AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115880 MtrunA17_Chr1g0211961 97.427 1205 13 4 68 1271 1 1188 0.0 2395
Msa0115880 MtrunA17_Chr1g0156271 96.738 981 31 1 291 1271 244 1223 0.0 1911
Msa0115880 MtrunA17_Chr3g0086391 57.211 631 268 2 610 1238 404 1034 0.0 788
Msa0115880 MtrunA17_Chr3g0100131 46.769 851 396 12 431 1250 408 1232 0.0 781
Msa0115880 MtrunA17_Chr2g0329131 47.101 845 403 11 431 1250 386 1211 0.0 779
Msa0115880 MtrunA17_Chr1g0194381 52.287 656 295 5 613 1251 52 706 0.0 721
Msa0115880 MtrunA17_Chr3g0099251 49.776 671 292 7 607 1233 44 713 0.0 684
Msa0115880 MtrunA17_Chr4g0044491 49.765 637 281 4 613 1238 53 661 0.0 657
Msa0115880 MtrunA17_Chr2g0283271 48.092 655 317 5 611 1242 46 700 0.0 639
Msa0115880 MtrunA17_Chr7g0259941 45.760 684 312 6 613 1238 43 725 0.0 621
Msa0115880 MtrunA17_Chr8g0359501 45.614 684 313 7 613 1238 43 725 0.0 617
Msa0115880 MtrunA17_Chr8g0377111 46.082 638 313 11 617 1229 3 634 0.0 576
Msa0115880 MtrunA17_Chr5g0432591 61.000 400 153 2 610 1006 201 600 1.61e-173 527
Msa0115880 MtrunA17_Chr6g0476001 61.782 348 131 2 604 949 239 586 2.89e-151 468
Msa0115880 MtrunA17_Chr3g0123681 37.337 691 380 17 597 1250 242 916 5.74e-124 422
Msa0115880 MtrunA17_Chr3g0082091 38.022 647 357 14 635 1250 4 637 3.60e-121 410
Msa0115880 MtrunA17_Chr1g0164621 38.059 649 356 15 635 1250 4 639 1.19e-120 409
Msa0115880 MtrunA17_Chr3g0100151 53.782 238 107 1 884 1121 36 270 1.53e-84 276
Msa0115880 MtrunA17_Chr3g0100171 52.113 213 102 0 918 1130 49 261 1.71e-75 258
Msa0115880 MtrunA17_Chr8g0354481 59.091 198 81 0 718 915 1 198 9.90e-74 243
Msa0115880 MtrunA17_Chr8g0359451 48.548 241 81 3 623 820 19 259 1.73e-65 223
Msa0115880 MtrunA17_Chr5g0432601 48.148 216 110 2 1033 1246 1 216 1.66e-64 218
Msa0115880 MtrunA17_Chr6g0475991 42.400 250 112 3 999 1246 1 220 4.26e-59 203
Msa0115880 MtrunA17_Chr1g0156211 79.720 143 25 2 64 206 4 142 3.66e-58 202
Msa0115880 MtrunA17_Chr1g0177141 37.011 435 246 13 810 1221 524 953 1.21e-55 211
Msa0115880 MtrunA17_Chr1g0177141 48.663 187 92 2 615 797 265 451 6.22e-43 171
Msa0115880 MtrunA17_Chr4g0010901 41.606 274 127 5 611 851 265 538 2.69e-55 211
Msa0115880 MtrunA17_Chr4g0010901 42.408 191 110 0 860 1050 692 882 8.28e-39 158
Msa0115880 MtrunA17_Chr1g0195601 32.024 509 281 14 611 1067 23 518 1.64e-51 198
Msa0115880 MtrunA17_Chr0c12g0493631 34.501 371 212 9 803 1147 125 490 3.52e-51 193
Msa0115880 MtrunA17_Chr8g0355291 31.207 439 280 10 808 1227 508 943 5.62e-51 197
Msa0115880 MtrunA17_Chr8g0355291 47.644 191 96 1 611 797 242 432 4.25e-39 159
Msa0115880 MtrunA17_Chr8g0392581 29.955 444 279 12 808 1227 533 968 1.92e-50 195
Msa0115880 MtrunA17_Chr8g0392581 50.794 189 89 2 613 797 268 456 6.50e-45 177
Msa0115880 MtrunA17_Chr1g0208961 30.505 436 274 12 808 1221 587 1015 1.98e-49 192
Msa0115880 MtrunA17_Chr1g0208961 46.667 195 100 1 611 801 322 516 9.18e-44 174
Msa0115880 MtrunA17_Chr8g0354491 50.658 152 73 2 1011 1160 1 152 2.91e-49 171
Msa0115880 MtrunA17_Chr5g0442401 31.805 349 220 7 801 1135 526 870 4.52e-44 175
Msa0115880 MtrunA17_Chr5g0442401 39.500 200 108 2 615 801 184 383 6.37e-37 152
Msa0115880 MtrunA17_Chr8g0354471 59.167 120 43 2 597 710 84 203 3.94e-40 147
Msa0115880 MtrunA17_Chr4g0067511 42.408 191 110 0 860 1050 341 531 4.41e-39 158
Msa0115880 MtrunA17_Chr4g0067511 34.356 163 77 5 719 851 25 187 1.50e-18 92.0
Msa0115880 MtrunA17_Chr4g0077061 33.537 328 160 9 803 1104 883 1178 1.83e-37 153
Msa0115880 MtrunA17_Chr4g0077061 38.073 218 120 4 598 801 585 801 7.19e-35 145
Msa0115880 MtrunA17_Chr8g0355531 34.228 149 95 2 931 1077 3 150 1.20e-20 90.5
Msa0115880 MtrunA17_Chr4g0067501 58.621 58 24 0 664 721 30 87 4.50e-16 74.7
Msa0115880 MtrunA17_Chr1g0148291 51.515 66 32 0 1163 1228 50 115 7.92e-15 72.8
Msa0115880 MtrunA17_Chr8g0355521 46.970 66 35 0 874 939 40 105 6.56e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115880 AT3G26560.1 89.408 963 101 1 310 1271 206 1168 0.0 1789
Msa0115880 AT1G32490.2 57.053 638 272 2 611 1246 387 1024 0.0 808
Msa0115880 AT1G32490.1 57.053 638 272 2 611 1246 397 1034 0.0 808
Msa0115880 AT2G35340.1 55.039 645 288 2 604 1246 390 1034 0.0 788
Msa0115880 AT2G35340.2 55.039 645 288 2 604 1246 252 896 0.0 786
Msa0115880 AT5G13010.1 48.511 806 375 10 453 1238 399 1184 0.0 778
Msa0115880 AT4G16680.2 56.037 646 275 4 612 1252 129 770 0.0 769
Msa0115880 AT3G62310.1 51.729 665 298 7 611 1257 54 713 0.0 715
Msa0115880 AT2G47250.1 50.657 685 308 9 591 1257 45 717 0.0 714
Msa0115880 AT4G18465.1 47.766 649 315 6 610 1235 40 687 0.0 627
Msa0115880 AT1G26370.1 44.012 693 328 7 603 1238 28 717 0.0 595
Msa0115880 AT1G27900.1 45.212 637 325 9 617 1229 3 639 0.0 565
Msa0115880 AT3G62310.3 56.290 469 192 3 613 1068 56 524 0.0 557
Msa0115880 AT3G62310.2 56.410 468 191 3 611 1065 54 521 0.0 554
Msa0115880 AT4G16680.1 61.391 417 157 1 612 1028 209 621 1.44e-178 542
Msa0115880 AT1G27900.3 47.566 534 271 5 617 1141 3 536 9.87e-169 513
Msa0115880 AT1G27900.2 47.566 534 271 5 617 1141 3 536 3.76e-168 511
