1.416771e-52 | 1.078867e-49 |
MsG0380013935.01 | MsG0780038198.01 | 0.820644 | 6.152146e-53 | 4.895341e-50 |
MsG0380013938.01 | MsG0780038198.01 | 0.808256 | 3.386346e-50 | 1.927097e-47 |
MsG0380013940.01 | MsG0780038198.01 | 0.850141 | 2.056666e-60 | 3.989472e-57 |
MsG0380013941.01 | MsG0780038198.01 | 0.801872 | 7.335649e-49 | 3.542068e-46 |
MsG0380013942.01 | MsG0780038198.01 | 0.809222 | 2.105676e-50 | 1.229224e-47 |
MsG0380013943.01 | MsG0780038198.01 | 0.866461 | 2.802768e-65 | 9.453914e-62 |
MsG0380013945.01 | MsG0780038198.01 | 0.877104 | 8.209773e-69 | 4.078594e-65 |
MsG0380013953.01 | MsG0780038198.01 | 0.871289 | 7.656026e-67 | 3.071825e-63 |
MsG0380013954.01 | MsG0780038198.01 | 0.911184 | 8.098524e-83 | 1.714799e-78 |
MsG0380013956.01 | MsG0780038198.01 | 0.883839 | 3.193046e-71 | 2.057458e-67 |
MsG0380013957.01 | MsG0780038198.01 | 0.869070 | 4.077213e-66 | 1.509556e-62 |
MsG0380013966.01 | MsG0780038198.01 | 0.854385 | 1.274801e-61 | 2.841944e-58 |
MsG0380013967.01 | MsG0780038198.01 | 0.871443 | 6.809421e-67 | 2.747677e-63 |
MsG0380013971.01 | MsG0780038198.01 | 0.884343 | 2.080018e-71 | 1.367437e-67 |
MsG0380013975.01 | MsG0780038198.01 | 0.872654 | 2.694306e-67 | 1.136493e-63 |
MsG0380013977.01 | MsG0780038198.01 | 0.876008 | 1.964016e-68 | 9.369899e-65 |
MsG0380013985.01 | MsG0780038198.01 | 0.830467 | 2.888961e-55 | 3.046101e-52 |
MsG0380013986.01 | MsG0780038198.01 | 0.823493 | 1.344373e-53 | 1.159407e-50 |
MsG0380013997.01 | MsG0780038198.01 | 0.819439 | 1.160611e-52 | 8.931598e-50 |
MsG0380013999.01 | MsG0780038198.01 | 0.861984 | 6.985053e-64 | 2.013198e-60 |
MsG0380014004.01 | MsG0780038198.01 | 0.849710 | 2.715025e-60 | 5.192315e-57 |
MsG0380014005.01 | MsG0780038198.01 | 0.873041 | 1.999314e-67 | 8.552228e-64 |
MsG0380014006.01 | MsG0780038198.01 | 0.866945 | 1.967021e-65 | 6.749383e-62 |
MsG0380014016.01 | MsG0780038198.01 | 0.827371 | 1.623226e-54 | 1.564271e-51 |
MsG0380014017.01 | MsG0780038198.01 | 0.857238 | 1.870668e-62 | 4.586156e-59 |
MsG0380014020.01 | MsG0780038198.01 | 0.872093 | 4.144473e-67 | 1.711919e-63 |
MsG0380014021.01 | MsG0780038198.01 | 0.904261 | 1.476172e-79 | 2.265230e-75 |
MsG0380014023.01 | MsG0780038198.01 | 0.848393 | 6.306714e-60 | 1.155710e-56 |
MsG0380014024.01 | MsG0780038198.01 | 0.844977 | 5.410632e-59 | 8.885547e-56 |
MsG0380014026.01 | MsG0780038198.01 | 0.807107 | 5.939193e-50 | 3.279568e-47 |
MsG0380014029.01 | MsG0780038198.01 | 0.856046 | 4.192041e-62 | 9.875682e-59 |
MsG0380014032.01 | MsG0780038198.01 | 0.879477 | 1.206782e-69 | 6.552690e-66 |
MsG0380014033.01 | MsG0780038198.01 | 0.831814 | 1.348515e-55 | 1.479971e-52 |
