Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298820 | XP_024630105.1 | 98.142 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298820 | sp|Q9ZSZ8|FIP37_ARATH | 62.500 | 288 | 98 | 4 | 9 | 295 | 6 | 284 | 2.97e-119 | 349 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298820 | A0A396ID20 | 98.142 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 0.0 | 649 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012080 | Msa1298820 | 0.826232 | 3.037435e-54 | -8.615850e-47 |
Msa0017510 | Msa1298820 | 0.817490 | 3.209567e-52 | -8.615850e-47 |
Msa0028420 | Msa1298820 | 0.829966 | 3.829978e-55 | -8.615850e-47 |
Msa0028640 | Msa1298820 | 0.816849 | 4.473245e-52 | -8.615850e-47 |
Msa0029270 | Msa1298820 | 0.815618 | 8.430310e-52 | -8.615850e-47 |
Msa0032090 | Msa1298820 | 0.851349 | 9.401858e-61 | -8.615850e-47 |
Msa0032430 | Msa1298820 | 0.852324 | 4.975014e-61 | -8.615850e-47 |
Msa0034270 | Msa1298820 | 0.820860 | 5.486280e-53 | -8.615850e-47 |
Msa0034870 | Msa1298820 | 0.808615 | 2.838849e-50 | -8.615850e-47 |
Msa0040450 | Msa1298820 | 0.800216 | 1.599222e-48 | -8.615850e-47 |
Msa0047030 | Msa1298820 | 0.807662 | 4.529749e-50 | -8.615850e-47 |
Msa0047050 | Msa1298820 | 0.811752 | 5.982850e-51 | -8.615850e-47 |
Msa0047070 | Msa1298820 | 0.828500 | 8.686522e-55 | -8.615850e-47 |
Msa0054480 | Msa1298820 | 0.829343 | 5.427130e-55 | -8.615850e-47 |
Msa0061290 | Msa1298820 | 0.841679 | 4.105846e-58 | -8.615850e-47 |
Msa0079380 | Msa1298820 | 0.853429 | 2.404043e-61 | -8.615850e-47 |
Msa0081090 | Msa1298820 | 0.816299 | 5.941308e-52 | -8.615850e-47 |
Msa0089630 | Msa1298820 | 0.822166 | 2.740029e-53 | -8.615850e-47 |
Msa0094120 | Msa1298820 | 0.817564 | 3.089171e-52 | -8.615850e-47 |
Msa0094140 | Msa1298820 | 0.822035 | 2.938507e-53 | -8.615850e-47 |
Msa0110970 | Msa1298820 | 0.812351 | 4.429686e-51 | -8.615850e-47 |
Msa0115080 | Msa1298820 | 0.831044 | 2.086471e-55 | -8.615850e-47 |
Msa0615590 | Msa1298820 | 0.804337 | 2.267720e-49 | -8.615850e-47 |
Msa0616160 | Msa1298820 | 0.806079 | 9.789906e-50 | -8.615850e-47 |
Msa0616220 | Msa1298820 | 0.829845 | 4.098308e-55 | -8.615850e-47 |
Msa0625720 | Msa1298820 | 0.841591 | 4.330913e-58 | -8.615850e-47 |
Msa0639430 | Msa1298820 | 0.820127 | 8.083627e-53 | -8.615850e-47 |
Msa0649940 | Msa1298820 | 0.803493 | 3.395180e-49 | -8.615850e-47 |
Msa0650020 | Msa1298820 | 0.814905 | 1.213927e-51 | -8.615850e-47 |
Msa0657970 | Msa1298820 | 0.800875 | 1.173800e-48 | -8.615850e-47 |
Msa0661650 | Msa1298820 | 0.828311 | 9.644608e-55 | -8.615850e-47 |
Msa0661790 | Msa1298820 | 0.810027 | 1.413438e-50 | -8.615850e-47 |
Msa0663390 | Msa1298820 | 0.836548 | 8.774333e-57 | -8.615850e-47 |
Msa0682330 | Msa1298820 | 0.825636 | 4.206986e-54 | -8.615850e-47 |
Msa0683510 | Msa1298820 | 0.800806 | 1.212376e-48 | -8.615850e-47 |
Msa0683570 | Msa1298820 | 0.812851 | 3.443451e-51 | -8.615850e-47 |
Msa0691980 | Msa1298820 | 0.828843 | 7.177267e-55 | -8.615850e-47 |
Msa0699550 | Msa1298820 | 0.825068 | 5.732570e-54 | -8.615850e-47 |
Msa0708520 | Msa1298820 | 0.809997 | 1.434958e-50 | -8.615850e-47 |
Msa0727710 | Msa1298820 | 0.801948 | 7.075310e-49 | -8.615850e-47 |
Msa0730430 | Msa1298820 | 0.817399 | 3.364490e-52 | -8.615850e-47 |
Msa0737560 | Msa1298820 | 0.804725 | 1.882176e-49 | -8.615850e-47 |
Msa0737570 | Msa1298820 | 0.800177 | 1.628688e-48 | -8.615850e-47 |
Msa0754520 | Msa1298820 | 0.810937 | 8.989625e-51 | -8.615850e-47 |
Msa0763830 | Msa1298820 | 0.804394 | 2.206421e-49 | -8.615850e-47 |
Msa0770720 | Msa1298820 | 0.838025 | 3.673710e-57 | -8.615850e-47 |
Msa0778590 | Msa1298820 | 0.811255 | 7.670222e-51 | -8.615850e-47 |
Msa0789980 | Msa1298820 | 0.813403 | 2.605559e-51 | -8.615850e-47 |
Msa0795560 | Msa1298820 | 0.800134 | 1.661681e-48 | -8.615850e-47 |
Msa0796530 | Msa1298820 | 0.820706 | 5.952769e-53 | -8.615850e-47 |
Msa0828560 | Msa1298820 | 0.809939 | 1.476623e-50 | -8.615850e-47 |
Msa0833220 | Msa1298820 | 0.807292 | 5.427281e-50 | -8.615850e-47 |
Msa0124060 | Msa1298820 | 0.842516 | 2.466140e-58 | -8.615850e-47 |
Msa0127050 | Msa1298820 | 0.810364 | 1.195601e-50 | -8.615850e-47 |
Msa0136070 | Msa1298820 | 0.819797 | 9.616467e-53 | -8.615850e-47 |
Msa0136100 | Msa1298820 | 0.800450 | 1.433271e-48 | -8.615850e-47 |
Msa0152350 | Msa1298820 | 0.827043 | 1.944961e-54 | -8.615850e-47 |
Msa0152430 | Msa1298820 | 0.800807 | 1.212045e-48 | -8.615850e-47 |
Msa0157290 | Msa1298820 | 0.817331 | 3.484812e-52 | -8.615850e-47 |
Msa0168500 | Msa1298820 | 0.843106 | 1.717784e-58 | -8.615850e-47 |
Msa0172070 | Msa1298820 | 0.853204 | 2.789212e-61 | -8.615850e-47 |
Msa0189010 | Msa1298820 | 0.810399 | 1.175200e-50 | -8.615850e-47 |
Msa0211150 | Msa1298820 | 0.802740 | 4.860129e-49 | -8.615850e-47 |
Msa0223690 | Msa1298820 | 0.800160 | 1.641614e-48 | -8.615850e-47 |
Msa0225680 | Msa1298820 | 0.815517 | 8.879652e-52 | -8.615850e-47 |
Msa0225740 | Msa1298820 | 0.816131 | 6.478724e-52 | -8.615850e-47 |
Msa0225760 | Msa1298820 | 0.822615 | 2.154768e-53 | -8.615850e-47 |
Msa1229500 | Msa1298820 | 0.839873 | 1.221448e-57 | -8.615850e-47 |
Msa1252190 | Msa1298820 | 0.812993 | 3.205943e-51 | -8.615850e-47 |
Msa1269480 | Msa1298820 | 0.802681 | 4.998826e-49 | -8.615850e-47 |
Msa1271990 | Msa1298820 | 0.823136 | 1.629622e-53 | -8.615850e-47 |
Msa1280420 | Msa1298820 | 0.806083 | 9.769881e-50 | -8.615850e-47 |
Msa1287460 | Msa1298820 | 0.812529 | 4.049126e-51 | -8.615850e-47 |
Msa1297230 | Msa1298820 | 0.809155 | 2.176233e-50 | -8.615850e-47 |
Msa1298820 | Msa1302830 | 0.821731 | 3.454735e-53 | -8.615850e-47 |
Msa1298820 | Msa1309030 | 0.804028 | 2.629151e-49 | -8.615850e-47 |
Msa1298820 | Msa1309790 | 0.800512 | 1.392286e-48 | -8.615850e-47 |
Msa1298820 | Msa1328710 | 0.801153 | 1.029755e-48 | -8.615850e-47 |
Msa1298820 | Msa1330410 | 0.885854 | 5.677381e-72 | -8.615850e-47 |
Msa1298820 | Msa1336110 | 0.802593 | 5.212612e-49 | -8.615850e-47 |
Msa1298820 | Msa1366600 | 0.825381 | 4.836296e-54 | -8.615850e-47 |
Msa1298820 | Msa1370010 | 0.835822 | 1.341204e-56 | -8.615850e-47 |
Msa1298820 | Msa1370720 | 0.820330 | 7.261885e-53 | -8.615850e-47 |
Msa1298820 | Msa1372230 | 0.807115 | 5.917763e-50 | -8.615850e-47 |
Msa1298820 | Msa1375560 | 0.807016 | 6.210488e-50 | -8.615850e-47 |
Msa1298820 | Msa1381610 | 0.803578 | 3.261007e-49 | -8.615850e-47 |
Msa1298820 | Msa1391770 | 0.810534 | 1.098924e-50 | -8.615850e-47 |
Msa1298820 | Msa1392240 | 0.818018 | 2.439726e-52 | -8.615850e-47 |
Msa1298820 | Msa1417420 | 0.828149 | 1.055244e-54 | -8.615850e-47 |
Msa1298820 | Msa1419370 | 0.801396 | 9.182860e-49 | -8.615850e-47 |
Msa1298820 | Msa1423350 | 0.816940 | 4.266607e-52 | -8.615850e-47 |
Msa1298820 | Msa1424750 | 0.801320 | 9.518787e-49 | -8.615850e-47 |
Msa1298820 | Msa1425880 | 0.800122 | 1.671509e-48 | -8.615850e-47 |
Msa1298820 | Msa1440560 | 0.819807 | 9.568640e-53 | -8.615850e-47 |
Msa1298820 | Msa1441580 | 0.804376 | 2.225102e-49 | -8.615850e-47 |
Msa1298820 | Msa1443760 | 0.820097 | 8.210516e-53 | -8.615850e-47 |
Msa1298820 | Msa1451160 | 0.806019 | 1.008056e-49 | -8.615850e-47 |
Msa1298820 | Msa1459380 | 0.804953 | 1.686679e-49 | -8.615850e-47 |
Msa1298820 | Msa1459690 | 0.808160 | 3.550210e-50 | -8.615850e-47 |
Msa1298820 | Msa1460020 | 0.814401 | 1.570179e-51 | -8.615850e-47 |
Msa1298820 | Msa1464810 | 0.832140 | 1.120583e-55 | -8.615850e-47 |
Msa0376350 | Msa1298820 | 0.819465 | 1.144964e-52 | -8.615850e-47 |
Msa0378720 | Msa1298820 | 0.808456 | 3.069876e-50 | -8.615850e-47 |
Msa0379770 | Msa1298820 | 0.801088 | 1.062008e-48 | -8.615850e-47 |
Msa0402650 | Msa1298820 | 0.832841 | 7.508620e-56 | -8.615850e-47 |
Msa0408400 | Msa1298820 | 0.800196 | 1.614339e-48 | -8.615850e-47 |
Msa0410500 | Msa1298820 | 0.804909 | 1.722535e-49 | -8.615850e-47 |
Msa0410650 | Msa1298820 | 0.819589 | 1.073082e-52 | -8.615850e-47 |
Msa0417880 | Msa1298820 | 0.809549 | 1.791081e-50 | -8.615850e-47 |
Msa0424790 | Msa1298820 | 0.828627 | 8.094107e-55 | -8.615850e-47 |
Msa0428080 | Msa1298820 | 0.832976 | 6.951275e-56 | -8.615850e-47 |
Msa0428150 | Msa1298820 | 0.812674 | 3.764777e-51 | -8.615850e-47 |
Msa0440440 | Msa1298820 | 0.808312 | 3.294400e-50 | -8.615850e-47 |
Msa0449210 | Msa1298820 | 0.805436 | 1.336480e-49 | -8.615850e-47 |
Msa0462500 | Msa1298820 | 0.806427 | 8.270892e-50 | -8.615850e-47 |
Msa0464680 | Msa1298820 | 0.824706 | 6.980164e-54 | -8.615850e-47 |
Msa0465410 | Msa1298820 | 0.818966 | 1.487163e-52 | -8.615850e-47 |
Msa0467490 | Msa1298820 | 0.847253 | 1.299606e-59 | -8.615850e-47 |
Msa0475790 | Msa1298820 | 0.801012 | 1.100594e-48 | -8.615850e-47 |
Msa0479170 | Msa1298820 | 0.822587 | 2.186716e-53 | -8.615850e-47 |
Msa0481530 | Msa1298820 | 0.827695 | 1.357490e-54 | -8.615850e-47 |
Msa0979730 | Msa1298820 | 0.808312 | 3.294400e-50 | -8.615850e-47 |
Msa0994950 | Msa1298820 | 0.804213 | 2.405840e-49 | -8.615850e-47 |
Msa1003750 | Msa1298820 | 0.807469 | 4.978088e-50 | -8.615850e-47 |
Msa1013400 | Msa1298820 | 0.800822 | 1.203440e-48 | -8.615850e-47 |
Msa1018980 | Msa1298820 | 0.805857 | 1.090053e-49 | -8.615850e-47 |
Msa1019000 | Msa1298820 | 0.803461 | 3.448561e-49 | -8.615850e-47 |
Msa1029250 | Msa1298820 | 0.830081 | 3.588876e-55 | -8.615850e-47 |
Msa1045140 | Msa1298820 | 0.815229 | 1.028635e-51 | -8.615850e-47 |
Msa1082500 | Msa1298820 | 0.805860 | 1.088324e-49 | -8.615850e-47 |
Msa1084960 | Msa1298820 | 0.818515 | 1.882464e-52 | -8.615850e-47 |
Msa1085200 | Msa1298820 | 0.814375 | 1.590442e-51 | -8.615850e-47 |
Msa1100050 | Msa1298820 | 0.800483 | 1.411004e-48 | -8.615850e-47 |