Msa0115880 AT5G10370.1 38.235 646 355 14 618 1231 306 939 2.72e-122 417
Msa0115880 AT4G01020.1 37.842 658 362 16 609 1231 291 936 1.02e-117 404
Msa0115880 AT5G14900.1 40.433 277 156 5 977 1245 3 278 1.27e-66 228
Msa0115880 AT2G35920.1 34.004 447 263 13 797 1221 477 913 1.48e-58 220
Msa0115880 AT2G35920.1 46.939 196 100 2 610 801 220 415 5.01e-44 174
Msa0115880 AT2G35920.2 34.404 436 255 13 810 1221 427 855 1.51e-58 219
Msa0115880 AT2G35920.2 46.939 196 100 2 610 801 162 357 6.87e-44 174
Msa0115880 AT2G35920.3 34.004 447 263 13 797 1221 509 945 4.48e-58 219
Msa0115880 AT2G35920.3 46.939 196 100 2 610 801 252 447 6.40e-44 174
Msa0115880 AT1G33390.2 41.877 277 127 5 611 853 234 510 1.78e-54 209
Msa0115880 AT1G33390.2 29.832 476 266 6 859 1266 646 1121 7.91e-54 207
Msa0115880 AT1G33390.1 41.877 277 127 5 611 853 234 510 1.78e-54 209
Msa0115880 AT1G33390.1 29.832 476 266 6 859 1266 646 1121 7.91e-54 207
Msa0115880 AT1G58060.1 30.816 490 268 11 803 1223 890 1377 2.76e-54 209
Msa0115880 AT1G58060.1 41.414 198 100 4 615 797 611 807 8.37e-35 145
Msa0115880 AT2G01130.2 31.364 440 277 11 808 1227 413 847 1.47e-52 202
Msa0115880 AT2G01130.2 44.118 238 116 5 564 797 114 338 4.64e-46 181
Msa0115880 AT2G01130.1 31.364 440 277 11 808 1227 478 912 2.96e-52 201
Msa0115880 AT2G01130.1 44.118 238 116 5 564 797 179 403 6.66e-46 181
Msa0115880 AT2G30800.1 32.192 438 256 12 810 1222 533 954 1.29e-48 190
Msa0115880 AT2G30800.1 44.330 194 100 3 615 801 184 376 3.28e-44 176
Msa0115880 AT2G30800.2 33.671 395 236 10 810 1182 190 580 1.30e-48 189
Msa0115880 AT1G06670.1 32.653 392 236 10 810 1179 557 942 9.77e-48 187
Msa0115880 AT1G06670.1 41.538 195 108 2 613 801 212 406 3.06e-41 166
Msa0115880 AT1G06670.2 32.653 392 236 10 810 1179 557 942 1.26e-47 187
Msa0115880 AT1G06670.2 41.538 195 108 2 613 801 212 406 3.89e-41 166
Msa0115880 AT1G58050.1 33.152 368 221 6 807 1151 861 1226 1.56e-47 187
Msa0115880 AT1G58050.1 39.604 202 103 5 615 801 594 791 1.22e-32 138
Msa0115880 AT1G48650.2 30.204 490 302 15 759 1227 522 992 2.07e-47 186
Msa0115880 AT1G48650.2 47.783 203 98 3 615 813 296 494 2.57e-44 176
Msa0115880 AT1G48650.1 30.204 490 302 15 759 1227 522 992 3.53e-47 185
Msa0115880 AT1G48650.1 47.783 203 98 3 615 813 296 494 3.14e-44 176
Msa0115880 AT5G04895.1 31.293 441 277 12 808 1227 519 954 5.63e-47 184
Msa0115880 AT5G04895.1 44.076 211 104 2 592 798 244 444 4.61e-43 172
Msa0115880 AT2G47680.1 31.048 496 260 17 617 1053 25 497 2.29e-38 156

Find 367 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAGGTGATTTCTGTTTC+TGG 0.147409 1_3:-34782214 Msa0115880:CDS
GTGGTTAGGACAGGGCTTTC+TGG 0.153388 1_3:-34782064 Msa0115880:CDS
TGACTGATGGTATGCTTCTT+AGG 0.176733 1_3:-34781187 Msa0115880:CDS
GCATCCAAGTAATCGCTTTC+TGG 0.216870 1_3:+34780915 None:intergenic
CTTCCTCAGCACCTTCTTCT+TGG 0.218341 1_3:+34781882 None:intergenic
TTACTCAAACGCCATGAATT+TGG 0.225504 1_3:+34776770 None:intergenic
ACAGAGATAGGCACGATAAA+AGG 0.240748 1_3:-34782552 Msa0115880:CDS
CGAGGGTCTTCTAACCAAAT+TGG 0.244680 1_3:-34780262 Msa0115880:CDS
CCCCAAATGGCTTGTTGAAT+TGG 0.261022 1_3:-34776885 Msa0115880:CDS
ATTGATATTCAGGTACAAAT+TGG 0.265341 1_3:-34777140 Msa0115880:intron
TAGGCCTCCTTCTTCCATTC+TGG 0.268079 1_3:+34781560 None:intergenic
ATGCTAAAGAGGTTGTTAAA+AGG 0.273687 1_3:-34782252 Msa0115880:CDS
TATGGGAAAACCATTACTTT+TGG 0.283612 1_3:-34781539 Msa0115880:CDS
ATTTCTAGGGTGATGGATAC+TGG 0.286341 1_3:-34782355 Msa0115880:CDS
AAGAGAGTTGCAGAAGAGTT+TGG 0.288764 1_3:-34781287 Msa0115880:CDS
ACAGAGATAGACGCGATAAA+AGG 0.291005 1_3:-34782594 Msa0115880:CDS
GACATTCTTCTCTTCTTAAC+TGG 0.292311 1_3:-34780846 Msa0115880:CDS
TATGCTTCTTAGGGAAATAT+TGG 0.294663 1_3:-34781177 Msa0115880:CDS
TGCTTGGGCTTGTTTCTCCC+TGG 0.296594 1_3:+34780107 None:intergenic
GCCAATTCAACAAGCCATTT+GGG 0.296710 1_3:+34776884 None:intergenic
GTATCTTTCACTTGTATCTA+AGG 0.302855 1_3:-34783082 Msa0115880:CDS
AAGGTCAAAGCTTTCTCTTC+AGG 0.305764 1_3:-34781513 Msa0115880:CDS
GCACAACAATTGATTGCTTC+GGG 0.306068 1_3:-34781962 Msa0115880:CDS
ACTACTGCTGATACTATAAT+TGG 0.308344 1_3:+34776501 None:intergenic
GGTATATATGAATGAATTAA+AGG 0.308495 1_3:+34783200 None:intergenic
TTTATAAAGGAAGAATTTCT+AGG 0.309424 1_3:-34782369 Msa0115880:CDS
AGATTTATCCTTTGAATCTC+TGG 0.319910 1_3:+34780417 None:intergenic
AACCAAATTGGGTAGGAAAA+TGG 0.322701 1_3:-34780250 Msa0115880:CDS
TGGTTAGGACAGGGCTTTCT+GGG 0.326416 1_3:-34782063 Msa0115880:CDS
AGTCTGGATCATGGCAATTA+TGG 0.326837 1_3:+34780149 None:intergenic
TGTTCCAGAGGCAGCCAGAC+TGG 0.327825 1_3:-34776970 Msa0115880:CDS
TCAAGGCGTGGTGGTGGTTC+AGG 0.328786 1_3:-34782412 Msa0115880:CDS
CAAGGACGATTGAGATCCTT+TGG 0.329151 1_3:+34781662 None:intergenic
AGAGATTCAAAGGATAAATC+TGG 0.329310 1_3:-34780415 Msa0115880:CDS
TTCCGTTTGCTCATCTTTGT+AGG 0.330844 1_3:+34776836 None:intergenic
TTTATAAACCATATACAATT+CGG 0.332313 1_3:+34782384 None:intergenic
CAAGGGTTCTGTAACCTTCC+TGG 0.336478 1_3:+34777032 None:intergenic
GAAGAGTTTGGGTGTAGATT+AGG 0.337984 1_3:-34781275 Msa0115880:CDS
TGTAACATCTTCACCATTCC+TGG 0.338416 1_3:-34780975 Msa0115880:CDS
