AlfalfaGEDB | Msa0971800

M. sativa cultivar zhongmu-4 / Msa0971800

KEGG: -
GO: GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0009505 GO:0009506 GO:0030054 GO:0030312 GO:0044464 GO:0055044 GO:0071944
PFAM: PF00657.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0971800	XP_024641257.1	67.686	229	17	2	3	174	153	381	1.36e-94	289

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0971800	sp\|Q9LY84\|GDL76_ARATH	36.937	222	80	4	12	173	165	386	8.93e-41	144

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0971800	A0A396H961	67.982	228	16	2	4	174	235	462	1.91e-94	291

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0030730	Msa0971800	0.805123	1.554173e-49	-8.615850e-47
Msa0032120	Msa0971800	0.805245	1.465248e-49	-8.615850e-47
Msa0037820	Msa0971800	0.800286	1.547824e-48	-8.615850e-47
Msa0038350	Msa0971800	-0.821535	3.834217e-53	-8.615850e-47
Msa0050940	Msa0971800	0.802059	6.712814e-49	-8.615850e-47
Msa0073820	Msa0971800	0.812828	3.482531e-51	-8.615850e-47
Msa0091770	Msa0971800	0.815947	7.120020e-52	-8.615850e-47
Msa0094100	Msa0971800	0.802369	5.795928e-49	-8.615850e-47
Msa0101320	Msa0971800	-0.807695	4.457169e-50	-8.615850e-47
Msa0105420	Msa0971800	0.819009	1.454277e-52	-8.615850e-47
Msa0120330	Msa0971800	0.802951	4.397377e-49	-8.615850e-47
Msa0605620	Msa0971800	0.800964	1.125833e-48	-8.615850e-47
Msa0619330	Msa0971800	0.827603	1.428451e-54	-8.615850e-47
Msa0663090	Msa0971800	0.819213	1.306929e-52	-8.615850e-47
Msa0677820	Msa0971800	0.803447	3.471838e-49	-8.615850e-47
Msa0681890	Msa0971800	0.813115	3.013711e-51	-8.615850e-47
Msa0707780	Msa0971800	0.811620	6.392264e-51	-8.615850e-47
Msa0726610	Msa0971800	0.806398	8.387407e-50	-8.615850e-47
Msa0730180	Msa0971800	0.818820	1.605292e-52	-8.615850e-47
Msa0740420	Msa0971800	0.801099	1.056577e-48	-8.615850e-47
Msa0756480	Msa0971800	0.803600	3.226847e-49	-8.615850e-47
Msa0760890	Msa0971800	0.802188	6.315497e-49	-8.615850e-47
Msa0770430	Msa0971800	0.818960	1.492276e-52	-8.615850e-47
Msa0780140	Msa0971800	0.806068	9.844588e-50	-8.615850e-47
Msa0792510	Msa0971800	0.806722	7.165553e-50	-8.615850e-47
Msa0842230	Msa0971800	0.809014	2.332525e-50	-8.615850e-47
Msa0135980	Msa0971800	0.802450	5.579356e-49	-8.615850e-47
Msa0141670	Msa0971800	0.810283	1.244839e-50	-8.615850e-47
Msa0149500	Msa0971800	0.802714	4.921800e-49	-8.615850e-47
Msa0162050	Msa0971800	0.801352	9.378609e-49	-8.615850e-47
Msa0162070	Msa0971800	0.804404	2.195375e-49	-8.615850e-47
Msa0168100	Msa0971800	0.804396	2.204518e-49	-8.615850e-47
Msa0170680	Msa0971800	0.807760	4.318448e-50	-8.615850e-47
Msa0171780	Msa0971800	0.816826	4.526585e-52	-8.615850e-47
Msa0183610	Msa0971800	0.816706	4.815678e-52	-8.615850e-47
Msa0196130	Msa0971800	-0.801973	6.993155e-49	-8.615850e-47
Msa0197230	Msa0971800	0.800338	1.510697e-48	-8.615850e-47
Msa0207000	Msa0971800	0.822007	2.981935e-53	-8.615850e-47
Msa0207180	Msa0971800	0.803693	3.085751e-49	-8.615850e-47
Msa0213080	Msa0971800	0.805668	1.194441e-49	-8.615850e-47
Msa0371610	Msa0971800	0.814082	1.846295e-51	-8.615850e-47
Msa0374070	Msa0971800	0.824773	6.730495e-54	-8.615850e-47
Msa0376510	Msa0971800	0.808465	3.055590e-50	-8.615850e-47
Msa0378340	Msa0971800	0.809988	1.441122e-50	-8.615850e-47
Msa0380310	Msa0971800	0.811129	8.170462e-51	-8.615850e-47
Msa0413740	Msa0971800	0.802702	4.949990e-49	-8.615850e-47
Msa0423250	Msa0971800	0.825901	3.640184e-54	-8.615850e-47
Msa0425050	Msa0971800	0.811350	7.315814e-51	-8.615850e-47
Msa0427690	Msa0971800	0.812832	3.475889e-51	-8.615850e-47
Msa0431430	Msa0971800	0.806090	9.737075e-50	-8.615850e-47
Msa0436460	Msa0971800	0.813001	3.192551e-51	-8.615850e-47
Msa0469390	Msa0971800	0.815960	7.070994e-52	-8.615850e-47
Msa0257310	Msa0971800	0.802789	4.748856e-49	-8.615850e-47
Msa0265820	Msa0971800	0.821929	3.109359e-53	-8.615850e-47
Msa0267760	Msa0971800	0.804066	2.581540e-49	-8.615850e-47
Msa0269360	Msa0971800	0.819585	1.075306e-52	-8.615850e-47
Msa0289890	Msa0971800	0.824811	6.593574e-54	-8.615850e-47
Msa0296610	Msa0971800	0.813943	1.981671e-51	-8.615850e-47
Msa0298940	Msa0971800	0.805504	1.292748e-49	-8.615850e-47
Msa0298970	Msa0971800	0.818239	2.174180e-52	-8.615850e-47
Msa0308830	Msa0971800	0.806830	6.799537e-50	-8.615850e-47
Msa0315480	Msa0971800	0.802699	4.956057e-49	-8.615850e-47
Msa0342200	Msa0971800	0.812446	4.222136e-51	-8.615850e-47
Msa0490300	Msa0971800	0.803563	3.284216e-49	-8.615850e-47
Msa0505390	Msa0971800	0.800837	1.194818e-48	-8.615850e-47
Msa0509970	Msa0971800	0.804583	2.014460e-49	-8.615850e-47
Msa0516450	Msa0971800	0.802217	6.228495e-49	-8.615850e-47
Msa0518520	Msa0971800	0.809998	1.433927e-50	-8.615850e-47
Msa0524120	Msa0971800	0.807008	6.235268e-50	-8.615850e-47