Msa1104370 | Msa1298820 | 0.807253 | 5.532052e-50 | -8.615850e-47 |
Msa1106700 | Msa1298820 | 0.812931 | 3.307329e-51 | -8.615850e-47 |
Msa0243100 | Msa1298820 | 0.802251 | 6.130789e-49 | -8.615850e-47 |
Msa0255090 | Msa1298820 | 0.804098 | 2.542552e-49 | -8.615850e-47 |
Msa0259380 | Msa1298820 | 0.806676 | 7.327318e-50 | -8.615850e-47 |
Msa0260610 | Msa1298820 | 0.823587 | 1.278103e-53 | -8.615850e-47 |
Msa0260670 | Msa1298820 | 0.820245 | 7.596611e-53 | -8.615850e-47 |
Msa0261340 | Msa1298820 | 0.832095 | 1.149634e-55 | -8.615850e-47 |
Msa0283520 | Msa1298820 | 0.802976 | 4.343514e-49 | -8.615850e-47 |
Msa0292400 | Msa1298820 | 0.844532 | 7.131896e-59 | -8.615850e-47 |
Msa0309770 | Msa1298820 | 0.821016 | 5.052523e-53 | -8.615850e-47 |
Msa0332000 | Msa1298820 | 0.800385 | 1.477782e-48 | -8.615850e-47 |
Msa0337620 | Msa1298820 | 0.826793 | 2.232237e-54 | -8.615850e-47 |
Msa0339480 | Msa1298820 | 0.807673 | 4.506976e-50 | -8.615850e-47 |
Msa0358890 | Msa1298820 | 0.813234 | 2.837802e-51 | -8.615850e-47 |
Msa0363200 | Msa1298820 | 0.802652 | 5.067733e-49 | -8.615850e-47 |
Msa1108160 | Msa1298820 | 0.810528 | 1.102371e-50 | -8.615850e-47 |
Msa1111110 | Msa1298820 | 0.811519 | 6.723178e-51 | -8.615850e-47 |
Msa1111130 | Msa1298820 | 0.827041 | 1.947561e-54 | -8.615850e-47 |
Msa1113340 | Msa1298820 | 0.800197 | 1.613387e-48 | -8.615850e-47 |
Msa1147710 | Msa1298820 | 0.802134 | 6.479766e-49 | -8.615850e-47 |
Msa1154710 | Msa1298820 | 0.807164 | 5.776750e-50 | -8.615850e-47 |
Msa1171710 | Msa1298820 | 0.843591 | 1.275359e-58 | -8.615850e-47 |
Msa1182860 | Msa1298820 | 0.833165 | 6.238192e-56 | -8.615850e-47 |
Msa1183120 | Msa1298820 | 0.801620 | 8.261728e-49 | -8.615850e-47 |
Msa1192090 | Msa1298820 | 0.811728 | 6.056368e-51 | -8.615850e-47 |
Msa1209460 | Msa1298820 | 0.877172 | 7.776875e-69 | -8.615850e-47 |
Msa1222850 | Msa1298820 | 0.820599 | 6.300521e-53 | -8.615850e-47 |
Msa0488560 | Msa1298820 | 0.818674 | 1.732674e-52 | -8.615850e-47 |
Msa0498060 | Msa1298820 | 0.828325 | 9.573945e-55 | -8.615850e-47 |
Msa0501460 | Msa1298820 | 0.832852 | 7.460087e-56 | -8.615850e-47 |
Msa0507680 | Msa1298820 | 0.821819 | 3.296231e-53 | -8.615850e-47 |
Msa0511270 | Msa1298820 | 0.825324 | 4.986979e-54 | -8.615850e-47 |
Msa0511370 | Msa1298820 | 0.835005 | 2.158136e-56 | -8.615850e-47 |
Msa0516170 | Msa1298820 | 0.809111 | 2.223958e-50 | -8.615850e-47 |
Msa0529890 | Msa1298820 | 0.838215 | 3.281898e-57 | -8.615850e-47 |
Msa0532070 | Msa1298820 | 0.855733 | 5.176256e-62 | -8.615850e-47 |
Msa0546680 | Msa1298820 | 0.823421 | 1.397746e-53 | -8.615850e-47 |
Msa0557070 | Msa1298820 | 0.832049 | 1.179946e-55 | -8.615850e-47 |
Msa0569200 | Msa1298820 | 0.834742 | 2.514008e-56 | -8.615850e-47 |
Msa0585560 | Msa1298820 | 0.837623 | 4.658959e-57 | -8.615850e-47 |
Msa0856910 | Msa1298820 | 0.804752 | 1.858056e-49 | -8.615850e-47 |
Msa0856920 | Msa1298820 | 0.807162 | 5.782549e-50 | -8.615850e-47 |
Msa0861600 | Msa1298820 | 0.806510 | 7.943644e-50 | -8.615850e-47 |
Msa0866520 | Msa1298820 | 0.811509 | 6.755223e-51 | -8.615850e-47 |
Msa0867480 | Msa1298820 | 0.804987 | 1.658716e-49 | -8.615850e-47 |
Msa0869780 | Msa1298820 | 0.800466 | 1.422459e-48 | -8.615850e-47 |
Msa0876190 | Msa1298820 | 0.800578 | 1.349803e-48 | -8.615850e-47 |
Msa0876200 | Msa1298820 | 0.802175 | 6.356217e-49 | -8.615850e-47 |
Msa0878500 | Msa1298820 | 0.808750 | 2.657085e-50 | -8.615850e-47 |
Msa0880140 | Msa1298820 | 0.815461 | 9.137904e-52 | -8.615850e-47 |
Msa0920610 | Msa1298820 | 0.819733 | 9.947467e-53 | -8.615850e-47 |
Msa0938220 | Msa1298820 | 0.803361 | 3.616403e-49 | -8.615850e-47 |
Msa0941190 | Msa1298820 | 0.800920 | 1.149254e-48 | -8.615850e-47 |
Msa0944190 | Msa1298820 | 0.815992 | 6.957148e-52 | -8.615850e-47 |
Msa0945110 | Msa1298820 | 0.814134 | 1.798603e-51 | -8.615850e-47 |
Msa0952120 | Msa1298820 | 0.811189 | 7.928827e-51 | -8.615850e-47 |
Msa0966400 | Msa1298820 | 0.806863 | 6.688942e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298820 | MtrunA17_Chr4g0058711 | 98.142 | 323 | 6 | 0 | 1 | 323 | 1 | 323 | 0.0 | 649 |
Msa1298820 | MtrunA17_Chr3g0117171 | 70.440 | 318 | 89 | 3 | 1 | 317 | 1 | 314 | 7.69e-149 | 423 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298820 | AT3G54170.1 | 62.500 | 288 | 98 | 4 | 9 | 295 | 6 | 284 | 3.02e-120 | 349 |
Find 107 sgRNAs with CRISPR-Local
Find 574 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCGGCTTGGTCTTGGGCT+TGG | 0.160943 | 8_3:-59660835 | None:intergenic |
CTGAACAAAGAAATGAAAAT+TGG | 0.191751 | 8_3:-59660859 | None:intergenic |
AAGGTAATTAATCACCAATT+TGG | 0.198806 | 8_3:-59663009 | None:intergenic |
TACGATAGTTATAATTCTTA+TGG | 0.214687 | 8_3:-59669693 | None:intergenic |
CTCAGCTTCTCTCCGATTCT+AGG | 0.243687 | 8_3:+59660991 | Msa1298820:five_prime_UTR |
TTCGGCTTGGTCTTGGGCTT+GGG | 0.252798 | 8_3:-59660834 | None:intergenic |
TGAAGAGTTTACGCGGTTAA+AGG | 0.276638 | 8_3:+59665909 | Msa1298820:CDS |
ATGCTTTCTAGTACCCAAAT+TGG | 0.286019 | 8_3:+59662995 | Msa1298820:intron |
CAACAGCAGGAATTTGATTT+CGG | 0.289698 | 8_3:+59661128 | Msa1298820:intron |
ATTGGGCTTCGGCTTGGTCT+TGG | 0.290145 | 8_3:-59660841 | None:intergenic |
CGATTTACCGGAACACGTTC+AGG | 0.304950 | 8_3:+59661155 | Msa1298820:CDS |
TTAACCGCGTAAACTCTTCA+TGG | 0.307845 | 8_3:-59665906 | None:intergenic |
TTCTACTTCAGCTGTCGTTT+TGG | 0.332049 | 8_3:-59661438 | None:intergenic |
GAATTACGTCGTCGAGAGTT+GGG | 0.342049 | 8_3:-59661039 | None:intergenic |
GCTTGAAAAGGCAAAGAAAA+AGG | 0.349170 | 8_3:+59663172 | Msa1298820:intron |
GCAACTTCCCCATCTTGCTT+TGG | 0.351234 | 8_3:-59667384 | None:intergenic |
TTGGGCTTCGGCTTGGTCTT+GGG | 0.356924 | 8_3:-59660840 | None:intergenic |
ATTTGATCTTTCCACATCAT+TGG | 0.357734 | 8_3:-59668716 | None:intergenic |
CAACTTCCCCATCTTGCTTT+GGG | 0.360695 | 8_3:-59667383 | None:intergenic |
AGGTAATTAATCACCAATTT+GGG | 0.361400 | 8_3:-59663008 | None:intergenic |
GTAAACTCTTCATGGATTAC+TGG | 0.375451 | 8_3:-59665898 | None:intergenic |
AGTAAAACCTGAACGTGTTC+CGG | 0.389438 | 8_3:-59661162 | None:intergenic |
ATAGAATTTAGTTGCGGAAA+AGG | 0.391098 | 8_3:+59667309 | Msa1298820:intron |
GAGCTCAGAAATCAATTTGA+AGG | 0.391677 | 8_3:+59667830 | Msa1298820:CDS |
AAATAAAATGATAAACTAGT+AGG | 0.395671 | 8_3:+59660756 | None:intergenic |
GCTGAAGTAGAAGCTGCTTC+TGG | 0.396795 | 8_3:+59661449 | Msa1298820:CDS |
GATTCAGTCACGGTGGCGTA+TGG | 0.400512 | 8_3:-59669724 | None:intergenic |
CTGATGATTTCAGTGCTTGA+AGG | 0.408490 | 8_3:-59663028 | None:intergenic |
TACAGAGTTGCAGAAACATA+TGG | 0.411106 | 8_3:+59668684 | Msa1298820:intron |
AGTAGGGTGGTCGAGAAGTA+TGG | 0.415038 | 8_3:+59660773 | Msa1298820:five_prime_UTR |
CAAGAGGAAAATGAAGAGAT+TGG | 0.415809 | 8_3:+59667430 | Msa1298820:CDS |
TGAACAAAGAAATGAAAATT+GGG | 0.419985 | 8_3:-59660858 | None:intergenic |
AGTAGAGTCCTTAGCGGATC+AGG | 0.430293 | 8_3:+59663049 | Msa1298820:CDS |
AGAATTACGTCGTCGAGAGT+TGG | 0.443671 | 8_3:-59661040 | None:intergenic |
TTGGCTTGAGTTGAGCTTTG+AGG | 0.443751 | 8_3:-59664892 | None:intergenic |
ATGAAAATTGGGCTTCGGCT+TGG | 0.445291 | 8_3:-59660847 | None:intergenic |
ATTTGCTCTCCCGTTCTCTC+TGG | 0.447211 | 8_3:-59669470 | None:intergenic |
CTGAGTGAAGTAGCTGTTGC+TGG | 0.458633 | 8_3:-59660973 | None:intergenic |
TTTACTTCCCAAAGCAAGAT+GGG | 0.460062 | 8_3:+59667376 | Msa1298820:CDS |
GATTTCGGAGAACGATTTAC+CGG | 0.460869 | 8_3:+59661143 | Msa1298820:CDS |
AAGAAATGAAAATTGGGCTT+CGG | 0.461713 | 8_3:-59660852 | None:intergenic |
TGGGGAAGACATGGTGAAGC+TGG | 0.462098 | 8_3:-59661020 | None:intergenic |
CACAATACGAGATTCAGAAT+TGG | 0.466801 | 8_3:+59662800 | Msa1298820:CDS |
AAGTAGCTGTTGCTGGTACT+TGG | 0.471985 | 8_3:-59660966 | None:intergenic |
CAAATGCAGCACGTAATGCC+AGG | 0.472508 | 8_3:+59669488 | Msa1298820:exon |
TCTTCTGCTGAATTTGATGA+TGG | 0.474662 | 8_3:+59661287 | Msa1298820:CDS |
ACAATTTCAGTCTGCTGTAC+GGG | 0.475571 | 8_3:+59664868 | Msa1298820:intron |
TTGCAGTCTTCAAGACTGTA+AGG | 0.477309 | 8_3:+59661604 | Msa1298820:intron |
GCTGCTTCTGGTGTTACAAC+CGG | 0.483880 | 8_3:+59661461 | Msa1298820:CDS |
AACAATTTCAGTCTGCTGTA+CGG | 0.486423 | 8_3:+59664867 | Msa1298820:intron |
ATTTACTTCCCAAAGCAAGA+TGG | 0.488868 | 8_3:+59667375 | Msa1298820:CDS |
GCGAAGAGACAAAATCATTC+CGG | 0.489304 | 8_3:-59661480 | None:intergenic |
TCAGCTTCTCTCCGATTCTA+GGG | 0.490433 | 8_3:+59660992 | Msa1298820:five_prime_UTR |
GATTGGGCTTCAAGCTTCTG+AGG | 0.495982 | 8_3:+59667447 | Msa1298820:CDS |
CAAGATGGGGAAGTTGCTAA+TGG | 0.504381 | 8_3:+59667390 | Msa1298820:CDS |
AAGAGGAAAATGAAGAGATT+GGG | 0.505513 | 8_3:+59667431 | Msa1298820:CDS |
ATGTTCAACTCCATATGTTC+AGG | 0.506370 | 8_3:+59669756 | Msa1298820:three_prime_UTR |
AATGCACCATTCATACCTGC+TGG | 0.506971 | 8_3:+59662838 | Msa1298820:CDS |
TAGATACTGTAAGTCATAAG+AGG | 0.508307 | 8_3:+59661264 | Msa1298820:intron |
TATGTTACCTTCTTTCCGTA+AGG | 0.520035 | 8_3:-59661326 | None:intergenic |
AACAATACCTGCATTGATGT+TGG | 0.525374 | 8_3:-59664911 | None:intergenic |
AATAAAATGATAAACTAGTA+GGG | 0.529613 | 8_3:+59660757 | None:intergenic |
TATTTGTTATCAGCTTGAAA+AGG | 0.532310 | 8_3:+59663160 | Msa1298820:intron |
GCTTCAAGCTTCTGAGGGAA+AGG | 0.532560 | 8_3:+59667453 | Msa1298820:CDS |
TATATTTAAGAATGAACTTG+AGG | 0.535382 | 8_3:+59662774 | Msa1298820:intron |
GTGGTCCCAGCAGGTATGAA+TGG | 0.536045 | 8_3:-59662844 | None:intergenic |
GAAATGGTTAATTACTTCTG+TGG | 0.537939 | 8_3:+59669578 | Msa1298820:three_prime_UTR |
TAATGATCCTTACGGAAAGA+AGG | 0.539652 | 8_3:+59661319 | Msa1298820:CDS |
ATTCAGTCACGGTGGCGTAT+GGG | 0.542914 | 8_3:-59669723 | None:intergenic |
AGTATCATCTCGTCAATCCC+TGG | 0.546748 | 8_3:-59669506 | None:intergenic |