TGCACGCCCAGCTCTTTGTT+TGG 0.340691 1_3:+34780518 None:intergenic
TACACCACCAGAGGTAAAAT+TGG 0.344614 1_3:-34781350 Msa0115880:CDS
GGATTCTTGAAGATCTTAAC+AGG 0.345250 1_3:+34781785 None:intergenic
TTTGTTGTTGCTTTGTTCAA+TGG 0.347653 1_3:-34783145 Msa0115880:CDS
ATAGAGGCAGAGACAGAGAT+AGG 0.349241 1_3:-34782522 Msa0115880:CDS
AGCACAACAATTGATTGCTT+CGG 0.351597 1_3:-34781963 Msa0115880:CDS
AGCCAATTCAACAAGCCATT+TGG 0.351614 1_3:+34776883 None:intergenic
ATGTACTTGATTACGGTATC+AGG 0.357379 1_3:+34781209 None:intergenic
GCTTGGGCTTGTTTCTCCCT+GGG 0.368210 1_3:+34780108 None:intergenic
AGCCTTCTTCTGATCTGCTT+GGG 0.369877 1_3:+34780092 None:intergenic
AGGTGAGCCCGAATTGTATA+TGG 0.370936 1_3:-34782392 Msa0115880:CDS
CAAGAATCCAGAAGGTTCTC+TGG 0.373991 1_3:-34781771 Msa0115880:CDS
TGAGAAGAGCCCAGGATGTT+AGG 0.374945 1_3:-34779954 Msa0115880:CDS
CTTCCATTCTGGCATATCAT+AGG 0.376561 1_3:+34781571 None:intergenic
CATGGCGGAAATTAGTGCTT+GGG 0.379330 1_3:+34780317 None:intergenic
TCTGCCACTTTGAAGAATCT+TGG 0.380246 1_3:+34776860 None:intergenic
AGAGAGTTGCAGAAGAGTTT+GGG 0.382920 1_3:-34781286 Msa0115880:CDS
GGTTGTTAAAAGGGATCAAC+AGG 0.382981 1_3:-34782242 Msa0115880:CDS
GTGGTTACAGAGATAGAGAT+AGG 0.389220 1_3:-34782690 Msa0115880:CDS
CAATACTAAGTTCAAGGCTT+TGG 0.391256 1_3:-34782827 Msa0115880:CDS
GCTCCAGTCTGCGCTTATAA+AGG 0.392394 1_3:-34781735 Msa0115880:CDS
CACCTCCAATACTAAGTTCA+AGG 0.392675 1_3:-34782833 Msa0115880:CDS
TACTTGCTGTTTATGAATCC+TGG 0.393565 1_3:-34780035 Msa0115880:CDS
GCCCAGGAGTTGAGGGGTGT+TGG 0.394526 1_3:-34781602 Msa0115880:CDS
TTATAAACCATATACAATTC+GGG 0.395704 1_3:+34782385 None:intergenic
AAACAAAGAGCTGGGCGTGC+AGG 0.401401 1_3:-34780516 Msa0115880:CDS
GCTGAGTTCATCACCGAGTT+AGG 0.401410 1_3:-34783012 Msa0115880:CDS
GGACAGGGCTTTCTGGGATC+AGG 0.403318 1_3:-34782057 Msa0115880:CDS
AGCCAACACCCCTCAACTCC+TGG 0.404405 1_3:+34781600 None:intergenic
CGAAGGATGGGCCAGTGGTT+AGG 0.409100 1_3:-34782078 Msa0115880:CDS
TTGGCAGACGCTTGTGATAT+CGG 0.409314 1_3:+34780537 None:intergenic
GAATTGTATATGGTTTATAA+AGG 0.409577 1_3:-34782382 Msa0115880:CDS
GAAGCAAGGTCTTGATTCCT+TGG 0.410523 1_3:-34780568 Msa0115880:CDS
ACAAGATGGATTGAAGAAAC+TGG 0.410966 1_3:-34783106 Msa0115880:CDS
TAGCCTTCTTCTGATCTGCT+TGG 0.411871 1_3:+34780091 None:intergenic
CATGAGAGAATGAAGGGATT+AGG 0.413549 1_3:-34780789 Msa0115880:CDS
CAGAGATAGGCACGATAAAA+GGG 0.415527 1_3:-34782551 Msa0115880:CDS
ATATTTGATCCTGCTCCTCC+TGG 0.417235 1_3:-34780699 Msa0115880:CDS
TCATTATTAGTTAACGTCAA+TGG 0.418182 1_3:-34776653 Msa0115880:three_prime_UTR
GAAATTAGTGCTTGGGGTGA+TGG 0.418905 1_3:+34780324 None:intergenic
CCATGAGAGAACAATTTATA+CGG 0.419111 1_3:-34781108 Msa0115880:CDS
AGGAATCAAGACCTTGCTTC+GGG 0.422101 1_3:+34780571 None:intergenic
CAAAGGATCTCAATCGTCCT+TGG 0.426287 1_3:-34781661 Msa0115880:CDS
CAAAGCCTTGAACTTAGTAT+TGG 0.426908 1_3:+34782828 None:intergenic
CTCTGGAACAAAGCTGAACT+TGG 0.427399 1_3:+34776983 None:intergenic
TGGTTATGCCATTCGGTTTG+AGG 0.428268 1_3:-34781243 Msa0115880:CDS
GTGATTGGTGAAACCGGTTC+GGG 0.429952 1_3:-34781413 Msa0115880:CDS
GCTGGGCGTGCAGGGCGTAC+TGG 0.430164 1_3:-34780507 Msa0115880:CDS
ATGGAGCAGCTTTACAGTCT+TGG 0.431319 1_3:-34780297 Msa0115880:CDS
CAGAGATAGACGCGATAAAA+GGG 0.431734 1_3:-34782593 Msa0115880:CDS
ACAGCCAGAAAGCGATTACT+TGG 0.433928 1_3:-34780919 Msa0115880:CDS
CAAGGGAAGAAGATCCTTCC+CGG 0.434030 1_3:+34782150 None:intergenic
CGTGCAGGGCGTACTGGACC+TGG 0.436478 1_3:-34780501 Msa0115880:CDS
GAGAACCTTGTCGCCGGTGC+CGG 0.436660 1_3:+34783035 None:intergenic
TCAGGCTGTCCATGATAATC+AGG 0.437704 1_3:-34781444 Msa0115880:CDS
TGACTGTTCTGCTGGAGATC+AGG 0.437746 1_3:-34776561 Msa0115880:three_prime_UTR
GCACGACCCAGAGAACCTTC+TGG 0.439947 1_3:+34781764 None:intergenic
GCTTTACAGTCTTGGAGCAT+TGG 0.440040 1_3:-34780289 Msa0115880:CDS
TGCTAAAGAGGTTGTTAAAA+GGG 0.440220 1_3:-34782251 Msa0115880:CDS
TGTGATTGGTGAAACCGGTT+CGG 0.440509 1_3:-34781414 Msa0115880:CDS
CCGTATAAATTGTTCTCTCA+TGG 0.441201 1_3:+34781108 None:intergenic
ATCAGTCATGTACTTGATTA+CGG 0.441766 1_3:+34781202 None:intergenic
TGACCCAGTCTGGCTGCCTC+TGG 0.442230 1_3:+34776966 None:intergenic
CTAGGAAGGGCACTATAAAC+AGG 0.443729 1_3:+34780738 None:intergenic
GCTTTCTGGGATCAGGATTG+TGG 0.445070 1_3:-34782050 Msa0115880:CDS
GAGATGAGTATGAAGATGAA+AGG 0.446545 1_3:-34782477 Msa0115880:CDS
GAAGAGATAGACGCAGAGAT+AGG 0.446604 1_3:-34782663 Msa0115880:CDS
AAGGGTTCTGTAACCTTCCT+GGG 0.451628 1_3:+34777033 None:intergenic
CTTTCACCTGACTCTGGCAT+AGG 0.452045 1_3:+34781632 None:intergenic
CTCCTTCAGGTTCTGTCAAG+TGG 0.452113 1_3:+34780868 None:intergenic
AAGAGAAGAATGTCTCCTTC+AGG 0.452741 1_3:+34780855 None:intergenic
TGACGTTAACTAATAATGAT+AGG 0.452856 1_3:+34776657 None:intergenic
AGGCGGTGCCGGTGAGAGAA+TGG 0.454381 1_3:+34783220 None:intergenic
GATACCACGAGCCAAATTCA+TGG 0.454417 1_3:-34776781 Msa0115880:CDS
TTCCTAGTGAAATGCAATCT+AGG 0.458706 1_3:-34780722 Msa0115880:CDS
AATCATAATGACTGTTCTGC+TGG 0.458961 1_3:-34776569 Msa0115880:three_prime_UTR
TTTCGGACTGCTGAAGCAGC+TGG 0.461323 1_3:-34781078 Msa0115880:CDS
ACAGGTAAAATGATCAGCTC+AGG 0.463564 1_3:+34780756 None:intergenic