Msa0525240	Msa0971800	0.809878	1.521694e-50	-8.615850e-47
Msa0526640	Msa0971800	-0.818306	2.099695e-52	-8.615850e-47
Msa0526710	Msa0971800	0.803343	3.647125e-49	-8.615850e-47
Msa0530930	Msa0971800	0.802687	4.983907e-49	-8.615850e-47
Msa0546840	Msa0971800	0.808570	2.902812e-50	-8.615850e-47
Msa0574170	Msa0971800	0.824534	7.660609e-54	-8.615850e-47
Msa0576420	Msa0971800	0.821962	3.054862e-53	-8.615850e-47
Msa0591770	Msa0971800	0.803132	4.032590e-49	-8.615850e-47
Msa0843690	Msa0971800	0.814731	1.326682e-51	-8.615850e-47
Msa0848360	Msa0971800	0.803439	3.484360e-49	-8.615850e-47
Msa0848380	Msa0971800	0.825999	3.450477e-54	-8.615850e-47
Msa0873190	Msa0971800	0.818964	1.488689e-52	-8.615850e-47
Msa0890250	Msa0971800	0.837138	6.202571e-57	-8.615850e-47
Msa0896210	Msa0971800	0.820294	7.402772e-53	-8.615850e-47
Msa0901880	Msa0971800	0.812940	3.292104e-51	-8.615850e-47
Msa0909710	Msa0971800	0.801370	9.298463e-49	-8.615850e-47
Msa0925160	Msa0971800	0.808875	2.498611e-50	-8.615850e-47
Msa0935730	Msa0971800	0.813518	2.458556e-51	-8.615850e-47
Msa0937940	Msa0971800	0.831121	1.997841e-55	-8.615850e-47
Msa0952950	Msa0971800	0.804504	2.093111e-49	-8.615850e-47
Msa0955260	Msa0971800	0.802865	4.579839e-49	-8.615850e-47
Msa0962880	Msa0971800	0.810200	1.297412e-50	-8.615850e-47
Msa0969700	Msa0971800	0.802786	4.756491e-49	-8.615850e-47
Msa0971800	Msa0975580	0.806116	9.618753e-50	-8.615850e-47
Msa0971800	Msa0980440	0.804108	2.530200e-49	-8.615850e-47
Msa0971800	Msa1000470	0.809837	1.553426e-50	-8.615850e-47
Msa0971800	Msa1008490	0.815671	8.201953e-52	-8.615850e-47
Msa0971800	Msa1009620	0.834642	2.663196e-56	-8.615850e-47
Msa0971800	Msa1009640	0.842675	2.237386e-58	-8.615850e-47
Msa0971800	Msa1016670	0.808198	3.484441e-50	-8.615850e-47
Msa0971800	Msa1018790	0.801858	7.384183e-49	-8.615850e-47
Msa0971800	Msa1036390	0.807836	4.160018e-50	-8.615850e-47
Msa0971800	Msa1055260	0.817069	3.992368e-52	-8.615850e-47
Msa0971800	Msa1055280	0.817784	2.756118e-52	-8.615850e-47
Msa0971800	Msa1073840	0.821664	3.580841e-53	-8.615850e-47
Msa0971800	Msa1076680	0.808981	2.371403e-50	-8.615850e-47
Msa0971800	Msa1099030	0.803143	4.013127e-49	-8.615850e-47
Msa0971800	Msa1102540	0.809727	1.640050e-50	-8.615850e-47
Msa0971800	Msa1105290	0.817111	3.905872e-52	-8.615850e-47
Msa0971800	Msa1106560	0.830372	3.047593e-55	-8.615850e-47
Msa0971800	Msa1107970	0.810850	9.388994e-51	-8.615850e-47
Msa0971800	Msa1125780	0.818581	1.818944e-52	-8.615850e-47
Msa0971800	Msa1125950	0.814493	1.498170e-51	-8.615850e-47
Msa0971800	Msa1151960	0.807941	3.951730e-50	-8.615850e-47
Msa0971800	Msa1171340	0.809620	1.729625e-50	-8.615850e-47
Msa0971800	Msa1171690	0.819049	1.424453e-52	-8.615850e-47
Msa0971800	Msa1183390	0.806732	7.130673e-50	-8.615850e-47
Msa0971800	Msa1184730	0.813314	2.725710e-51	-8.615850e-47
Msa0971800	Msa1190910	0.815124	1.085806e-51	-8.615850e-47
Msa0971800	Msa1201990	0.819651	1.038646e-52	-8.615850e-47
Msa0971800	Msa1208980	0.806724	7.157122e-50	-8.615850e-47
Msa0971800	Msa1237030	0.805524	1.280594e-49	-8.615850e-47
Msa0971800	Msa1246740	0.814486	1.503762e-51	-8.615850e-47
Msa0971800	Msa1262310	0.802936	4.428647e-49	-8.615850e-47
Msa0971800	Msa1280130	0.802663	5.040758e-49	-8.615850e-47
Msa0971800	Msa1281720	0.820190	7.816340e-53	-8.615850e-47
Msa0971800	Msa1302150	0.839778	1.292915e-57	-8.615850e-47
Msa0971800	Msa1309240	0.803410	3.532185e-49	-8.615850e-47
Msa0971800	Msa1309360	0.806997	6.267748e-50	-8.615850e-47
Msa0971800	Msa1310110	0.802738	4.865562e-49	-8.615850e-47
Msa0971800	Msa1321000	0.830136	3.479882e-55	-8.615850e-47
Msa0971800	Msa1323060	0.805199	1.498183e-49	-8.615850e-47
Msa0971800	Msa1329990	0.818673	1.733977e-52	-8.615850e-47
Msa0971800	Msa1355260	0.814105	1.824644e-51	-8.615850e-47
Msa0971800	Msa1373950	0.801523	8.648229e-49	-8.615850e-47
Msa0971800	Msa1379990	0.818307	2.098993e-52	-8.615850e-47
Msa0971800	Msa1385620	0.822960	1.790645e-53	-8.615850e-47
Msa0971800	Msa1385900	0.806410	8.339328e-50	-8.615850e-47
Msa0971800	Msa1412520	0.812087	5.057351e-51	-8.615850e-47
Msa0971800	Msa1418200	0.802463	5.545221e-49	-8.615850e-47
Msa0971800	Msa1429250	0.809159	2.171814e-50	-8.615850e-47
Msa0971800	Msa1435040	0.804839	1.781968e-49	-8.615850e-47
Msa0971800	Msa1435670	0.831582	1.538052e-55	-8.615850e-47
Msa0971800	Msa1464560	0.825342	4.940002e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0971800	MtrunA17_Chr6g0450711	67.982	228	16	2	4	174	235	462	3.68e-98	291
Msa0971800	MtrunA17_Chr6g0450721	61.395	215	39	4	4	174	146	360	7.00e-79	238
Msa0971800	MtrunA17_Chr6g0450701	55.217	230	45	3	1	173	150	378	1.83e-76	233
Msa0971800	MtrunA17_Chr6g0450731	56.561	221	46	4	4	174	142	362	1.08e-72	223
