AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298820 MtrunA17_Chr4g0058711 98.142 323 6 0 1 323 1 323 0.0 649
Msa1298820 MtrunA17_Chr3g0117171 70.440 318 89 3 1 317 1 314 7.69e-149 423
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298820 AT3G54170.1 62.500 288 98 4 9 295 6 284 3.02e-120 349

Find 107 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGCTTGGTCTTGGGCT+TGG 0.160943 8_3:-59660835 None:intergenic
CTGAACAAAGAAATGAAAAT+TGG 0.191751 8_3:-59660859 None:intergenic
AAGGTAATTAATCACCAATT+TGG 0.198806 8_3:-59663009 None:intergenic
TACGATAGTTATAATTCTTA+TGG 0.214687 8_3:-59669693 None:intergenic
CTCAGCTTCTCTCCGATTCT+AGG 0.243687 8_3:+59660991 Msa1298820:five_prime_UTR
TTCGGCTTGGTCTTGGGCTT+GGG 0.252798 8_3:-59660834 None:intergenic
TGAAGAGTTTACGCGGTTAA+AGG 0.276638 8_3:+59665909 Msa1298820:CDS
ATGCTTTCTAGTACCCAAAT+TGG 0.286019 8_3:+59662995 Msa1298820:intron
CAACAGCAGGAATTTGATTT+CGG 0.289698 8_3:+59661128 Msa1298820:intron
ATTGGGCTTCGGCTTGGTCT+TGG 0.290145 8_3:-59660841 None:intergenic
CGATTTACCGGAACACGTTC+AGG 0.304950 8_3:+59661155 Msa1298820:CDS
TTAACCGCGTAAACTCTTCA+TGG 0.307845 8_3:-59665906 None:intergenic
TTCTACTTCAGCTGTCGTTT+TGG 0.332049 8_3:-59661438 None:intergenic
GAATTACGTCGTCGAGAGTT+GGG 0.342049 8_3:-59661039 None:intergenic
GCTTGAAAAGGCAAAGAAAA+AGG 0.349170 8_3:+59663172 Msa1298820:intron
GCAACTTCCCCATCTTGCTT+TGG 0.351234 8_3:-59667384 None:intergenic
TTGGGCTTCGGCTTGGTCTT+GGG 0.356924 8_3:-59660840 None:intergenic
ATTTGATCTTTCCACATCAT+TGG 0.357734 8_3:-59668716 None:intergenic
CAACTTCCCCATCTTGCTTT+GGG 0.360695 8_3:-59667383 None:intergenic
AGGTAATTAATCACCAATTT+GGG 0.361400 8_3:-59663008 None:intergenic
GTAAACTCTTCATGGATTAC+TGG 0.375451 8_3:-59665898 None:intergenic
AGTAAAACCTGAACGTGTTC+CGG 0.389438 8_3:-59661162 None:intergenic
ATAGAATTTAGTTGCGGAAA+AGG 0.391098 8_3:+59667309 Msa1298820:intron
GAGCTCAGAAATCAATTTGA+AGG 0.391677 8_3:+59667830 Msa1298820:CDS
AAATAAAATGATAAACTAGT+AGG 0.395671 8_3:+59660756 None:intergenic
GCTGAAGTAGAAGCTGCTTC+TGG 0.396795 8_3:+59661449 Msa1298820:CDS
GATTCAGTCACGGTGGCGTA+TGG 0.400512 8_3:-59669724 None:intergenic
CTGATGATTTCAGTGCTTGA+AGG 0.408490 8_3:-59663028 None:intergenic
TACAGAGTTGCAGAAACATA+TGG 0.411106 8_3:+59668684 Msa1298820:intron
AGTAGGGTGGTCGAGAAGTA+TGG 0.415038 8_3:+59660773 Msa1298820:five_prime_UTR
CAAGAGGAAAATGAAGAGAT+TGG 0.415809 8_3:+59667430 Msa1298820:CDS
TGAACAAAGAAATGAAAATT+GGG 0.419985 8_3:-59660858 None:intergenic
AGTAGAGTCCTTAGCGGATC+AGG 0.430293 8_3:+59663049 Msa1298820:CDS
AGAATTACGTCGTCGAGAGT+TGG 0.443671 8_3:-59661040 None:intergenic
TTGGCTTGAGTTGAGCTTTG+AGG 0.443751 8_3:-59664892 None:intergenic
ATGAAAATTGGGCTTCGGCT+TGG 0.445291 8_3:-59660847 None:intergenic
ATTTGCTCTCCCGTTCTCTC+TGG 0.447211 8_3:-59669470 None:intergenic
CTGAGTGAAGTAGCTGTTGC+TGG 0.458633 8_3:-59660973 None:intergenic
TTTACTTCCCAAAGCAAGAT+GGG 0.460062 8_3:+59667376 Msa1298820:CDS
GATTTCGGAGAACGATTTAC+CGG 0.460869 8_3:+59661143 Msa1298820:CDS
AAGAAATGAAAATTGGGCTT+CGG 0.461713 8_3:-59660852 None:intergenic
TGGGGAAGACATGGTGAAGC+TGG 0.462098 8_3:-59661020 None:intergenic
CACAATACGAGATTCAGAAT+TGG 0.466801 8_3:+59662800 Msa1298820:CDS
AAGTAGCTGTTGCTGGTACT+TGG 0.471985 8_3:-59660966 None:intergenic
CAAATGCAGCACGTAATGCC+AGG 0.472508 8_3:+59669488 Msa1298820:exon
TCTTCTGCTGAATTTGATGA+TGG 0.474662 8_3:+59661287 Msa1298820:CDS
ACAATTTCAGTCTGCTGTAC+GGG 0.475571 8_3:+59664868 Msa1298820:intron
TTGCAGTCTTCAAGACTGTA+AGG 0.477309 8_3:+59661604 Msa1298820:intron
GCTGCTTCTGGTGTTACAAC+CGG 0.483880 8_3:+59661461 Msa1298820:CDS
AACAATTTCAGTCTGCTGTA+CGG 0.486423 8_3:+59664867 Msa1298820:intron
ATTTACTTCCCAAAGCAAGA+TGG 0.488868 8_3:+59667375 Msa1298820:CDS
GCGAAGAGACAAAATCATTC+CGG 0.489304 8_3:-59661480 None:intergenic
TCAGCTTCTCTCCGATTCTA+GGG 0.490433 8_3:+59660992 Msa1298820:five_prime_UTR
GATTGGGCTTCAAGCTTCTG+AGG 0.495982 8_3:+59667447 Msa1298820:CDS
CAAGATGGGGAAGTTGCTAA+TGG 0.504381 8_3:+59667390 Msa1298820:CDS
AAGAGGAAAATGAAGAGATT+GGG 0.505513 8_3:+59667431 Msa1298820:CDS
ATGTTCAACTCCATATGTTC+AGG 0.506370 8_3:+59669756 Msa1298820:three_prime_UTR
AATGCACCATTCATACCTGC+TGG 0.506971 8_3:+59662838 Msa1298820:CDS
TAGATACTGTAAGTCATAAG+AGG 0.508307 8_3:+59661264 Msa1298820:intron
TATGTTACCTTCTTTCCGTA+AGG 0.520035 8_3:-59661326 None:intergenic
AACAATACCTGCATTGATGT+TGG 0.525374 8_3:-59664911 None:intergenic
AATAAAATGATAAACTAGTA+GGG 0.529613 8_3:+59660757 None:intergenic
TATTTGTTATCAGCTTGAAA+AGG 0.532310 8_3:+59663160 Msa1298820:intron
GCTTCAAGCTTCTGAGGGAA+AGG 0.532560 8_3:+59667453 Msa1298820:CDS
TATATTTAAGAATGAACTTG+AGG 0.535382 8_3:+59662774 Msa1298820:intron
GTGGTCCCAGCAGGTATGAA+TGG 0.536045 8_3:-59662844 None:intergenic
GAAATGGTTAATTACTTCTG+TGG 0.537939 8_3:+59669578 Msa1298820:three_prime_UTR
TAATGATCCTTACGGAAAGA+AGG 0.539652 8_3:+59661319 Msa1298820:CDS
ATTCAGTCACGGTGGCGTAT+GGG 0.542914 8_3:-59669723 None:intergenic
AGTATCATCTCGTCAATCCC+TGG 0.546748 8_3:-59669506 None:intergenic
TAACCTGGTGTGGTCCCAGC+AGG 0.549468 8_3:-59662853 None:intergenic
ATACCTGCTGGGACCACACC+AGG 0.553859 8_3:+59662850 Msa1298820:CDS
TATTTAAATTGCAGGCAAGA+AGG 0.559968 8_3:+59665863 Msa1298820:intron
AATTACGTCGTCGAGAGTTG+GGG 0.561904 8_3:-59661038 None:intergenic
TGTGGAAAGATCAAATGAAA+CGG 0.567946 8_3:+59668723 Msa1298820:CDS
CTTGGGAGAGATGAAAATGA+GGG 0.573038 8_3:-59660817 None:intergenic
AGGGTGGTCGAGAAGTATGG+TGG 0.576529 8_3:+59660776 Msa1298820:five_prime_UTR
GGAAACGCTTGATTCGTGCT+TGG 0.577281 8_3:+59661625 Msa1298820:CDS
GCAAGGTAAATTAGACGAGA+AGG 0.580209 8_3:+59669401 Msa1298820:CDS
ATCATCAGTAGAGTCCTTAG+CGG 0.584514 8_3:+59663043 Msa1298820:CDS
GTTGCTGGTACTTGGAGTAG+AGG 0.585831 8_3:-59660958 None:intergenic
ATTGGGCTTCAAGCTTCTGA+GGG 0.585994 8_3:+59667448 Msa1298820:CDS
ACTCAAGCCAACATCAATGC+AGG 0.586843 8_3:+59664904 Msa1298820:CDS
CAGTCACGGTGGCGTATGGG+TGG 0.590923 8_3:-59669720 None:intergenic
GTCGAGAGTTGGGGAAGACA+TGG 0.592053 8_3:-59661029 None:intergenic
CTCATCATAGAATTTAGTTG+CGG 0.594727 8_3:+59667303 Msa1298820:intron
TAAATGTAAAACTCTGCAAG+AGG 0.603180 8_3:+59667414 Msa1298820:CDS
GGAAAAGGACACAAGACTAA+AGG 0.604232 8_3:+59667324 Msa1298820:CDS
TGGATTTGAGAAAATTGTTG+AGG 0.604732 8_3:+59669788 Msa1298820:three_prime_UTR
ATGCACCATTCATACCTGCT+GGG 0.605615 8_3:+59662839 Msa1298820:CDS
GGGTGGTCGAGAAGTATGGT+GGG 0.607491 8_3:+59660777 Msa1298820:five_prime_UTR
AACTGTGATTTACTATTGCT+AGG 0.621168 8_3:+59669666 Msa1298820:three_prime_UTR
GCTTGGGAGAGATGAAAATG+AGG 0.622456 8_3:-59660818 None:intergenic
TGAACATATGGAGTTGAACA+TGG 0.622874 8_3:-59669754 None:intergenic
GCAAGAGATAGCAAAGCTGA+AGG 0.638072 8_3:+59663229 Msa1298820:CDS
TTACTTCCCAAAGCAAGATG+GGG 0.638560 8_3:+59667377 Msa1298820:CDS
ACGTACAAACTAACCTGGTG+TGG 0.639868 8_3:-59662863 None:intergenic
GAGTTGCAGAAACATATGGA+TGG 0.643387 8_3:+59668688 Msa1298820:intron
GGATGGTTTGACCAATGATG+TGG 0.644456 8_3:+59668705 Msa1298820:CDS
AAATGCAGCACGTAATGCCA+GGG 0.649838 8_3:+59669489 Msa1298820:exon
TTGGGAGAGATGAAAATGAG+GGG 0.653039 8_3:-59660816 None:intergenic
TGGGAGAGATGAAAATGAGG+GGG 0.656863 8_3:-59660815 None:intergenic