ATCAGGAAGGCTATCACTGC+AGG 0.464734 1_3:-34777085 Msa0115880:CDS
ATCCTGCTCCTCCTGGGAAA+AGG 0.465549 1_3:-34780692 Msa0115880:CDS
AGGAAGTTGGTTATGCCATT+CGG 0.466069 1_3:-34781250 Msa0115880:CDS
CTCTGCCCTTGCAAGAAGGC+GGG 0.466170 1_3:+34781830 None:intergenic
CTAATCCCTTCATTCTCTCA+TGG 0.466689 1_3:+34780790 None:intergenic
AAGGAATCAAGACCTTGCTT+CGG 0.467358 1_3:+34780570 None:intergenic
AGATGAGTATGAAGATGAAA+GGG 0.467802 1_3:-34782476 Msa0115880:CDS
TTTAGGTTTAGGAGGAAGAA+TGG 0.468545 1_3:+34782888 None:intergenic
GACTGATGGTATGCTTCTTA+GGG 0.468559 1_3:-34781186 Msa0115880:CDS
CCATGGCGGAAATTAGTGCT+TGG 0.470485 1_3:+34780316 None:intergenic
TGGGATCAGGATTGTGGAGG+AGG 0.470952 1_3:-34782044 Msa0115880:CDS
TCTTCATACCTGTCCATTGG+TGG 0.472460 1_3:+34782721 None:intergenic
CTGAGTAGTCTTACCCGAAC+CGG 0.472985 1_3:+34781400 None:intergenic
AATGAGTTCTCCTGAGAGAT+GGG 0.473403 1_3:-34781987 Msa0115880:CDS
GAATGGAAGAAGGAGGCCTA+TGG 0.473911 1_3:-34781557 Msa0115880:CDS
ATGTTTCTCAGATGGCTACT+AGG 0.474096 1_3:-34782285 Msa0115880:CDS
ATCATTATTTGAGTCAGAGT+TGG 0.475302 1_3:+34776457 None:intergenic
TACACTGGCAAGCAGCATCT+TGG 0.475617 1_3:+34780200 None:intergenic
AGCCTTGAACTTAGTATTGG+AGG 0.475684 1_3:+34782831 None:intergenic
AGTGATAGCCTTCCTGATCT+TGG 0.475703 1_3:+34777090 None:intergenic
AGTTTCTTCAATCCATCTTG+TGG 0.476723 1_3:+34783108 None:intergenic
TAGAGACGATAACACTTTCC+AGG 0.477171 1_3:+34780483 None:intergenic
GAAGTTGTTTCCTAACATCC+TGG 0.479069 1_3:+34779944 None:intergenic
GAACTTGGATGAATATATAC+AGG 0.479467 1_3:+34776998 None:intergenic
TGTAGATTAGGAGAGGAAGT+TGG 0.479479 1_3:-34781263 Msa0115880:CDS
GAGGAAGAGCTCGGAGGAGG+AGG 0.481493 1_3:-34782128 Msa0115880:CDS
GCGTCTGCCAAACAAAGAGC+TGG 0.482148 1_3:-34780525 Msa0115880:CDS
GGCATCTTGCCCAGGAGTTG+AGG 0.482712 1_3:-34781610 Msa0115880:CDS
TAGATTGCATTTCACTAGGA+AGG 0.482715 1_3:+34780724 None:intergenic
GATAAAAGAGATTATAGAAG+AGG 0.483470 1_3:-34782628 Msa0115880:CDS
CCTCATGGAAAGACTCAACT+TGG 0.483505 1_3:+34782189 None:intergenic
TCTATACTGAGAGTGCATAT+AGG 0.483696 1_3:-34780464 Msa0115880:CDS
GAGGGTCTTCTAACCAAATT+GGG 0.483792 1_3:-34780261 Msa0115880:CDS
TGTTGTGCTTCCCATCTCTC+AGG 0.484880 1_3:+34781977 None:intergenic
TCGTGGTATATGACCCAGTC+TGG 0.486418 1_3:+34776956 None:intergenic
ATAGAGGCAGAGACAGAGAT+AGG 0.486601 1_3:-34782564 Msa0115880:CDS
TCATTCTCTCATGGAGAGAC+TGG 0.488212 1_3:+34780799 None:intergenic
CTCCTCCGAGCTCTTCCTCA+AGG 0.488711 1_3:+34782132 None:intergenic
TAAGATGGTCACCCTCTGCC+TGG 0.488749 1_3:+34780061 None:intergenic
GAGGCTTCTTTGACTATCGA+TGG 0.488866 1_3:-34780642 Msa0115880:CDS
TACTCTTAGCATGAAAGCTA+TGG 0.491164 1_3:-34780385 Msa0115880:CDS
TTTGGTTCATGTTTCTCAGA+TGG 0.491509 1_3:-34782293 Msa0115880:CDS
TGAATCTCTGGAATTGCAGT+AGG 0.492249 1_3:+34780429 None:intergenic
GAAGATTGCTAATGCTAAAG+AGG 0.492486 1_3:-34782263 Msa0115880:CDS
AATCAGGTATTGGTTGTGAT+TGG 0.492980 1_3:-34781428 Msa0115880:CDS
GCATCTTGCCCAGGAGTTGA+GGG 0.494244 1_3:-34781609 Msa0115880:CDS
TTCGTTTCGGACGAATCCGC+AGG 0.497110 1_3:-34782104 Msa0115880:CDS
CGTATAAATTGTTCTCTCAT+GGG 0.498273 1_3:+34781109 None:intergenic
GAAATCTTACTTATCCATGA+TGG 0.500945 1_3:+34779918 None:intergenic
GCTCCTTTATAAGCGCAGAC+TGG 0.501117 1_3:+34781732 None:intergenic
AGGAAGAATTTCTAGGGTGA+TGG 0.501637 1_3:-34782362 Msa0115880:CDS
GAATGAATTAAAGGCGGTGC+CGG 0.502426 1_3:+34783209 None:intergenic
TGACCTTTGCCCAAAAGTAA+TGG 0.502877 1_3:+34781529 None:intergenic
TTTCTCTTAAAGCAAGGTCC+TGG 0.503512 1_3:-34776721 Msa0115880:three_prime_UTR
GAATGAGTTCTCCTGAGAGA+TGG 0.505757 1_3:-34781988 Msa0115880:CDS
AATCCGCAGGACTCGAAGGA+TGG 0.505790 1_3:-34782091 Msa0115880:CDS
GAAGACCCTATGCCAGAGTC+AGG 0.505896 1_3:-34781638 Msa0115880:CDS
ATCCAACATAAAATGTATCC+AGG 0.506849 1_3:+34776703 None:intergenic
TGACATTGCAGCCACCCGAC+GGG 0.508524 1_3:+34781316 None:intergenic
ATTCGGTTTGAGGATTGCAC+TGG 0.508837 1_3:-34781233 Msa0115880:CDS
TTTCACCTGACTCTGGCATA+GGG 0.509022 1_3:+34781633 None:intergenic
AGGTGAAAGGCATCTTGCCC+AGG 0.509956 1_3:-34781618 Msa0115880:CDS
TTGGTTGTGATTGGTGAAAC+CGG 0.510358 1_3:-34781419 Msa0115880:CDS
AATATTGCCAGTCTGGATCA+TGG 0.510509 1_3:+34780140 None:intergenic
TCTTAGTAATTCTTTATCCG+TGG 0.510868 1_3:+34783272 None:intergenic
AACAAAGAGCTGGGCGTGCA+GGG 0.511281 1_3:-34780515 Msa0115880:CDS
AAAGGATCTCAATCGTCCTT+GGG 0.512933 1_3:-34781660 Msa0115880:CDS
TAACAGTCATAGACCCCAAA+TGG 0.513433 1_3:-34776898 Msa0115880:CDS
TGTCCATGATAATCAGGTAT+TGG 0.513575 1_3:-34781438 Msa0115880:CDS
GATGGGCCAGTGGTTAGGAC+AGG 0.514036 1_3:-34782073 Msa0115880:CDS
AGAGTTCGAACAAAGTAATC+CGG 0.514956 1_3:+34782928 None:intergenic
AGAAAACGGTGCTGAGATGC+CGG 0.515041 1_3:-34782947 Msa0115880:CDS
GATGAACCCGCCTTCTTGCA+AGG 0.515526 1_3:-34781836 Msa0115880:CDS
AAATTGGATATCGTGAGTGC+TGG 0.517620 1_3:-34777124 Msa0115880:CDS
AGATGCCTTTCACCTGACTC+TGG 0.517794 1_3:+34781626 None:intergenic
ACTTATGATGACGAGGAAGA+TGG 0.518547 1_3:-34781914 Msa0115880:CDS
ATCCGCAGGACTCGAAGGAT+GGG 0.520699 1_3:-34782090 Msa0115880:CDS
CAACCAATACCTGATTATCA+TGG 0.520780 1_3:+34781435 None:intergenic
TTATAAAGGAAGAATTTCTA+GGG 0.521085 1_3:-34782368 Msa0115880:CDS