Msa0971800	MtrunA17_Chr8g0352901	49.345	229	54	4	7	173	144	372	3.17e-64	201
Msa0971800	MtrunA17_Chr7g0226941	38.288	222	77	4	12	173	157	378	3.99e-44	149
Msa0971800	MtrunA17_Chr7g0226931	35.965	228	81	3	11	173	171	398	8.96e-42	144
Msa0971800	MtrunA17_Chr7g0226911	33.929	224	83	3	15	173	161	384	1.71e-38	135
Msa0971800	MtrunA17_Chr8g0339251	43.956	182	40	4	19	138	142	323	1.40e-36	129
Msa0971800	MtrunA17_Chr7g0254461	34.361	227	85	5	11	173	165	391	4.95e-36	129
Msa0971800	MtrunA17_Chr8g0381581	34.649	228	85	5	11	174	161	388	8.10e-36	128
Msa0971800	MtrunA17_Chr1g0159971	36.607	224	81	6	11	173	168	391	2.97e-35	127
Msa0971800	MtrunA17_Chr1g0159981	35.268	224	84	6	11	173	167	390	8.81e-35	125
Msa0971800	MtrunA17_Chr1g0159991	34.375	224	86	6	11	173	157	380	6.02e-34	123
Msa0971800	MtrunA17_Chr1g0160031	33.784	222	88	6	11	173	160	381	1.58e-33	122
Msa0971800	MtrunA17_Chr1g0160011	34.685	222	86	6	11	173	161	382	6.21e-33	120
Msa0971800	MtrunA17_Chr1g0160101	33.929	224	87	5	11	173	164	387	9.30e-33	120
Msa0971800	MtrunA17_Chr7g0273101	30.734	218	88	4	11	165	149	366	1.22e-26	103
Msa0971800	MtrunA17_Chr7g0275291	28.378	222	96	4	15	173	154	375	4.87e-24	96.7
Msa0971800	MtrunA17_Chr7g0271551	31.100	209	90	5	19	173	156	364	1.83e-22	92.0
Msa0971800	MtrunA17_Chr8g0347751	26.852	216	101	5	15	173	167	382	7.76e-20	85.1
Msa0971800	MtrunA17_Chr8g0339231	70.833	48	14	0	16	63	8	55	2.28e-18	75.5
Msa0971800	MtrunA17_Chr2g0283481	26.733	202	93	6	19	165	179	380	2.54e-14	69.7
Msa0971800	MtrunA17_Chr2g0283511	29.688	128	68	2	60	165	239	366	3.03e-13	66.6
Msa0971800	MtrunA17_Chr2g0317271	30.579	121	62	2	63	165	233	349	1.16e-12	64.7
Msa0971800	MtrunA17_Chr3g0104821	29.545	132	66	3	61	165	247	378	1.19e-12	64.7
Msa0971800	MtrunA17_Chr3g0104831	29.545	132	66	3	61	165	166	297	1.41e-12	64.3
Msa0971800	MtrunA17_Chr4g0057991	24.121	199	99	5	19	165	169	367	1.73e-12	64.3
Msa0971800	MtrunA17_Chr0c01g0489571	30.579	121	62	2	63	165	233	349	2.04e-12	63.9
Msa0971800	MtrunA17_Chr0c01g0489581	30.579	121	62	2	63	165	233	349	2.08e-12	63.9
Msa0971800	MtrunA17_Chr2g0317261	29.752	121	63	2	63	165	233	349	4.69e-12	63.2
Msa0971800	MtrunA17_Chr5g0405821	25.773	194	92	6	22	164	173	365	1.43e-11	61.6
Msa0971800	MtrunA17_Chr3g0112821	29.839	124	66	2	63	165	233	356	2.94e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0971800	AT3G27950.1	37.281	228	87	4	2	173	143	370	2.86e-42	145
Msa0971800	AT5G14450.1	36.937	222	80	4	12	173	165	386	9.08e-42	144
Msa0971800	AT1G67830.1	33.480	227	79	6	11	173	151	369	1.92e-33	122
Msa0971800	AT3G26430.1	33.040	227	88	5	11	173	152	378	3.85e-33	121
Msa0971800	AT1G54790.1	29.439	214	88	4	15	165	155	368	6.93e-25	99.4
Msa0971800	AT1G54790.3	29.439	214	88	4	15	165	156	369	7.52e-25	99.4
Msa0971800	AT1G56670.1	28.502	207	94	5	21	173	165	371	4.85e-19	83.2
Msa0971800	AT1G09390.1	28.311	219	101	6	10	173	151	368	5.74e-17	77.4
Msa0971800	AT3G62280.1	24.645	211	102	3	12	165	147	357	1.42e-15	73.6
Msa0971800	AT3G16370.1	30.702	114	58	2	71	163	237	350	5.13e-11	60.5
Msa0971800	AT1G28600.1	26.923	130	69	3	69	174	244	371	6.78e-11	60.1

Find 68 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCCTTCTCAACATATTATT+TGG	0.059638	6_4:+3887953	Msa0971800:CDS
GAGAATTGGCTCAATATTTC+AGG	0.217022	6_4:-3886795	None:intergenic
CATATCAACATATGTAAATT+TGG	0.224374	6_4:-3887368	None:intergenic
GCACTTTACACGATTGATAT+TGG	0.249985	6_4:+3886711	Msa0971800:CDS
CTTTCATTGGATGGTGAAAT+TGG	0.265823	6_4:+3886610	Msa0971800:five_prime_UTR
AATCAATTGGTTTGCCCTTT+GGG	0.267392	6_4:-3887992	None:intergenic
CCTTCACTGCTTGGGAGAAT+TGG	0.284156	6_4:-3886809	None:intergenic
CAATCAATTGGTTTGCCCTT+TGG	0.302687	6_4:-3887993	None:intergenic
GGGTCGAAAGAAATAATAAA+TGG	0.334127	6_4:+3887904	Msa0971800:CDS
TCCTTCTCAACATATTATTT+GGG	0.344874	6_4:+3887954	Msa0971800:CDS
ACTCAGTTGGATCAAATTAC+AGG	0.349530	6_4:+3886401	Msa0971800:five_prime_UTR
GTTTCTGTTATGCCTTTCAT+TGG	0.356771	6_4:+3886597	Msa0971800:five_prime_UTR
TATAAACATGCCTTTCCAAT+TGG	0.363564	6_4:-3888057	None:intergenic
TCACACAGCCATTGGCATCT+AGG	0.375766	6_4:-3887264	None:intergenic
ACCAATTACCTTCACTGCTT+GGG	0.379470	6_4:-3886817	None:intergenic
CTGAAAGGTGGTTCTGTCCC+TGG	0.384991	6_4:-3886654	None:intergenic
TTCAAATATGCACTTAGATA+TGG	0.393985	6_4:-3886379	None:intergenic
TTAGAGAAGTCCTCAGGCCT+TGG	0.403328	6_4:-3886687	None:intergenic
TACCAATTACCTTCACTGCT+TGG	0.412142	6_4:-3886818	None:intergenic
CTGTTATGCCTTTCATTGGA+TGG	0.432390	6_4:+3886601	Msa0971800:five_prime_UTR
TCTGATCCACTAGTTCCAAT+TGG	0.434561	6_4:+3888042	Msa0971800:CDS
CCCACAGTTTATGCGGTAAC+CGG	0.438889	6_4:-3887884	None:intergenic
AAGGCCTGAGGACTTCTCTA+AGG	0.441215	6_4:+3886689	Msa0971800:CDS
GGACAAAATGATCTTGCCTA+TGG	0.441492	6_4:+3886732	Msa0971800:CDS