AAAATGATAAACTAGTAGGG+TGG 0.673724 8_3:+59660760 Msa1298820:five_prime_UTR
TGGTACTCATGATTCAGTCA+CGG 0.682177 8_3:-59669734 None:intergenic
TGTGATTTACTATTGCTAGG+TGG 0.700981 8_3:+59669669 Msa1298820:three_prime_UTR
TAATCCATGAAGAGTTTACG+CGG 0.731754 8_3:+59665902 Msa1298820:CDS
TACTCATGATTCAGTCACGG+TGG 0.745180 8_3:-59669731 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTTTAAAATATATTG+TGG + chr8_3:59664018-59664037 Msa1298820:intron 10.0%
!!! TTAAATCAATTTTGATTTTT+TGG + chr8_3:59665965-59665984 Msa1298820:intron 10.0%
!! ATAAATTAATATATATGTAG+CGG - chr8_3:59666350-59666369 None:intergenic 10.0%
!! TATATTAATTTATTTACAGA+AGG + chr8_3:59666357-59666376 Msa1298820:intron 10.0%
!! TAAATTGAAAATTGTAATGT+TGG + chr8_3:59661402-59661421 Msa1298820:intron 15.0%
!!! CTTTTAAATTATGTTATTGA+AGG + chr8_3:59661913-59661932 Msa1298820:intron 15.0%
!! TAAAAAAGAAATAATTTCTC+AGG - chr8_3:59662976-59662995 None:intergenic 15.0%
!! ATAAATATGATCAATGTATA+AGG - chr8_3:59663122-59663141 None:intergenic 15.0%
!!! AAAATCATTTTTCATGTTTT+AGG + chr8_3:59663669-59663688 Msa1298820:intron 15.0%
!! ATAGTATTAGTATTTAGTAT+TGG - chr8_3:59664155-59664174 None:intergenic 15.0%
!! AAAAAGATTCAATTAAAACA+CGG - chr8_3:59664267-59664286 None:intergenic 15.0%
!! ACCATAAACATATATTTAAT+GGG - chr8_3:59665693-59665712 None:intergenic 15.0%
!! TACCATAAACATATATTTAA+TGG - chr8_3:59665694-59665713 None:intergenic 15.0%
!!! TGTATTTTGATTTTCATTTT+AGG - chr8_3:59666383-59666402 None:intergenic 15.0%
!!! AAGAAAAAACACTTTTATTT+AGG + chr8_3:59666700-59666719 Msa1298820:intron 15.0%
!! ATAAACAATATTGACAAATT+AGG - chr8_3:59667717-59667736 None:intergenic 15.0%
!! TCAATGTATGTTTAAAAAAA+GGG - chr8_3:59668207-59668226 None:intergenic 15.0%
!! ATCAAAGATAAAAATAATGA+CGG + chr8_3:59668356-59668375 Msa1298820:intron 15.0%
!! TATTAACTTAGTAATGATAA+AGG + chr8_3:59668455-59668474 Msa1298820:intron 15.0%
!!! ATTAAAAGTTATGCAATTTT+TGG + chr8_3:59668611-59668630 Msa1298820:intron 15.0%
!! TGAACAAAGAAATGAAAATT+GGG - chr8_3:59660861-59660880 None:intergenic 20.0%
!!! ATTAACATGTGAATTTTTTG+AGG - chr8_3:59661193-59661212 None:intergenic 20.0%
!! TTACAGTATCTAATTCATAA+CGG - chr8_3:59661256-59661275 None:intergenic 20.0%
!!! AATTTTGATAATGATCCTTA+CGG + chr8_3:59661311-59661330 Msa1298820:CDS 20.0%
!!! AAAAATCCAGTAAGAATTTT+AGG - chr8_3:59661569-59661588 None:intergenic 20.0%
!! ATTCCAATAAACCATTAATT+TGG + chr8_3:59661698-59661717 Msa1298820:intron 20.0%
!!! GTCAGATTTTATATACTTTA+GGG - chr8_3:59661784-59661803 None:intergenic 20.0%
!!! TGTCAGATTTTATATACTTT+AGG - chr8_3:59661785-59661804 None:intergenic 20.0%
!!! TGACGGATTTTATATAATTT+AGG + chr8_3:59661839-59661858 Msa1298820:intron 20.0%
!!! GACGGATTTTATATAATTTA+GGG + chr8_3:59661840-59661859 Msa1298820:intron 20.0%
!! AATTATGTTATTGAAGGAAA+TGG + chr8_3:59661919-59661938 Msa1298820:intron 20.0%
!! AAAAAAATAGAGAAAACAGA+GGG - chr8_3:59662288-59662307 None:intergenic 20.0%
!! GAAATAAATAGAGAAAATAG+AGG - chr8_3:59662370-59662389 None:intergenic 20.0%
!! TATATTTAAGAATGAACTTG+AGG + chr8_3:59662774-59662793 Msa1298820:intron 20.0%
!!! ATAGAATTTTAGATTCTGAA+TGG - chr8_3:59663080-59663099 None:intergenic 20.0%
!!! TTCTATTTTTTGCTTCAAAA+TGG + chr8_3:59663094-59663113 Msa1298820:intron 20.0%
!! TAACAAATATAAATGTCGAA+GGG - chr8_3:59663149-59663168 None:intergenic 20.0%
!! ATAACAAATATAAATGTCGA+AGG - chr8_3:59663150-59663169 None:intergenic 20.0%
!! TTAATTATATATTCTCTCCT+GGG - chr8_3:59663338-59663357 None:intergenic 20.0%
!! TTAACAGAATAAGAAGAAAT+TGG + chr8_3:59663354-59663373 Msa1298820:intron 20.0%
!!! TTACACACAAAATGATTTTT+GGG - chr8_3:59663753-59663772 None:intergenic 20.0%
!!! ATTACACACAAAATGATTTT+TGG - chr8_3:59663754-59663773 None:intergenic 20.0%
!!! TTAGATAAGTTTTGATAACA+TGG + chr8_3:59664365-59664384 Msa1298820:intron 20.0%
!! AACATTGTATTAGAATCATT+GGG - chr8_3:59664502-59664521 None:intergenic 20.0%
!! TAACATTGTATTAGAATCAT+TGG - chr8_3:59664503-59664522 None:intergenic 20.0%
!! TGAAATGTGTTGTAATAATA+GGG - chr8_3:59664567-59664586 None:intergenic 20.0%
!!! TATTATTTTACAGATGTTAG+TGG + chr8_3:59664781-59664800 Msa1298820:intron 20.0%
!! TATGTTGTATGACATTTAAT+AGG + chr8_3:59665107-59665126 Msa1298820:intron 20.0%
!! TCCCATTAAATATATGTTTA+TGG + chr8_3:59665689-59665708 Msa1298820:intron 20.0%
!! TCTAAAAAGTTATCAAATAG+CGG + chr8_3:59665730-59665749 Msa1298820:intron 20.0%
!! ATAGGAGCTTATTATATTTA+GGG + chr8_3:59666222-59666241 Msa1298820:intron 20.0%
!!! GACATATTTTTTCTTCAAAT+GGG + chr8_3:59666244-59666263 Msa1298820:intron 20.0%
!!! ACATATTTTTTCTTCAAATG+GGG + chr8_3:59666245-59666264 Msa1298820:intron 20.0%
!! ATTGCTAACGTAAAAAATAT+AGG + chr8_3:59666315-59666334 Msa1298820:intron 20.0%
!!! AGAAATATTTTTTTCTCTCT+TGG - chr8_3:59666600-59666619 None:intergenic 20.0%
!! TCTTTAATTAATATGAAGCA+CGG - chr8_3:59666809-59666828 None:intergenic 20.0%
!! TGCTTCATATTAATTAAAGA+CGG + chr8_3:59666809-59666828 Msa1298820:intron 20.0%
!! GCAAAAAGAAATAAAAAAGA+AGG - chr8_3:59667751-59667770 None:intergenic 20.0%
!!! CTTTTTTATTTCTTTTTGCT+TGG + chr8_3:59667752-59667771 Msa1298820:intron 20.0%
!! CTCAATGTATGTTTAAAAAA+AGG - chr8_3:59668208-59668227 None:intergenic 20.0%
!! GTGTTAGATAATAAAGTATA+GGG - chr8_3:59668495-59668514 None:intergenic 20.0%
!! AGTGTTAGATAATAAAGTAT+AGG - chr8_3:59668496-59668515 None:intergenic 20.0%
!! ACTTAATAGTATTATTGTGT+GGG + chr8_3:59668513-59668532 Msa1298820:intron 20.0%
!! ATGTTATAAGATTGAAAACT+AGG + chr8_3:59668587-59668606 Msa1298820:intron 20.0%
!! TGTTATAAGATTGAAAACTA+GGG + chr8_3:59668588-59668607 Msa1298820:intron 20.0%
!! AATACAATTAACAAAGCTTA+GGG - chr8_3:59669148-59669167 None:intergenic 20.0%
!! AAATACAATTAACAAAGCTT+AGG - chr8_3:59669149-59669168 None:intergenic 20.0%
!!! ATTGTATTTCGCATTTTTTA+TGG + chr8_3:59669160-59669179 Msa1298820:intron 20.0%
!! TACGATAGTTATAATTCTTA+TGG - chr8_3:59669696-59669715 None:intergenic 20.0%
! CTGAACAAAGAAATGAAAAT+TGG - chr8_3:59660862-59660881 None:intergenic 25.0%
!! ATAGTTTAGGACCAAATTAA+TGG - chr8_3:59661712-59661731 None:intergenic 25.0%
! TACATAATTTAGGGACTAAA+TGG - chr8_3:59661746-59661765 None:intergenic 25.0%
!!! TATTTTAGGGACTAAATTGA+TGG + chr8_3:59661884-59661903 Msa1298820:intron 25.0%
! ATATGCACATTAAATTCCTT+AGG - chr8_3:59662025-59662044 None:intergenic 25.0%
! CAAAAAAATAGAGAAAACAG+AGG - chr8_3:59662289-59662308 None:intergenic 25.0%
! AGTTACATATATAACAGTCT+AGG + chr8_3:59662574-59662593 Msa1298820:intron 25.0%
! TCTTTCCTAAAATTGTTTAC+TGG + chr8_3:59662744-59662763 Msa1298820:intron 25.0%
!! ATGATCCAGTAAACAATTTT+AGG - chr8_3:59662752-59662771 None:intergenic 25.0%
! AGGTAATTAATCACCAATTT+GGG - chr8_3:59663011-59663030 None:intergenic 25.0%
! AAGGTAATTAATCACCAATT+TGG - chr8_3:59663012-59663031 None:intergenic 25.0%
!!! TATTTGTTATCAGCTTGAAA+AGG + chr8_3:59663160-59663179 Msa1298820:intron 25.0%
! AAACTGTTCTTTATAGTATC+TGG + chr8_3:59663265-59663284 Msa1298820:intron 25.0%
! TAATTATATATTCTCTCCTG+GGG - chr8_3:59663337-59663356 None:intergenic 25.0%
! GTTAATTATATATTCTCTCC+TGG - chr8_3:59663339-59663358 None:intergenic 25.0%