CAAGTTCAGCTTTGTTCCAG+AGG 0.522315 1_3:-34776982 Msa0115880:CDS
CTGCAATTCCAGAGATTCAA+AGG 0.523408 1_3:-34780425 Msa0115880:CDS
TTAGAATCTCACACCGGCAC+CGG 0.523669 1_3:-34783048 Msa0115880:CDS
ATCCTACAAAGATGAGCAAA+CGG 0.524521 1_3:-34776838 Msa0115880:CDS
AAGAAAGCGCGGCGGTACAG+AGG 0.524898 1_3:-34783253 Msa0115880:CDS
CAAGTTGAGTCTTTCCATGA+GGG 0.526227 1_3:-34782188 Msa0115880:CDS
AGAGATTCAAGGCGTGGTGG+TGG 0.527162 1_3:-34782418 Msa0115880:CDS
GTTTGGGTGTAGATTAGGAG+AGG 0.527613 1_3:-34781270 Msa0115880:CDS
AGGGATGTTGATCAACATAC+CGG 0.528223 1_3:-34782169 Msa0115880:CDS
GAATCTCTGGAATTGCAGTA+GGG 0.529752 1_3:+34780430 None:intergenic
TGGGAAAAGGAAAGTGGTTG+TGG 0.530195 1_3:-34780679 Msa0115880:CDS
ACCGCTGAAATTCCACAAGA+TGG 0.530335 1_3:-34783120 Msa0115880:CDS
CTTAGTAATTCTTTATCCGT+GGG 0.531364 1_3:+34783273 None:intergenic
GTTCCAGAGGCAGCCAGACT+GGG 0.531384 1_3:-34776969 Msa0115880:CDS
GAGAATGGTGGTGATGAGAA+AGG 0.532112 1_3:-34782451 Msa0115880:CDS
GTCTCTCCATGAGAGAATGA+AGG 0.535447 1_3:-34780796 Msa0115880:CDS
CGGAGGAGGAGGATTCGTTT+CGG 0.537448 1_3:-34782117 Msa0115880:CDS
GCTCTGCCCTTGCAAGAAGG+CGG 0.538014 1_3:+34781829 None:intergenic
CTGCTTGCCAGTGTAGACCT+TGG 0.538204 1_3:-34780192 Msa0115880:CDS
TGGATGTACTCAACCCCGTC+GGG 0.539677 1_3:-34781330 Msa0115880:CDS
CACACAGTATCTTGCTGAAG+TGG 0.540682 1_3:-34781375 Msa0115880:CDS
TTGGACAGTGGTGGATCCAT+CGG 0.540793 1_3:+34780219 None:intergenic
GATAAAAGGGGAGATGATAG+AGG 0.541014 1_3:-34782538 Msa0115880:CDS
CAGCCTATGATATGCCAGAA+TGG 0.544130 1_3:-34781574 Msa0115880:CDS
GAGATTCAAAGGATAAATCT+GGG 0.547489 1_3:-34780414 Msa0115880:CDS
AAGCAGATCAGAAGAAGGCT+AGG 0.547920 1_3:-34780089 Msa0115880:CDS
ATTAGTGCTTGGGGTGATGG+TGG 0.549116 1_3:+34780327 None:intergenic
TCGATCGTTGAGAAGAGCCC+AGG 0.549163 1_3:-34779962 Msa0115880:CDS
AGGGCAGAGCAGATACTCAA+TGG 0.549901 1_3:-34781816 Msa0115880:CDS
GAAACAACTTCTCTCCATCA+TGG 0.550162 1_3:-34779932 Msa0115880:CDS
GTCGTAGAGAAAGAGATTCA+AGG 0.550254 1_3:-34782429 Msa0115880:CDS
AGATGGAACCACCAATGGAC+AGG 0.550679 1_3:-34782729 Msa0115880:CDS
TCTCAGTTTCTCTTAAAGCA+AGG 0.550720 1_3:-34776727 Msa0115880:three_prime_UTR
TCATCTTCATACCTGTCCAT+TGG 0.552233 1_3:+34782718 None:intergenic
CGAGCTTGTAATGACAACTA+AGG 0.556337 1_3:-34776936 Msa0115880:CDS
AAAACAGATGGAACCACCAA+TGG 0.557169 1_3:-34782734 Msa0115880:CDS
TCTTCCCTTGAGGAAGAGCT+CGG 0.561057 1_3:-34782137 Msa0115880:CDS
TTCTGGGATCAGGATTGTGG+AGG 0.561534 1_3:-34782047 Msa0115880:CDS
GACGCTATACTCAAAGAAAA+CGG 0.561906 1_3:-34782961 Msa0115880:CDS
TCATTCCTCTGACTCGGTCG+AGG 0.561915 1_3:-34782989 Msa0115880:CDS
GAAGATGAAAGGGAAGAGAA+TGG 0.561956 1_3:-34782466 Msa0115880:CDS
AAGAATCCAGAAGGTTCTCT+GGG 0.562143 1_3:-34781770 Msa0115880:CDS
AAACAGCAAGTAGTGTAAGA+TGG 0.562402 1_3:+34780046 None:intergenic
AAGTTGTTTCCTAACATCCT+GGG 0.562595 1_3:+34779945 None:intergenic
AGGCTTCTTTGACTATCGAT+GGG 0.563289 1_3:-34780641 Msa0115880:CDS
CTTGAGGAAGAGCTCGGAGG+AGG 0.564495 1_3:-34782131 Msa0115880:CDS
ACTCTTAGCATGAAAGCTAT+GGG 0.568265 1_3:-34780384 Msa0115880:CDS
ATGACACTGTTTCTTCGCGC+AGG 0.568592 1_3:-34782021 Msa0115880:CDS
ATGTTGATCAACATCCCTCA+TGG 0.568775 1_3:+34782174 None:intergenic
AAATCTCATCACTGCATCCA+AGG 0.569527 1_3:+34780175 None:intergenic
ACAACAATTGATTGCTTCGG+GGG 0.569709 1_3:-34781960 Msa0115880:CDS
AACAAAGTTCTCAAAACACC+AGG 0.570853 1_3:+34779990 None:intergenic
GAAAGCCCTGTCCTAACCAC+TGG 0.573591 1_3:+34782067 None:intergenic
GCCAACACCCCTCAACTCCT+GGG 0.574566 1_3:+34781601 None:intergenic
AGCCCAAGCAGATCAGAAGA+AGG 0.575116 1_3:-34780094 Msa0115880:CDS
TCCTCCGAGCTCTTCCTCAA+GGG 0.575599 1_3:+34782133 None:intergenic
GTGACAATCAATCGCAACTC+AGG 0.575700 1_3:+34781044 None:intergenic
TATTTGATCCTGCTCCTCCT+GGG 0.576207 1_3:-34780698 Msa0115880:CDS
GAATTCCTCGACCGAGTCAG+AGG 0.576537 1_3:+34782984 None:intergenic
TTTCTAGGGTGATGGATACT+GGG 0.578143 1_3:-34782354 Msa0115880:CDS
CATGCTTGATTCAATTCCAA+AGG 0.578519 1_3:-34781678 Msa0115880:CDS
AGAAAGCGCGGCGGTACAGA+GGG 0.578526 1_3:-34783252 Msa0115880:CDS
TCCTCCTGGGAAAAGGAAAG+TGG 0.578565 1_3:-34780685 Msa0115880:CDS
AGATTGCATTTCACTAGGAA+GGG 0.578680 1_3:+34780725 None:intergenic
TCTCTTCTTAACTGGTCAAG+AGG 0.579392 1_3:-34780838 Msa0115880:CDS
GTTCTGTCAAGTGGATCTGT+AGG 0.579749 1_3:+34780877 None:intergenic
AATGGAAGAAGGAGGCCTAT+GGG 0.580157 1_3:-34781556 Msa0115880:CDS
GGCCCATCCTTCGAGTCCTG+CGG 0.581171 1_3:+34782088 None:intergenic
AGCAGCATCTTGGACAGTGG+TGG 0.581971 1_3:+34780210 None:intergenic
CGTCTGCCAAACAAAGAGCT+GGG 0.584543 1_3:-34780524 Msa0115880:CDS
TGGTTACAGAGATAGAGATA+GGG 0.586197 1_3:-34782689 Msa0115880:CDS
CTTTGGAATTGAATCAAGCA+TGG 0.587342 1_3:+34781679 None:intergenic
ATGAACCCGCCTTCTTGCAA+GGG 0.587783 1_3:-34781835 Msa0115880:CDS
GATCCACTTTGCAATTCCCA+CGG 0.588030 1_3:-34783289 Msa0115880:CDS
GGAGTGATGTACCAAGAAGA+AGG 0.591041 1_3:-34781893 Msa0115880:CDS
GACGAATCCGCAGGACTCGA+AGG 0.591891 1_3:-34782095 Msa0115880:CDS
TCTCTCCATGAGAGAATGAA+GGG 0.592596 1_3:-34780795 Msa0115880:CDS
TCACACCGGCACCGGCGACA+AGG 0.592845 1_3:-34783040 Msa0115880:CDS