CTGAGGTTTCACACAGCCAT+TGG	0.446840	6_4:-3887272	None:intergenic
GCCTTTCCAATTGGAACTAG+TGG	0.455838	6_4:-3888048	None:intergenic
TCCCTGGATTATCATTCATC+AGG	0.461881	6_4:-3886638	None:intergenic
GGTTATAGTCCATTCCATCT+TGG	0.474909	6_4:+3886469	Msa0971800:five_prime_UTR
AGTGCATATTTGAACTCAGT+TGG	0.477818	6_4:+3886388	Msa0971800:five_prime_UTR
GAGTTGATTAAACAGAATCT+TGG	0.487683	6_4:-3886530	None:intergenic
TTCTCCTTAGTTGAGACACT+TGG	0.492575	6_4:-3887333	None:intergenic
TCTCAACATATTATTTGGGA+TGG	0.499807	6_4:+3887958	Msa0971800:CDS
AGGACCAAGTGTCTCAACTA+AGG	0.502878	6_4:+3887329	Msa0971800:CDS
GGAATTTAACAAGAAGCTAA+AGG	0.504493	6_4:+3887309	Msa0971800:CDS
ACCTCAGAACAAAATAGCTC+AGG	0.506068	6_4:+3887288	Msa0971800:CDS
ACTAAGGAGAAAACTCTCAT+TGG	0.506960	6_4:+3887345	Msa0971800:CDS
TGTTGAGAAGGATTTGTACA+TGG	0.513121	6_4:-3887943	None:intergenic
CTTTCAGAAGTGGTCTTCCA+AGG	0.523672	6_4:+3886670	Msa0971800:CDS
TGCGCCGCCTACTGCAAAGT+TGG	0.531948	6_4:-3886431	None:intergenic
GGTGCCAACTTTGCAGTAGG+CGG	0.542884	6_4:+3886427	Msa0971800:five_prime_UTR
TTCTGTTGCGGCAGTTACAC+CGG	0.546226	6_4:+3887865	Msa0971800:intron
ACTTGAAGTCCAAGATGGAA+TGG	0.549121	6_4:-3886478	None:intergenic
CCAATTCTCCCAAGCAGTGA+AGG	0.558153	6_4:+3886809	Msa0971800:CDS
GAGATACTTGAAGTCCAAGA+TGG	0.559373	6_4:-3886483	None:intergenic
CATGGTGCCAACTTTGCAGT+AGG	0.564240	6_4:+3886424	Msa0971800:five_prime_UTR
TGAAGTGTGTAGAAAACCAT+AGG	0.567213	6_4:-3886748	None:intergenic
TCCCAAATAATATGTTGAGA+AGG	0.567571	6_4:-3887955	None:intergenic
CTTCAGAAGAACAAGTTCAA+AGG	0.572401	6_4:+3886766	Msa0971800:CDS
CAATTTCACCATCCAATGAA+AGG	0.574883	6_4:-3886609	None:intergenic
CTTGGAAGACCACTTCTGAA+AGG	0.575301	6_4:-3886669	None:intergenic
TCCTGATGAATGATAATCCA+GGG	0.590905	6_4:+3886637	Msa0971800:exon
AGTGCCTTAGAGAAGTCCTC+AGG	0.595311	6_4:-3886693	None:intergenic
ACCGGTTACCGCATAAACTG+TGG	0.597247	6_4:+3887883	Msa0971800:CDS
GGAAGACCACTTCTGAAAGG+TGG	0.597962	6_4:-3886666	None:intergenic
CTTTCGACCCACAGTTTATG+CGG	0.600345	6_4:-3887891	None:intergenic
TGGCATACACTACTCCCAAA+GGG	0.602848	6_4:+3887978	Msa0971800:CDS
TGGAACTAGTGGATCAGAGA+AGG	0.606975	6_4:-3888037	None:intergenic
TTCCTGATGAATGATAATCC+AGG	0.607224	6_4:+3886636	Msa0971800:exon
AGTAATGAAATGCAAAGATG+AGG	0.609698	6_4:-3886573	None:intergenic
ATGGCATACACTACTCCCAA+AGG	0.610391	6_4:+3887977	Msa0971800:CDS
GTTGGATCAAATTACAGGCA+TGG	0.611082	6_4:+3886406	Msa0971800:five_prime_UTR
ACAGAACCACCTTTCAGAAG+TGG	0.611973	6_4:+3886660	Msa0971800:CDS
TCCACTAGTTCCAATTGGAA+AGG	0.616018	6_4:+3888047	Msa0971800:CDS
AAGGGTAACCTAGATGCCAA+TGG	0.648087	6_4:+3887256	Msa0971800:CDS
GGCGCATCTATTCGTCCTGG+TGG	0.652243	6_4:+3886448	Msa0971800:five_prime_UTR
AAGTGGTCTTCCAAGGCCTG+AGG	0.653205	6_4:+3886677	Msa0971800:CDS
CCGGTTACCGCATAAACTGT+GGG	0.661149	6_4:+3887884	Msa0971800:CDS
TGGAATGGACTATAACCACC+AGG	0.679605	6_4:-3886463	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATATATAATAATGTAAACA+TGG	-	chr6_4:3886854-3886873	None:intergenic	10.0%
!!	TATATATAATAATGTAAACA+TGG	-	chr6_4:3886854-3886873	None:intergenic	10.0%
!!!	CATTAAATTTTTATAGTACA+TGG	-	chr6_4:3886939-3886958	None:intergenic	15.0%
!!	ACTATATACATATGATAAAT+AGG	-	chr6_4:3887044-3887063	None:intergenic	15.0%
!!	TTATCATATGTATATAGTTT+AGG	+	chr6_4:3887046-3887065	Msa0971800:intron	15.0%
!!	TATCATATGTATATAGTTTA+GGG	+	chr6_4:3887047-3887066	Msa0971800:intron	15.0%
!!!	CATTAAATTTTTATAGTACA+TGG	-	chr6_4:3886939-3886958	None:intergenic	15.0%
!!	ACTATATACATATGATAAAT+AGG	-	chr6_4:3887044-3887063	None:intergenic	15.0%
!!	TTATCATATGTATATAGTTT+AGG	+	chr6_4:3887046-3887065	Msa0971800:intron	15.0%
!!	TATCATATGTATATAGTTTA+GGG	+	chr6_4:3887047-3887066	Msa0971800:intron	15.0%
!!	TAATAATGTAAACATGGATT+TGG	-	chr6_4:3886848-3886867	None:intergenic	20.0%
!!	TTATGAGTAAATCTTAAACT+TGG	+	chr6_4:3886881-3886900	Msa0971800:intron	20.0%
!!	GATAGATTAAGAATAATTGA+GGG	-	chr6_4:3886968-3886987	None:intergenic	20.0%
!!	TGATAGATTAAGAATAATTG+AGG	-	chr6_4:3886969-3886988	None:intergenic	20.0%
!!!	TTGTCACATTTATCATATTT+TGG	+	chr6_4:3887016-3887035	Msa0971800:intron	20.0%
!!	CATATCAACATATGTAAATT+TGG	-	chr6_4:3887371-3887390	None:intergenic	20.0%
!!!	ATTTCTGATTAGTTCATATT+TGG	-	chr6_4:3887401-3887420	None:intergenic	20.0%
!!!	TAATTTTTTCAGCAATCAAT+TGG	-	chr6_4:3888008-3888027	None:intergenic	20.0%
!!	ATTGCTGAAAAAATTATCAA+CGG	+	chr6_4:3888012-3888031	Msa0971800:CDS	20.0%
!!	TAATAATGTAAACATGGATT+TGG	-	chr6_4:3886848-3886867	None:intergenic	20.0%
!!	TTATGAGTAAATCTTAAACT+TGG	+	chr6_4:3886881-3886900	Msa0971800:intron	20.0%
!!	GATAGATTAAGAATAATTGA+GGG	-	chr6_4:3886968-3886987	None:intergenic	20.0%
!!	TGATAGATTAAGAATAATTG+AGG	-	chr6_4:3886969-3886988	None:intergenic	20.0%
!!!	TTGTCACATTTATCATATTT+TGG	+	chr6_4:3887016-3887035	Msa0971800:intron	20.0%