!!! GGTGTTTTTTTTTTTTTGAG+AGG + chr8_3:59663690-59663709 Msa1298820:intron 25.0%
!! CATAAAAGAATGCTTTTAAC+AGG - chr8_3:59663904-59663923 None:intergenic 25.0%
!! TTTCAATTTGTCATTTATCG+AGG + chr8_3:59664041-59664060 Msa1298820:intron 25.0%
! TATTTGATTCTGTATTCAGT+TGG + chr8_3:59664103-59664122 Msa1298820:intron 25.0%
! ATTTGATTCTGTATTCAGTT+GGG + chr8_3:59664104-59664123 Msa1298820:intron 25.0%
!! CTTTTGTAATGACTAATAGT+TGG - chr8_3:59664206-59664225 None:intergenic 25.0%
! TTTGTTCAAAACTGTGTTAT+GGG - chr8_3:59664303-59664322 None:intergenic 25.0%
! ATTTGTTCAAAACTGTGTTA+TGG - chr8_3:59664304-59664323 None:intergenic 25.0%
! TAATAATAGGGTTTAGATAG+AGG - chr8_3:59664555-59664574 None:intergenic 25.0%
! GTGAAATGTGTTGTAATAAT+AGG - chr8_3:59664568-59664587 None:intergenic 25.0%
!!! ATTTTGAAACCAATTCATTC+TGG + chr8_3:59664627-59664646 Msa1298820:intron 25.0%
!! TCATGCATATTAATTTGAGA+AGG + chr8_3:59664998-59665017 Msa1298820:intron 25.0%
!! CATGCATATTAATTTGAGAA+GGG + chr8_3:59664999-59665018 Msa1298820:intron 25.0%
! AGTCATAAACAATATCTAAG+TGG - chr8_3:59665052-59665071 None:intergenic 25.0%
! AAGTGATTGCACAATATTAT+TGG + chr8_3:59665132-59665151 Msa1298820:intron 25.0%
! TGTGGTTGTTATCAATATTA+AGG + chr8_3:59665262-59665281 Msa1298820:intron 25.0%
!!! AACATTCATTTGAGTTTTGT+TGG + chr8_3:59665584-59665603 Msa1298820:intron 25.0%
! AAACATAAGGCAATAATTTC+GGG - chr8_3:59665837-59665856 None:intergenic 25.0%
! CAAACATAAGGCAATAATTT+CGG - chr8_3:59665838-59665857 None:intergenic 25.0%
! TTAAATAGCAACCAAACATA+AGG - chr8_3:59665850-59665869 None:intergenic 25.0%
! ATCAAATGGTCTAACATTAA+AGG - chr8_3:59666100-59666119 None:intergenic 25.0%
! AATAAGAACCCCAAATTAAA+GGG - chr8_3:59666139-59666158 None:intergenic 25.0%
! TAATAAGAACCCCAAATTAA+AGG - chr8_3:59666140-59666159 None:intergenic 25.0%
!!! TTTAATTTGGGGTTCTTATT+AGG + chr8_3:59666139-59666158 Msa1298820:intron 25.0%
!! TTAATTTGGGGTTCTTATTA+GGG + chr8_3:59666140-59666159 Msa1298820:intron 25.0%
! CATAGGAGCTTATTATATTT+AGG + chr8_3:59666221-59666240 Msa1298820:intron 25.0%
!!! GGACATATTTTTTCTTCAAA+TGG + chr8_3:59666243-59666262 Msa1298820:intron 25.0%
! TTCATATTAATTAAAGACGG+AGG + chr8_3:59666812-59666831 Msa1298820:intron 25.0%
! TCATATTAATTAAAGACGGA+GGG + chr8_3:59666813-59666832 Msa1298820:intron 25.0%
!! TTTTTGCGAAAAAAAGAGAA+AGG + chr8_3:59666867-59666886 Msa1298820:intron 25.0%
!! AGTTATCATTTTCATCTGTA+TGG - chr8_3:59666944-59666963 None:intergenic 25.0%
! AGATGAAAATGATAACTTCT+AGG + chr8_3:59666947-59666966 Msa1298820:intron 25.0%
!! CTTTAATTTCAGTGATGAAT+CGG + chr8_3:59667023-59667042 Msa1298820:intron 25.0%
! CTAATATATGTAGGAAATTG+GGG - chr8_3:59667208-59667227 None:intergenic 25.0%
! CCTAATATATGTAGGAAATT+GGG - chr8_3:59667209-59667228 None:intergenic 25.0%
! TCCTAATATATGTAGGAAAT+TGG - chr8_3:59667210-59667229 None:intergenic 25.0%
! TTCCTACATATATTAGGAAT+TGG + chr8_3:59667212-59667231 Msa1298820:intron 25.0%
! AACCAATTCCTAATATATGT+AGG - chr8_3:59667217-59667236 None:intergenic 25.0%
! AACTGAGAAAACAAAGTTTA+TGG + chr8_3:59667631-59667650 Msa1298820:intron 25.0%
! AGTTTATGGTATTTATTGAC+TGG + chr8_3:59667645-59667664 Msa1298820:intron 25.0%
! TAGCCATGTAATGATATAAA+GGG - chr8_3:59667909-59667928 None:intergenic 25.0%
! TGTTTCTTCTGTTACTATAT+TGG + chr8_3:59667942-59667961 Msa1298820:intron 25.0%
! TAAACATACATTGAGAATAG+AGG + chr8_3:59668011-59668030 Msa1298820:intron 25.0%
! AAACATACATTGAGAATAGA+GGG + chr8_3:59668012-59668031 Msa1298820:intron 25.0%
! TATTGAGAAAATTACATGTG+TGG + chr8_3:59668259-59668278 Msa1298820:intron 25.0%
! ATTGAGAAAATTACATGTGT+GGG + chr8_3:59668260-59668279 Msa1298820:intron 25.0%
! CAATAGCTTAATACTACAAA+AGG + chr8_3:59668400-59668419 Msa1298820:intron 25.0%
! TACTAAGTTAATAGTCTGTT+AGG - chr8_3:59668448-59668467 None:intergenic 25.0%
! CACTTAATAGTATTATTGTG+TGG + chr8_3:59668512-59668531 Msa1298820:intron 25.0%
!!! CAGTGAAGTTTTTTAAATCA+CGG - chr8_3:59668778-59668797 None:intergenic 25.0%
!!! ATGAAGATAAGCATTGTTTT+AGG + chr8_3:59668859-59668878 Msa1298820:intron 25.0%
!! TCAACAAAACTTTTGTCTTA+GGG + chr8_3:59668898-59668917 Msa1298820:intron 25.0%
! CACAAATGCTAATATGAAAT+AGG + chr8_3:59668938-59668957 Msa1298820:intron 25.0%
! TTTGAGTGATAAGAAAATCA+TGG + chr8_3:59669026-59669045 Msa1298820:intron 25.0%
! TTGAGTGATAAGAAAATCAT+GGG + chr8_3:59669027-59669046 Msa1298820:intron 25.0%
! ATACAATTAACAAAGCTTAG+GGG - chr8_3:59669147-59669166 None:intergenic 25.0%
! ATGTTTGTATTGTGTAAATG+TGG + chr8_3:59669191-59669210 Msa1298820:intron 25.0%
!!! TTTTATGCCGTTATTTTTCA+AGG + chr8_3:59669226-59669245 Msa1298820:intron 25.0%
!!! TTTATGCCGTTATTTTTCAA+GGG + chr8_3:59669227-59669246 Msa1298820:intron 25.0%
! ACAATTAAACAAGAATACGA+TGG - chr8_3:59669328-59669347 None:intergenic 25.0%
!! TATTCTTGTTTAATTGTCCA+AGG + chr8_3:59669331-59669350 Msa1298820:intron 25.0%
!! AGATTTTAAACAGATATCAC+TGG + chr8_3:59669534-59669553 Msa1298820:three_prime_UTR 25.0%
!!! GACTTCAATTTTTTTGTTGT+CGG + chr8_3:59669556-59669575 Msa1298820:three_prime_UTR 25.0%
!!! AATTTTTTTGTTGTCGGAAA+TGG + chr8_3:59669562-59669581 Msa1298820:three_prime_UTR 25.0%
AAAATGATAAACTAGTAGGG+TGG + chr8_3:59660760-59660779 Msa1298820:five_prime_UTR 30.0%
AAGAAATGAAAATTGGGCTT+CGG - chr8_3:59660855-59660874 None:intergenic 30.0%
TAGATACTGTAAGTCATAAG+AGG + chr8_3:59661264-59661283 Msa1298820:intron 30.0%
TTTCAGCCTAAAATTCTTAC+TGG + chr8_3:59661560-59661579 Msa1298820:intron 30.0%
GGACCAAATTAATGGTTTAT+TGG - chr8_3:59661704-59661723 None:intergenic 30.0%
GATGTTAAGGACTAAATTGA+CGG + chr8_3:59661822-59661841 Msa1298820:intron 30.0%
TAGATGAATCTAACCCTAAA+TGG - chr8_3:59662076-59662095 None:intergenic 30.0%
CGAAAAAACAGAGAAAATAG+AGG - chr8_3:59662329-59662348 None:intergenic 30.0%
!!! ATTTTCTCTGTTTTTTCGCT+TGG + chr8_3:59662331-59662350 Msa1298820:intron 30.0%
GGAAAGAAAAAGCTATAACT+AGG - chr8_3:59662731-59662750 None:intergenic 30.0%
AATTATATATTCTCTCCTGG+GGG - chr8_3:59663336-59663355 None:intergenic 30.0%
AAGTAAAACGACACTTGTTT+GGG - chr8_3:59663562-59663581 None:intergenic 30.0%
AAAGTAAAACGACACTTGTT+TGG - chr8_3:59663563-59663582 None:intergenic 30.0%
GTATTGCTTGAAAGATAAGA+TGG - chr8_3:59663822-59663841 None:intergenic 30.0%
AATATAAGCTCCGTAAAACA+TGG - chr8_3:59663865-59663884 None:intergenic 30.0%
AATACTATAACCAGTACTCT+AGG + chr8_3:59664167-59664186 Msa1298820:intron 30.0%
AAGATTCAATTAAAACACGG+TGG - chr8_3:59664264-59664283 None:intergenic 30.0%
CACATTTCACAATTCGTTAT+AGG + chr8_3:59664578-59664597 Msa1298820:intron 30.0%
AATTCGTTATAGGAACTGTA+TGG + chr8_3:59664588-59664607 Msa1298820:intron 30.0%
ATCAAGACTCAACAATCATA+TGG - chr8_3:59664672-59664691 None:intergenic 30.0%
! ACTTTCATTTTCCATATGTC+AGG + chr8_3:59664708-59664727 Msa1298820:intron 30.0%
AAATACAAACACCTGACATA+TGG - chr8_3:59664722-59664741 None:intergenic 30.0%
GATACACTCAAATACTTGTA+TGG - chr8_3:59664939-59664958 None:intergenic 30.0%
TTATTGGATGATTTCATGCT+AGG + chr8_3:59665148-59665167 Msa1298820:intron 30.0%
!!! CGCTTATTTTATTCTTGTCT+TGG - chr8_3:59665233-59665252 None:intergenic 30.0%
TCAAATGAATGTTCTAGCAT+GGG - chr8_3:59665577-59665596 None:intergenic 30.0%