CTGACATTGCAGCCACCCGA+CGG 0.593279 1_3:+34781315 None:intergenic
TCTGCTCTGCCCTTGCAAGA+AGG 0.593862 1_3:+34781826 None:intergenic
CTTGAACTTAGTATTGGAGG+TGG 0.595622 1_3:+34782834 None:intergenic
GGATCAACAGGTTTATGTGA+AGG 0.595752 1_3:-34782230 Msa0115880:CDS
CACAACAATTGATTGCTTCG+GGG 0.596516 1_3:-34781961 Msa0115880:CDS
GGAAGGATCTTCTTCCCTTG+AGG 0.597018 1_3:-34782147 Msa0115880:CDS
TCCACAGGAAAAGTTCTCCC+AGG 0.597379 1_3:+34780957 None:intergenic
TGATATGCCAGAATGGAAGA+AGG 0.597715 1_3:-34781567 Msa0115880:CDS
TTAGCATAAAGTATCTCCAC+AGG 0.597733 1_3:+34780942 None:intergenic
CAGGTAAAATGATCAGCTCA+GGG 0.598033 1_3:+34780757 None:intergenic
GTAACATCTTCACCATTCCT+GGG 0.599428 1_3:-34780974 Msa0115880:CDS
AGGAAAAGTTCTCCCAGGAA+TGG 0.599531 1_3:+34780962 None:intergenic
CCAAGCACTAATTTCCGCCA+TGG 0.601170 1_3:-34780316 Msa0115880:CDS
ATCCTAGATTGCATTTCACT+AGG 0.601198 1_3:+34780720 None:intergenic
GAGATAGACGCGATAAAAGG+GGG 0.603283 1_3:-34782591 Msa0115880:CDS
GGCTCCAAGATTCTTCAAAG+TGG 0.604340 1_3:-34776864 Msa0115880:CDS
GAAAATGGCTGAATTTCCGA+TGG 0.604452 1_3:-34780235 Msa0115880:CDS
TAGAGGCAGAGACAGAGATA+GGG 0.604822 1_3:-34782521 Msa0115880:CDS
CTCAGCGAGAACCTTGTCGC+CGG 0.604870 1_3:+34783029 None:intergenic
GGAGAACTCATTCTCTTCAA+CGG 0.604981 1_3:+34781998 None:intergenic
AAGATCTTCAAGAATCCAGA+AGG 0.605560 1_3:-34781779 Msa0115880:CDS
AATGTTTATAACCCGAAGCA+AGG 0.607007 1_3:-34780582 Msa0115880:CDS
AGCTTTCTCTTCAGGAACAG+AGG 0.607191 1_3:-34781505 Msa0115880:CDS
GACAGGTATGAAGATGATGA+TGG 0.607702 1_3:-34782712 Msa0115880:CDS
GTCAGAGGAATGACCTAACT+CGG 0.609583 1_3:+34782999 None:intergenic
CTATGCCAGAGTCAGGTGAA+AGG 0.610369 1_3:-34781631 Msa0115880:CDS
CCAAGTTGAGTCTTTCCATG+AGG 0.614903 1_3:-34782189 Msa0115880:CDS
TTCACAATCCATTCTCTCAC+CGG 0.617130 1_3:-34783228 Msa0115880:CDS
ATAATTGCCATGATCCAGAC+TGG 0.617453 1_3:-34780147 Msa0115880:CDS
TTGGATGTACTCAACCCCGT+CGG 0.620071 1_3:-34781331 Msa0115880:CDS
GCTTGAGATTGAGATGAATG+AGG 0.620819 1_3:-34781858 Msa0115880:CDS
GTTAGGTCATTCCTCTGACT+CGG 0.621065 1_3:-34782995 Msa0115880:CDS
ATGGGCCAGTGGTTAGGACA+GGG 0.622152 1_3:-34782072 Msa0115880:CDS
TCTTGGAGCATTGGATGACG+AGG 0.623443 1_3:-34780280 Msa0115880:CDS
AAGACTGTAAAGCTGCTCCA+TGG 0.623520 1_3:+34780299 None:intergenic
ATACAGGCTGATTCTCAACA+AGG 0.625575 1_3:+34777014 None:intergenic
TCTTCCTCGTCATCATAAGT+CGG 0.626888 1_3:+34781917 None:intergenic
GTAATCAAGTACATGACTGA+TGG 0.627672 1_3:-34781200 Msa0115880:CDS
GCAAGCAGCATCTTGGACAG+TGG 0.628844 1_3:+34780207 None:intergenic
ACACAGTATCTTGCTGAAGT+GGG 0.629135 1_3:-34781374 Msa0115880:CDS
TAGTTGTCATTACAAGCTCG+TGG 0.629768 1_3:+34776939 None:intergenic
CATCTTGCCCAGGAGTTGAG+GGG 0.632023 1_3:-34781608 Msa0115880:CDS
TCCATCTTGTGGAATTTCAG+CGG 0.633209 1_3:+34783119 None:intergenic
ATGGCGGAAATTAGTGCTTG+GGG 0.633377 1_3:+34780318 None:intergenic
ATGTACTCAACCCCGTCGGG+TGG 0.633797 1_3:-34781327 Msa0115880:CDS
GGACTCGAAGGATGGGCCAG+TGG 0.636577 1_3:-34782083 Msa0115880:CDS
ACTGCATCCAAGGTCTACAC+TGG 0.637206 1_3:+34780185 None:intergenic
AATCTCTGGAATTGCAGTAG+GGG 0.637991 1_3:+34780431 None:intergenic
TACAGGCTGATTCTCAACAA+GGG 0.638296 1_3:+34777015 None:intergenic
AGGGTTCTGTAACCTTCCTG+GGG 0.638892 1_3:+34777034 None:intergenic
GTTTAGGAGGAAGAATGGCG+TGG 0.641248 1_3:+34782893 None:intergenic
AGAGATAGACGCGATAAAAG+GGG 0.641387 1_3:-34782592 Msa0115880:CDS
GACATTGCAGCCACCCGACG+GGG 0.642068 1_3:+34781317 None:intergenic
AGAGAAAGAGATTCAAGGCG+TGG 0.643448 1_3:-34782424 Msa0115880:CDS
CCAATTCAACAAGCCATTTG+GGG 0.643577 1_3:+34776885 None:intergenic
AGATGATAGAGATCGCGCTA+AGG 0.646149 1_3:-34782797 Msa0115880:CDS
TCGTGGTATCTATCATAGAG+TGG 0.647803 1_3:+34776794 None:intergenic
GTCTTCTAACCAAATTGGGT+AGG 0.650387 1_3:-34780257 Msa0115880:CDS
AGAGATAGGCACGATAAAAG+GGG 0.650664 1_3:-34782550 Msa0115880:CDS
AACGCCATGAATTTGGCTCG+TGG 0.650714 1_3:+34776777 None:intergenic
AAACTTCTCCAAGATCAGGA+AGG 0.652256 1_3:-34777098 Msa0115880:CDS
TATCCGTGGGAATTGCAAAG+TGG 0.652770 1_3:+34783286 None:intergenic
AACTAAGGAATATATGCGCG+AGG 0.653120 1_3:-34776921 Msa0115880:CDS
AGTGCAATCCTCAAACCGAA+TGG 0.654921 1_3:+34781235 None:intergenic
TGTGGCTACAAACATTGCTG+AGG 0.657304 1_3:-34780661 Msa0115880:CDS
AGGTATGAAGATGATGATGG+TGG 0.658483 1_3:-34782709 Msa0115880:CDS
ATAGGGATCGATACGAGAGA+CGG 0.661507 1_3:-34782504 Msa0115880:CDS
TCAGGAAGGCTATCACTGCA+GGG 0.661516 1_3:-34777084 Msa0115880:CDS
TGTTGATCAACATACCGGGA+AGG 0.668243 1_3:-34782164 Msa0115880:CDS
GTACCAAGAAGAAGGTGCTG+AGG 0.669323 1_3:-34781885 Msa0115880:CDS
GGGATGTTGATCAACATACC+GGG 0.669348 1_3:-34782168 Msa0115880:CDS
TCCCTTGAGGAAGAGCTCGG+AGG 0.672667 1_3:-34782134 Msa0115880:CDS
CGGTTCGGGTAAGACTACTC+AGG 0.674149 1_3:-34781399 Msa0115880:CDS
GAAAGAGATTCAAGGCGTGG+TGG 0.675902 1_3:-34782421 Msa0115880:CDS
GAAGTGGGTTACACCACCAG+AGG 0.688109 1_3:-34781359 Msa0115880:CDS
ATCCACTTGACAGAACCTGA+AGG 0.691009 1_3:-34780870 Msa0115880:CDS
GGGATCGATACGAGAGACGG+AGG 0.691273 1_3:-34782501 Msa0115880:CDS
TCTGGCATAGGGTCTTCCCA+AGG 0.691663 1_3:+34781644 None:intergenic
ATATATGAATGAATTAAAGG+CGG 0.691933 1_3:+34783203 None:intergenic