!!	CATATCAACATATGTAAATT+TGG	-	chr6_4:3887371-3887390	None:intergenic	20.0%
!!!	ATTTCTGATTAGTTCATATT+TGG	-	chr6_4:3887401-3887420	None:intergenic	20.0%
!!!	TAATTTTTTCAGCAATCAAT+TGG	-	chr6_4:3888008-3888027	None:intergenic	20.0%
!!	ATTGCTGAAAAAATTATCAA+CGG	+	chr6_4:3888012-3888031	Msa0971800:CDS	20.0%
!!!	TTCAATTTTGTGTTTTTGTG+TGG	+	chr6_4:3886329-3886348	Msa0971800:five_prime_UTR	25.0%
!	TTCAAATATGCACTTAGATA+TGG	-	chr6_4:3886382-3886401	None:intergenic	25.0%
!	TAGAACTAAAATACTTGTCA+TGG	+	chr6_4:3887129-3887148	Msa0971800:intron	25.0%
!!	TTTTAGCAACTATACAATGA+AGG	+	chr6_4:3887157-3887176	Msa0971800:intron	25.0%
!	TCATAAGAGAAGTAATTGAA+GGG	-	chr6_4:3887229-3887248	None:intergenic	25.0%
!	TACAAGCTTGAAATTTGAAT+CGG	+	chr6_4:3887579-3887598	Msa0971800:intron	25.0%
!	ATCCTTCTCAACATATTATT+TGG	+	chr6_4:3887953-3887972	Msa0971800:CDS	25.0%
!	TCCTTCTCAACATATTATTT+GGG	+	chr6_4:3887954-3887973	Msa0971800:CDS	25.0%
!!!	TTCAATTTTGTGTTTTTGTG+TGG	+	chr6_4:3886329-3886348	Msa0971800:five_prime_UTR	25.0%
!	TTCAAATATGCACTTAGATA+TGG	-	chr6_4:3886382-3886401	None:intergenic	25.0%
!	TAGAACTAAAATACTTGTCA+TGG	+	chr6_4:3887129-3887148	Msa0971800:intron	25.0%
!!	TTTTAGCAACTATACAATGA+AGG	+	chr6_4:3887157-3887176	Msa0971800:intron	25.0%
!	TCATAAGAGAAGTAATTGAA+GGG	-	chr6_4:3887229-3887248	None:intergenic	25.0%
!	TACAAGCTTGAAATTTGAAT+CGG	+	chr6_4:3887579-3887598	Msa0971800:intron	25.0%
!	ATCCTTCTCAACATATTATT+TGG	+	chr6_4:3887953-3887972	Msa0971800:CDS	25.0%
!	TCCTTCTCAACATATTATTT+GGG	+	chr6_4:3887954-3887973	Msa0971800:CDS	25.0%
!	GAGTTGATTAAACAGAATCT+TGG	-	chr6_4:3886533-3886552	None:intergenic	30.0%
	AGTAATGAAATGCAAAGATG+AGG	-	chr6_4:3886576-3886595	None:intergenic	30.0%
	TAATGTAAACATGGATTTGG+TGG	-	chr6_4:3886845-3886864	None:intergenic	30.0%
	GTATTACACTATCTGCTATT+TGG	+	chr6_4:3886912-3886931	Msa0971800:intron	30.0%
	AAACAAGAGTGATAGTTCAA+AGG	-	chr6_4:3886998-3887017	None:intergenic	30.0%
	ATATAGTTTAGGGACCAAAT+AGG	+	chr6_4:3887057-3887076	Msa0971800:intron	30.0%
	CTCATAAGAGAAGTAATTGA+AGG	-	chr6_4:3887230-3887249	None:intergenic	30.0%
	TTCTCTTATGAGAAGAAGAA+GGG	+	chr6_4:3887238-3887257	Msa0971800:intron	30.0%
	GGAATTTAACAAGAAGCTAA+AGG	+	chr6_4:3887309-3887328	Msa0971800:CDS	30.0%
	ATGAACTAATCAGAAATGCA+AGG	+	chr6_4:3887404-3887423	Msa0971800:intron	30.0%
!	TTGATGATTGGATCAAAGAT+TGG	+	chr6_4:3887511-3887530	Msa0971800:intron	30.0%
!!	GTCAATATTTTTAACGATCG+CGG	+	chr6_4:3887738-3887757	Msa0971800:intron	30.0%
!	AACAATTTATGATTGGTTGG+CGG	+	chr6_4:3887761-3887780	Msa0971800:intron	30.0%
!!	TCTTAACTTTGATTTGTGAC+AGG	+	chr6_4:3887823-3887842	Msa0971800:intron	30.0%
	GGGTCGAAAGAAATAATAAA+TGG	+	chr6_4:3887904-3887923	Msa0971800:CDS	30.0%
	TCCCAAATAATATGTTGAGA+AGG	-	chr6_4:3887958-3887977	None:intergenic	30.0%
	TCTCAACATATTATTTGGGA+TGG	+	chr6_4:3887958-3887977	Msa0971800:CDS	30.0%
	TATAAACATGCCTTTCCAAT+TGG	-	chr6_4:3888060-3888079	None:intergenic	30.0%
!	GAGTTGATTAAACAGAATCT+TGG	-	chr6_4:3886533-3886552	None:intergenic	30.0%
	AGTAATGAAATGCAAAGATG+AGG	-	chr6_4:3886576-3886595	None:intergenic	30.0%
	TAATGTAAACATGGATTTGG+TGG	-	chr6_4:3886845-3886864	None:intergenic	30.0%
	GTATTACACTATCTGCTATT+TGG	+	chr6_4:3886912-3886931	Msa0971800:intron	30.0%
	AAACAAGAGTGATAGTTCAA+AGG	-	chr6_4:3886998-3887017	None:intergenic	30.0%
	ATATAGTTTAGGGACCAAAT+AGG	+	chr6_4:3887057-3887076	Msa0971800:intron	30.0%
	CTCATAAGAGAAGTAATTGA+AGG	-	chr6_4:3887230-3887249	None:intergenic	30.0%
	TTCTCTTATGAGAAGAAGAA+GGG	+	chr6_4:3887238-3887257	Msa0971800:intron	30.0%
	GGAATTTAACAAGAAGCTAA+AGG	+	chr6_4:3887309-3887328	Msa0971800:CDS	30.0%
	ATGAACTAATCAGAAATGCA+AGG	+	chr6_4:3887404-3887423	Msa0971800:intron	30.0%
!	TTGATGATTGGATCAAAGAT+TGG	+	chr6_4:3887511-3887530	Msa0971800:intron	30.0%
!!	GTCAATATTTTTAACGATCG+CGG	+	chr6_4:3887738-3887757	Msa0971800:intron	30.0%
!	AACAATTTATGATTGGTTGG+CGG	+	chr6_4:3887761-3887780	Msa0971800:intron	30.0%
!!	TCTTAACTTTGATTTGTGAC+AGG	+	chr6_4:3887823-3887842	Msa0971800:intron	30.0%
	GGGTCGAAAGAAATAATAAA+TGG	+	chr6_4:3887904-3887923	Msa0971800:CDS	30.0%
	TCCCAAATAATATGTTGAGA+AGG	-	chr6_4:3887958-3887977	None:intergenic	30.0%
	TCTCAACATATTATTTGGGA+TGG	+	chr6_4:3887958-3887977	Msa0971800:CDS	30.0%
	TATAAACATGCCTTTCCAAT+TGG	-	chr6_4:3888060-3888079	None:intergenic	30.0%
	AGTGCATATTTGAACTCAGT+TGG	+	chr6_4:3886388-3886407	Msa0971800:five_prime_UTR	35.0%
	ACTCAGTTGGATCAAATTAC+AGG	+	chr6_4:3886401-3886420	Msa0971800:five_prime_UTR	35.0%
	GTTTCTGTTATGCCTTTCAT+TGG	+	chr6_4:3886597-3886616	Msa0971800:five_prime_UTR	35.0%
	CAATTTCACCATCCAATGAA+AGG	-	chr6_4:3886612-3886631	None:intergenic	35.0%
	CTTTCATTGGATGGTGAAAT+TGG	+	chr6_4:3886610-3886629	Msa0971800:five_prime_UTR	35.0%
	TTCCTGATGAATGATAATCC+AGG	+	chr6_4:3886636-3886655	Msa0971800:exon	35.0%