CGAAATTATTGCCTTATGTT+TGG + chr8_3:59665836-59665855 Msa1298820:intron 30.0%
!! TTGGTTGCTATTTAAATTGC+AGG + chr8_3:59665855-59665874 Msa1298820:intron 30.0%
TATTTAAATTGCAGGCAAGA+AGG + chr8_3:59665863-59665882 Msa1298820:intron 30.0%
!!! TTGATTTTTTGGCATGAAGT+CGG + chr8_3:59665976-59665995 Msa1298820:intron 30.0%
!!! TCGGGTAAATGTTTTAATTC+AGG + chr8_3:59665995-59666014 Msa1298820:intron 30.0%
ATAAAACTATGACGACAACA+TGG - chr8_3:59666042-59666061 None:intergenic 30.0%
TAATGTTAGACCATTTGATG+AGG + chr8_3:59666101-59666120 Msa1298820:intron 30.0%
AATGTTAGACCATTTGATGA+GGG + chr8_3:59666102-59666121 Msa1298820:intron 30.0%
! TAATTTGGGGTTCTTATTAG+GGG + chr8_3:59666141-59666160 Msa1298820:intron 30.0%
CAAACATAGCCCTTATTAAT+GGG - chr8_3:59666169-59666188 None:intergenic 30.0%
TAATATATATGTAGCGGTGT+CGG - chr8_3:59666344-59666363 None:intergenic 30.0%
TTGAGAAACGTTGATCAATT+AGG - chr8_3:59666544-59666563 None:intergenic 30.0%
ACATATGTATCTCGTGTATA+CGG + chr8_3:59666565-59666584 Msa1298820:intron 30.0%
TATGAGTGTTATATAGGTGT+CGG + chr8_3:59666652-59666671 Msa1298820:intron 30.0%
AAAAAAGAGAAAGGTGGAAA+TGG + chr8_3:59666876-59666895 Msa1298820:intron 30.0%
AAAAAGAGAAAGGTGGAAAT+GGG + chr8_3:59666877-59666896 Msa1298820:intron 30.0%
! TTCTCTCTAGTTTGATTATC+TGG + chr8_3:59666906-59666925 Msa1298820:intron 30.0%
AAATGATAACTTCTAGGTGT+TGG + chr8_3:59666953-59666972 Msa1298820:intron 30.0%
AATGATAACTTCTAGGTGTT+GGG + chr8_3:59666954-59666973 Msa1298820:intron 30.0%
ATAAGTTTCTGAGTTGTGTT+TGG + chr8_3:59667057-59667076 Msa1298820:intron 30.0%
TAAGCCACAAGAAAAAGAAA+TGG - chr8_3:59667135-59667154 None:intergenic 30.0%
CCCAATTTCCTACATATATT+AGG + chr8_3:59667206-59667225 Msa1298820:intron 30.0%
TATAGACGCATTATTCACAT+TGG + chr8_3:59667245-59667264 Msa1298820:intron 30.0%
! GAAGTCTTGTAAAAAAGAGT+TGG - chr8_3:59667279-59667298 None:intergenic 30.0%
CTCATCATAGAATTTAGTTG+CGG + chr8_3:59667303-59667322 Msa1298820:intron 30.0%
ATAGAATTTAGTTGCGGAAA+AGG + chr8_3:59667309-59667328 Msa1298820:intron 30.0%
TAAATGTAAAACTCTGCAAG+AGG + chr8_3:59667414-59667433 Msa1298820:CDS 30.0%
AAGAGGAAAATGAAGAGATT+GGG + chr8_3:59667431-59667450 Msa1298820:CDS 30.0%
TACCTCATTCATTTCAAAGT+TGG + chr8_3:59667535-59667554 Msa1298820:intron 30.0%
!! AACCAACTTTGAAATGAATG+AGG - chr8_3:59667540-59667559 None:intergenic 30.0%
ACAGCAGATATATAGAATGT+GGG - chr8_3:59667571-59667590 None:intergenic 30.0%
TACAGCAGATATATAGAATG+TGG - chr8_3:59667572-59667591 None:intergenic 30.0%
TGAGTGATTTCATCACATTA+TGG + chr8_3:59667861-59667880 Msa1298820:intron 30.0%
GATTTCATCACATTATGGTT+TGG + chr8_3:59667866-59667885 Msa1298820:intron 30.0%
TGACCCTTTATATCATTACA+TGG + chr8_3:59667903-59667922 Msa1298820:intron 30.0%
GTAGCCATGTAATGATATAA+AGG - chr8_3:59667910-59667929 None:intergenic 30.0%
TATATCATTACATGGCTACT+TGG + chr8_3:59667911-59667930 Msa1298820:intron 30.0%
CTATATTGGATTCATCAAAC+AGG + chr8_3:59667956-59667975 Msa1298820:intron 30.0%
AACATACATTGAGAATAGAG+GGG + chr8_3:59668013-59668032 Msa1298820:intron 30.0%
AGATAAAAATAATGACGGCT+AGG + chr8_3:59668361-59668380 Msa1298820:intron 30.0%
GATAAAAATAATGACGGCTA+GGG + chr8_3:59668362-59668381 Msa1298820:intron 30.0%
CAAAATGTTAAATGTTCTGC+AGG + chr8_3:59668549-59668568 Msa1298820:intron 30.0%
AACTCTGTAGAAAATGCTAA+GGG - chr8_3:59668673-59668692 None:intergenic 30.0%
ATTTGATCTTTCCACATCAT+TGG - chr8_3:59668719-59668738 None:intergenic 30.0%
TGTGGAAAGATCAAATGAAA+CGG + chr8_3:59668723-59668742 Msa1298820:CDS 30.0%
CACGGTAAAATATGAAAGTA+GGG - chr8_3:59668760-59668779 None:intergenic 30.0%
TCACGGTAAAATATGAAAGT+AGG - chr8_3:59668761-59668780 None:intergenic 30.0%
!!! TTGTTTTAGGAAACCCTTTA+AGG + chr8_3:59668872-59668891 Msa1298820:intron 30.0%
!!! CTAAGACAAAAGTTTTGTTG+AGG - chr8_3:59668899-59668918 None:intergenic 30.0%
! CTCAACAAAACTTTTGTCTT+AGG + chr8_3:59668897-59668916 Msa1298820:intron 30.0%
! AAACTTTTGTCTTAGGGAAA+AGG + chr8_3:59668904-59668923 Msa1298820:intron 30.0%
!! TTTGTTATTATTTCGCCAGA+GGG - chr8_3:59669063-59669082 None:intergenic 30.0%
AAGTGCTTGTGTAGATAATA+TGG + chr8_3:59669081-59669100 Msa1298820:intron 30.0%
AAGATGAGTTGCAACAAAAA+AGG + chr8_3:59669445-59669464 Msa1298820:CDS 30.0%
GAAATGGTTAATTACTTCTG+TGG + chr8_3:59669578-59669597 Msa1298820:three_prime_UTR 30.0%
AACTGTGATTTACTATTGCT+AGG + chr8_3:59669666-59669685 Msa1298820:three_prime_UTR 30.0%
AGCAAAAAATCCTGAACATA+TGG - chr8_3:59669769-59669788 None:intergenic 30.0%
!!! ATATGTTCAGGATTTTTTGC+TGG + chr8_3:59669768-59669787 Msa1298820:three_prime_UTR 30.0%
! CAACAGCAGGAATTTGATTT+CGG + chr8_3:59661128-59661147 Msa1298820:intron 35.0%
TCTTCTGCTGAATTTGATGA+TGG + chr8_3:59661287-59661306 Msa1298820:CDS 35.0%
TAATGATCCTTACGGAAAGA+AGG + chr8_3:59661319-59661338 Msa1298820:CDS 35.0%
TATGTTACCTTCTTTCCGTA+AGG - chr8_3:59661329-59661348 None:intergenic 35.0%
!!! GTAATGTTGGCTCATGTTTT+AGG + chr8_3:59661415-59661434 Msa1298820:intron 35.0%
GGAAGTGAATGTGATAGTTT+AGG - chr8_3:59661725-59661744 None:intergenic 35.0%
AGTCCTTCTGTAAGATGTTA+AGG + chr8_3:59661809-59661828 Msa1298820:intron 35.0%
AGTCCTTAACATCTTACAGA+AGG - chr8_3:59661815-59661834 None:intergenic 35.0%
TTAGGGACTGAATTAGAGAA+AGG + chr8_3:59661857-59661876 Msa1298820:intron 35.0%
TAGGGACTGAATTAGAGAAA+GGG + chr8_3:59661858-59661877 Msa1298820:intron 35.0%
! TAGAGAAAGGGTGGTATTTT+AGG + chr8_3:59661870-59661889 Msa1298820:intron 35.0%
! AGAGAAAGGGTGGTATTTTA+GGG + chr8_3:59661871-59661890 Msa1298820:intron 35.0%
! CAAAACATGTTTGTTGCCTA+AGG + chr8_3:59662006-59662025 Msa1298820:intron 35.0%
CTCGAAATGTCAATACAAAC+AGG + chr8_3:59662050-59662069 Msa1298820:intron 35.0%
TCAATACAAACAGGCCATTT+AGG + chr8_3:59662059-59662078 Msa1298820:intron 35.0%
CAATACAAACAGGCCATTTA+GGG + chr8_3:59662060-59662079 Msa1298820:intron 35.0%
TGTGAACTCTATGAATCATG+TGG + chr8_3:59662120-59662139 Msa1298820:intron 35.0%
GTGAACTCTATGAATCATGT+GGG + chr8_3:59662121-59662140 Msa1298820:intron 35.0%
AGCAAAAAACAGAGGAAACA+GGG - chr8_3:59662260-59662279 None:intergenic 35.0%
GAGAAAATAGAGGAAAACAG+AGG - chr8_3:59662319-59662338 None:intergenic 35.0%
AAAACACGAGAAACGTAACA+CGG - chr8_3:59662432-59662451 None:intergenic 35.0%
GAGTTCACGTAACTAATTGT+TGG + chr8_3:59662534-59662553 Msa1298820:intron 35.0%
AGGTGTAAACATATCCTCTA+CGG + chr8_3:59662594-59662613 Msa1298820:intron 35.0%
! AGATAATTTTCCAACCGTAG+AGG - chr8_3:59662611-59662630 None:intergenic 35.0%
CACAATACGAGATTCAGAAT+TGG + chr8_3:59662800-59662819 Msa1298820:CDS 35.0%
AATTCACGTACAAACTAACC+TGG - chr8_3:59662871-59662890 None:intergenic 35.0%
! ATGCTTTCTAGTACCCAAAT+TGG + chr8_3:59662995-59663014 Msa1298820:intron 35.0%
GCTTGAAAAGGCAAAGAAAA+AGG + chr8_3:59663172-59663191 Msa1298820:intron 35.0%
AGAAGAAATTGGAGTGTAGT+TGG + chr8_3:59663365-59663384 Msa1298820:intron 35.0%
! TGCTAAAGCAACGCTTATTT+TGG - chr8_3:59663526-59663545 None:intergenic 35.0%
TGTTATACTAACTAGCACCT+CGG + chr8_3:59663779-59663798 Msa1298820:intron 35.0%
! TACTTTCCAGCCATGTTTTA+CGG + chr8_3:59663852-59663871 Msa1298820:intron 35.0%
TGAGCTTAAATCATAAGCAG+TGG + chr8_3:59663925-59663944 Msa1298820:intron 35.0%
!! TAAAACACGGTGGTTACTTT+TGG - chr8_3:59664254-59664273 None:intergenic 35.0%