CTTGGAGCATTGGATGACGA+GGG 0.694214 1_3:-34780279 Msa0115880:CDS
TTCATTCATATATACCACCG+AGG 0.701126 1_3:-34783193 Msa0115880:CDS
TATGCCAGAATGGAAGAAGG+AGG 0.704441 1_3:-34781564 Msa0115880:CDS
AAAGAATTACTAAGAAAGCG+CGG 0.704947 1_3:-34783264 Msa0115880:CDS
AAAATAGAGTAAAACCTCGG+TGG 0.705989 1_3:+34783179 None:intergenic
GGGTTCTGTAACCTTCCTGG+GGG 0.708919 1_3:+34777035 None:intergenic
TGATATCGGAGTAATAACCA+AGG 0.711436 1_3:+34780551 None:intergenic
AGATAGACGCGATAAAAGGG+GGG 0.717408 1_3:-34782590 Msa0115880:CDS
ACTGTAAAGCTGCTCCATGG+CGG 0.718612 1_3:+34780302 None:intergenic
GTATCCGACTTATGATGACG+AGG 0.723116 1_3:-34781921 Msa0115880:CDS
GATGAAAGGGAAGAGAATGG+TGG 0.732087 1_3:-34782463 Msa0115880:CDS
ACAAAGTTCTCAAAACACCA+GGG 0.753090 1_3:+34779991 None:intergenic
ACTGAATTAGAATCTCACAC+CGG 0.776430 1_3:-34783054 Msa0115880:CDS
GAATTACTAAGAAAGCGCGG+CGG 0.827075 1_3:-34783261 Msa0115880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGTTCAATAAATTAA+TGG - chr1_3:34779969-34779988 Msa0115880:CDS 10.0%
!!! TTTTAGTTCAATAAATTAAT+GGG - chr1_3:34779970-34779989 Msa0115880:CDS 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+AGG + chr1_3:34780053-34780072 None:intergenic 10.0%
!! TAATTATATTCTAAATTATG+TGG + chr1_3:34780677-34780696 None:intergenic 10.0%
!!! TCATTTTGTTATAATTTTTT+TGG - chr1_3:34781801-34781820 Msa0115880:CDS 10.0%
!!! ATCTATTTTTAAAAATACAA+AGG - chr1_3:34782040-34782059 Msa0115880:CDS 10.0%
!!! TACTTTAATTTGTTAATTAA+CGG - chr1_3:34782397-34782416 Msa0115880:CDS 10.0%
!! CAAAATCTAAAAATCAAAAT+AGG - chr1_3:34776479-34776498 Msa0115880:three_prime_UTR 15.0%
!! TTTATAAACCATATACAATT+CGG + chr1_3:34777413-34777432 None:intergenic 15.0%
!! TTGAGAGTAAAATAATTTAA+TGG - chr1_3:34780144-34780163 Msa0115880:CDS 15.0%
!! TTAAAAAAAGCTATAACAAA+CGG + chr1_3:34781657-34781676 None:intergenic 15.0%
!!! TTTTAACAAAGAAATTTTTC+AGG - chr1_3:34781716-34781735 Msa0115880:CDS 15.0%
!!! TTTAGATTTTGTATGAGTTT+CGG + chr1_3:34776470-34776489 None:intergenic 20.0%
!! ATATATGAATGAATTAAAGG+CGG + chr1_3:34776594-34776613 None:intergenic 20.0%
!! GGTATATATGAATGAATTAA+AGG + chr1_3:34776597-34776616 None:intergenic 20.0%
!! AAAGCAACAACAAAAAATTT+GGG + chr1_3:34776643-34776662 None:intergenic 20.0%
!! TTATAAACCATATACAATTC+GGG + chr1_3:34777412-34777431 None:intergenic 20.0%
!! GAATTGTATATGGTTTATAA+AGG - chr1_3:34777412-34777431 Msa0115880:intron 20.0%
!! TTTATAAAGGAAGAATTTCT+AGG - chr1_3:34777425-34777444 Msa0115880:intron 20.0%
!! TTATAAAGGAAGAATTTCTA+GGG - chr1_3:34777426-34777445 Msa0115880:intron 20.0%
!!! TCTTTTTTTAGCTTGTAAAT+TGG + chr1_3:34778324-34778343 None:intergenic 20.0%
!! TTACAAGCTAAAAAAAGAAT+TGG - chr1_3:34778326-34778345 Msa0115880:intron 20.0%
!!! GATATTTTATGTTATTGATC+CGG - chr1_3:34779175-34779194 Msa0115880:intron 20.0%
!!! ATATTTTATGTTATTGATCC+GGG - chr1_3:34779176-34779195 Msa0115880:intron 20.0%
!! AAAATAATTTAATGGTGAGA+TGG - chr1_3:34780152-34780171 Msa0115880:CDS 20.0%
!! TCATGTTATAAAAATTACCT+AGG + chr1_3:34780229-34780248 None:intergenic 20.0%
!! CAAATAAAAACCAAAAGAAA+AGG + chr1_3:34780764-34780783 None:intergenic 20.0%
!! GTAATAAGTTAATTGAAACA+TGG - chr1_3:34780853-34780872 Msa0115880:CDS 20.0%
!!! TTCAAATTTTTCAATTCCTT+CGG + chr1_3:34781336-34781355 None:intergenic 20.0%
!!! CTTTTTTTTATTCTAGTTGT+TGG + chr1_3:34781521-34781540 None:intergenic 20.0%
!! TAAAAAAAGCTATAACAAAC+GGG + chr1_3:34781656-34781675 None:intergenic 20.0%
!! GAAAGCTTCAAATAAAAAAT+CGG - chr1_3:34781738-34781757 Msa0115880:CDS 20.0%
!! ATCTCGAACAATAAATATTT+AGG - chr1_3:34781933-34781952 Msa0115880:CDS 20.0%
!! GAGTTATAAAATTAGAATGT+TGG + chr1_3:34782152-34782171 None:intergenic 20.0%
!! TAAAATATATAGAACTGAAG+TGG + chr1_3:34782226-34782245 None:intergenic 20.0%
!! CAAAGTAAAAAATACTACTT+GGG + chr1_3:34782514-34782533 None:intergenic 20.0%
!!! CAAGTAGTATTTTTTACTTT+GGG - chr1_3:34782513-34782532 Msa0115880:CDS 20.0%
! AAGCAACAACAAAAAATTTG+GGG + chr1_3:34776642-34776661 None:intergenic 25.0%
! CAAAGCAACAACAAAAAATT+TGG + chr1_3:34776644-34776663 None:intergenic 25.0%
!!! TCTTTCTCTTTTTTAGGTTT+AGG + chr1_3:34776920-34776939 None:intergenic 25.0%
!!! TGATTCTCTTTCTCTTTTTT+AGG + chr1_3:34776926-34776945 None:intergenic 25.0%
! TAGAGAAAAACAAAAACAGA+TGG - chr1_3:34777048-34777067 Msa0115880:CDS 25.0%
! GATAAAAGAGATTATAGAAG+AGG - chr1_3:34777166-34777185 Msa0115880:intron 25.0%
!! ATTTATACGGATGTTCTTTT+CGG - chr1_3:34778699-34778718 Msa0115880:intron 25.0%
!! TATTTTATGTTATTGATCCG+GGG - chr1_3:34779177-34779196 Msa0115880:intron 25.0%
!!! TCTTCTGTCATTTGATTTTT+TGG - chr1_3:34779442-34779461 Msa0115880:intron 25.0%
!!! AGAAAAGTTTTTACTTTTCC+AGG + chr1_3:34779780-34779799 None:intergenic 25.0%
!! TGGAAAAGTAAAAACTTTTC+TGG - chr1_3:34779779-34779798 Msa0115880:intron 25.0%
!!! TTTTTAGGTCTCTAAAGTTT+AGG - chr1_3:34780588-34780607 Msa0115880:CDS 25.0%
!! ATGCAACATTTGAGATAAAT+TGG + chr1_3:34780720-34780739 None:intergenic 25.0%
! AACATGCATTACAATACTTT+GGG + chr1_3:34780821-34780840 None:intergenic 25.0%
! AAACATGCATTACAATACTT+TGG + chr1_3:34780822-34780841 None:intergenic 25.0%