	TCCTGATGAATGATAATCCA+GGG	+	chr6_4:3886637-3886656	Msa0971800:exon	35.0%
	GCACTTTACACGATTGATAT+TGG	+	chr6_4:3886711-3886730	Msa0971800:CDS	35.0%
	TGAAGTGTGTAGAAAACCAT+AGG	-	chr6_4:3886751-3886770	None:intergenic	35.0%
	CTTCAGAAGAACAAGTTCAA+AGG	+	chr6_4:3886766-3886785	Msa0971800:CDS	35.0%
!	GAGAATTGGCTCAATATTTC+AGG	-	chr6_4:3886798-3886817	None:intergenic	35.0%
	GCAGATAGTGTAATACTTCA+AGG	-	chr6_4:3886908-3886927	None:intergenic	35.0%
	CTTCTCTTATGAGAAGAAGA+AGG	+	chr6_4:3887237-3887256	Msa0971800:intron	35.0%
	ACTAAGGAGAAAACTCTCAT+TGG	+	chr6_4:3887345-3887364	Msa0971800:CDS	35.0%
	TAAAGACATGAAGATCACCT+TGG	-	chr6_4:3887432-3887451	None:intergenic	35.0%
	AAGGTGATCTTCATGTCTTT+AGG	+	chr6_4:3887431-3887450	Msa0971800:intron	35.0%
	TTACAAAATTGTGACTGCAC+AGG	-	chr6_4:3887466-3887485	None:intergenic	35.0%
	TTGAATCGGCTATTCTTGAT+TGG	+	chr6_4:3887593-3887612	Msa0971800:intron	35.0%
	CAATCACGAAACATCTGATA+CGG	+	chr6_4:3887692-3887711	Msa0971800:intron	35.0%
	ATCGCGGAACAATTTATGAT+TGG	+	chr6_4:3887754-3887773	Msa0971800:intron	35.0%
	CGGAACAATTTATGATTGGT+TGG	+	chr6_4:3887758-3887777	Msa0971800:intron	35.0%
!!	GACAGGTTTTATGAGTCTAT+TGG	+	chr6_4:3887840-3887859	Msa0971800:intron	35.0%
	TGTTGAGAAGGATTTGTACA+TGG	-	chr6_4:3887946-3887965	None:intergenic	35.0%
!!	AATCAATTGGTTTGCCCTTT+GGG	-	chr6_4:3887995-3888014	None:intergenic	35.0%
	AGTGCATATTTGAACTCAGT+TGG	+	chr6_4:3886388-3886407	Msa0971800:five_prime_UTR	35.0%
	ACTCAGTTGGATCAAATTAC+AGG	+	chr6_4:3886401-3886420	Msa0971800:five_prime_UTR	35.0%
	GTTTCTGTTATGCCTTTCAT+TGG	+	chr6_4:3886597-3886616	Msa0971800:five_prime_UTR	35.0%
	CAATTTCACCATCCAATGAA+AGG	-	chr6_4:3886612-3886631	None:intergenic	35.0%
	CTTTCATTGGATGGTGAAAT+TGG	+	chr6_4:3886610-3886629	Msa0971800:five_prime_UTR	35.0%
	TTCCTGATGAATGATAATCC+AGG	+	chr6_4:3886636-3886655	Msa0971800:exon	35.0%
	TCCTGATGAATGATAATCCA+GGG	+	chr6_4:3886637-3886656	Msa0971800:exon	35.0%
	GCACTTTACACGATTGATAT+TGG	+	chr6_4:3886711-3886730	Msa0971800:CDS	35.0%
	TGAAGTGTGTAGAAAACCAT+AGG	-	chr6_4:3886751-3886770	None:intergenic	35.0%
	CTTCAGAAGAACAAGTTCAA+AGG	+	chr6_4:3886766-3886785	Msa0971800:CDS	35.0%
!	GAGAATTGGCTCAATATTTC+AGG	-	chr6_4:3886798-3886817	None:intergenic	35.0%
	GCAGATAGTGTAATACTTCA+AGG	-	chr6_4:3886908-3886927	None:intergenic	35.0%
	CTTCTCTTATGAGAAGAAGA+AGG	+	chr6_4:3887237-3887256	Msa0971800:intron	35.0%
	ACTAAGGAGAAAACTCTCAT+TGG	+	chr6_4:3887345-3887364	Msa0971800:CDS	35.0%
	TAAAGACATGAAGATCACCT+TGG	-	chr6_4:3887432-3887451	None:intergenic	35.0%
	AAGGTGATCTTCATGTCTTT+AGG	+	chr6_4:3887431-3887450	Msa0971800:intron	35.0%
	TTACAAAATTGTGACTGCAC+AGG	-	chr6_4:3887466-3887485	None:intergenic	35.0%
	TTGAATCGGCTATTCTTGAT+TGG	+	chr6_4:3887593-3887612	Msa0971800:intron	35.0%
	CAATCACGAAACATCTGATA+CGG	+	chr6_4:3887692-3887711	Msa0971800:intron	35.0%
	ATCGCGGAACAATTTATGAT+TGG	+	chr6_4:3887754-3887773	Msa0971800:intron	35.0%
	CGGAACAATTTATGATTGGT+TGG	+	chr6_4:3887758-3887777	Msa0971800:intron	35.0%
!!	GACAGGTTTTATGAGTCTAT+TGG	+	chr6_4:3887840-3887859	Msa0971800:intron	35.0%
	TGTTGAGAAGGATTTGTACA+TGG	-	chr6_4:3887946-3887965	None:intergenic	35.0%
!!	AATCAATTGGTTTGCCCTTT+GGG	-	chr6_4:3887995-3888014	None:intergenic	35.0%
!	GTTTTTGTGTGGACATATGC+AGG	+	chr6_4:3886340-3886359	Msa0971800:five_prime_UTR	40.0%
	GTTGGATCAAATTACAGGCA+TGG	+	chr6_4:3886406-3886425	Msa0971800:five_prime_UTR	40.0%
	GGTTATAGTCCATTCCATCT+TGG	+	chr6_4:3886469-3886488	Msa0971800:five_prime_UTR	40.0%
	ACTTGAAGTCCAAGATGGAA+TGG	-	chr6_4:3886481-3886500	None:intergenic	40.0%
	GAGATACTTGAAGTCCAAGA+TGG	-	chr6_4:3886486-3886505	None:intergenic	40.0%
	CTGTTATGCCTTTCATTGGA+TGG	+	chr6_4:3886601-3886620	Msa0971800:five_prime_UTR	40.0%
	TCCCTGGATTATCATTCATC+AGG	-	chr6_4:3886641-3886660	None:intergenic	40.0%
	GGACAAAATGATCTTGCCTA+TGG	+	chr6_4:3886732-3886751	Msa0971800:CDS	40.0%
	ACCAATTACCTTCACTGCTT+GGG	-	chr6_4:3886820-3886839	None:intergenic	40.0%
	TACCAATTACCTTCACTGCT+TGG	-	chr6_4:3886821-3886840	None:intergenic	40.0%
	ATACACAACACAGGTCCAAT+TGG	+	chr6_4:3887196-3887215	Msa0971800:intron	40.0%
	TTGAAGGGTAAGCATCCAAT+TGG	-	chr6_4:3887214-3887233	None:intergenic	40.0%
	ACCTCAGAACAAAATAGCTC+AGG	+	chr6_4:3887288-3887307	Msa0971800:CDS	40.0%
!!	TCCTGAGCTATTTTGTTCTG+AGG	-	chr6_4:3887292-3887311	None:intergenic	40.0%
	TTCTCCTTAGTTGAGACACT+TGG	-	chr6_4:3887336-3887355	None:intergenic	40.0%
	CTTTGATCCAATCATCAACG+TGG	-	chr6_4:3887509-3887528	None:intergenic	40.0%
!	TGATTGGTCAACCACAAATG+TGG	+	chr6_4:3887609-3887628	Msa0971800:intron	40.0%
	AGTCTATTGGACTTCTGTTG+CGG	+	chr6_4:3887853-3887872	Msa0971800:intron	40.0%
!!	CAATCAATTGGTTTGCCCTT+TGG	-	chr6_4:3887996-3888015	None:intergenic	40.0%
	TCTGATCCACTAGTTCCAAT+TGG	+	chr6_4:3888042-3888061	Msa0971800:CDS	40.0%