GAAGAGAGAGAGAGAAAAAA+AGG - chr8_3:59664533-59664552 None:intergenic 35.0%
GTTTCAAAATTCCTGACTCT+TGG - chr8_3:59664617-59664636 None:intergenic 35.0%
GACTCAACAATCATATGGAA+AGG - chr8_3:59664667-59664686 None:intergenic 35.0%
AACAATTTCAGTCTGCTGTA+CGG + chr8_3:59664867-59664886 Msa1298820:intron 35.0%
! AACAATACCTGCATTGATGT+TGG - chr8_3:59664914-59664933 None:intergenic 35.0%
CTAAGTGGATCAACAAAGTT+TGG - chr8_3:59665037-59665056 None:intergenic 35.0%
! ATTGATAACAACCACATCTC+TGG - chr8_3:59665258-59665277 None:intergenic 35.0%
AGCACCTATTGTAGAAAAGA+TGG + chr8_3:59665298-59665317 Msa1298820:intron 35.0%
! CCTACCATCTTTTCTACAAT+AGG - chr8_3:59665305-59665324 None:intergenic 35.0%
CCTATTGTAGAAAAGATGGT+AGG + chr8_3:59665302-59665321 Msa1298820:intron 35.0%
TAGAAAAGATGGTAGGAACT+CGG + chr8_3:59665309-59665328 Msa1298820:intron 35.0%
AGGATCTAGAGATTAATGAG+TGG + chr8_3:59665461-59665480 Msa1298820:intron 35.0%
GGATCTAGAGATTAATGAGT+GGG + chr8_3:59665462-59665481 Msa1298820:intron 35.0%
CTCAAATGAATGTTCTAGCA+TGG - chr8_3:59665578-59665597 None:intergenic 35.0%
TATGTGTTCATCAAGACTTG+TGG + chr8_3:59665616-59665635 Msa1298820:intron 35.0%
! ACCAAGCTTTTATTCCCTTA+TGG + chr8_3:59665808-59665827 Msa1298820:intron 35.0%
! CCAAGCTTTTATTCCCTTAT+GGG + chr8_3:59665809-59665828 Msa1298820:intron 35.0%
! GTAAACTCTTCATGGATTAC+TGG - chr8_3:59665901-59665920 None:intergenic 35.0%
TAATCCATGAAGAGTTTACG+CGG + chr8_3:59665902-59665921 Msa1298820:CDS 35.0%
!!! TGATTTTTTGGCATGAAGTC+GGG + chr8_3:59665977-59665996 Msa1298820:intron 35.0%
TGTTTCTTCACTGTATCTCT+GGG - chr8_3:59666068-59666087 None:intergenic 35.0%
ATGTTTCTTCACTGTATCTC+TGG - chr8_3:59666069-59666088 None:intergenic 35.0%
! GTCTATGGTCCCTTTAATTT+GGG + chr8_3:59666127-59666146 Msa1298820:intron 35.0%
!! TCTATGGTCCCTTTAATTTG+GGG + chr8_3:59666128-59666147 Msa1298820:intron 35.0%
CCAAACATAGCCCTTATTAA+TGG - chr8_3:59666170-59666189 None:intergenic 35.0%
CCATTAATAAGGGCTATGTT+TGG + chr8_3:59666167-59666186 Msa1298820:intron 35.0%
AAGCTCCTATGCAAATTACT+AGG - chr8_3:59666212-59666231 None:intergenic 35.0%
AGAAACGTTGATCAATTAGG+AGG - chr8_3:59666541-59666560 None:intergenic 35.0%
GGCTCATATGAGTGTTATAT+AGG + chr8_3:59666646-59666665 Msa1298820:intron 35.0%
GAGTACATTAGAGAAGGAAA+TGG + chr8_3:59666835-59666854 Msa1298820:intron 35.0%
TTGCGAAAAAAAGAGAAAGG+TGG + chr8_3:59666870-59666889 Msa1298820:intron 35.0%
! ATGATAACTTCTAGGTGTTG+GGG + chr8_3:59666955-59666974 Msa1298820:intron 35.0%
! GGTGGTGTTAAATGTATAAC+AGG + chr8_3:59666976-59666995 Msa1298820:intron 35.0%
AATTTCAGTGATGAATCGGA+AGG + chr8_3:59667027-59667046 Msa1298820:intron 35.0%
AATGGAGACACAGTAAATGT+GGG - chr8_3:59667117-59667136 None:intergenic 35.0%
AAATGGAGACACAGTAAATG+TGG - chr8_3:59667118-59667137 None:intergenic 35.0%
! GTCTCCATTTCTTTTTCTTG+TGG + chr8_3:59667128-59667147 Msa1298820:intron 35.0%
ATTTACTTCCCAAAGCAAGA+TGG + chr8_3:59667375-59667394 Msa1298820:CDS 35.0%
TTTACTTCCCAAAGCAAGAT+GGG + chr8_3:59667376-59667395 Msa1298820:CDS 35.0%
CAAGAGGAAAATGAAGAGAT+TGG + chr8_3:59667430-59667449 Msa1298820:CDS 35.0%
AGATATATAGAATGTGGGGA+GGG - chr8_3:59667566-59667585 None:intergenic 35.0%
CAGCAGATATATAGAATGTG+GGG - chr8_3:59667570-59667589 None:intergenic 35.0%
GAGCTCAGAAATCAATTTGA+AGG + chr8_3:59667830-59667849 Msa1298820:CDS 35.0%
!!! CTTACCTTGTTTTACACAAG+AGG - chr8_3:59668109-59668128 None:intergenic 35.0%
CTCTTGTGTAAAACAAGGTA+AGG + chr8_3:59668107-59668126 Msa1298820:intron 35.0%
TGTTTAAAAAAAGGGCAACC+CGG - chr8_3:59668199-59668218 None:intergenic 35.0%
GGGAAATAATTCCCTATTAG+AGG - chr8_3:59668288-59668307 None:intergenic 35.0%
AGCAATACACTCTAAACTCT+GGG - chr8_3:59668308-59668327 None:intergenic 35.0%
TAGCAATACACTCTAAACTC+TGG - chr8_3:59668309-59668328 None:intergenic 35.0%
AGTATAGGGCTTAAGCTATT+GGG - chr8_3:59668481-59668500 None:intergenic 35.0%
AAGTATAGGGCTTAAGCTAT+TGG - chr8_3:59668482-59668501 None:intergenic 35.0%
TAGTATTATTGTGTGGGACT+TGG + chr8_3:59668519-59668538 Msa1298820:intron 35.0%
AGTATTATTGTGTGGGACTT+GGG + chr8_3:59668520-59668539 Msa1298820:intron 35.0%
CAACTCTGTAGAAAATGCTA+AGG - chr8_3:59668674-59668693 None:intergenic 35.0%
TACAGAGTTGCAGAAACATA+TGG + chr8_3:59668684-59668703 Msa1298820:intron 35.0%
!! GTTTTGTTGAGGTCCTTAAA+GGG - chr8_3:59668888-59668907 None:intergenic 35.0%
!!! AGTTTTGTTGAGGTCCTTAA+AGG - chr8_3:59668889-59668908 None:intergenic 35.0%
CTTAGGGAAAAGGCTTATAT+TGG + chr8_3:59668914-59668933 Msa1298820:intron 35.0%
TGCAGATACAGAGTGATATA+AGG + chr8_3:59668972-59668991 Msa1298820:intron 35.0%
! TTGTTATTATTTCGCCAGAG+GGG - chr8_3:59669062-59669081 None:intergenic 35.0%
!! CTTTGTTATTATTTCGCCAG+AGG - chr8_3:59669064-59669083 None:intergenic 35.0%
!!! TTCGCATTTTTTATGGCGTT+AGG + chr8_3:59669167-59669186 Msa1298820:intron 35.0%
ACGAAGCCCTTGAAAAATAA+CGG - chr8_3:59669236-59669255 None:intergenic 35.0%
TGTATGTGTGTCTTAGTCAT+TGG + chr8_3:59669355-59669374 Msa1298820:intron 35.0%
GTATGTGTGTCTTAGTCATT+GGG + chr8_3:59669356-59669375 Msa1298820:intron 35.0%
TGTGATTTACTATTGCTAGG+TGG + chr8_3:59669669-59669688 Msa1298820:three_prime_UTR 35.0%
TGAACATATGGAGTTGAACA+TGG - chr8_3:59669757-59669776 None:intergenic 35.0%
ATGTTCAACTCCATATGTTC+AGG + chr8_3:59669756-59669775 Msa1298820:three_prime_UTR 35.0%
TTGGGAGAGATGAAAATGAG+GGG - chr8_3:59660819-59660838 None:intergenic 40.0%
CTTGGGAGAGATGAAAATGA+GGG - chr8_3:59660820-59660839 None:intergenic 40.0%
TCTGACGCGAAGTTGAAAAA+CGG - chr8_3:59660934-59660953 None:intergenic 40.0%
AGCTGGAAAAACCCTAGAAT+CGG - chr8_3:59661006-59661025 None:intergenic 40.0%
GAGTGAAGTGTGAATGAGAA+AGG - chr8_3:59661079-59661098 None:intergenic 40.0%
CTTTCATTCTTCTCAACAGC+AGG + chr8_3:59661115-59661134 Msa1298820:intron 40.0%
GATTTCGGAGAACGATTTAC+CGG + chr8_3:59661143-59661162 Msa1298820:CDS 40.0%
AGTAAAACCTGAACGTGTTC+CGG - chr8_3:59661165-59661184 None:intergenic 40.0%
!! TTCTACTTCAGCTGTCGTTT+TGG - chr8_3:59661441-59661460 None:intergenic 40.0%
GCGAAGAGACAAAATCATTC+CGG - chr8_3:59661483-59661502 None:intergenic 40.0%
TTGCAGTCTTCAAGACTGTA+AGG + chr8_3:59661604-59661623 Msa1298820:intron 40.0%
CAGCAAAAAACAGAGGAAAC+AGG - chr8_3:59662261-59662280 None:intergenic 40.0%
GGGAAAACAGCAAAAAACAG+AGG - chr8_3:59662268-59662287 None:intergenic 40.0%
ACACGGTTCGTAAATAGGAT+CGG - chr8_3:59662415-59662434 None:intergenic 40.0%
ACGTAACACGGTTCGTAAAT+AGG - chr8_3:59662420-59662439 None:intergenic 40.0%
GTAAACATATCCTCTACGGT+TGG + chr8_3:59662598-59662617 Msa1298820:intron 40.0%
CTGATGATTTCAGTGCTTGA+AGG - chr8_3:59663031-59663050 None:intergenic 40.0%
ATCATCAGTAGAGTCCTTAG+CGG + chr8_3:59663043-59663062 Msa1298820:CDS 40.0%
! ATAGTAAATCCTTTTCCCCC+AGG + chr8_3:59663318-59663337 Msa1298820:intron 40.0%
CTCAAGTAGACAACGTGTTT+GGG - chr8_3:59663466-59663485 None:intergenic 40.0%
ACTCAAGTAGACAACGTGTT+TGG - chr8_3:59663467-59663486 None:intergenic 40.0%
!!! AACGCTTATTTTGGACTGGA+GGG - chr8_3:59663517-59663536 None:intergenic 40.0%
!!! AAGCAACGCTTATTTTGGAC+TGG - chr8_3:59663521-59663540 None:intergenic 40.0%
TAGAACAACTCCTAGAGTAC+TGG - chr8_3:59664180-59664199 None:intergenic 40.0%