TAACCTGGTGTGGTCCCAGC+AGG | 0.549468 | 8_3:-59662853 | None:intergenic |
ATACCTGCTGGGACCACACC+AGG | 0.553859 | 8_3:+59662850 | Msa1298820:CDS |
TATTTAAATTGCAGGCAAGA+AGG | 0.559968 | 8_3:+59665863 | Msa1298820:intron |
AATTACGTCGTCGAGAGTTG+GGG | 0.561904 | 8_3:-59661038 | None:intergenic |
TGTGGAAAGATCAAATGAAA+CGG | 0.567946 | 8_3:+59668723 | Msa1298820:CDS |
CTTGGGAGAGATGAAAATGA+GGG | 0.573038 | 8_3:-59660817 | None:intergenic |
AGGGTGGTCGAGAAGTATGG+TGG | 0.576529 | 8_3:+59660776 | Msa1298820:five_prime_UTR |
GGAAACGCTTGATTCGTGCT+TGG | 0.577281 | 8_3:+59661625 | Msa1298820:CDS |
GCAAGGTAAATTAGACGAGA+AGG | 0.580209 | 8_3:+59669401 | Msa1298820:CDS |
ATCATCAGTAGAGTCCTTAG+CGG | 0.584514 | 8_3:+59663043 | Msa1298820:CDS |
GTTGCTGGTACTTGGAGTAG+AGG | 0.585831 | 8_3:-59660958 | None:intergenic |
ATTGGGCTTCAAGCTTCTGA+GGG | 0.585994 | 8_3:+59667448 | Msa1298820:CDS |
ACTCAAGCCAACATCAATGC+AGG | 0.586843 | 8_3:+59664904 | Msa1298820:CDS |
CAGTCACGGTGGCGTATGGG+TGG | 0.590923 | 8_3:-59669720 | None:intergenic |
GTCGAGAGTTGGGGAAGACA+TGG | 0.592053 | 8_3:-59661029 | None:intergenic |
CTCATCATAGAATTTAGTTG+CGG | 0.594727 | 8_3:+59667303 | Msa1298820:intron |
TAAATGTAAAACTCTGCAAG+AGG | 0.603180 | 8_3:+59667414 | Msa1298820:CDS |
GGAAAAGGACACAAGACTAA+AGG | 0.604232 | 8_3:+59667324 | Msa1298820:CDS |
TGGATTTGAGAAAATTGTTG+AGG | 0.604732 | 8_3:+59669788 | Msa1298820:three_prime_UTR |
ATGCACCATTCATACCTGCT+GGG | 0.605615 | 8_3:+59662839 | Msa1298820:CDS |
GGGTGGTCGAGAAGTATGGT+GGG | 0.607491 | 8_3:+59660777 | Msa1298820:five_prime_UTR |
AACTGTGATTTACTATTGCT+AGG | 0.621168 | 8_3:+59669666 | Msa1298820:three_prime_UTR |
GCTTGGGAGAGATGAAAATG+AGG | 0.622456 | 8_3:-59660818 | None:intergenic |
TGAACATATGGAGTTGAACA+TGG | 0.622874 | 8_3:-59669754 | None:intergenic |
GCAAGAGATAGCAAAGCTGA+AGG | 0.638072 | 8_3:+59663229 | Msa1298820:CDS |
TTACTTCCCAAAGCAAGATG+GGG | 0.638560 | 8_3:+59667377 | Msa1298820:CDS |
ACGTACAAACTAACCTGGTG+TGG | 0.639868 | 8_3:-59662863 | None:intergenic |
GAGTTGCAGAAACATATGGA+TGG | 0.643387 | 8_3:+59668688 | Msa1298820:intron |
GGATGGTTTGACCAATGATG+TGG | 0.644456 | 8_3:+59668705 | Msa1298820:CDS |
AAATGCAGCACGTAATGCCA+GGG | 0.649838 | 8_3:+59669489 | Msa1298820:exon |
TTGGGAGAGATGAAAATGAG+GGG | 0.653039 | 8_3:-59660816 | None:intergenic |
TGGGAGAGATGAAAATGAGG+GGG | 0.656863 | 8_3:-59660815 | None:intergenic |
AAAATGATAAACTAGTAGGG+TGG | 0.673724 | 8_3:+59660760 | Msa1298820:five_prime_UTR |
TGGTACTCATGATTCAGTCA+CGG | 0.682177 | 8_3:-59669734 | None:intergenic |
TGTGATTTACTATTGCTAGG+TGG | 0.700981 | 8_3:+59669669 | Msa1298820:three_prime_UTR |
TAATCCATGAAGAGTTTACG+CGG | 0.731754 | 8_3:+59665902 | Msa1298820:CDS |
TACTCATGATTCAGTCACGG+TGG | 0.745180 | 8_3:-59669731 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATCTTTAAAATATATTG+TGG | + | chr8_3:59664018-59664037 | Msa1298820:intron | 10.0% |
!!! | TTAAATCAATTTTGATTTTT+TGG | + | chr8_3:59665965-59665984 | Msa1298820:intron | 10.0% |
!! | ATAAATTAATATATATGTAG+CGG | - | chr8_3:59666350-59666369 | None:intergenic | 10.0% |
!! | TATATTAATTTATTTACAGA+AGG | + | chr8_3:59666357-59666376 | Msa1298820:intron | 10.0% |
!! | TAAATTGAAAATTGTAATGT+TGG | + | chr8_3:59661402-59661421 | Msa1298820:intron | 15.0% |
!!! | CTTTTAAATTATGTTATTGA+AGG | + | chr8_3:59661913-59661932 | Msa1298820:intron | 15.0% |
!! | TAAAAAAGAAATAATTTCTC+AGG | - | chr8_3:59662976-59662995 | None:intergenic | 15.0% |
!! | ATAAATATGATCAATGTATA+AGG | - | chr8_3:59663122-59663141 | None:intergenic | 15.0% |
!!! | AAAATCATTTTTCATGTTTT+AGG | + | chr8_3:59663669-59663688 | Msa1298820:intron | 15.0% |
!! | ATAGTATTAGTATTTAGTAT+TGG | - | chr8_3:59664155-59664174 | None:intergenic | 15.0% |
!! | AAAAAGATTCAATTAAAACA+CGG | - | chr8_3:59664267-59664286 | None:intergenic | 15.0% |
!! | ACCATAAACATATATTTAAT+GGG | - | chr8_3:59665693-59665712 | None:intergenic | 15.0% |
!! | TACCATAAACATATATTTAA+TGG | - | chr8_3:59665694-59665713 | None:intergenic | 15.0% |
!!! | TGTATTTTGATTTTCATTTT+AGG | - | chr8_3:59666383-59666402 | None:intergenic | 15.0% |
!!! | AAGAAAAAACACTTTTATTT+AGG | + | chr8_3:59666700-59666719 | Msa1298820:intron | 15.0% |
!! | ATAAACAATATTGACAAATT+AGG | - | chr8_3:59667717-59667736 | None:intergenic | 15.0% |
!! | TCAATGTATGTTTAAAAAAA+GGG | - | chr8_3:59668207-59668226 | None:intergenic | 15.0% |
!! | ATCAAAGATAAAAATAATGA+CGG | + | chr8_3:59668356-59668375 | Msa1298820:intron | 15.0% |
!! | TATTAACTTAGTAATGATAA+AGG | + | chr8_3:59668455-59668474 | Msa1298820:intron | 15.0% |
!!! | ATTAAAAGTTATGCAATTTT+TGG | + | chr8_3:59668611-59668630 | Msa1298820:intron | 15.0% |
!! | TGAACAAAGAAATGAAAATT+GGG | - | chr8_3:59660861-59660880 | None:intergenic | 20.0% |
!!! | ATTAACATGTGAATTTTTTG+AGG | - | chr8_3:59661193-59661212 | None:intergenic | 20.0% |
!! | TTACAGTATCTAATTCATAA+CGG | - | chr8_3:59661256-59661275 | None:intergenic | 20.0% |
!!! | AATTTTGATAATGATCCTTA+CGG | + | chr8_3:59661311-59661330 | Msa1298820:CDS | 20.0% |
!!! | AAAAATCCAGTAAGAATTTT+AGG | - | chr8_3:59661569-59661588 | None:intergenic | 20.0% |
!! | ATTCCAATAAACCATTAATT+TGG | + | chr8_3:59661698-59661717 | Msa1298820:intron | 20.0% |
!!! | GTCAGATTTTATATACTTTA+GGG | - | chr8_3:59661784-59661803 | None:intergenic | 20.0% |
!!! | TGTCAGATTTTATATACTTT+AGG | - | chr8_3:59661785-59661804 | None:intergenic | 20.0% |
!!! | TGACGGATTTTATATAATTT+AGG | + | chr8_3:59661839-59661858 | Msa1298820:intron | 20.0% |
!!! | GACGGATTTTATATAATTTA+GGG | + | chr8_3:59661840-59661859 | Msa1298820:intron | 20.0% |
!! | AATTATGTTATTGAAGGAAA+TGG | + | chr8_3:59661919-59661938 | Msa1298820:intron | 20.0% |
!! | AAAAAAATAGAGAAAACAGA+GGG | - | chr8_3:59662288-59662307 | None:intergenic | 20.0% |
!! | GAAATAAATAGAGAAAATAG+AGG | - | chr8_3:59662370-59662389 | None:intergenic | 20.0% |
!! | TATATTTAAGAATGAACTTG+AGG | + | chr8_3:59662774-59662793 | Msa1298820:intron | 20.0% |
!!! | ATAGAATTTTAGATTCTGAA+TGG | - | chr8_3:59663080-59663099 | None:intergenic | 20.0% |
!!! | TTCTATTTTTTGCTTCAAAA+TGG | + | chr8_3:59663094-59663113 | Msa1298820:intron | 20.0% |
!! | TAACAAATATAAATGTCGAA+GGG | - | chr8_3:59663149-59663168 | None:intergenic | 20.0% |
!! | ATAACAAATATAAATGTCGA+AGG | - | chr8_3:59663150-59663169 | None:intergenic | 20.0% |
!! | TTAATTATATATTCTCTCCT+GGG | - | chr8_3:59663338-59663357 | None:intergenic | 20.0% |
!! | TTAACAGAATAAGAAGAAAT+TGG | + | chr8_3:59663354-59663373 | Msa1298820:intron | 20.0% |
!!! | TTACACACAAAATGATTTTT+GGG | - | chr8_3:59663753-59663772 | None:intergenic | 20.0% |
!!! | ATTACACACAAAATGATTTT+TGG | - | chr8_3:59663754-59663773 | None:intergenic | 20.0% |
!!! | TTAGATAAGTTTTGATAACA+TGG | + | chr8_3:59664365-59664384 | Msa1298820:intron | 20.0% |
!! | AACATTGTATTAGAATCATT+GGG | - | chr8_3:59664502-59664521 | None:intergenic | 20.0% |
!! | TAACATTGTATTAGAATCAT+TGG | - | chr8_3:59664503-59664522 | None:intergenic | 20.0% |
!! | TGAAATGTGTTGTAATAATA+GGG | - | chr8_3:59664567-59664586 | None:intergenic | 20.0% |
!!! | TATTATTTTACAGATGTTAG+TGG | + | chr8_3:59664781-59664800 | Msa1298820:intron | 20.0% |
!! | TATGTTGTATGACATTTAAT+AGG | + | chr8_3:59665107-59665126 | Msa1298820:intron | 20.0% |
!! | TCCCATTAAATATATGTTTA+TGG | + | chr8_3:59665689-59665708 | Msa1298820:intron | 20.0% |
!! | TCTAAAAAGTTATCAAATAG+CGG | + | chr8_3:59665730-59665749 | Msa1298820:intron | 20.0% |
!! | ATAGGAGCTTATTATATTTA+GGG | + | chr8_3:59666222-59666241 | Msa1298820:intron | 20.0% |
!!! | GACATATTTTTTCTTCAAAT+GGG | + | chr8_3:59666244-59666263 | Msa1298820:intron | 20.0% |
!!! | ACATATTTTTTCTTCAAATG+GGG | + | chr8_3:59666245-59666264 | Msa1298820:intron | 20.0% |
!! | ATTGCTAACGTAAAAAATAT+AGG | + | chr8_3:59666315-59666334 | Msa1298820:intron | 20.0% |
!!! | AGAAATATTTTTTTCTCTCT+TGG | - | chr8_3:59666600-59666619 | None:intergenic | 20.0% |
!! | TCTTTAATTAATATGAAGCA+CGG | - | chr8_3:59666809-59666828 | None:intergenic | 20.0% |
!! | TGCTTCATATTAATTAAAGA+CGG | + | chr8_3:59666809-59666828 | Msa1298820:intron | 20.0% |
!! | GCAAAAAGAAATAAAAAAGA+AGG | - | chr8_3:59667751-59667770 | None:intergenic | 20.0% |
!!! | CTTTTTTATTTCTTTTTGCT+TGG | + | chr8_3:59667752-59667771 | Msa1298820:intron | 20.0% |
!! | CTCAATGTATGTTTAAAAAA+AGG | - | chr8_3:59668208-59668227 | None:intergenic | 20.0% |
!! | GTGTTAGATAATAAAGTATA+GGG | - | chr8_3:59668495-59668514 | None:intergenic | 20.0% |
!! | AGTGTTAGATAATAAAGTAT+AGG | - | chr8_3:59668496-59668515 | None:intergenic | 20.0% |
!! | ACTTAATAGTATTATTGTGT+GGG | + | chr8_3:59668513-59668532 | Msa1298820:intron | 20.0% |
!! | ATGTTATAAGATTGAAAACT+AGG | + | chr8_3:59668587-59668606 | Msa1298820:intron | 20.0% |
!! | TGTTATAAGATTGAAAACTA+GGG | + | chr8_3:59668588-59668607 | Msa1298820:intron | 20.0% |
!! | AATACAATTAACAAAGCTTA+GGG | - | chr8_3:59669148-59669167 | None:intergenic | 20.0% |
!! | AAATACAATTAACAAAGCTT+AGG | - | chr8_3:59669149-59669168 | None:intergenic | 20.0% |
!!! | ATTGTATTTCGCATTTTTTA+TGG | + | chr8_3:59669160-59669179 | Msa1298820:intron | 20.0% |
!! | TACGATAGTTATAATTCTTA+TGG | - | chr8_3:59669696-59669715 | None:intergenic | 20.0% |
! | CTGAACAAAGAAATGAAAAT+TGG | - | chr8_3:59660862-59660881 | None:intergenic | 25.0% |
!! | ATAGTTTAGGACCAAATTAA+TGG | - | chr8_3:59661712-59661731 | None:intergenic | 25.0% |
! | TACATAATTTAGGGACTAAA+TGG | - | chr8_3:59661746-59661765 | None:intergenic | 25.0% |
!!! | TATTTTAGGGACTAAATTGA+TGG | + | chr8_3:59661884-59661903 | Msa1298820:intron | 25.0% |
! | ATATGCACATTAAATTCCTT+AGG | - | chr8_3:59662025-59662044 | None:intergenic | 25.0% |
! | CAAAAAAATAGAGAAAACAG+AGG | - | chr8_3:59662289-59662308 | None:intergenic | 25.0% |