MsG0380014050.01 | MsG0780038198.01 | 0.842139 | 3.103724e-58 | 4.661782e-55 |
MsG0680030756.01 | MsG0780038198.01 | 0.818584 | 1.815960e-52 | 1.364773e-49 |
MsG0680031813.01 | MsG0780038198.01 | 0.853204 | 2.789046e-61 | 5.979332e-58 |
MsG0680034229.01 | MsG0780038198.01 | 0.831212 | 1.896763e-55 | 2.044502e-52 |
MsG0480018626.01 | MsG0780038198.01 | 0.800015 | 1.757448e-48 | 8.095489e-46 |
MsG0480018628.01 | MsG0780038198.01 | 0.823637 | 1.244244e-53 | 1.077454e-50 |
MsG0480019028.01 | MsG0780038198.01 | 0.817689 | 2.894874e-52 | 2.122734e-49 |
MsG0480019861.01 | MsG0780038198.01 | 0.810096 | 1.366226e-50 | 8.161875e-48 |
MsG0480020051.01 | MsG0780038198.01 | 0.807254 | 5.528485e-50 | 3.064630e-47 |
MsG0480021205.01 | MsG0780038198.01 | 0.831765 | 1.386884e-55 | 1.519869e-52 |
MsG0480021327.01 | MsG0780038198.01 | 0.845620 | 3.625965e-59 | 6.077746e-56 |
MsG0480021331.01 | MsG0780038198.01 | 0.859713 | 3.418370e-63 | 9.113626e-60 |
MsG0480021912.01 | MsG0780038198.01 | 0.805015 | 1.637088e-49 | 8.567338e-47 |
MsG0480022295.01 | MsG0780038198.01 | 0.805265 | 1.451180e-49 | 7.643104e-47 |
MsG0480022459.01 | MsG0780038198.01 | 0.811527 | 6.694846e-51 | 4.154112e-48 |
MsG0480022591.01 | MsG0780038198.01 | 0.823836 | 1.117726e-53 | 9.733296e-51 |
MsG0480023187.01 | MsG0780038198.01 | 0.816613 | 5.053458e-52 | 3.597903e-49 |
MsG0480023217.01 | MsG0780038198.01 | 0.818534 | 1.864035e-52 | 1.399038e-49 |
MsG0580024309.01 | MsG0780038198.01 | 0.834601 | 2.726854e-56 | 3.251910e-53 |
MsG0580024493.01 | MsG0780038198.01 | 0.820932 | 5.281946e-53 | 4.237277e-50 |
MsG0380015200.01 | MsG0780038198.01 | 0.824228 | 9.042460e-54 | 7.961562e-51 |
MsG0380015201.01 | MsG0780038198.01 | 0.829097 | 6.229674e-55 | 6.312157e-52 |
MsG0380015271.01 | MsG0780038198.01 | 0.813423 | 2.578846e-51 | 1.683444e-48 |
MsG0380015348.01 | MsG0780038198.01 | 0.854867 | 9.245968e-62 | 2.094600e-58 |
MsG0380015439.01 | MsG0780038198.01 | 0.829701 | 4.443579e-55 | 4.583350e-52 |
MsG0380015619.01 | MsG0780038198.01 | 0.822726 | 2.029931e-53 | 1.713121e-50 |
MsG0380015719.01 | MsG0780038198.01 | 0.813049 | 3.115829e-51 | 2.013326e-48 |
MsG0380015752.01 | MsG0780038198.01 | 0.802583 | 5.237885e-49 | 2.575195e-46 |
MsG0380016241.01 | MsG0780038198.01 | 0.809264 | 2.061481e-50 | 1.204788e-47 |
MsG0380016424.01 | MsG0780038198.01 | 0.800496 | 1.402788e-48 | 6.541272e-46 |
MsG0380016790.01 | MsG0780038198.01 | 0.826783 | 2.244407e-54 | 2.125610e-51 |
MsG0380016835.01 | MsG0780038198.01 | 0.824621 | 7.307973e-54 | 6.508349e-51 |
MsG0380016931.01 | MsG0780038198.01 | 0.814312 | 1.642558e-51 | 1.098444e-48 |