ATGCTGAGACCAGAATGAAT+TGG - chr8_3:59664639-59664658 None:intergenic 40.0%
ACAATTTCAGTCTGCTGTAC+GGG + chr8_3:59664868-59664887 Msa1298820:intron 40.0%
AAATAAGCGTACCAGAGATG+TGG + chr8_3:59665244-59665263 Msa1298820:intron 40.0%
AGACCTCTAGCTATGTATTG+AGG + chr8_3:59665359-59665378 Msa1298820:intron 40.0%
TCTCCTCAATACATAGCTAG+AGG - chr8_3:59665365-59665384 None:intergenic 40.0%
TGTATTGAGGAGAGTAGATC+CGG + chr8_3:59665372-59665391 Msa1298820:intron 40.0%
TTATGCCATCGTTTGATCCA+TGG + chr8_3:59665503-59665522 Msa1298820:intron 40.0%
AAAAGTGGGATAGCGTTAGT+GGG - chr8_3:59665760-59665779 None:intergenic 40.0%
!! ACTAACGCTATCCCACTTTT+GGG + chr8_3:59665760-59665779 Msa1298820:intron 40.0%
! AAAGCTTGGTAGTCAAATCC+CGG - chr8_3:59665798-59665817 None:intergenic 40.0%
CCCATAAGGGAATAAAAGCT+TGG - chr8_3:59665812-59665831 None:intergenic 40.0%
ATAATTTCGGGAGCCCATAA+GGG - chr8_3:59665825-59665844 None:intergenic 40.0%
AATAATTTCGGGAGCCCATA+AGG - chr8_3:59665826-59665845 None:intergenic 40.0%
TTAACCGCGTAAACTCTTCA+TGG - chr8_3:59665909-59665928 None:intergenic 40.0%
TGAAGAGTTTACGCGGTTAA+AGG + chr8_3:59665909-59665928 Msa1298820:CDS 40.0%
CGTCTATGGTCCCTTTAATT+TGG + chr8_3:59666126-59666145 Msa1298820:intron 40.0%
ATTAGGGGCTCCCATTAATA+AGG + chr8_3:59666156-59666175 Msa1298820:intron 40.0%
TTAGGGGCTCCCATTAATAA+GGG + chr8_3:59666157-59666176 Msa1298820:intron 40.0%
! ACGCACCTAGTAATTTGCAT+AGG + chr8_3:59666204-59666223 Msa1298820:intron 40.0%
TATCTCGTGTATACGGTGTA+TGG + chr8_3:59666572-59666591 Msa1298820:intron 40.0%
TTTGTATGAGTTGTCCGACA+CGG + chr8_3:59666625-59666644 Msa1298820:intron 40.0%
!!! TCTGAGTTGTGTTTGGCTTT+TGG + chr8_3:59667064-59667083 Msa1298820:intron 40.0%
!! GCTATGAAGGCGTCAATATT+AGG - chr8_3:59667095-59667114 None:intergenic 40.0%
! ACAGTAAATGTGGGCTATGA+AGG - chr8_3:59667108-59667127 None:intergenic 40.0%
GGAAAAGGACACAAGACTAA+AGG + chr8_3:59667324-59667343 Msa1298820:CDS 40.0%
TTACTTCCCAAAGCAAGATG+GGG + chr8_3:59667377-59667396 Msa1298820:CDS 40.0%
GATATATAGAATGTGGGGAG+GGG - chr8_3:59667565-59667584 None:intergenic 40.0%
CAGATATATAGAATGTGGGG+AGG - chr8_3:59667567-59667586 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr8_3:59668058-59668077 Msa1298820:intron 40.0%
ACAGCCTCTTGTGTAAAACA+AGG + chr8_3:59668102-59668121 Msa1298820:intron 40.0%
GATGCGTACAATACACCAAA+TGG + chr8_3:59668129-59668148 Msa1298820:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr8_3:59668133-59668152 Msa1298820:intron 40.0%
ATGTGTGGGTACCTCTAATA+GGG + chr8_3:59668274-59668293 Msa1298820:intron 40.0%
GAGTTGCAGAAACATATGGA+TGG + chr8_3:59668688-59668707 Msa1298820:intron 40.0%
CAGAGTGATATAAGGTGACT+TGG + chr8_3:59668980-59668999 Msa1298820:intron 40.0%
! AGTGATATAAGGTGACTTGG+TGG + chr8_3:59668983-59669002 Msa1298820:intron 40.0%
!! TATAAGGTGACTTGGTGGTT+TGG + chr8_3:59668988-59669007 Msa1298820:intron 40.0%
!! ATAAGGTGACTTGGTGGTTT+GGG + chr8_3:59668989-59669008 Msa1298820:intron 40.0%
CTAAGACACACATACAACCT+TGG - chr8_3:59669351-59669370 None:intergenic 40.0%
! TAGTCATTGGGTTTTCTTGC+AGG + chr8_3:59669368-59669387 Msa1298820:intron 40.0%
GCAAGGTAAATTAGACGAGA+AGG + chr8_3:59669401-59669420 Msa1298820:CDS 40.0%
AAAAAAGGCTCCAGAGAGAA+CGG + chr8_3:59669460-59669479 Msa1298820:CDS 40.0%
TGGTACTCATGATTCAGTCA+CGG - chr8_3:59669737-59669756 None:intergenic 40.0%
TGGGAGAGATGAAAATGAGG+GGG - chr8_3:59660818-59660837 None:intergenic 45.0%
GCTTGGGAGAGATGAAAATG+AGG - chr8_3:59660821-59660840 None:intergenic 45.0%
ATGAAAATTGGGCTTCGGCT+TGG - chr8_3:59660850-59660869 None:intergenic 45.0%
AAGTAGCTGTTGCTGGTACT+TGG - chr8_3:59660969-59660988 None:intergenic 45.0%
TCAGCTTCTCTCCGATTCTA+GGG + chr8_3:59660992-59661011 Msa1298820:five_prime_UTR 45.0%
AATTACGTCGTCGAGAGTTG+GGG - chr8_3:59661041-59661060 None:intergenic 45.0%
GAATTACGTCGTCGAGAGTT+GGG - chr8_3:59661042-59661061 None:intergenic 45.0%
AGAATTACGTCGTCGAGAGT+TGG - chr8_3:59661043-59661062 None:intergenic 45.0%
! TGATTTTGTCTCTTCGCGAG+AGG + chr8_3:59661486-59661505 Msa1298820:CDS 45.0%
GGACTGAATTAGAGAAAGGG+TGG + chr8_3:59661861-59661880 Msa1298820:intron 45.0%
TGCTCCTAGACATTGTAGTC+AGG + chr8_3:59662150-59662169 Msa1298820:intron 45.0%
CGATCCTGACTACAATGTCT+AGG - chr8_3:59662157-59662176 None:intergenic 45.0%
GTAAAGTCTAAGCACGGTCA+AGG - chr8_3:59662222-59662241 None:intergenic 45.0%
ACCGTGCTTAGACTTTACTC+CGG + chr8_3:59662224-59662243 Msa1298820:intron 45.0%
ACCGGAGTAAAGTCTAAGCA+CGG - chr8_3:59662228-59662247 None:intergenic 45.0%
GGTTCGTAAATAGGATCGGT+AGG - chr8_3:59662411-59662430 None:intergenic 45.0%
! CGTGTTTTACGTTCGTTCAC+CGG + chr8_3:59662444-59662463 Msa1298820:intron 45.0%
ATCGAGATCCTACGTAGGAT+CGG - chr8_3:59662474-59662493 None:intergenic 45.0%
CTCTCTCTCTCAATGTAGTC+AGG - chr8_3:59662497-59662516 None:intergenic 45.0%
AATGCACCATTCATACCTGC+TGG + chr8_3:59662838-59662857 Msa1298820:CDS 45.0%
ATGCACCATTCATACCTGCT+GGG + chr8_3:59662839-59662858 Msa1298820:CDS 45.0%
ACGTACAAACTAACCTGGTG+TGG - chr8_3:59662866-59662885 None:intergenic 45.0%
GCAAGAGATAGCAAAGCTGA+AGG + chr8_3:59663229-59663248 Msa1298820:CDS 45.0%
ATATTCTCTCCTGGGGGAAA+AGG - chr8_3:59663330-59663349 None:intergenic 45.0%
!!! CAACGCTTATTTTGGACTGG+AGG - chr8_3:59663518-59663537 None:intergenic 45.0%
TAAGCTCCGTAAAACATGGC+TGG - chr8_3:59663861-59663880 None:intergenic 45.0%
!! TTGGCTTGAGTTGAGCTTTG+AGG - chr8_3:59664895-59664914 None:intergenic 45.0%
ACTCAAGCCAACATCAATGC+AGG + chr8_3:59664904-59664923 Msa1298820:CDS 45.0%
GGATGATTTCATGCTAGGAC+CGG + chr8_3:59665153-59665172 Msa1298820:intron 45.0%
GAGGGTAGTGAAATCACTAG+AGG + chr8_3:59665397-59665416 Msa1298820:intron 45.0%
ATGTCTTATCCCACCAAGTG+GGG - chr8_3:59665535-59665554 None:intergenic 45.0%
CATGTCTTATCCCACCAAGT+GGG - chr8_3:59665536-59665555 None:intergenic 45.0%
CAAAAGTGGGATAGCGTTAG+TGG - chr8_3:59665761-59665780 None:intergenic 45.0%
! CACTAACGCTATCCCACTTT+TGG + chr8_3:59665759-59665778 Msa1298820:intron 45.0%
!! CTAACGCTATCCCACTTTTG+GGG + chr8_3:59665761-59665780 Msa1298820:intron 45.0%
CATAGACGACCCTCATCAAA+TGG - chr8_3:59666114-59666133 None:intergenic 45.0%
CATTTGATGAGGGTCGTCTA+TGG + chr8_3:59666112-59666131 Msa1298820:intron 45.0%
AACACTCATATGAGCCGTGT+CGG - chr8_3:59666642-59666661 None:intergenic 45.0%
!! GTTATATAGGTGTCGGACAC+CGG + chr8_3:59666659-59666678 Msa1298820:intron 45.0%
TTACTTCGACACTCCTAGAC+CGG - chr8_3:59666681-59666700 None:intergenic 45.0%
! TACGAGTGTCATAGGAGTGT+CGG + chr8_3:59666753-59666772 Msa1298820:intron 45.0%
!! ATAACTTCTAGGTGTTGGGG+TGG + chr8_3:59666958-59666977 Msa1298820:intron 45.0%
CAACTTCCCCATCTTGCTTT+GGG - chr8_3:59667386-59667405 None:intergenic 45.0%
CAAGATGGGGAAGTTGCTAA+TGG + chr8_3:59667390-59667409 Msa1298820:CDS 45.0%
ATTGGGCTTCAAGCTTCTGA+GGG + chr8_3:59667448-59667467 Msa1298820:CDS 45.0%
TGAGAATAGAGGGGTAACCT+TGG + chr8_3:59668022-59668041 Msa1298820:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr8_3:59668064-59668083 Msa1298820:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr8_3:59668065-59668084 Msa1298820:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_3:59668098-59668117 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr8_3:59668132-59668151 Msa1298820:intron 45.0%