! | AGTTACATATATAACAGTCT+AGG | + | chr8_3:59662574-59662593 | Msa1298820:intron | 25.0% |
! | TCTTTCCTAAAATTGTTTAC+TGG | + | chr8_3:59662744-59662763 | Msa1298820:intron | 25.0% |
!! | ATGATCCAGTAAACAATTTT+AGG | - | chr8_3:59662752-59662771 | None:intergenic | 25.0% |
! | AGGTAATTAATCACCAATTT+GGG | - | chr8_3:59663011-59663030 | None:intergenic | 25.0% |
! | AAGGTAATTAATCACCAATT+TGG | - | chr8_3:59663012-59663031 | None:intergenic | 25.0% |
!!! | TATTTGTTATCAGCTTGAAA+AGG | + | chr8_3:59663160-59663179 | Msa1298820:intron | 25.0% |
! | AAACTGTTCTTTATAGTATC+TGG | + | chr8_3:59663265-59663284 | Msa1298820:intron | 25.0% |
! | TAATTATATATTCTCTCCTG+GGG | - | chr8_3:59663337-59663356 | None:intergenic | 25.0% |
! | GTTAATTATATATTCTCTCC+TGG | - | chr8_3:59663339-59663358 | None:intergenic | 25.0% |
!!! | GGTGTTTTTTTTTTTTTGAG+AGG | + | chr8_3:59663690-59663709 | Msa1298820:intron | 25.0% |
!! | CATAAAAGAATGCTTTTAAC+AGG | - | chr8_3:59663904-59663923 | None:intergenic | 25.0% |
!! | TTTCAATTTGTCATTTATCG+AGG | + | chr8_3:59664041-59664060 | Msa1298820:intron | 25.0% |
! | TATTTGATTCTGTATTCAGT+TGG | + | chr8_3:59664103-59664122 | Msa1298820:intron | 25.0% |
! | ATTTGATTCTGTATTCAGTT+GGG | + | chr8_3:59664104-59664123 | Msa1298820:intron | 25.0% |
!! | CTTTTGTAATGACTAATAGT+TGG | - | chr8_3:59664206-59664225 | None:intergenic | 25.0% |
! | TTTGTTCAAAACTGTGTTAT+GGG | - | chr8_3:59664303-59664322 | None:intergenic | 25.0% |
! | ATTTGTTCAAAACTGTGTTA+TGG | - | chr8_3:59664304-59664323 | None:intergenic | 25.0% |
! | TAATAATAGGGTTTAGATAG+AGG | - | chr8_3:59664555-59664574 | None:intergenic | 25.0% |
! | GTGAAATGTGTTGTAATAAT+AGG | - | chr8_3:59664568-59664587 | None:intergenic | 25.0% |
!!! | ATTTTGAAACCAATTCATTC+TGG | + | chr8_3:59664627-59664646 | Msa1298820:intron | 25.0% |
!! | TCATGCATATTAATTTGAGA+AGG | + | chr8_3:59664998-59665017 | Msa1298820:intron | 25.0% |
!! | CATGCATATTAATTTGAGAA+GGG | + | chr8_3:59664999-59665018 | Msa1298820:intron | 25.0% |
! | AGTCATAAACAATATCTAAG+TGG | - | chr8_3:59665052-59665071 | None:intergenic | 25.0% |
! | AAGTGATTGCACAATATTAT+TGG | + | chr8_3:59665132-59665151 | Msa1298820:intron | 25.0% |
! | TGTGGTTGTTATCAATATTA+AGG | + | chr8_3:59665262-59665281 | Msa1298820:intron | 25.0% |
!!! | AACATTCATTTGAGTTTTGT+TGG | + | chr8_3:59665584-59665603 | Msa1298820:intron | 25.0% |
! | AAACATAAGGCAATAATTTC+GGG | - | chr8_3:59665837-59665856 | None:intergenic | 25.0% |
! | CAAACATAAGGCAATAATTT+CGG | - | chr8_3:59665838-59665857 | None:intergenic | 25.0% |
! | TTAAATAGCAACCAAACATA+AGG | - | chr8_3:59665850-59665869 | None:intergenic | 25.0% |
! | ATCAAATGGTCTAACATTAA+AGG | - | chr8_3:59666100-59666119 | None:intergenic | 25.0% |
! | AATAAGAACCCCAAATTAAA+GGG | - | chr8_3:59666139-59666158 | None:intergenic | 25.0% |
! | TAATAAGAACCCCAAATTAA+AGG | - | chr8_3:59666140-59666159 | None:intergenic | 25.0% |
!!! | TTTAATTTGGGGTTCTTATT+AGG | + | chr8_3:59666139-59666158 | Msa1298820:intron | 25.0% |
!! | TTAATTTGGGGTTCTTATTA+GGG | + | chr8_3:59666140-59666159 | Msa1298820:intron | 25.0% |
! | CATAGGAGCTTATTATATTT+AGG | + | chr8_3:59666221-59666240 | Msa1298820:intron | 25.0% |
!!! | GGACATATTTTTTCTTCAAA+TGG | + | chr8_3:59666243-59666262 | Msa1298820:intron | 25.0% |
! | TTCATATTAATTAAAGACGG+AGG | + | chr8_3:59666812-59666831 | Msa1298820:intron | 25.0% |
! | TCATATTAATTAAAGACGGA+GGG | + | chr8_3:59666813-59666832 | Msa1298820:intron | 25.0% |
!! | TTTTTGCGAAAAAAAGAGAA+AGG | + | chr8_3:59666867-59666886 | Msa1298820:intron | 25.0% |
!! | AGTTATCATTTTCATCTGTA+TGG | - | chr8_3:59666944-59666963 | None:intergenic | 25.0% |
! | AGATGAAAATGATAACTTCT+AGG | + | chr8_3:59666947-59666966 | Msa1298820:intron | 25.0% |
!! | CTTTAATTTCAGTGATGAAT+CGG | + | chr8_3:59667023-59667042 | Msa1298820:intron | 25.0% |
! | CTAATATATGTAGGAAATTG+GGG | - | chr8_3:59667208-59667227 | None:intergenic | 25.0% |
! | CCTAATATATGTAGGAAATT+GGG | - | chr8_3:59667209-59667228 | None:intergenic | 25.0% |
! | TCCTAATATATGTAGGAAAT+TGG | - | chr8_3:59667210-59667229 | None:intergenic | 25.0% |
! | TTCCTACATATATTAGGAAT+TGG | + | chr8_3:59667212-59667231 | Msa1298820:intron | 25.0% |
! | AACCAATTCCTAATATATGT+AGG | - | chr8_3:59667217-59667236 | None:intergenic | 25.0% |
! | AACTGAGAAAACAAAGTTTA+TGG | + | chr8_3:59667631-59667650 | Msa1298820:intron | 25.0% |
! | AGTTTATGGTATTTATTGAC+TGG | + | chr8_3:59667645-59667664 | Msa1298820:intron | 25.0% |
! | TAGCCATGTAATGATATAAA+GGG | - | chr8_3:59667909-59667928 | None:intergenic | 25.0% |
! | TGTTTCTTCTGTTACTATAT+TGG | + | chr8_3:59667942-59667961 | Msa1298820:intron | 25.0% |
! | TAAACATACATTGAGAATAG+AGG | + | chr8_3:59668011-59668030 | Msa1298820:intron | 25.0% |
! | AAACATACATTGAGAATAGA+GGG | + | chr8_3:59668012-59668031 | Msa1298820:intron | 25.0% |
! | TATTGAGAAAATTACATGTG+TGG | + | chr8_3:59668259-59668278 | Msa1298820:intron | 25.0% |
! | ATTGAGAAAATTACATGTGT+GGG | + | chr8_3:59668260-59668279 | Msa1298820:intron | 25.0% |
! | CAATAGCTTAATACTACAAA+AGG | + | chr8_3:59668400-59668419 | Msa1298820:intron | 25.0% |
! | TACTAAGTTAATAGTCTGTT+AGG | - | chr8_3:59668448-59668467 | None:intergenic | 25.0% |
! | CACTTAATAGTATTATTGTG+TGG | + | chr8_3:59668512-59668531 | Msa1298820:intron | 25.0% |
!!! | CAGTGAAGTTTTTTAAATCA+CGG | - | chr8_3:59668778-59668797 | None:intergenic | 25.0% |
!!! | ATGAAGATAAGCATTGTTTT+AGG | + | chr8_3:59668859-59668878 | Msa1298820:intron | 25.0% |
!! | TCAACAAAACTTTTGTCTTA+GGG | + | chr8_3:59668898-59668917 | Msa1298820:intron | 25.0% |
! | CACAAATGCTAATATGAAAT+AGG | + | chr8_3:59668938-59668957 | Msa1298820:intron | 25.0% |
! | TTTGAGTGATAAGAAAATCA+TGG | + | chr8_3:59669026-59669045 | Msa1298820:intron | 25.0% |
! | TTGAGTGATAAGAAAATCAT+GGG | + | chr8_3:59669027-59669046 | Msa1298820:intron | 25.0% |
! | ATACAATTAACAAAGCTTAG+GGG | - | chr8_3:59669147-59669166 | None:intergenic | 25.0% |
! | ATGTTTGTATTGTGTAAATG+TGG | + | chr8_3:59669191-59669210 | Msa1298820:intron | 25.0% |
!!! | TTTTATGCCGTTATTTTTCA+AGG | + | chr8_3:59669226-59669245 | Msa1298820:intron | 25.0% |
!!! | TTTATGCCGTTATTTTTCAA+GGG | + | chr8_3:59669227-59669246 | Msa1298820:intron | 25.0% |
! | ACAATTAAACAAGAATACGA+TGG | - | chr8_3:59669328-59669347 | None:intergenic | 25.0% |
!! | TATTCTTGTTTAATTGTCCA+AGG | + | chr8_3:59669331-59669350 | Msa1298820:intron | 25.0% |
!! | AGATTTTAAACAGATATCAC+TGG | + | chr8_3:59669534-59669553 | Msa1298820:three_prime_UTR | 25.0% |
!!! | GACTTCAATTTTTTTGTTGT+CGG | + | chr8_3:59669556-59669575 | Msa1298820:three_prime_UTR | 25.0% |
!!! | AATTTTTTTGTTGTCGGAAA+TGG | + | chr8_3:59669562-59669581 | Msa1298820:three_prime_UTR | 25.0% |
AAAATGATAAACTAGTAGGG+TGG | + | chr8_3:59660760-59660779 | Msa1298820:five_prime_UTR | 30.0% | |
AAGAAATGAAAATTGGGCTT+CGG | - | chr8_3:59660855-59660874 | None:intergenic | 30.0% | |
TAGATACTGTAAGTCATAAG+AGG | + | chr8_3:59661264-59661283 | Msa1298820:intron | 30.0% | |
TTTCAGCCTAAAATTCTTAC+TGG | + | chr8_3:59661560-59661579 | Msa1298820:intron | 30.0% | |
GGACCAAATTAATGGTTTAT+TGG | - | chr8_3:59661704-59661723 | None:intergenic | 30.0% | |
GATGTTAAGGACTAAATTGA+CGG | + | chr8_3:59661822-59661841 | Msa1298820:intron | 30.0% | |
TAGATGAATCTAACCCTAAA+TGG | - | chr8_3:59662076-59662095 | None:intergenic | 30.0% | |
CGAAAAAACAGAGAAAATAG+AGG | - | chr8_3:59662329-59662348 | None:intergenic | 30.0% | |
!!! | ATTTTCTCTGTTTTTTCGCT+TGG | + | chr8_3:59662331-59662350 | Msa1298820:intron | 30.0% |
GGAAAGAAAAAGCTATAACT+AGG | - | chr8_3:59662731-59662750 | None:intergenic | 30.0% | |
AATTATATATTCTCTCCTGG+GGG | - | chr8_3:59663336-59663355 | None:intergenic | 30.0% | |
AAGTAAAACGACACTTGTTT+GGG | - | chr8_3:59663562-59663581 | None:intergenic | 30.0% | |
AAAGTAAAACGACACTTGTT+TGG | - | chr8_3:59663563-59663582 | None:intergenic | 30.0% | |
GTATTGCTTGAAAGATAAGA+TGG | - | chr8_3:59663822-59663841 | None:intergenic | 30.0% | |
AATATAAGCTCCGTAAAACA+TGG | - | chr8_3:59663865-59663884 | None:intergenic | 30.0% | |
AATACTATAACCAGTACTCT+AGG | + | chr8_3:59664167-59664186 | Msa1298820:intron | 30.0% | |
AAGATTCAATTAAAACACGG+TGG | - | chr8_3:59664264-59664283 | None:intergenic | 30.0% | |
CACATTTCACAATTCGTTAT+AGG | + | chr8_3:59664578-59664597 | Msa1298820:intron | 30.0% | |
AATTCGTTATAGGAACTGTA+TGG | + | chr8_3:59664588-59664607 | Msa1298820:intron | 30.0% | |
ATCAAGACTCAACAATCATA+TGG | - | chr8_3:59664672-59664691 | None:intergenic | 30.0% | |
! | ACTTTCATTTTCCATATGTC+AGG | + | chr8_3:59664708-59664727 | Msa1298820:intron | 30.0% |
AAATACAAACACCTGACATA+TGG | - | chr8_3:59664722-59664741 | None:intergenic | 30.0% | |
GATACACTCAAATACTTGTA+TGG | - | chr8_3:59664939-59664958 | None:intergenic | 30.0% | |
TTATTGGATGATTTCATGCT+AGG | + | chr8_3:59665148-59665167 | Msa1298820:intron | 30.0% | |
!!! | CGCTTATTTTATTCTTGTCT+TGG | - | chr8_3:59665233-59665252 | None:intergenic | 30.0% |
TCAAATGAATGTTCTAGCAT+GGG | - | chr8_3:59665577-59665596 | None:intergenic | 30.0% | |
CGAAATTATTGCCTTATGTT+TGG | + | chr8_3:59665836-59665855 | Msa1298820:intron | 30.0% | |
!! | TTGGTTGCTATTTAAATTGC+AGG | + | chr8_3:59665855-59665874 | Msa1298820:intron | 30.0% |
TATTTAAATTGCAGGCAAGA+AGG | + | chr8_3:59665863-59665882 | Msa1298820:intron | 30.0% | |
!!! | TTGATTTTTTGGCATGAAGT+CGG | + | chr8_3:59665976-59665995 | Msa1298820:intron | 30.0% |
!!! | TCGGGTAAATGTTTTAATTC+AGG | + | chr8_3:59665995-59666014 | Msa1298820:intron | 30.0% |
ATAAAACTATGACGACAACA+TGG | - | chr8_3:59666042-59666061 | None:intergenic | 30.0% | |
TAATGTTAGACCATTTGATG+AGG | + | chr8_3:59666101-59666120 | Msa1298820:intron | 30.0% | |