	TCCACTAGTTCCAATTGGAA+AGG	+	chr6_4:3888047-3888066	Msa0971800:CDS	40.0%
!	GTTTTTGTGTGGACATATGC+AGG	+	chr6_4:3886340-3886359	Msa0971800:five_prime_UTR	40.0%
	GTTGGATCAAATTACAGGCA+TGG	+	chr6_4:3886406-3886425	Msa0971800:five_prime_UTR	40.0%
	GGTTATAGTCCATTCCATCT+TGG	+	chr6_4:3886469-3886488	Msa0971800:five_prime_UTR	40.0%
	ACTTGAAGTCCAAGATGGAA+TGG	-	chr6_4:3886481-3886500	None:intergenic	40.0%
	GAGATACTTGAAGTCCAAGA+TGG	-	chr6_4:3886486-3886505	None:intergenic	40.0%
	CTGTTATGCCTTTCATTGGA+TGG	+	chr6_4:3886601-3886620	Msa0971800:five_prime_UTR	40.0%
	TCCCTGGATTATCATTCATC+AGG	-	chr6_4:3886641-3886660	None:intergenic	40.0%
	GGACAAAATGATCTTGCCTA+TGG	+	chr6_4:3886732-3886751	Msa0971800:CDS	40.0%
	ACCAATTACCTTCACTGCTT+GGG	-	chr6_4:3886820-3886839	None:intergenic	40.0%
	TACCAATTACCTTCACTGCT+TGG	-	chr6_4:3886821-3886840	None:intergenic	40.0%
	ATACACAACACAGGTCCAAT+TGG	+	chr6_4:3887196-3887215	Msa0971800:intron	40.0%
	TTGAAGGGTAAGCATCCAAT+TGG	-	chr6_4:3887214-3887233	None:intergenic	40.0%
	ACCTCAGAACAAAATAGCTC+AGG	+	chr6_4:3887288-3887307	Msa0971800:CDS	40.0%
!!	TCCTGAGCTATTTTGTTCTG+AGG	-	chr6_4:3887292-3887311	None:intergenic	40.0%
	TTCTCCTTAGTTGAGACACT+TGG	-	chr6_4:3887336-3887355	None:intergenic	40.0%
	CTTTGATCCAATCATCAACG+TGG	-	chr6_4:3887509-3887528	None:intergenic	40.0%
!	TGATTGGTCAACCACAAATG+TGG	+	chr6_4:3887609-3887628	Msa0971800:intron	40.0%
	AGTCTATTGGACTTCTGTTG+CGG	+	chr6_4:3887853-3887872	Msa0971800:intron	40.0%
!!	CAATCAATTGGTTTGCCCTT+TGG	-	chr6_4:3887996-3888015	None:intergenic	40.0%
	TCTGATCCACTAGTTCCAAT+TGG	+	chr6_4:3888042-3888061	Msa0971800:CDS	40.0%
	TCCACTAGTTCCAATTGGAA+AGG	+	chr6_4:3888047-3888066	Msa0971800:CDS	40.0%
!!	TGGAATGGACTATAACCACC+AGG	-	chr6_4:3886466-3886485	None:intergenic	45.0%
	ACAGAACCACCTTTCAGAAG+TGG	+	chr6_4:3886660-3886679	Msa0971800:CDS	45.0%
	CTTGGAAGACCACTTCTGAA+AGG	-	chr6_4:3886672-3886691	None:intergenic	45.0%
	CTTTCAGAAGTGGTCTTCCA+AGG	+	chr6_4:3886670-3886689	Msa0971800:CDS	45.0%
	TCCCAAGCAGTGAAGGTAAT+TGG	+	chr6_4:3886816-3886835	Msa0971800:intron	45.0%
	GTATCACTCGCTCTCCTATT+TGG	-	chr6_4:3887074-3887093	None:intergenic	45.0%
	AGGAGAGCGAGTGATACTTT+AGG	+	chr6_4:3887077-3887096	Msa0971800:intron	45.0%
	GGAGAGCGAGTGATACTTTA+GGG	+	chr6_4:3887078-3887097	Msa0971800:intron	45.0%
!	GTGTTCTGGATACACAACAC+AGG	+	chr6_4:3887187-3887206	Msa0971800:intron	45.0%
	AAGGGTAACCTAGATGCCAA+TGG	+	chr6_4:3887256-3887275	Msa0971800:CDS	45.0%
	AGGACCAAGTGTCTCAACTA+AGG	+	chr6_4:3887329-3887348	Msa0971800:CDS	45.0%
	ATCAGAAATGCAAGGAGCCA+AGG	+	chr6_4:3887412-3887431	Msa0971800:intron	45.0%
	TGATCCAATCATCAACGTGG+TGG	-	chr6_4:3887506-3887525	None:intergenic	45.0%
	AGTGAAGTCAGCCACATTTG+TGG	-	chr6_4:3887623-3887642	None:intergenic	45.0%
	CTTTCGACCCACAGTTTATG+CGG	-	chr6_4:3887894-3887913	None:intergenic	45.0%
	ATGGCATACACTACTCCCAA+AGG	+	chr6_4:3887977-3887996	Msa0971800:CDS	45.0%
	TGGCATACACTACTCCCAAA+GGG	+	chr6_4:3887978-3887997	Msa0971800:CDS	45.0%
!	TGGAACTAGTGGATCAGAGA+AGG	-	chr6_4:3888040-3888059	None:intergenic	45.0%
	GCCTTTCCAATTGGAACTAG+TGG	-	chr6_4:3888051-3888070	None:intergenic	45.0%
!!	TGGAATGGACTATAACCACC+AGG	-	chr6_4:3886466-3886485	None:intergenic	45.0%
	ACAGAACCACCTTTCAGAAG+TGG	+	chr6_4:3886660-3886679	Msa0971800:CDS	45.0%
	CTTGGAAGACCACTTCTGAA+AGG	-	chr6_4:3886672-3886691	None:intergenic	45.0%
	CTTTCAGAAGTGGTCTTCCA+AGG	+	chr6_4:3886670-3886689	Msa0971800:CDS	45.0%
	TCCCAAGCAGTGAAGGTAAT+TGG	+	chr6_4:3886816-3886835	Msa0971800:intron	45.0%
	GTATCACTCGCTCTCCTATT+TGG	-	chr6_4:3887074-3887093	None:intergenic	45.0%
	AGGAGAGCGAGTGATACTTT+AGG	+	chr6_4:3887077-3887096	Msa0971800:intron	45.0%
	GGAGAGCGAGTGATACTTTA+GGG	+	chr6_4:3887078-3887097	Msa0971800:intron	45.0%
!	GTGTTCTGGATACACAACAC+AGG	+	chr6_4:3887187-3887206	Msa0971800:intron	45.0%
	AAGGGTAACCTAGATGCCAA+TGG	+	chr6_4:3887256-3887275	Msa0971800:CDS	45.0%
	AGGACCAAGTGTCTCAACTA+AGG	+	chr6_4:3887329-3887348	Msa0971800:CDS	45.0%
	ATCAGAAATGCAAGGAGCCA+AGG	+	chr6_4:3887412-3887431	Msa0971800:intron	45.0%
	TGATCCAATCATCAACGTGG+TGG	-	chr6_4:3887506-3887525	None:intergenic	45.0%
	AGTGAAGTCAGCCACATTTG+TGG	-	chr6_4:3887623-3887642	None:intergenic	45.0%
	CTTTCGACCCACAGTTTATG+CGG	-	chr6_4:3887894-3887913	None:intergenic	45.0%
	ATGGCATACACTACTCCCAA+AGG	+	chr6_4:3887977-3887996	Msa0971800:CDS	45.0%
	TGGCATACACTACTCCCAAA+GGG	+	chr6_4:3887978-3887997	Msa0971800:CDS	45.0%
!	TGGAACTAGTGGATCAGAGA+AGG	-	chr6_4:3888040-3888059	None:intergenic	45.0%
	GCCTTTCCAATTGGAACTAG+TGG	-	chr6_4:3888051-3888070	None:intergenic	45.0%
!	CATGGTGCCAACTTTGCAGT+AGG	+	chr6_4:3886424-3886443	Msa0971800:five_prime_UTR	50.0%
!	GGAAGACCACTTCTGAAAGG+TGG	-	chr6_4:3886669-3886688	None:intergenic	50.0%