CATGTGTGGGTACCTCTAAT+AGG + chr8_3:59668273-59668292 Msa1298820:intron 45.0%
GGATGGTTTGACCAATGATG+TGG + chr8_3:59668705-59668724 Msa1298820:CDS 45.0%
!! TAAGGTGACTTGGTGGTTTG+GGG + chr8_3:59668990-59669009 Msa1298820:intron 45.0%
! TTGCAGGTTTTCATGCTGCA+AGG + chr8_3:59669384-59669403 Msa1298820:intron 45.0%
AAAAAGGCTCCAGAGAGAAC+GGG + chr8_3:59669461-59669480 Msa1298820:CDS 45.0%
AAATGCAGCACGTAATGCCA+GGG + chr8_3:59669489-59669508 Msa1298820:exon 45.0%
AGTATCATCTCGTCAATCCC+TGG - chr8_3:59669509-59669528 None:intergenic 45.0%
TACTCATGATTCAGTCACGG+TGG - chr8_3:59669734-59669753 None:intergenic 45.0%
!!! TATTTTATTTACATAATTTA+GGG - chr8_3:59661755-59661774 None:intergenic 5.0%
!!! TTATTTTATTTACATAATTT+AGG - chr8_3:59661756-59661775 None:intergenic 5.0%
AGTAGGGTGGTCGAGAAGTA+TGG + chr8_3:59660773-59660792 Msa1298820:five_prime_UTR 50.0%
GTTGCTGGTACTTGGAGTAG+AGG - chr8_3:59660961-59660980 None:intergenic 50.0%
CTGAGTGAAGTAGCTGTTGC+TGG - chr8_3:59660976-59660995 None:intergenic 50.0%
CTCAGCTTCTCTCCGATTCT+AGG + chr8_3:59660991-59661010 Msa1298820:five_prime_UTR 50.0%
CGATTTACCGGAACACGTTC+AGG + chr8_3:59661155-59661174 Msa1298820:CDS 50.0%
GCTGAAGTAGAAGCTGCTTC+TGG + chr8_3:59661449-59661468 Msa1298820:CDS 50.0%
!! GCTGCTTCTGGTGTTACAAC+CGG + chr8_3:59661461-59661480 Msa1298820:CDS 50.0%
! GGAAACGCTTGATTCGTGCT+TGG + chr8_3:59661625-59661644 Msa1298820:CDS 50.0%
! AAGCACGGTCAAGGTGCTTT+AGG - chr8_3:59662213-59662232 None:intergenic 50.0%
GAAACAGGGCAAAGACGAAC+CGG - chr8_3:59662246-59662265 None:intergenic 50.0%
AGATCCTACGTAGGATCGGT+CGG - chr8_3:59662470-59662489 None:intergenic 50.0%
TCAGGATCGAGATCCTACGT+AGG - chr8_3:59662479-59662498 None:intergenic 50.0%
! AGTAGAGTCCTTAGCGGATC+AGG + chr8_3:59663049-59663068 Msa1298820:CDS 50.0%
ATTGAATGCACACTACGCCG+AGG - chr8_3:59663799-59663818 None:intergenic 50.0%
TGGGATGACCAGCGAAATGA+CGG - chr8_3:59664483-59664502 None:intergenic 50.0%
CTGTATGGAGTCCAAGAGTC+AGG + chr8_3:59664603-59664622 Msa1298820:intron 50.0%
AGATGGTAGGAACTCGGCTT+AGG + chr8_3:59665315-59665334 Msa1298820:intron 50.0%
GAACTCGGCTTAGGTGGTTT+GGG + chr8_3:59665324-59665343 Msa1298820:intron 50.0%
ATTGAGGAGAGTAGATCCGG+TGG + chr8_3:59665375-59665394 Msa1298820:intron 50.0%
GTGATTTCACTACCCTCCAC+CGG - chr8_3:59665394-59665413 None:intergenic 50.0%
TGGCTCCATGGATCAAACGA+TGG - chr8_3:59665511-59665530 None:intergenic 50.0%
CCATGTCTTATCCCACCAAG+TGG - chr8_3:59665537-59665556 None:intergenic 50.0%
! CCACTTGGTGGGATAAGACA+TGG + chr8_3:59665534-59665553 Msa1298820:intron 50.0%
ACGTGTCGTACGAGTGTCAT+AGG + chr8_3:59666745-59666764 Msa1298820:intron 50.0%
TGCGACACTCTTAGTCCTAG+AGG + chr8_3:59666780-59666799 Msa1298820:intron 50.0%
TATGAAGCACGGACACCTCT+AGG - chr8_3:59666798-59666817 None:intergenic 50.0%
! CGGAGGGAGTACATTAGAGA+AGG + chr8_3:59666829-59666848 Msa1298820:intron 50.0%
GCAACTTCCCCATCTTGCTT+TGG - chr8_3:59667387-59667406 None:intergenic 50.0%
GATTGGGCTTCAAGCTTCTG+AGG + chr8_3:59667447-59667466 Msa1298820:CDS 50.0%
! GCTTCAAGCTTCTGAGGGAA+AGG + chr8_3:59667453-59667472 Msa1298820:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8_3:59668042-59668061 None:intergenic 50.0%
!! AAGGTGACTTGGTGGTTTGG+GGG + chr8_3:59668991-59669010 Msa1298820:intron 50.0%
ATGGGTTCAACTTACCCCTC+TGG + chr8_3:59669045-59669064 Msa1298820:intron 50.0%
ACAAAGCTTAGGGGCAGCAT+TGG - chr8_3:59669138-59669157 None:intergenic 50.0%
ATTTGCTCTCCCGTTCTCTC+TGG - chr8_3:59669473-59669492 None:intergenic 50.0%
CAAATGCAGCACGTAATGCC+AGG + chr8_3:59669488-59669507 Msa1298820:exon 50.0%
ATTCAGTCACGGTGGCGTAT+GGG - chr8_3:59669726-59669745 None:intergenic 50.0%
! AGGGTGGTCGAGAAGTATGG+TGG + chr8_3:59660776-59660795 Msa1298820:five_prime_UTR 55.0%
! GGGTGGTCGAGAAGTATGGT+GGG + chr8_3:59660777-59660796 Msa1298820:five_prime_UTR 55.0%
!! TTCGGCTTGGTCTTGGGCTT+GGG - chr8_3:59660837-59660856 None:intergenic 55.0%
!! TTGGGCTTCGGCTTGGTCTT+GGG - chr8_3:59660843-59660862 None:intergenic 55.0%
!! ATTGGGCTTCGGCTTGGTCT+TGG - chr8_3:59660844-59660863 None:intergenic 55.0%
TGGGGAAGACATGGTGAAGC+TGG - chr8_3:59661023-59661042 None:intergenic 55.0%
GTCGAGAGTTGGGGAAGACA+TGG - chr8_3:59661032-59661051 None:intergenic 55.0%
!! AGGATCGAGTGCTGACTCGT+AGG + chr8_3:59662170-59662189 Msa1298820:intron 55.0%
GTGGTCCCAGCAGGTATGAA+TGG - chr8_3:59662847-59662866 None:intergenic 55.0%
TGGCTGAACCTGATCCGCTA+AGG - chr8_3:59663060-59663079 None:intergenic 55.0%
TAACGTGCCCGTCATTTCGC+TGG + chr8_3:59664472-59664491 Msa1298820:intron 55.0%
GGGATGACCAGCGAAATGAC+GGG - chr8_3:59664482-59664501 None:intergenic 55.0%
TAGGACCGGTGATGTTGCGT+GGG + chr8_3:59665167-59665186 Msa1298820:intron 55.0%
TGGTAGGAACTCGGCTTAGG+TGG + chr8_3:59665318-59665337 Msa1298820:intron 55.0%
GGAACTCGGCTTAGGTGGTT+TGG + chr8_3:59665323-59665342 Msa1298820:intron 55.0%
AGGAGAGTAGATCCGGTGGA+GGG + chr8_3:59665379-59665398 Msa1298820:intron 55.0%
CTTATCCCACCAAGTGGGGT+TGG - chr8_3:59665531-59665550 None:intergenic 55.0%
GGTAGTCAAATCCCGGACAG+CGG - chr8_3:59665791-59665810 None:intergenic 55.0%
GACACTCGTACGACACGTGT+CGG - chr8_3:59666743-59666762 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr8_3:59668077-59668096 Msa1298820:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr8_3:59668172-59668191 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr8_3:59668173-59668192 None:intergenic 55.0%
GATTCAGTCACGGTGGCGTA+TGG - chr8_3:59669727-59669746 None:intergenic 55.0%
!! CTTCGGCTTGGTCTTGGGCT+TGG - chr8_3:59660838-59660857 None:intergenic 60.0%
ATACCTGCTGGGACCACACC+AGG + chr8_3:59662850-59662869 Msa1298820:CDS 60.0%
TAACCTGGTGTGGTCCCAGC+AGG - chr8_3:59662856-59662875 None:intergenic 60.0%
CTAGGACCGGTGATGTTGCG+TGG + chr8_3:59665166-59665185 Msa1298820:intron 60.0%
ACCGGTGATGTTGCGTGGGA+CGG + chr8_3:59665171-59665190 Msa1298820:intron 60.0%
GAGGAGAGTAGATCCGGTGG+AGG + chr8_3:59665378-59665397 Msa1298820:intron 60.0%
TCCATGGAGCCAACCCCACT+TGG + chr8_3:59665519-59665538 Msa1298820:intron 60.0%
!! ACCAAGTGGGGTTGGCTCCA+TGG - chr8_3:59665523-59665542 None:intergenic 60.0%
ATGGAGCCAACCCCACTTGG+TGG + chr8_3:59665522-59665541 Msa1298820:intron 60.0%
TGGAGCCAACCCCACTTGGT+GGG + chr8_3:59665523-59665542 Msa1298820:intron 60.0%
!!! CGCTATCCCACTTTTGGGGC+CGG + chr8_3:59665765-59665784 Msa1298820:intron 60.0%
!! TAGGTGTCGGACACCGGTCT+AGG + chr8_3:59666665-59666684 Msa1298820:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8_3:59668031-59668050 Msa1298820:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8_3:59668145-59668164 Msa1298820:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr8_3:59668160-59668179 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr8_3:59668161-59668180 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr8_3:59668160-59668179 Msa1298820:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr8_3:59668161-59668180 Msa1298820:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr8_3:59668177-59668196 Msa1298820:intron 60.0%