AATGTTAGACCATTTGATGA+GGG | + | chr8_3:59666102-59666121 | Msa1298820:intron | 30.0% | |
! | TAATTTGGGGTTCTTATTAG+GGG | + | chr8_3:59666141-59666160 | Msa1298820:intron | 30.0% |
CAAACATAGCCCTTATTAAT+GGG | - | chr8_3:59666169-59666188 | None:intergenic | 30.0% | |
TAATATATATGTAGCGGTGT+CGG | - | chr8_3:59666344-59666363 | None:intergenic | 30.0% | |
TTGAGAAACGTTGATCAATT+AGG | - | chr8_3:59666544-59666563 | None:intergenic | 30.0% | |
ACATATGTATCTCGTGTATA+CGG | + | chr8_3:59666565-59666584 | Msa1298820:intron | 30.0% | |
TATGAGTGTTATATAGGTGT+CGG | + | chr8_3:59666652-59666671 | Msa1298820:intron | 30.0% | |
AAAAAAGAGAAAGGTGGAAA+TGG | + | chr8_3:59666876-59666895 | Msa1298820:intron | 30.0% | |
AAAAAGAGAAAGGTGGAAAT+GGG | + | chr8_3:59666877-59666896 | Msa1298820:intron | 30.0% | |
! | TTCTCTCTAGTTTGATTATC+TGG | + | chr8_3:59666906-59666925 | Msa1298820:intron | 30.0% |
AAATGATAACTTCTAGGTGT+TGG | + | chr8_3:59666953-59666972 | Msa1298820:intron | 30.0% | |
AATGATAACTTCTAGGTGTT+GGG | + | chr8_3:59666954-59666973 | Msa1298820:intron | 30.0% | |
ATAAGTTTCTGAGTTGTGTT+TGG | + | chr8_3:59667057-59667076 | Msa1298820:intron | 30.0% | |
TAAGCCACAAGAAAAAGAAA+TGG | - | chr8_3:59667135-59667154 | None:intergenic | 30.0% | |
CCCAATTTCCTACATATATT+AGG | + | chr8_3:59667206-59667225 | Msa1298820:intron | 30.0% | |
TATAGACGCATTATTCACAT+TGG | + | chr8_3:59667245-59667264 | Msa1298820:intron | 30.0% | |
! | GAAGTCTTGTAAAAAAGAGT+TGG | - | chr8_3:59667279-59667298 | None:intergenic | 30.0% |
CTCATCATAGAATTTAGTTG+CGG | + | chr8_3:59667303-59667322 | Msa1298820:intron | 30.0% | |
ATAGAATTTAGTTGCGGAAA+AGG | + | chr8_3:59667309-59667328 | Msa1298820:intron | 30.0% | |
TAAATGTAAAACTCTGCAAG+AGG | + | chr8_3:59667414-59667433 | Msa1298820:CDS | 30.0% | |
AAGAGGAAAATGAAGAGATT+GGG | + | chr8_3:59667431-59667450 | Msa1298820:CDS | 30.0% | |
TACCTCATTCATTTCAAAGT+TGG | + | chr8_3:59667535-59667554 | Msa1298820:intron | 30.0% | |
!! | AACCAACTTTGAAATGAATG+AGG | - | chr8_3:59667540-59667559 | None:intergenic | 30.0% |
ACAGCAGATATATAGAATGT+GGG | - | chr8_3:59667571-59667590 | None:intergenic | 30.0% | |
TACAGCAGATATATAGAATG+TGG | - | chr8_3:59667572-59667591 | None:intergenic | 30.0% | |
TGAGTGATTTCATCACATTA+TGG | + | chr8_3:59667861-59667880 | Msa1298820:intron | 30.0% | |
GATTTCATCACATTATGGTT+TGG | + | chr8_3:59667866-59667885 | Msa1298820:intron | 30.0% | |
TGACCCTTTATATCATTACA+TGG | + | chr8_3:59667903-59667922 | Msa1298820:intron | 30.0% | |
GTAGCCATGTAATGATATAA+AGG | - | chr8_3:59667910-59667929 | None:intergenic | 30.0% | |
TATATCATTACATGGCTACT+TGG | + | chr8_3:59667911-59667930 | Msa1298820:intron | 30.0% | |
CTATATTGGATTCATCAAAC+AGG | + | chr8_3:59667956-59667975 | Msa1298820:intron | 30.0% | |
AACATACATTGAGAATAGAG+GGG | + | chr8_3:59668013-59668032 | Msa1298820:intron | 30.0% | |
AGATAAAAATAATGACGGCT+AGG | + | chr8_3:59668361-59668380 | Msa1298820:intron | 30.0% | |
GATAAAAATAATGACGGCTA+GGG | + | chr8_3:59668362-59668381 | Msa1298820:intron | 30.0% | |
CAAAATGTTAAATGTTCTGC+AGG | + | chr8_3:59668549-59668568 | Msa1298820:intron | 30.0% | |
AACTCTGTAGAAAATGCTAA+GGG | - | chr8_3:59668673-59668692 | None:intergenic | 30.0% | |
ATTTGATCTTTCCACATCAT+TGG | - | chr8_3:59668719-59668738 | None:intergenic | 30.0% | |
TGTGGAAAGATCAAATGAAA+CGG | + | chr8_3:59668723-59668742 | Msa1298820:CDS | 30.0% | |
CACGGTAAAATATGAAAGTA+GGG | - | chr8_3:59668760-59668779 | None:intergenic | 30.0% | |
TCACGGTAAAATATGAAAGT+AGG | - | chr8_3:59668761-59668780 | None:intergenic | 30.0% | |
!!! | TTGTTTTAGGAAACCCTTTA+AGG | + | chr8_3:59668872-59668891 | Msa1298820:intron | 30.0% |
!!! | CTAAGACAAAAGTTTTGTTG+AGG | - | chr8_3:59668899-59668918 | None:intergenic | 30.0% |
! | CTCAACAAAACTTTTGTCTT+AGG | + | chr8_3:59668897-59668916 | Msa1298820:intron | 30.0% |
! | AAACTTTTGTCTTAGGGAAA+AGG | + | chr8_3:59668904-59668923 | Msa1298820:intron | 30.0% |
!! | TTTGTTATTATTTCGCCAGA+GGG | - | chr8_3:59669063-59669082 | None:intergenic | 30.0% |
AAGTGCTTGTGTAGATAATA+TGG | + | chr8_3:59669081-59669100 | Msa1298820:intron | 30.0% | |
AAGATGAGTTGCAACAAAAA+AGG | + | chr8_3:59669445-59669464 | Msa1298820:CDS | 30.0% | |
GAAATGGTTAATTACTTCTG+TGG | + | chr8_3:59669578-59669597 | Msa1298820:three_prime_UTR | 30.0% | |
AACTGTGATTTACTATTGCT+AGG | + | chr8_3:59669666-59669685 | Msa1298820:three_prime_UTR | 30.0% | |
AGCAAAAAATCCTGAACATA+TGG | - | chr8_3:59669769-59669788 | None:intergenic | 30.0% | |
!!! | ATATGTTCAGGATTTTTTGC+TGG | + | chr8_3:59669768-59669787 | Msa1298820:three_prime_UTR | 30.0% |
! | CAACAGCAGGAATTTGATTT+CGG | + | chr8_3:59661128-59661147 | Msa1298820:intron | 35.0% |
TCTTCTGCTGAATTTGATGA+TGG | + | chr8_3:59661287-59661306 | Msa1298820:CDS | 35.0% | |
TAATGATCCTTACGGAAAGA+AGG | + | chr8_3:59661319-59661338 | Msa1298820:CDS | 35.0% | |
TATGTTACCTTCTTTCCGTA+AGG | - | chr8_3:59661329-59661348 | None:intergenic | 35.0% | |
!!! | GTAATGTTGGCTCATGTTTT+AGG | + | chr8_3:59661415-59661434 | Msa1298820:intron | 35.0% |
GGAAGTGAATGTGATAGTTT+AGG | - | chr8_3:59661725-59661744 | None:intergenic | 35.0% | |
AGTCCTTCTGTAAGATGTTA+AGG | + | chr8_3:59661809-59661828 | Msa1298820:intron | 35.0% | |
AGTCCTTAACATCTTACAGA+AGG | - | chr8_3:59661815-59661834 | None:intergenic | 35.0% | |
TTAGGGACTGAATTAGAGAA+AGG | + | chr8_3:59661857-59661876 | Msa1298820:intron | 35.0% | |
TAGGGACTGAATTAGAGAAA+GGG | + | chr8_3:59661858-59661877 | Msa1298820:intron | 35.0% | |
! | TAGAGAAAGGGTGGTATTTT+AGG | + | chr8_3:59661870-59661889 | Msa1298820:intron | 35.0% |
! | AGAGAAAGGGTGGTATTTTA+GGG | + | chr8_3:59661871-59661890 | Msa1298820:intron | 35.0% |
! | CAAAACATGTTTGTTGCCTA+AGG | + | chr8_3:59662006-59662025 | Msa1298820:intron | 35.0% |
CTCGAAATGTCAATACAAAC+AGG | + | chr8_3:59662050-59662069 | Msa1298820:intron | 35.0% | |
TCAATACAAACAGGCCATTT+AGG | + | chr8_3:59662059-59662078 | Msa1298820:intron | 35.0% | |
CAATACAAACAGGCCATTTA+GGG | + | chr8_3:59662060-59662079 | Msa1298820:intron | 35.0% | |
TGTGAACTCTATGAATCATG+TGG | + | chr8_3:59662120-59662139 | Msa1298820:intron | 35.0% | |
GTGAACTCTATGAATCATGT+GGG | + | chr8_3:59662121-59662140 | Msa1298820:intron | 35.0% | |
AGCAAAAAACAGAGGAAACA+GGG | - | chr8_3:59662260-59662279 | None:intergenic | 35.0% | |
GAGAAAATAGAGGAAAACAG+AGG | - | chr8_3:59662319-59662338 | None:intergenic | 35.0% | |
AAAACACGAGAAACGTAACA+CGG | - | chr8_3:59662432-59662451 | None:intergenic | 35.0% | |
GAGTTCACGTAACTAATTGT+TGG | + | chr8_3:59662534-59662553 | Msa1298820:intron | 35.0% | |
AGGTGTAAACATATCCTCTA+CGG | + | chr8_3:59662594-59662613 | Msa1298820:intron | 35.0% | |
! | AGATAATTTTCCAACCGTAG+AGG | - | chr8_3:59662611-59662630 | None:intergenic | 35.0% |
CACAATACGAGATTCAGAAT+TGG | + | chr8_3:59662800-59662819 | Msa1298820:CDS | 35.0% | |
AATTCACGTACAAACTAACC+TGG | - | chr8_3:59662871-59662890 | None:intergenic | 35.0% | |
! | ATGCTTTCTAGTACCCAAAT+TGG | + | chr8_3:59662995-59663014 | Msa1298820:intron | 35.0% |
GCTTGAAAAGGCAAAGAAAA+AGG | + | chr8_3:59663172-59663191 | Msa1298820:intron | 35.0% | |
AGAAGAAATTGGAGTGTAGT+TGG | + | chr8_3:59663365-59663384 | Msa1298820:intron | 35.0% | |
! | TGCTAAAGCAACGCTTATTT+TGG | - | chr8_3:59663526-59663545 | None:intergenic | 35.0% |
TGTTATACTAACTAGCACCT+CGG | + | chr8_3:59663779-59663798 | Msa1298820:intron | 35.0% | |
! | TACTTTCCAGCCATGTTTTA+CGG | + | chr8_3:59663852-59663871 | Msa1298820:intron | 35.0% |
TGAGCTTAAATCATAAGCAG+TGG | + | chr8_3:59663925-59663944 | Msa1298820:intron | 35.0% | |
!! | TAAAACACGGTGGTTACTTT+TGG | - | chr8_3:59664254-59664273 | None:intergenic | 35.0% |
GAAGAGAGAGAGAGAAAAAA+AGG | - | chr8_3:59664533-59664552 | None:intergenic | 35.0% | |
GTTTCAAAATTCCTGACTCT+TGG | - | chr8_3:59664617-59664636 | None:intergenic | 35.0% | |
GACTCAACAATCATATGGAA+AGG | - | chr8_3:59664667-59664686 | None:intergenic | 35.0% | |
AACAATTTCAGTCTGCTGTA+CGG | + | chr8_3:59664867-59664886 | Msa1298820:intron | 35.0% | |
! | AACAATACCTGCATTGATGT+TGG | - | chr8_3:59664914-59664933 | None:intergenic | 35.0% |
CTAAGTGGATCAACAAAGTT+TGG | - | chr8_3:59665037-59665056 | None:intergenic | 35.0% | |
! | ATTGATAACAACCACATCTC+TGG | - | chr8_3:59665258-59665277 | None:intergenic | 35.0% |
AGCACCTATTGTAGAAAAGA+TGG | + | chr8_3:59665298-59665317 | Msa1298820:intron | 35.0% | |
! | CCTACCATCTTTTCTACAAT+AGG | - | chr8_3:59665305-59665324 | None:intergenic | 35.0% |
CCTATTGTAGAAAAGATGGT+AGG | + | chr8_3:59665302-59665321 | Msa1298820:intron | 35.0% | |
TAGAAAAGATGGTAGGAACT+CGG | + | chr8_3:59665309-59665328 | Msa1298820:intron | 35.0% | |
AGGATCTAGAGATTAATGAG+TGG | + | chr8_3:59665461-59665480 | Msa1298820:intron | 35.0% | |
GGATCTAGAGATTAATGAGT+GGG | + | chr8_3:59665462-59665481 | Msa1298820:intron | 35.0% | |
CTCAAATGAATGTTCTAGCA+TGG | - | chr8_3:59665578-59665597 | None:intergenic | 35.0% | |
TATGTGTTCATCAAGACTTG+TGG | + | chr8_3:59665616-59665635 | Msa1298820:intron | 35.0% | |
! | ACCAAGCTTTTATTCCCTTA+TGG | + | chr8_3:59665808-59665827 | Msa1298820:intron | 35.0% |
! | CCAAGCTTTTATTCCCTTAT+GGG | + | chr8_3:59665809-59665828 | Msa1298820:intron | 35.0% |
! | GTAAACTCTTCATGGATTAC+TGG | - | chr8_3:59665901-59665920 | None:intergenic | 35.0% |
TAATCCATGAAGAGTTTACG+CGG | + | chr8_3:59665902-59665921 | Msa1298820:CDS | 35.0% | |
!!! | TGATTTTTTGGCATGAAGTC+GGG | + | chr8_3:59665977-59665996 | Msa1298820:intron | 35.0% |
TGTTTCTTCACTGTATCTCT+GGG | - | chr8_3:59666068-59666087 | None:intergenic | 35.0% | |
ATGTTTCTTCACTGTATCTC+TGG | - | chr8_3:59666069-59666088 | None:intergenic | 35.0% | |
! | GTCTATGGTCCCTTTAATTT+GGG | + | chr8_3:59666127-59666146 | Msa1298820:intron | 35.0% |