	TTAGAGAAGTCCTCAGGCCT+TGG	-	chr6_4:3886690-3886709	None:intergenic	50.0%
	AAGGCCTGAGGACTTCTCTA+AGG	+	chr6_4:3886689-3886708	Msa0971800:CDS	50.0%
	AGTGCCTTAGAGAAGTCCTC+AGG	-	chr6_4:3886696-3886715	None:intergenic	50.0%
	CCTTCACTGCTTGGGAGAAT+TGG	-	chr6_4:3886812-3886831	None:intergenic	50.0%
	CCAATTCTCCCAAGCAGTGA+AGG	+	chr6_4:3886809-3886828	Msa0971800:CDS	50.0%
!!	ATGAAGGTGCGAGAGTGTTC+TGG	+	chr6_4:3887173-3887192	Msa0971800:intron	50.0%
	TCACACAGCCATTGGCATCT+AGG	-	chr6_4:3887267-3887286	None:intergenic	50.0%
	CTGAGGTTTCACACAGCCAT+TGG	-	chr6_4:3887275-3887294	None:intergenic	50.0%
	TTCTGTTGCGGCAGTTACAC+CGG	+	chr6_4:3887865-3887884	Msa0971800:intron	50.0%
	ACCGGTTACCGCATAAACTG+TGG	+	chr6_4:3887883-3887902	Msa0971800:CDS	50.0%
	CCCACAGTTTATGCGGTAAC+CGG	-	chr6_4:3887887-3887906	None:intergenic	50.0%
	CCGGTTACCGCATAAACTGT+GGG	+	chr6_4:3887884-3887903	Msa0971800:CDS	50.0%
!	CATGGTGCCAACTTTGCAGT+AGG	+	chr6_4:3886424-3886443	Msa0971800:five_prime_UTR	50.0%
!	GGAAGACCACTTCTGAAAGG+TGG	-	chr6_4:3886669-3886688	None:intergenic	50.0%
	TTAGAGAAGTCCTCAGGCCT+TGG	-	chr6_4:3886690-3886709	None:intergenic	50.0%
	AAGGCCTGAGGACTTCTCTA+AGG	+	chr6_4:3886689-3886708	Msa0971800:CDS	50.0%
	AGTGCCTTAGAGAAGTCCTC+AGG	-	chr6_4:3886696-3886715	None:intergenic	50.0%
	CCTTCACTGCTTGGGAGAAT+TGG	-	chr6_4:3886812-3886831	None:intergenic	50.0%
	CCAATTCTCCCAAGCAGTGA+AGG	+	chr6_4:3886809-3886828	Msa0971800:CDS	50.0%
!!	ATGAAGGTGCGAGAGTGTTC+TGG	+	chr6_4:3887173-3887192	Msa0971800:intron	50.0%
	TCACACAGCCATTGGCATCT+AGG	-	chr6_4:3887267-3887286	None:intergenic	50.0%
	CTGAGGTTTCACACAGCCAT+TGG	-	chr6_4:3887275-3887294	None:intergenic	50.0%
	TTCTGTTGCGGCAGTTACAC+CGG	+	chr6_4:3887865-3887884	Msa0971800:intron	50.0%
	ACCGGTTACCGCATAAACTG+TGG	+	chr6_4:3887883-3887902	Msa0971800:CDS	50.0%
	CCCACAGTTTATGCGGTAAC+CGG	-	chr6_4:3887887-3887906	None:intergenic	50.0%
	CCGGTTACCGCATAAACTGT+GGG	+	chr6_4:3887884-3887903	Msa0971800:CDS	50.0%
	GGTGCCAACTTTGCAGTAGG+CGG	+	chr6_4:3886427-3886446	Msa0971800:five_prime_UTR	55.0%
!	CTGAAAGGTGGTTCTGTCCC+TGG	-	chr6_4:3886657-3886676	None:intergenic	55.0%
	AAGTGGTCTTCCAAGGCCTG+AGG	+	chr6_4:3886677-3886696	Msa0971800:CDS	55.0%
!!	GCAGCCACCACGTTGATGAT+TGG	+	chr6_4:3887499-3887518	Msa0971800:intron	55.0%
	GGTGCCAACTTTGCAGTAGG+CGG	+	chr6_4:3886427-3886446	Msa0971800:five_prime_UTR	55.0%
!	CTGAAAGGTGGTTCTGTCCC+TGG	-	chr6_4:3886657-3886676	None:intergenic	55.0%
	AAGTGGTCTTCCAAGGCCTG+AGG	+	chr6_4:3886677-3886696	Msa0971800:CDS	55.0%
!!	GCAGCCACCACGTTGATGAT+TGG	+	chr6_4:3887499-3887518	Msa0971800:intron	55.0%
	TGCGCCGCCTACTGCAAAGT+TGG	-	chr6_4:3886434-3886453	None:intergenic	60.0%
	GGCGCATCTATTCGTCCTGG+TGG	+	chr6_4:3886448-3886467	Msa0971800:five_prime_UTR	60.0%
	TGCGCCGCCTACTGCAAAGT+TGG	-	chr6_4:3886434-3886453	None:intergenic	60.0%
	GGCGCATCTATTCGTCCTGG+TGG	+	chr6_4:3886448-3886467	Msa0971800:five_prime_UTR	60.0%
	GGCGGCGCATCTATTCGTCC+TGG	+	chr6_4:3886445-3886464	Msa0971800:five_prime_UTR	65.0%
	GGCGGCGCATCTATTCGTCC+TGG	+	chr6_4:3886445-3886464	Msa0971800:five_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	3886241	3888080	3886241	ID=Msa0971800;Name=Msa0971800
chr6_4	mRNA	3886241	3888080	3886241	ID=Msa0971800-mRNA-1;Parent=Msa0971800;Name=Msa0971800-mRNA-1;_AED=0.43;_eAED=0.43;_QI=401\|0\|0.33\|1\|1\|1\|3\|0\|174
chr6_4	exon	3886241	3886830	3886241	ID=Msa0971800-mRNA-1:exon:1727;Parent=Msa0971800-mRNA-1
chr6_4	exon	3887256	3887389	3887256	ID=Msa0971800-mRNA-1:exon:1728;Parent=Msa0971800-mRNA-1
chr6_4	exon	3887879	3888080	3887879	ID=Msa0971800-mRNA-1:exon:1729;Parent=Msa0971800-mRNA-1
chr6_4	five_prime_UTR	3886241	3886641	3886241	ID=Msa0971800-mRNA-1:five_prime_utr;Parent=Msa0971800-mRNA-1
chr6_4	CDS	3886642	3886830	3886642	ID=Msa0971800-mRNA-1:cds;Parent=Msa0971800-mRNA-1
chr6_4	CDS	3887256	3887389	3887256	ID=Msa0971800-mRNA-1:cds;Parent=Msa0971800-mRNA-1
chr6_4	CDS	3887879	3888080	3887879	ID=Msa0971800-mRNA-1:cds;Parent=Msa0971800-mRNA-1

Gene Sequence

>Msa0971800

ATGAATGATAATCCAGGGACAGAACCACCTTTCAGAAGTGGTCTTCCAAGGCCTGAGGACTTCTCTAAGGCACTTTACACGATTGATATTGGACAAAATGATCTTGCCTATGGTTTTCTACACACTTCAGAAGAACAAGTTCAAAGGTCAATTCCTGAAATATTGAGCCAATTCTCCCAAGCAGTGAAGAAGGGTAACCTAGATGCCAATGGCTGTGTGAAACCTCAGAACAAAATAGCTCAGGAATTTAACAAGAAGCTAAAGGACCAAGTGTCTCAACTAAGGAGAAAACTCTCATTGGCCAAATTTACATATGTTGATATTTACACCGGTTACCGCATAAACTGTGGGTCGAAAGAAATAATAAATGGAACTGTTAACAGAAATCCATGTACAAATCCTTCTCAACATATTATTTGGGATGGCATACACTACTCCCAAAGGGCAAACCAATTGATTGCTGAAAAAATTATCAACGGATCCTTCTCTGATCCACTAGTTCCAATTGGAAAGGCATGTTTATAA

Protein sequence

>Msa0971800

MNDNPGTEPPFRSGLPRPEDFSKALYTIDIGQNDLAYGFLHTSEEQVQRSIPEILSQFSQAVKKGNLDANGCVKPQNKIAQEFNKKLKDQVSQLRRKLSLAKFTYVDIYTGYRINCGSKEIINGTVNRNPCTNPSQHIIWDGIHYSQRANQLIAEKIINGSFSDPLVPIGKACL*