!! GTGACTTGGTGGTTTGGGGG+AGG + chr8_3:59668994-59669013 Msa1298820:intron 60.0%
CCTACGTAGGATCGGTCGGC+CGG - chr8_3:59662466-59662485 None:intergenic 65.0%
CCCGTCCCACGCAACATCAC+CGG - chr8_3:59665175-59665194 None:intergenic 65.0%
CCGGTGATGTTGCGTGGGAC+GGG + chr8_3:59665172-59665191 Msa1298820:intron 65.0%
CGGTGATGTTGCGTGGGACG+GGG + chr8_3:59665173-59665192 Msa1298820:intron 65.0%
GATGTTGCGTGGGACGGGGA+CGG + chr8_3:59665177-59665196 Msa1298820:intron 65.0%
! TGGGACGGGGACGGAGTGTT+GGG + chr8_3:59665186-59665205 Msa1298820:intron 65.0%
GTCAAATCCCGGACAGCGGC+CGG - chr8_3:59665787-59665806 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8_3:59668147-59668166 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr8_3:59668162-59668181 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr8_3:59668166-59668185 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr8_3:59668167-59668186 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr8_3:59668178-59668197 Msa1298820:intron 65.0%
CAGTCACGGTGGCGTATGGG+TGG - chr8_3:59669723-59669742 None:intergenic 65.0%
CCGGCCGACCGATCCTACGT+AGG + chr8_3:59662463-59662482 Msa1298820:intron 70.0%
GTGGGACGGGGACGGAGTGT+TGG + chr8_3:59665185-59665204 Msa1298820:intron 70.0%
!! GGGACGGGGACGGAGTGTTG+GGG + chr8_3:59665187-59665206 Msa1298820:intron 70.0%
!! GGACGGGGACGGAGTGTTGG+GGG + chr8_3:59665188-59665207 Msa1298820:intron 70.0%
!! GACGGGGACGGAGTGTTGGG+GGG + chr8_3:59665189-59665208 Msa1298820:intron 70.0%
!! ACGGGGACGGAGTGTTGGGG+GGG + chr8_3:59665190-59665209 Msa1298820:intron 70.0%
CAGCGGCCGGCCCCAAAAGT+GGG - chr8_3:59665774-59665793 None:intergenic 70.0%
ACAGCGGCCGGCCCCAAAAG+TGG - chr8_3:59665775-59665794 None:intergenic 70.0%
!!! TTTTGGGGCCGGCCGCTGTC+CGG + chr8_3:59665776-59665795 Msa1298820:intron 70.0%
!! CGGGGACGGAGTGTTGGGGG+GGG + chr8_3:59665191-59665210 Msa1298820:intron 75.0%
!! GGGGACGGAGTGTTGGGGGG+GGG + chr8_3:59665192-59665211 Msa1298820:intron 75.0%
!! GGGACGGAGTGTTGGGGGGG+GGG + chr8_3:59665193-59665212 Msa1298820:intron 75.0%
!! GGACGGAGTGTTGGGGGGGG+GGG + chr8_3:59665194-59665213 Msa1298820:intron 75.0%
!! GACGGAGTGTTGGGGGGGGG+GGG + chr8_3:59665195-59665214 Msa1298820:intron 75.0%
!! ACGGAGTGTTGGGGGGGGGG+GGG + chr8_3:59665196-59665215 Msa1298820:intron 75.0%
! TTTGGGGCCGGCCGCTGTCC+GGG + chr8_3:59665777-59665796 Msa1298820:intron 75.0%
!!! CGGAGTGTTGGGGGGGGGGG+GGG + chr8_3:59665197-59665216 Msa1298820:intron 80.0%
!!! GGAGTGTTGGGGGGGGGGGG+GGG + chr8_3:59665198-59665217 Msa1298820:intron 80.0%
!!! GAGTGTTGGGGGGGGGGGGG+GGG + chr8_3:59665199-59665218 Msa1298820:intron 80.0%
!! AGTGTTGGGGGGGGGGGGGG+GGG + chr8_3:59665200-59665219 Msa1298820:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 59660760 59669810 59660760 ID=Msa1298820;Name=Msa1298820
chr8_3 mRNA 59660760 59669810 59660760 ID=Msa1298820-mRNA-1;Parent=Msa1298820;Name=Msa1298820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=271|1|1|1|1|1|14|307|327
chr8_3 exon 59660760 59661054 59660760 ID=Msa1298820-mRNA-1:exon:17289;Parent=Msa1298820-mRNA-1
chr8_3 exon 59661134 59661176 59661134 ID=Msa1298820-mRNA-1:exon:17290;Parent=Msa1298820-mRNA-1
chr8_3 exon 59661267 59661340 59661267 ID=Msa1298820-mRNA-1:exon:17291;Parent=Msa1298820-mRNA-1
chr8_3 exon 59661437 59661507 59661437 ID=Msa1298820-mRNA-1:exon:17292;Parent=Msa1298820-mRNA-1
chr8_3 exon 59661610 59661646 59661610 ID=Msa1298820-mRNA-1:exon:17293;Parent=Msa1298820-mRNA-1
chr8_3 exon 59662784 59662871 59662784 ID=Msa1298820-mRNA-1:exon:17294;Parent=Msa1298820-mRNA-1
chr8_3 exon 59663006 59663070 59663006 ID=Msa1298820-mRNA-1:exon:17295;Parent=Msa1298820-mRNA-1
chr8_3 exon 59663173 59663250 59663173 ID=Msa1298820-mRNA-1:exon:17296;Parent=Msa1298820-mRNA-1
chr8_3 exon 59664878 59664925 59664878 ID=Msa1298820-mRNA-1:exon:17297;Parent=Msa1298820-mRNA-1
chr8_3 exon 59665877 59665930 59665877 ID=Msa1298820-mRNA-1:exon:17298;Parent=Msa1298820-mRNA-1
chr8_3 exon 59667313 59667474 59667313 ID=Msa1298820-mRNA-1:exon:17299;Parent=Msa1298820-mRNA-1
chr8_3 exon 59667782 59667851 59667782 ID=Msa1298820-mRNA-1:exon:17300;Parent=Msa1298820-mRNA-1
chr8_3 exon 59668689 59668744 59668689 ID=Msa1298820-mRNA-1:exon:17301;Parent=Msa1298820-mRNA-1
chr8_3 exon 59669390 59669810 59669390 ID=Msa1298820-mRNA-1:exon:17302;Parent=Msa1298820-mRNA-1
chr8_3 five_prime_UTR 59660760 59661030 59660760 ID=Msa1298820-mRNA-1:five_prime_utr;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59661031 59661054 59661031 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59661134 59661176 59661134 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59661267 59661340 59661267 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59661437 59661507 59661437 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59661610 59661646 59661610 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59662784 59662871 59662784 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59663006 59663070 59663006 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59663173 59663250 59663173 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59664878 59664925 59664878 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59665877 59665930 59665877 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59667313 59667474 59667313 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59667782 59667851 59667782 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59668689 59668744 59668689 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 CDS 59669390 59669503 59669390 ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1
chr8_3 three_prime_UTR 59669504 59669810 59669504 ID=Msa1298820-mRNA-1:three_prime_utr;Parent=Msa1298820-mRNA-1
Gene Sequence

>Msa1298820

ATGTCTTCCCCAACTCTCGACGACCAGGAATTTGATTTCGGAGAACGATTTACCGGAACACGTTCAGATACTGTAAGTCATAAGAGGTCTTCTGCTGAATTTGATGATGGAAATTTTGATAATGATCCTTACGGAAAGAAGGCCAAAACGACAGCTGAAGTAGAAGCTGCTTCTGGTGTTACAACCGGAATGATTTTGTCTCTTCGCGAGAGTCTTCAAGACTGTAAGGAAACGCTTGATTCGTGCTTGAATGAACTTGAGGATGCACAATACGAGATTCAGAATTGGCGCTCTGCATTTCAAAATGCACCATTCATACCTGCTGGGACCACACCAGTACCCAAATTGGTGATTAATTACCTTCAAGCACTGAAATCATCAGTAGAGTCCTTAGCGGATCAGCTTGAAAAGGCAAAGAAAAAGGAAGTTGCATTCATTGTGACATTTGCTAAACGTGAGCAAGAGATAGCAAAGCTGAAGTCTGCTGTACGGGACCTCAAAGCTCAACTCAAGCCAACATCAATGCAGGCAAGAAGGTTCTTATTAGATCCAGTAATCCATGAAGAGTTTACGCGGTTAAAGAATTTAGTTGCGGAAAAGGACACAAGACTAAAGGAGTTGCAAGATCAAATGTCTGCTGTAAAATTTACTTCCCAAAGCAAGATGGGGAAGTTGCTAATGGCTAAATGTAAAACTCTGCAAGAGGAAAATGAAGAGATTGGGCTTCAAGCTTCTGAGGGAAAGATGCATGAATTAGCAATGAAACTTTCATTGCAGAAAGATCAGAATTCAGAGCTCAGAAATCAATTTGAAGAGTTGCAGAAACATATGGATGGTTTGACCAATGATGTGGAAAGATCAAATGAAACGGTTTTCATGCTGCAAGGTAAATTAGACGAGAAGGATTTAGAGATTGAAAGACTGAAAGATGAGTTGCAACAAAAAAGGCTCCAGAGAGAACGGGAGAGCAAATGCAGCACGTAA

Protein sequence

>Msa1298820

MSSPTLDDQEFDFGERFTGTRSDTVSHKRSSAEFDDGNFDNDPYGKKAKTTAEVEAASGVTTGMILSLRESLQDCKETLDSCLNELEDAQYEIQNWRSAFQNAPFIPAGTTPVPKLVINYLQALKSSVESLADQLEKAKKKEVAFIVTFAKREQEIAKLKSAVRDLKAQLKPTSMQARRFLLDPVIHEEFTRLKNLVAEKDTRLKELQDQMSAVKFTSQSKMGKLLMAKCKTLQEENEEIGLQASEGKMHELAMKLSLQKDQNSELRNQFEELQKHMDGLTNDVERSNETVFMLQGKLDEKDLEIERLKDELQQKRLQRERESKCST*