!! | TCTATGGTCCCTTTAATTTG+GGG | + | chr8_3:59666128-59666147 | Msa1298820:intron | 35.0% |
CCAAACATAGCCCTTATTAA+TGG | - | chr8_3:59666170-59666189 | None:intergenic | 35.0% | |
CCATTAATAAGGGCTATGTT+TGG | + | chr8_3:59666167-59666186 | Msa1298820:intron | 35.0% | |
AAGCTCCTATGCAAATTACT+AGG | - | chr8_3:59666212-59666231 | None:intergenic | 35.0% | |
AGAAACGTTGATCAATTAGG+AGG | - | chr8_3:59666541-59666560 | None:intergenic | 35.0% | |
GGCTCATATGAGTGTTATAT+AGG | + | chr8_3:59666646-59666665 | Msa1298820:intron | 35.0% | |
GAGTACATTAGAGAAGGAAA+TGG | + | chr8_3:59666835-59666854 | Msa1298820:intron | 35.0% | |
TTGCGAAAAAAAGAGAAAGG+TGG | + | chr8_3:59666870-59666889 | Msa1298820:intron | 35.0% | |
! | ATGATAACTTCTAGGTGTTG+GGG | + | chr8_3:59666955-59666974 | Msa1298820:intron | 35.0% |
! | GGTGGTGTTAAATGTATAAC+AGG | + | chr8_3:59666976-59666995 | Msa1298820:intron | 35.0% |
AATTTCAGTGATGAATCGGA+AGG | + | chr8_3:59667027-59667046 | Msa1298820:intron | 35.0% | |
AATGGAGACACAGTAAATGT+GGG | - | chr8_3:59667117-59667136 | None:intergenic | 35.0% | |
AAATGGAGACACAGTAAATG+TGG | - | chr8_3:59667118-59667137 | None:intergenic | 35.0% | |
! | GTCTCCATTTCTTTTTCTTG+TGG | + | chr8_3:59667128-59667147 | Msa1298820:intron | 35.0% |
ATTTACTTCCCAAAGCAAGA+TGG | + | chr8_3:59667375-59667394 | Msa1298820:CDS | 35.0% | |
TTTACTTCCCAAAGCAAGAT+GGG | + | chr8_3:59667376-59667395 | Msa1298820:CDS | 35.0% | |
CAAGAGGAAAATGAAGAGAT+TGG | + | chr8_3:59667430-59667449 | Msa1298820:CDS | 35.0% | |
AGATATATAGAATGTGGGGA+GGG | - | chr8_3:59667566-59667585 | None:intergenic | 35.0% | |
CAGCAGATATATAGAATGTG+GGG | - | chr8_3:59667570-59667589 | None:intergenic | 35.0% | |
GAGCTCAGAAATCAATTTGA+AGG | + | chr8_3:59667830-59667849 | Msa1298820:CDS | 35.0% | |
!!! | CTTACCTTGTTTTACACAAG+AGG | - | chr8_3:59668109-59668128 | None:intergenic | 35.0% |
CTCTTGTGTAAAACAAGGTA+AGG | + | chr8_3:59668107-59668126 | Msa1298820:intron | 35.0% | |
TGTTTAAAAAAAGGGCAACC+CGG | - | chr8_3:59668199-59668218 | None:intergenic | 35.0% | |
GGGAAATAATTCCCTATTAG+AGG | - | chr8_3:59668288-59668307 | None:intergenic | 35.0% | |
AGCAATACACTCTAAACTCT+GGG | - | chr8_3:59668308-59668327 | None:intergenic | 35.0% | |
TAGCAATACACTCTAAACTC+TGG | - | chr8_3:59668309-59668328 | None:intergenic | 35.0% | |
AGTATAGGGCTTAAGCTATT+GGG | - | chr8_3:59668481-59668500 | None:intergenic | 35.0% | |
AAGTATAGGGCTTAAGCTAT+TGG | - | chr8_3:59668482-59668501 | None:intergenic | 35.0% | |
TAGTATTATTGTGTGGGACT+TGG | + | chr8_3:59668519-59668538 | Msa1298820:intron | 35.0% | |
AGTATTATTGTGTGGGACTT+GGG | + | chr8_3:59668520-59668539 | Msa1298820:intron | 35.0% | |
CAACTCTGTAGAAAATGCTA+AGG | - | chr8_3:59668674-59668693 | None:intergenic | 35.0% | |
TACAGAGTTGCAGAAACATA+TGG | + | chr8_3:59668684-59668703 | Msa1298820:intron | 35.0% | |
!! | GTTTTGTTGAGGTCCTTAAA+GGG | - | chr8_3:59668888-59668907 | None:intergenic | 35.0% |
!!! | AGTTTTGTTGAGGTCCTTAA+AGG | - | chr8_3:59668889-59668908 | None:intergenic | 35.0% |
CTTAGGGAAAAGGCTTATAT+TGG | + | chr8_3:59668914-59668933 | Msa1298820:intron | 35.0% | |
TGCAGATACAGAGTGATATA+AGG | + | chr8_3:59668972-59668991 | Msa1298820:intron | 35.0% | |
! | TTGTTATTATTTCGCCAGAG+GGG | - | chr8_3:59669062-59669081 | None:intergenic | 35.0% |
!! | CTTTGTTATTATTTCGCCAG+AGG | - | chr8_3:59669064-59669083 | None:intergenic | 35.0% |
!!! | TTCGCATTTTTTATGGCGTT+AGG | + | chr8_3:59669167-59669186 | Msa1298820:intron | 35.0% |
ACGAAGCCCTTGAAAAATAA+CGG | - | chr8_3:59669236-59669255 | None:intergenic | 35.0% | |
TGTATGTGTGTCTTAGTCAT+TGG | + | chr8_3:59669355-59669374 | Msa1298820:intron | 35.0% | |
GTATGTGTGTCTTAGTCATT+GGG | + | chr8_3:59669356-59669375 | Msa1298820:intron | 35.0% | |
TGTGATTTACTATTGCTAGG+TGG | + | chr8_3:59669669-59669688 | Msa1298820:three_prime_UTR | 35.0% | |
TGAACATATGGAGTTGAACA+TGG | - | chr8_3:59669757-59669776 | None:intergenic | 35.0% | |
ATGTTCAACTCCATATGTTC+AGG | + | chr8_3:59669756-59669775 | Msa1298820:three_prime_UTR | 35.0% | |
TTGGGAGAGATGAAAATGAG+GGG | - | chr8_3:59660819-59660838 | None:intergenic | 40.0% | |
CTTGGGAGAGATGAAAATGA+GGG | - | chr8_3:59660820-59660839 | None:intergenic | 40.0% | |
TCTGACGCGAAGTTGAAAAA+CGG | - | chr8_3:59660934-59660953 | None:intergenic | 40.0% | |
AGCTGGAAAAACCCTAGAAT+CGG | - | chr8_3:59661006-59661025 | None:intergenic | 40.0% | |
GAGTGAAGTGTGAATGAGAA+AGG | - | chr8_3:59661079-59661098 | None:intergenic | 40.0% | |
CTTTCATTCTTCTCAACAGC+AGG | + | chr8_3:59661115-59661134 | Msa1298820:intron | 40.0% | |
GATTTCGGAGAACGATTTAC+CGG | + | chr8_3:59661143-59661162 | Msa1298820:CDS | 40.0% | |
AGTAAAACCTGAACGTGTTC+CGG | - | chr8_3:59661165-59661184 | None:intergenic | 40.0% | |
!! | TTCTACTTCAGCTGTCGTTT+TGG | - | chr8_3:59661441-59661460 | None:intergenic | 40.0% |
GCGAAGAGACAAAATCATTC+CGG | - | chr8_3:59661483-59661502 | None:intergenic | 40.0% | |
TTGCAGTCTTCAAGACTGTA+AGG | + | chr8_3:59661604-59661623 | Msa1298820:intron | 40.0% | |
CAGCAAAAAACAGAGGAAAC+AGG | - | chr8_3:59662261-59662280 | None:intergenic | 40.0% | |
GGGAAAACAGCAAAAAACAG+AGG | - | chr8_3:59662268-59662287 | None:intergenic | 40.0% | |
ACACGGTTCGTAAATAGGAT+CGG | - | chr8_3:59662415-59662434 | None:intergenic | 40.0% | |
ACGTAACACGGTTCGTAAAT+AGG | - | chr8_3:59662420-59662439 | None:intergenic | 40.0% | |
GTAAACATATCCTCTACGGT+TGG | + | chr8_3:59662598-59662617 | Msa1298820:intron | 40.0% | |
CTGATGATTTCAGTGCTTGA+AGG | - | chr8_3:59663031-59663050 | None:intergenic | 40.0% | |
ATCATCAGTAGAGTCCTTAG+CGG | + | chr8_3:59663043-59663062 | Msa1298820:CDS | 40.0% | |
! | ATAGTAAATCCTTTTCCCCC+AGG | + | chr8_3:59663318-59663337 | Msa1298820:intron | 40.0% |
CTCAAGTAGACAACGTGTTT+GGG | - | chr8_3:59663466-59663485 | None:intergenic | 40.0% | |
ACTCAAGTAGACAACGTGTT+TGG | - | chr8_3:59663467-59663486 | None:intergenic | 40.0% | |
!!! | AACGCTTATTTTGGACTGGA+GGG | - | chr8_3:59663517-59663536 | None:intergenic | 40.0% |
!!! | AAGCAACGCTTATTTTGGAC+TGG | - | chr8_3:59663521-59663540 | None:intergenic | 40.0% |
TAGAACAACTCCTAGAGTAC+TGG | - | chr8_3:59664180-59664199 | None:intergenic | 40.0% | |
ATGCTGAGACCAGAATGAAT+TGG | - | chr8_3:59664639-59664658 | None:intergenic | 40.0% | |
ACAATTTCAGTCTGCTGTAC+GGG | + | chr8_3:59664868-59664887 | Msa1298820:intron | 40.0% | |
AAATAAGCGTACCAGAGATG+TGG | + | chr8_3:59665244-59665263 | Msa1298820:intron | 40.0% | |
AGACCTCTAGCTATGTATTG+AGG | + | chr8_3:59665359-59665378 | Msa1298820:intron | 40.0% | |
TCTCCTCAATACATAGCTAG+AGG | - | chr8_3:59665365-59665384 | None:intergenic | 40.0% | |
TGTATTGAGGAGAGTAGATC+CGG | + | chr8_3:59665372-59665391 | Msa1298820:intron | 40.0% | |
TTATGCCATCGTTTGATCCA+TGG | + | chr8_3:59665503-59665522 | Msa1298820:intron | 40.0% | |
AAAAGTGGGATAGCGTTAGT+GGG | - | chr8_3:59665760-59665779 | None:intergenic | 40.0% | |
!! | ACTAACGCTATCCCACTTTT+GGG | + | chr8_3:59665760-59665779 | Msa1298820:intron | 40.0% |
! | AAAGCTTGGTAGTCAAATCC+CGG | - | chr8_3:59665798-59665817 | None:intergenic | 40.0% |
CCCATAAGGGAATAAAAGCT+TGG | - | chr8_3:59665812-59665831 | None:intergenic | 40.0% | |
ATAATTTCGGGAGCCCATAA+GGG | - | chr8_3:59665825-59665844 | None:intergenic | 40.0% | |
AATAATTTCGGGAGCCCATA+AGG | - | chr8_3:59665826-59665845 | None:intergenic | 40.0% | |
TTAACCGCGTAAACTCTTCA+TGG | - | chr8_3:59665909-59665928 | None:intergenic | 40.0% | |
TGAAGAGTTTACGCGGTTAA+AGG | + | chr8_3:59665909-59665928 | Msa1298820:CDS | 40.0% | |
CGTCTATGGTCCCTTTAATT+TGG | + | chr8_3:59666126-59666145 | Msa1298820:intron | 40.0% | |
ATTAGGGGCTCCCATTAATA+AGG | + | chr8_3:59666156-59666175 | Msa1298820:intron | 40.0% | |
TTAGGGGCTCCCATTAATAA+GGG | + | chr8_3:59666157-59666176 | Msa1298820:intron | 40.0% | |
! | ACGCACCTAGTAATTTGCAT+AGG | + | chr8_3:59666204-59666223 | Msa1298820:intron | 40.0% |
TATCTCGTGTATACGGTGTA+TGG | + | chr8_3:59666572-59666591 | Msa1298820:intron | 40.0% | |
TTTGTATGAGTTGTCCGACA+CGG | + | chr8_3:59666625-59666644 | Msa1298820:intron | 40.0% | |
!!! | TCTGAGTTGTGTTTGGCTTT+TGG | + | chr8_3:59667064-59667083 | Msa1298820:intron | 40.0% |
!! | GCTATGAAGGCGTCAATATT+AGG | - | chr8_3:59667095-59667114 | None:intergenic | 40.0% |
! | ACAGTAAATGTGGGCTATGA+AGG | - | chr8_3:59667108-59667127 | None:intergenic | 40.0% |
GGAAAAGGACACAAGACTAA+AGG | + | chr8_3:59667324-59667343 | Msa1298820:CDS | 40.0% | |
TTACTTCCCAAAGCAAGATG+GGG | + | chr8_3:59667377-59667396 | Msa1298820:CDS | 40.0% | |
GATATATAGAATGTGGGGAG+GGG | - | chr8_3:59667565-59667584 | None:intergenic | 40.0% | |
CAGATATATAGAATGTGGGG+AGG | - | chr8_3:59667567-59667586 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | + | chr8_3:59668058-59668077 | Msa1298820:intron | 40.0% | |
ACAGCCTCTTGTGTAAAACA+AGG | + | chr8_3:59668102-59668121 | Msa1298820:intron | 40.0% | |
GATGCGTACAATACACCAAA+TGG | + | chr8_3:59668129-59668148 | Msa1298820:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr8_3:59668133-59668152 | Msa1298820:intron | 40.0% | |
ATGTGTGGGTACCTCTAATA+GGG | + | chr8_3:59668274-59668293 | Msa1298820:intron | 40.0% | |
GAGTTGCAGAAACATATGGA+TGG | + | chr8_3:59668688-59668707 | Msa1298820:intron | 40.0% | |
CAGAGTGATATAAGGTGACT+TGG | + | chr8_3:59668980-59668999 | Msa1298820:intron | 40.0% | |
! | AGTGATATAAGGTGACTTGG+TGG | + | chr8_3:59668983-59669002 | Msa1298820:intron | 40.0% |
!! | TATAAGGTGACTTGGTGGTT+TGG | + | chr8_3:59668988-59669007 | Msa1298820:intron | 40.0% |
!! | ATAAGGTGACTTGGTGGTTT+GGG | + | chr8_3:59668989-59669008 | Msa1298820:intron | 40.0% |
CTAAGACACACATACAACCT+TGG | - | chr8_3:59669351-59669370 | None:intergenic | 40.0% | |
! | TAGTCATTGGGTTTTCTTGC+AGG | + | chr8_3:59669368-59669387 | Msa1298820:intron | 40.0% |