MsG0380016934.01 | MsG0780038198.01 | 0.813235 | 2.835995e-51 | 1.841700e-48 |
MsG0380016935.01 | MsG0780038198.01 | 0.820047 | 8.429247e-53 | 6.598325e-50 |
MsG0380017405.01 | MsG0780038198.01 | 0.836960 | 6.888932e-57 | 8.819132e-54 |
MsG0380017406.01 | MsG0780038198.01 | 0.845949 | 2.951848e-59 | 5.001477e-56 |
MsG0380017895.01 | MsG0780038198.01 | 0.811552 | 6.614016e-51 | 4.106451e-48 |
MsG0380017962.01 | MsG0780038198.01 | 0.843183 | 1.638770e-58 | 2.543214e-55 |
MsG0380018072.01 | MsG0780038198.01 | 0.805868 | 1.084163e-49 | 5.799791e-47 |
MsG0480018296.01 | MsG0780038198.01 | 0.831886 | 1.294768e-55 | 1.424042e-52 |
MsG0580027095.01 | MsG0780038198.01 | 0.810659 | 1.032730e-50 | 6.262042e-48 |
MsG0580027677.01 | MsG0780038198.01 | 0.866344 | 3.054406e-65 | 1.026071e-61 |
MsG0580030197.01 | MsG0780038198.01 | 0.819376 | 1.199946e-52 | 9.217088e-50 |
MsG0680030439.01 | MsG0780038198.01 | 0.870510 | 1.381928e-66 | 5.389451e-63 |
MsG0280007233.01 | MsG0780038198.01 | 0.805853 | 1.092517e-49 | 5.842260e-47 |
MsG0280007247.01 | MsG0780038198.01 | 0.810230 | 1.278288e-50 | 7.662972e-48 |
MsG0280007649.01 | MsG0780038198.01 | 0.811718 | 6.086171e-51 | 3.795274e-48 |
MsG0280007650.01 | MsG0780038198.01 | 0.812043 | 5.170497e-51 | 3.252320e-48 |
MsG0280009094.01 | MsG0780038198.01 | 0.800991 | 1.111529e-48 | 5.249168e-46 |
MsG0280009541.01 | MsG0780038198.01 | 0.818930 | 1.515722e-52 | 1.150277e-49 |
MsG0280009742.01 | MsG0780038198.01 | 0.814897 | 1.219097e-51 | 8.281506e-49 |
MsG0280009776.01 | MsG0780038198.01 | 0.826666 | 2.393141e-54 | 2.259016e-51 |
MsG0280009864.01 | MsG0780038198.01 | 0.807204 | 5.665061e-50 | 3.136257e-47 |
MsG0280010142.01 | MsG0780038198.01 | 0.857536 | 1.527072e-62 | 3.781454e-59 |
MsG0280010143.01 | MsG0780038198.01 | 0.860529 | 1.938422e-63 | 5.315287e-60 |
MsG0280010144.01 | MsG0780038198.01 | 0.847496 | 1.114951e-59 | 1.985463e-56 |
MsG0280010145.01 | MsG0780038198.01 | 0.802989 | 4.316785e-49 | 2.144391e-46 |
MsG0780036064.01 | MsG0780038198.01 | 0.819237 | 1.290569e-52 | 9.875744e-50 |
MsG0780036068.01 | MsG0780038198.01 | 0.837165 | 6.105185e-57 | 7.864125e-54 |
MsG0780038047.01 | MsG0780038198.01 | 0.844870 | 5.783363e-59 | 9.464325e-56 |
MsG0780038197.01 | MsG0780038198.01 | 0.854581 | 1.119302e-61 | 2.511643e-58 |
MsG0780038198.01 | MsG0780039821.01 | 0.823989 | 1.028943e-53 | 8.998360e-51 |
MsG0780038198.01 | MsG0780039836.01 | 0.815617 | 8.435109e-52 | 5.844756e-49 |
MsG0780038198.01 | MsG0780039838.01 | 0.820093 | 8.226558e-53 | 6.448200e-50 |
MsG0780038198.01 | MsG0780039839.01 | 0.810666 | 1.029109e-50 | 6.241430e-48 |
MsG0780038198.01 | MsG0780039860.01 | 0.803789 | 2.948569e-49 | 1.495156e-46 |