GCAAGGTAAATTAGACGAGA+AGG | + | chr8_3:59669401-59669420 | Msa1298820:CDS | 40.0% | |
AAAAAAGGCTCCAGAGAGAA+CGG | + | chr8_3:59669460-59669479 | Msa1298820:CDS | 40.0% | |
TGGTACTCATGATTCAGTCA+CGG | - | chr8_3:59669737-59669756 | None:intergenic | 40.0% | |
TGGGAGAGATGAAAATGAGG+GGG | - | chr8_3:59660818-59660837 | None:intergenic | 45.0% | |
GCTTGGGAGAGATGAAAATG+AGG | - | chr8_3:59660821-59660840 | None:intergenic | 45.0% | |
ATGAAAATTGGGCTTCGGCT+TGG | - | chr8_3:59660850-59660869 | None:intergenic | 45.0% | |
AAGTAGCTGTTGCTGGTACT+TGG | - | chr8_3:59660969-59660988 | None:intergenic | 45.0% | |
TCAGCTTCTCTCCGATTCTA+GGG | + | chr8_3:59660992-59661011 | Msa1298820:five_prime_UTR | 45.0% | |
AATTACGTCGTCGAGAGTTG+GGG | - | chr8_3:59661041-59661060 | None:intergenic | 45.0% | |
GAATTACGTCGTCGAGAGTT+GGG | - | chr8_3:59661042-59661061 | None:intergenic | 45.0% | |
AGAATTACGTCGTCGAGAGT+TGG | - | chr8_3:59661043-59661062 | None:intergenic | 45.0% | |
! | TGATTTTGTCTCTTCGCGAG+AGG | + | chr8_3:59661486-59661505 | Msa1298820:CDS | 45.0% |
GGACTGAATTAGAGAAAGGG+TGG | + | chr8_3:59661861-59661880 | Msa1298820:intron | 45.0% | |
TGCTCCTAGACATTGTAGTC+AGG | + | chr8_3:59662150-59662169 | Msa1298820:intron | 45.0% | |
CGATCCTGACTACAATGTCT+AGG | - | chr8_3:59662157-59662176 | None:intergenic | 45.0% | |
GTAAAGTCTAAGCACGGTCA+AGG | - | chr8_3:59662222-59662241 | None:intergenic | 45.0% | |
ACCGTGCTTAGACTTTACTC+CGG | + | chr8_3:59662224-59662243 | Msa1298820:intron | 45.0% | |
ACCGGAGTAAAGTCTAAGCA+CGG | - | chr8_3:59662228-59662247 | None:intergenic | 45.0% | |
GGTTCGTAAATAGGATCGGT+AGG | - | chr8_3:59662411-59662430 | None:intergenic | 45.0% | |
! | CGTGTTTTACGTTCGTTCAC+CGG | + | chr8_3:59662444-59662463 | Msa1298820:intron | 45.0% |
ATCGAGATCCTACGTAGGAT+CGG | - | chr8_3:59662474-59662493 | None:intergenic | 45.0% | |
CTCTCTCTCTCAATGTAGTC+AGG | - | chr8_3:59662497-59662516 | None:intergenic | 45.0% | |
AATGCACCATTCATACCTGC+TGG | + | chr8_3:59662838-59662857 | Msa1298820:CDS | 45.0% | |
ATGCACCATTCATACCTGCT+GGG | + | chr8_3:59662839-59662858 | Msa1298820:CDS | 45.0% | |
ACGTACAAACTAACCTGGTG+TGG | - | chr8_3:59662866-59662885 | None:intergenic | 45.0% | |
GCAAGAGATAGCAAAGCTGA+AGG | + | chr8_3:59663229-59663248 | Msa1298820:CDS | 45.0% | |
ATATTCTCTCCTGGGGGAAA+AGG | - | chr8_3:59663330-59663349 | None:intergenic | 45.0% | |
!!! | CAACGCTTATTTTGGACTGG+AGG | - | chr8_3:59663518-59663537 | None:intergenic | 45.0% |
TAAGCTCCGTAAAACATGGC+TGG | - | chr8_3:59663861-59663880 | None:intergenic | 45.0% | |
!! | TTGGCTTGAGTTGAGCTTTG+AGG | - | chr8_3:59664895-59664914 | None:intergenic | 45.0% |
ACTCAAGCCAACATCAATGC+AGG | + | chr8_3:59664904-59664923 | Msa1298820:CDS | 45.0% | |
GGATGATTTCATGCTAGGAC+CGG | + | chr8_3:59665153-59665172 | Msa1298820:intron | 45.0% | |
GAGGGTAGTGAAATCACTAG+AGG | + | chr8_3:59665397-59665416 | Msa1298820:intron | 45.0% | |
ATGTCTTATCCCACCAAGTG+GGG | - | chr8_3:59665535-59665554 | None:intergenic | 45.0% | |
CATGTCTTATCCCACCAAGT+GGG | - | chr8_3:59665536-59665555 | None:intergenic | 45.0% | |
CAAAAGTGGGATAGCGTTAG+TGG | - | chr8_3:59665761-59665780 | None:intergenic | 45.0% | |
! | CACTAACGCTATCCCACTTT+TGG | + | chr8_3:59665759-59665778 | Msa1298820:intron | 45.0% |
!! | CTAACGCTATCCCACTTTTG+GGG | + | chr8_3:59665761-59665780 | Msa1298820:intron | 45.0% |
CATAGACGACCCTCATCAAA+TGG | - | chr8_3:59666114-59666133 | None:intergenic | 45.0% | |
CATTTGATGAGGGTCGTCTA+TGG | + | chr8_3:59666112-59666131 | Msa1298820:intron | 45.0% | |
AACACTCATATGAGCCGTGT+CGG | - | chr8_3:59666642-59666661 | None:intergenic | 45.0% | |
!! | GTTATATAGGTGTCGGACAC+CGG | + | chr8_3:59666659-59666678 | Msa1298820:intron | 45.0% |
TTACTTCGACACTCCTAGAC+CGG | - | chr8_3:59666681-59666700 | None:intergenic | 45.0% | |
! | TACGAGTGTCATAGGAGTGT+CGG | + | chr8_3:59666753-59666772 | Msa1298820:intron | 45.0% |
!! | ATAACTTCTAGGTGTTGGGG+TGG | + | chr8_3:59666958-59666977 | Msa1298820:intron | 45.0% |
CAACTTCCCCATCTTGCTTT+GGG | - | chr8_3:59667386-59667405 | None:intergenic | 45.0% | |
CAAGATGGGGAAGTTGCTAA+TGG | + | chr8_3:59667390-59667409 | Msa1298820:CDS | 45.0% | |
ATTGGGCTTCAAGCTTCTGA+GGG | + | chr8_3:59667448-59667467 | Msa1298820:CDS | 45.0% | |
TGAGAATAGAGGGGTAACCT+TGG | + | chr8_3:59668022-59668041 | Msa1298820:intron | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr8_3:59668064-59668083 | Msa1298820:intron | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr8_3:59668065-59668084 | Msa1298820:intron | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8_3:59668098-59668117 | None:intergenic | 45.0% |
GCGTACAATACACCAAATGG+TGG | + | chr8_3:59668132-59668151 | Msa1298820:intron | 45.0% | |
CATGTGTGGGTACCTCTAAT+AGG | + | chr8_3:59668273-59668292 | Msa1298820:intron | 45.0% | |
GGATGGTTTGACCAATGATG+TGG | + | chr8_3:59668705-59668724 | Msa1298820:CDS | 45.0% | |
!! | TAAGGTGACTTGGTGGTTTG+GGG | + | chr8_3:59668990-59669009 | Msa1298820:intron | 45.0% |
! | TTGCAGGTTTTCATGCTGCA+AGG | + | chr8_3:59669384-59669403 | Msa1298820:intron | 45.0% |
AAAAAGGCTCCAGAGAGAAC+GGG | + | chr8_3:59669461-59669480 | Msa1298820:CDS | 45.0% | |
AAATGCAGCACGTAATGCCA+GGG | + | chr8_3:59669489-59669508 | Msa1298820:exon | 45.0% | |
AGTATCATCTCGTCAATCCC+TGG | - | chr8_3:59669509-59669528 | None:intergenic | 45.0% | |
TACTCATGATTCAGTCACGG+TGG | - | chr8_3:59669734-59669753 | None:intergenic | 45.0% | |
!!! | TATTTTATTTACATAATTTA+GGG | - | chr8_3:59661755-59661774 | None:intergenic | 5.0% |
!!! | TTATTTTATTTACATAATTT+AGG | - | chr8_3:59661756-59661775 | None:intergenic | 5.0% |
AGTAGGGTGGTCGAGAAGTA+TGG | + | chr8_3:59660773-59660792 | Msa1298820:five_prime_UTR | 50.0% | |
GTTGCTGGTACTTGGAGTAG+AGG | - | chr8_3:59660961-59660980 | None:intergenic | 50.0% | |
CTGAGTGAAGTAGCTGTTGC+TGG | - | chr8_3:59660976-59660995 | None:intergenic | 50.0% | |
CTCAGCTTCTCTCCGATTCT+AGG | + | chr8_3:59660991-59661010 | Msa1298820:five_prime_UTR | 50.0% | |
CGATTTACCGGAACACGTTC+AGG | + | chr8_3:59661155-59661174 | Msa1298820:CDS | 50.0% | |
GCTGAAGTAGAAGCTGCTTC+TGG | + | chr8_3:59661449-59661468 | Msa1298820:CDS | 50.0% | |
!! | GCTGCTTCTGGTGTTACAAC+CGG | + | chr8_3:59661461-59661480 | Msa1298820:CDS | 50.0% |
! | GGAAACGCTTGATTCGTGCT+TGG | + | chr8_3:59661625-59661644 | Msa1298820:CDS | 50.0% |
! | AAGCACGGTCAAGGTGCTTT+AGG | - | chr8_3:59662213-59662232 | None:intergenic | 50.0% |
GAAACAGGGCAAAGACGAAC+CGG | - | chr8_3:59662246-59662265 | None:intergenic | 50.0% | |
AGATCCTACGTAGGATCGGT+CGG | - | chr8_3:59662470-59662489 | None:intergenic | 50.0% | |
TCAGGATCGAGATCCTACGT+AGG | - | chr8_3:59662479-59662498 | None:intergenic | 50.0% | |
! | AGTAGAGTCCTTAGCGGATC+AGG | + | chr8_3:59663049-59663068 | Msa1298820:CDS | 50.0% |
ATTGAATGCACACTACGCCG+AGG | - | chr8_3:59663799-59663818 | None:intergenic | 50.0% | |
TGGGATGACCAGCGAAATGA+CGG | - | chr8_3:59664483-59664502 | None:intergenic | 50.0% | |
CTGTATGGAGTCCAAGAGTC+AGG | + | chr8_3:59664603-59664622 | Msa1298820:intron | 50.0% | |
AGATGGTAGGAACTCGGCTT+AGG | + | chr8_3:59665315-59665334 | Msa1298820:intron | 50.0% | |
GAACTCGGCTTAGGTGGTTT+GGG | + | chr8_3:59665324-59665343 | Msa1298820:intron | 50.0% | |
ATTGAGGAGAGTAGATCCGG+TGG | + | chr8_3:59665375-59665394 | Msa1298820:intron | 50.0% | |
GTGATTTCACTACCCTCCAC+CGG | - | chr8_3:59665394-59665413 | None:intergenic | 50.0% | |
TGGCTCCATGGATCAAACGA+TGG | - | chr8_3:59665511-59665530 | None:intergenic | 50.0% | |
CCATGTCTTATCCCACCAAG+TGG | - | chr8_3:59665537-59665556 | None:intergenic | 50.0% | |
! | CCACTTGGTGGGATAAGACA+TGG | + | chr8_3:59665534-59665553 | Msa1298820:intron | 50.0% |
ACGTGTCGTACGAGTGTCAT+AGG | + | chr8_3:59666745-59666764 | Msa1298820:intron | 50.0% | |
TGCGACACTCTTAGTCCTAG+AGG | + | chr8_3:59666780-59666799 | Msa1298820:intron | 50.0% | |
TATGAAGCACGGACACCTCT+AGG | - | chr8_3:59666798-59666817 | None:intergenic | 50.0% | |
! | CGGAGGGAGTACATTAGAGA+AGG | + | chr8_3:59666829-59666848 | Msa1298820:intron | 50.0% |
GCAACTTCCCCATCTTGCTT+TGG | - | chr8_3:59667387-59667406 | None:intergenic | 50.0% | |
GATTGGGCTTCAAGCTTCTG+AGG | + | chr8_3:59667447-59667466 | Msa1298820:CDS | 50.0% | |
! | GCTTCAAGCTTCTGAGGGAA+AGG | + | chr8_3:59667453-59667472 | Msa1298820:CDS | 50.0% |
CAACTTTACCAGTTGCGCCA+AGG | - | chr8_3:59668042-59668061 | None:intergenic | 50.0% | |
!! | AAGGTGACTTGGTGGTTTGG+GGG | + | chr8_3:59668991-59669010 | Msa1298820:intron | 50.0% |
ATGGGTTCAACTTACCCCTC+TGG | + | chr8_3:59669045-59669064 | Msa1298820:intron | 50.0% | |
ACAAAGCTTAGGGGCAGCAT+TGG | - | chr8_3:59669138-59669157 | None:intergenic | 50.0% | |
ATTTGCTCTCCCGTTCTCTC+TGG | - | chr8_3:59669473-59669492 | None:intergenic | 50.0% | |
CAAATGCAGCACGTAATGCC+AGG | + | chr8_3:59669488-59669507 | Msa1298820:exon | 50.0% | |
ATTCAGTCACGGTGGCGTAT+GGG | - | chr8_3:59669726-59669745 | None:intergenic | 50.0% | |
! | AGGGTGGTCGAGAAGTATGG+TGG | + | chr8_3:59660776-59660795 | Msa1298820:five_prime_UTR | 55.0% |
! | GGGTGGTCGAGAAGTATGGT+GGG | + | chr8_3:59660777-59660796 | Msa1298820:five_prime_UTR | 55.0% |
!! | TTCGGCTTGGTCTTGGGCTT+GGG | - | chr8_3:59660837-59660856 | None:intergenic | 55.0% |
!! | TTGGGCTTCGGCTTGGTCTT+GGG | - | chr8_3:59660843-59660862 | None:intergenic | 55.0% |
!! | ATTGGGCTTCGGCTTGGTCT+TGG | - | chr8_3:59660844-59660863 | None:intergenic | 55.0% |
TGGGGAAGACATGGTGAAGC+TGG | - | chr8_3:59661023-59661042 | None:intergenic | 55.0% | |
GTCGAGAGTTGGGGAAGACA+TGG | - | chr8_3:59661032-59661051 | None:intergenic | 55.0% | |
!! | AGGATCGAGTGCTGACTCGT+AGG | + | chr8_3:59662170-59662189 | Msa1298820:intron | 55.0% |
GTGGTCCCAGCAGGTATGAA+TGG | - | chr8_3:59662847-59662866 | None:intergenic | 55.0% | |
TGGCTGAACCTGATCCGCTA+AGG | - | chr8_3:59663060-59663079 | None:intergenic | 55.0% | |
TAACGTGCCCGTCATTTCGC+TGG | + | chr8_3:59664472-59664491 | Msa1298820:intron | 55.0% | |
GGGATGACCAGCGAAATGAC+GGG | - | chr8_3:59664482-59664501 | None:intergenic | 55.0% | |
TAGGACCGGTGATGTTGCGT+GGG | + | chr8_3:59665167-59665186 | Msa1298820:intron | 55.0% | |
TGGTAGGAACTCGGCTTAGG+TGG | + | chr8_3:59665318-59665337 | Msa1298820:intron | 55.0% | |
GGAACTCGGCTTAGGTGGTT+TGG | + | chr8_3:59665323-59665342 | Msa1298820:intron | 55.0% | |
AGGAGAGTAGATCCGGTGGA+GGG | + | chr8_3:59665379-59665398 | Msa1298820:intron | 55.0% | |
CTTATCCCACCAAGTGGGGT+TGG | - | chr8_3:59665531-59665550 | None:intergenic | 55.0% | |
GGTAGTCAAATCCCGGACAG+CGG | - | chr8_3:59665791-59665810 | None:intergenic | 55.0% | |
GACACTCGTACGACACGTGT+CGG | - | chr8_3:59666743-59666762 | None:intergenic | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr8_3:59668077-59668096 | Msa1298820:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | - | chr8_3:59668172-59668191 | None:intergenic | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | - | chr8_3:59668173-59668192 | None:intergenic | 55.0% | |
GATTCAGTCACGGTGGCGTA+TGG | - | chr8_3:59669727-59669746 | None:intergenic | 55.0% | |
!! | CTTCGGCTTGGTCTTGGGCT+TGG | - | chr8_3:59660838-59660857 | None:intergenic | 60.0% |
ATACCTGCTGGGACCACACC+AGG | + | chr8_3:59662850-59662869 | Msa1298820:CDS | 60.0% | |
TAACCTGGTGTGGTCCCAGC+AGG | - | chr8_3:59662856-59662875 | None:intergenic | 60.0% | |
CTAGGACCGGTGATGTTGCG+TGG | + | chr8_3:59665166-59665185 | Msa1298820:intron | 60.0% | |
ACCGGTGATGTTGCGTGGGA+CGG | + | chr8_3:59665171-59665190 | Msa1298820:intron | 60.0% | |
GAGGAGAGTAGATCCGGTGG+AGG | + | chr8_3:59665378-59665397 | Msa1298820:intron | 60.0% | |
TCCATGGAGCCAACCCCACT+TGG | + | chr8_3:59665519-59665538 | Msa1298820:intron | 60.0% | |
!! | ACCAAGTGGGGTTGGCTCCA+TGG | - | chr8_3:59665523-59665542 | None:intergenic | 60.0% |
ATGGAGCCAACCCCACTTGG+TGG | + | chr8_3:59665522-59665541 | Msa1298820:intron | 60.0% | |
TGGAGCCAACCCCACTTGGT+GGG | + | chr8_3:59665523-59665542 | Msa1298820:intron | 60.0% | |
!!! | CGCTATCCCACTTTTGGGGC+CGG | + | chr8_3:59665765-59665784 | Msa1298820:intron | 60.0% |
!! | TAGGTGTCGGACACCGGTCT+AGG | + | chr8_3:59666665-59666684 | Msa1298820:intron | 60.0% |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr8_3:59668031-59668050 | Msa1298820:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8_3:59668145-59668164 | Msa1298820:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | - | chr8_3:59668160-59668179 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr8_3:59668161-59668180 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr8_3:59668160-59668179 | Msa1298820:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr8_3:59668161-59668180 | Msa1298820:intron | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr8_3:59668177-59668196 | Msa1298820:intron | 60.0% |
!! | GTGACTTGGTGGTTTGGGGG+AGG | + | chr8_3:59668994-59669013 | Msa1298820:intron | 60.0% |
CCTACGTAGGATCGGTCGGC+CGG | - | chr8_3:59662466-59662485 | None:intergenic | 65.0% | |
CCCGTCCCACGCAACATCAC+CGG | - | chr8_3:59665175-59665194 | None:intergenic | 65.0% | |
CCGGTGATGTTGCGTGGGAC+GGG | + | chr8_3:59665172-59665191 | Msa1298820:intron | 65.0% | |
CGGTGATGTTGCGTGGGACG+GGG | + | chr8_3:59665173-59665192 | Msa1298820:intron | 65.0% | |
GATGTTGCGTGGGACGGGGA+CGG | + | chr8_3:59665177-59665196 | Msa1298820:intron | 65.0% | |
! | TGGGACGGGGACGGAGTGTT+GGG | + | chr8_3:59665186-59665205 | Msa1298820:intron | 65.0% |
GTCAAATCCCGGACAGCGGC+CGG | - | chr8_3:59665787-59665806 | None:intergenic | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr8_3:59668147-59668166 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | - | chr8_3:59668162-59668181 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr8_3:59668166-59668185 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr8_3:59668167-59668186 | None:intergenic | 65.0% | |
! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr8_3:59668178-59668197 | Msa1298820:intron | 65.0% |
CAGTCACGGTGGCGTATGGG+TGG | - | chr8_3:59669723-59669742 | None:intergenic | 65.0% | |
CCGGCCGACCGATCCTACGT+AGG | + | chr8_3:59662463-59662482 | Msa1298820:intron | 70.0% | |
GTGGGACGGGGACGGAGTGT+TGG | + | chr8_3:59665185-59665204 | Msa1298820:intron | 70.0% | |
!! | GGGACGGGGACGGAGTGTTG+GGG | + | chr8_3:59665187-59665206 | Msa1298820:intron | 70.0% |
!! | GGACGGGGACGGAGTGTTGG+GGG | + | chr8_3:59665188-59665207 | Msa1298820:intron | 70.0% |
!! | GACGGGGACGGAGTGTTGGG+GGG | + | chr8_3:59665189-59665208 | Msa1298820:intron | 70.0% |
!! | ACGGGGACGGAGTGTTGGGG+GGG | + | chr8_3:59665190-59665209 | Msa1298820:intron | 70.0% |
CAGCGGCCGGCCCCAAAAGT+GGG | - | chr8_3:59665774-59665793 | None:intergenic | 70.0% | |
ACAGCGGCCGGCCCCAAAAG+TGG | - | chr8_3:59665775-59665794 | None:intergenic | 70.0% | |
!!! | TTTTGGGGCCGGCCGCTGTC+CGG | + | chr8_3:59665776-59665795 | Msa1298820:intron | 70.0% |
!! | CGGGGACGGAGTGTTGGGGG+GGG | + | chr8_3:59665191-59665210 | Msa1298820:intron | 75.0% |
!! | GGGGACGGAGTGTTGGGGGG+GGG | + | chr8_3:59665192-59665211 | Msa1298820:intron | 75.0% |
!! | GGGACGGAGTGTTGGGGGGG+GGG | + | chr8_3:59665193-59665212 | Msa1298820:intron | 75.0% |
!! | GGACGGAGTGTTGGGGGGGG+GGG | + | chr8_3:59665194-59665213 | Msa1298820:intron | 75.0% |
!! | GACGGAGTGTTGGGGGGGGG+GGG | + | chr8_3:59665195-59665214 | Msa1298820:intron | 75.0% |
!! | ACGGAGTGTTGGGGGGGGGG+GGG | + | chr8_3:59665196-59665215 | Msa1298820:intron | 75.0% |
! | TTTGGGGCCGGCCGCTGTCC+GGG | + | chr8_3:59665777-59665796 | Msa1298820:intron | 75.0% |
!!! | CGGAGTGTTGGGGGGGGGGG+GGG | + | chr8_3:59665197-59665216 | Msa1298820:intron | 80.0% |
!!! | GGAGTGTTGGGGGGGGGGGG+GGG | + | chr8_3:59665198-59665217 | Msa1298820:intron | 80.0% |
!!! | GAGTGTTGGGGGGGGGGGGG+GGG | + | chr8_3:59665199-59665218 | Msa1298820:intron | 80.0% |
!! | AGTGTTGGGGGGGGGGGGGG+GGG | + | chr8_3:59665200-59665219 | Msa1298820:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 59660760 | 59669810 | 59660760 | ID=Msa1298820;Name=Msa1298820 |
chr8_3 | mRNA | 59660760 | 59669810 | 59660760 | ID=Msa1298820-mRNA-1;Parent=Msa1298820;Name=Msa1298820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=271|1|1|1|1|1|14|307|327 |
chr8_3 | exon | 59660760 | 59661054 | 59660760 | ID=Msa1298820-mRNA-1:exon:17289;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59661134 | 59661176 | 59661134 | ID=Msa1298820-mRNA-1:exon:17290;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59661267 | 59661340 | 59661267 | ID=Msa1298820-mRNA-1:exon:17291;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59661437 | 59661507 | 59661437 | ID=Msa1298820-mRNA-1:exon:17292;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59661610 | 59661646 | 59661610 | ID=Msa1298820-mRNA-1:exon:17293;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59662784 | 59662871 | 59662784 | ID=Msa1298820-mRNA-1:exon:17294;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59663006 | 59663070 | 59663006 | ID=Msa1298820-mRNA-1:exon:17295;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59663173 | 59663250 | 59663173 | ID=Msa1298820-mRNA-1:exon:17296;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59664878 | 59664925 | 59664878 | ID=Msa1298820-mRNA-1:exon:17297;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59665877 | 59665930 | 59665877 | ID=Msa1298820-mRNA-1:exon:17298;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59667313 | 59667474 | 59667313 | ID=Msa1298820-mRNA-1:exon:17299;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59667782 | 59667851 | 59667782 | ID=Msa1298820-mRNA-1:exon:17300;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59668689 | 59668744 | 59668689 | ID=Msa1298820-mRNA-1:exon:17301;Parent=Msa1298820-mRNA-1 |
chr8_3 | exon | 59669390 | 59669810 | 59669390 | ID=Msa1298820-mRNA-1:exon:17302;Parent=Msa1298820-mRNA-1 |
chr8_3 | five_prime_UTR | 59660760 | 59661030 | 59660760 | ID=Msa1298820-mRNA-1:five_prime_utr;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59661031 | 59661054 | 59661031 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59661134 | 59661176 | 59661134 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59661267 | 59661340 | 59661267 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59661437 | 59661507 | 59661437 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59661610 | 59661646 | 59661610 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59662784 | 59662871 | 59662784 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59663006 | 59663070 | 59663006 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59663173 | 59663250 | 59663173 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59664878 | 59664925 | 59664878 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59665877 | 59665930 | 59665877 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59667313 | 59667474 | 59667313 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59667782 | 59667851 | 59667782 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59668689 | 59668744 | 59668689 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | CDS | 59669390 | 59669503 | 59669390 | ID=Msa1298820-mRNA-1:cds;Parent=Msa1298820-mRNA-1 |
chr8_3 | three_prime_UTR | 59669504 | 59669810 | 59669504 | ID=Msa1298820-mRNA-1:three_prime_utr;Parent=Msa1298820-mRNA-1 |
Gene Sequence |
Protein sequence |