MsG0780038198.01 | MsG0780040121.01 | 0.843885 | 1.064197e-58 | 1.688737e-55 |
MsG0780038198.01 | MsG0780040321.01 | 0.824859 | 6.423847e-54 | 5.759798e-51 |
MsG0780038198.01 | MsG0780041121.01 | 0.805015 | 1.636624e-49 | 8.565049e-47 |
MsG0780038198.01 | MsG0780041478.01 | 0.809889 | 1.513586e-50 | 8.993301e-48 |
MsG0780038198.01 | MsG0780041620.01 | 0.813487 | 2.496468e-51 | 1.632570e-48 |
MsG0780038198.01 | MsG0780041637.01 | 0.809297 | 2.029097e-50 | 1.186871e-47 |
MsG0780038198.01 | MsG0780041720.01 | 0.840118 | 1.054140e-57 | 1.486831e-54 |
MsG0780038198.01 | MsG0780041783.01 | 0.830639 | 2.621806e-55 | 2.778619e-52 |
MsG0780038198.01 | MsG0780041809.01 | 0.803327 | 3.676193e-49 | 1.842023e-46 |
MsG0780038198.01 | MsG0880041855.01 | 0.812611 | 3.886826e-51 | 2.482577e-48 |
MsG0780038198.01 | MsG0880042858.01 | 0.814176 | 1.760167e-51 | 1.172697e-48 |
MsG0780038198.01 | MsG0880042895.01 | 0.801834 | 7.467735e-49 | 3.602241e-46 |
MsG0780038198.01 | MsG0880043069.01 | 0.826478 | 2.654235e-54 | 2.491920e-51 |
MsG0780038198.01 | MsG0880043364.01 | -0.807147 | 5.824973e-50 | 3.219925e-47 |
MsG0780038198.01 | MsG0880044440.01 | 0.830845 | 2.335199e-55 | 2.489970e-52 |
MsG0780038198.01 | MsG0880044968.01 | 0.815197 | 1.045719e-51 | 7.161846e-49 |
MsG0780038198.01 | MsG0880045097.01 | 0.816564 | 5.182113e-52 | 3.684625e-49 |
MsG0780038198.01 | MsG0880045188.01 | 0.833728 | 4.514404e-56 | 5.243976e-53 |
MsG0780038198.01 | MsG0880045274.01 | 0.840759 | 7.166868e-58 | 1.031091e-54 |
MsG0780038198.01 | MsG0880045321.01 | 0.818150 | 2.277249e-52 | 1.691115e-49 |
MsG0780038198.01 | MsG0880045369.01 | 0.813118 | 3.009291e-51 | 1.947994e-48 |
MsG0780038198.01 | MsG0880045385.01 | 0.827247 | 1.737965e-54 | 1.668622e-51 |
MsG0780038198.01 | MsG0880045413.01 | 0.840743 | 7.233798e-58 | 1.040209e-54 |
MsG0780038198.01 | MsG0880045414.01 | 0.817627 | 2.989923e-52 | 2.188673e-49 |
MsG0780038198.01 | MsG0880045630.01 | 0.850942 | 1.225019e-60 | 2.439829e-57 |
MsG0780038198.01 | MsG0880045778.01 | 0.804139 | 2.492892e-49 | 1.275521e-46 |
MsG0780038198.01 | MsG0880046219.01 | 0.839971 | 1.151344e-57 | 1.616569e-54 |
MsG0780038198.01 | MsG0880046469.01 | 0.840632 | 7.737529e-58 | 1.108747e-54 |
MsG0780038198.01 | MsG0880047318.01 | 0.835943 | 1.249787e-56 | 1.551578e-53 |
MsG0780038198.01 | MsG0880047628.01 | 0.800379 | 1.481713e-48 | 6.889178e-46 |
MsG0780038198.01 | MsG0880047661.01 | 0.804007 | 2.655738e-49 | 1.354268e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038198.01.T01 | MTR_8g056780 | 100.000 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 4.46e-36 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038198.01.T01 | ATCG00300 | 96.774 | 62 | 2 | 0 | 1 | 62 | 1 | 62 | 5.01e-35 | 112 |
Find 9 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGTACACCAATCAATAAAA+TGG | 0.272913 | 7:-41948957 | MsG0780038197.01.T01:intron |
GTTGTATTTGCTTCTCCTGA+TGG | 0.417220 | 7:+41948980 | MsG0780038198.01.T01:CDS |
TATTTGCTTCTCCTGATGGT+TGG | 0.468755 | 7:+41948984 | MsG0780038198.01.T01:CDS |
TCCGGTACATCATTATGGAT+TGG | 0.474883 | 7:+41949031 | MsG0780038198.01.T01:CDS |
TTATTACTTGACCAACCATC+AGG | 0.487376 | 7:-41948995 | MsG0780038197.01.T01:intron |
TCCAATCCATAATGATGTAC+CGG | 0.492547 | 7:-41949032 | MsG0780038197.01.T01:intron |
TCAGGAGAAGCAAATACAAC+AGG | 0.517061 | 7:-41948977 | MsG0780038197.01.T01:intron |
ATTGGATTAGTATTTCTAGT+GGG | 0.580331 | 7:+41949049 | MsG0780038198.01.T01:CDS |
GATTGGATTAGTATTTCTAG+TGG | 0.595754 | 7:+41949048 | MsG0780038198.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAATGTTGTATTTTC+CGG | + | Chr7:41949013-41949032 | MsG0780038198.01.T01:CDS | 15.0% |
!! | ACTTCATCCATTTTATTGAT+TGG | + | Chr7:41948950-41948969 | MsG0780038198.01.T01:CDS | 25.0% |
!!! | ATTGGATTAGTATTTCTAGT+GGG | + | Chr7:41949049-41949068 | MsG0780038198.01.T01:CDS | 25.0% |
AGGTACACCAATCAATAAAA+TGG | - | Chr7:41948960-41948979 | MsG0780038197.01.T01:intron | 30.0% | |
! | TATTTTCCGGTACATCATTA+TGG | + | Chr7:41949026-41949045 | MsG0780038198.01.T01:CDS | 30.0% |
!! | GATTGGATTAGTATTTCTAG+TGG | + | Chr7:41949048-41949067 | MsG0780038198.01.T01:CDS | 30.0% |
TCCAATCCATAATGATGTAC+CGG | - | Chr7:41949035-41949054 | MsG0780038197.01.T01:intron | 35.0% | |
TTATTACTTGACCAACCATC+AGG | - | Chr7:41948998-41949017 | MsG0780038197.01.T01:intron | 35.0% | |
GTTGTATTTGCTTCTCCTGA+TGG | + | Chr7:41948980-41948999 | MsG0780038198.01.T01:CDS | 40.0% | |
TATTTGCTTCTCCTGATGGT+TGG | + | Chr7:41948984-41949003 | MsG0780038198.01.T01:CDS | 40.0% | |
TCAGGAGAAGCAAATACAAC+AGG | - | Chr7:41948980-41948999 | MsG0780038197.01.T01:intron | 40.0% | |
TCCGGTACATCATTATGGAT+TGG | + | Chr7:41949031-41949050 | MsG0780038198.01.T01:CDS | 40.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 41948908 | 41949096 | 41948908 | ID=MsG0780038198.01;Name=MsG0780038198.01 |
Chr7 | mRNA | 41948908 | 41949096 | 41948908 | ID=MsG0780038198.01.T01;Parent=MsG0780038198.01;Name=MsG0780038198.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|62 |
Chr7 | exon | 41948908 | 41949096 | 41948908 | ID=MsG0780038198.01.T01:exon:14204;Parent=MsG0780038198.01.T01 |
Chr7 | CDS | 41948908 | 41949096 | 41948908 | ID=MsG0780038198.01.T01:cds;Parent=MsG0780038198.01.T01 |
Gene Sequence |
Protein sequence |