! GTCAAAATTACAACTAACAA+GGG - chr1_3:34780875-34780894 Msa0115880:CDS 25.0%
!!! AGTTAGGTTTTAGTTTATTC+AGG + chr1_3:34781237-34781256 None:intergenic 25.0%
! AAACTAAAACCTAACTTCAA+CGG - chr1_3:34781241-34781260 Msa0115880:CDS 25.0%
! TAAATTGCAAAAAACAGGTT+GGG + chr1_3:34781445-34781464 None:intergenic 25.0%
! TTAAATTGCAAAAAACAGGT+TGG + chr1_3:34781446-34781465 None:intergenic 25.0%
!! TGATGCACTAGATTTTTAAT+GGG - chr1_3:34782283-34782302 Msa0115880:CDS 25.0%
! CCAAAGTAAAAAATACTACT+TGG + chr1_3:34782515-34782534 None:intergenic 25.0%
!!! CCAAGTAGTATTTTTTACTT+TGG - chr1_3:34782512-34782531 Msa0115880:CDS 25.0%
! AATCATCAACATTGATATTC+AGG - chr1_3:34782644-34782663 Msa0115880:CDS 25.0%
! ATTGATATTCAGGTACAAAT+TGG - chr1_3:34782654-34782673 Msa0115880:CDS 25.0%
! TGACGTTAACTAATAATGAT+AGG + chr1_3:34783140-34783159 None:intergenic 25.0%
! TCATTATTAGTTAACGTCAA+TGG - chr1_3:34783141-34783160 Msa0115880:CDS 25.0%
!!! AATCTTGTACATATTTTTGC+TGG - chr1_3:34783164-34783183 Msa0115880:CDS 25.0%
CTTAGTAATTCTTTATCCGT+GGG + chr1_3:34776524-34776543 None:intergenic 30.0%
TCTTAGTAATTCTTTATCCG+TGG + chr1_3:34776525-34776544 None:intergenic 30.0%
AAAGAATTACTAAGAAAGCG+CGG - chr1_3:34776530-34776549 Msa0115880:three_prime_UTR 30.0%
GGAAAAATAGAGTAAAACCT+CGG + chr1_3:34776621-34776640 None:intergenic 30.0%
!! TTTGTTGTTGCTTTGTTCAA+TGG - chr1_3:34776649-34776668 Msa0115880:three_prime_UTR 30.0%
GTATCTTTCACTTGTATCTA+AGG - chr1_3:34776712-34776731 Msa0115880:three_prime_UTR 30.0%
!!! TTCTCTTTTTTAGGTTTAGG+AGG + chr1_3:34776917-34776936 None:intergenic 30.0%
AGATGAGTATGAAGATGAAA+GGG - chr1_3:34777318-34777337 Msa0115880:intron 30.0%
ATGCTAAAGAGGTTGTTAAA+AGG - chr1_3:34777542-34777561 Msa0115880:intron 30.0%
TGCTAAAGAGGTTGTTAAAA+GGG - chr1_3:34777543-34777562 Msa0115880:intron 30.0%
! AAAAGTAATGGTTTTCCCAT+AGG + chr1_3:34778256-34778275 None:intergenic 30.0%
! TATGGGAAAACCATTACTTT+TGG - chr1_3:34778255-34778274 Msa0115880:intron 30.0%
!! ATGGGAAAACCATTACTTTT+GGG - chr1_3:34778256-34778275 Msa0115880:intron 30.0%
! GCTAAAAAAAGAATTGGTTC+AGG - chr1_3:34778332-34778351 Msa0115880:intron 30.0%
ATCAGTCATGTACTTGATTA+CGG + chr1_3:34778595-34778614 None:intergenic 30.0%
TATGCTTCTTAGGGAAATAT+TGG - chr1_3:34778617-34778636 Msa0115880:intron 30.0%
CGTATAAATTGTTCTCTCAT+GGG + chr1_3:34778688-34778707 None:intergenic 30.0%
CCATGAGAGAACAATTTATA+CGG - chr1_3:34778686-34778705 Msa0115880:intron 30.0%
! CTTGATGCTGAAAAATTTTC+AGG - chr1_3:34778783-34778802 Msa0115880:intron 30.0%
AGATTTATCCTTTGAATCTC+TGG + chr1_3:34779380-34779399 None:intergenic 30.0%
AGAGATTCAAAGGATAAATC+TGG - chr1_3:34779379-34779398 Msa0115880:intron 30.0%
GAGATTCAAAGGATAAATCT+GGG - chr1_3:34779380-34779399 Msa0115880:intron 30.0%
TGTAAAAAATATTGCCAGTC+TGG + chr1_3:34779664-34779683 None:intergenic 30.0%
!!! AGACTGGCAATATTTTTTAC+AGG - chr1_3:34779663-34779682 Msa0115880:intron 30.0%
GAAATCTTACTTATCCATGA+TGG + chr1_3:34779879-34779898 None:intergenic 30.0%
TATTCAATCTCACCATTGAA+TGG - chr1_3:34780090-34780109 Msa0115880:CDS 30.0%
TAGAGTTCTACTATGATATG+TGG - chr1_3:34780377-34780396 Msa0115880:CDS 30.0%
AGAGTTCTACTATGATATGT+GGG - chr1_3:34780378-34780397 Msa0115880:CDS 30.0%
AGAGACCTAAAAAAACACAA+GGG + chr1_3:34780581-34780600 None:intergenic 30.0%
TAGAGACCTAAAAAAACACA+AGG + chr1_3:34780582-34780601 None:intergenic 30.0%
!! AGTTGGAACCTTTAGAATTA+CGG - chr1_3:34780614-34780633 Msa0115880:CDS 30.0%
GGTCAAAATTACAACTAACA+AGG - chr1_3:34780874-34780893 Msa0115880:CDS 30.0%
GTGTATCAGCATATATCATA+AGG + chr1_3:34780943-34780962 None:intergenic 30.0%
GTATAATTACCGTTGAAGTT+AGG + chr1_3:34781253-34781272 None:intergenic 30.0%
CACAATCTTGAAACAATACT+GGG + chr1_3:34781420-34781439 None:intergenic 30.0%
TGGGTTAAATTGCAAAAAAC+AGG + chr1_3:34781450-34781469 None:intergenic 30.0%
!! TTCGATGCTTTAGAGATTAT+GGG - chr1_3:34781630-34781649 Msa0115880:CDS 30.0%
! GTGATGCACTAGATTTTTAA+TGG - chr1_3:34782282-34782301 Msa0115880:CDS 30.0%
! GATGCACTAGATTTTTAATG+GGG - chr1_3:34782284-34782303 Msa0115880:CDS 30.0%
TTACACTTAACTCACTTTAG+AGG + chr1_3:34782312-34782331 None:intergenic 30.0%
TTGGTTACAATAATTGCAAC+GGG + chr1_3:34782542-34782561 None:intergenic 30.0%
GTTGGTTACAATAATTGCAA+CGG + chr1_3:34782543-34782562 None:intergenic 30.0%
ACACAATCACAGTAAAATGT+TGG + chr1_3:34782561-34782580 None:intergenic 30.0%
! AACATTTTACTGTGATTGTG+TGG - chr1_3:34782560-34782579 Msa0115880:CDS 30.0%
GAACTTGGATGAATATATAC+AGG + chr1_3:34782799-34782818 None:intergenic 30.0%
ATCCAACATAAAATGTATCC+AGG + chr1_3:34783094-34783113 None:intergenic 30.0%
ACTACTGCTGATACTATAAT+TGG + chr1_3:34783296-34783315 None:intergenic 30.0%
TTCATTCATATATACCACCG+AGG - chr1_3:34776601-34776620 Msa0115880:three_prime_UTR 35.0%
AAAATAGAGTAAAACCTCGG+TGG + chr1_3:34776618-34776637 None:intergenic 35.0%
AGTTTCTTCAATCCATCTTG+TGG + chr1_3:34776689-34776708 None:intergenic 35.0%
!! ACAAGATGGATTGAAGAAAC+TGG - chr1_3:34776688-34776707 Msa0115880:three_prime_UTR 35.0%
ACTGAATTAGAATCTCACAC+CGG - chr1_3:34776740-34776759 Msa0115880:exon 35.0%
GACGCTATACTCAAAGAAAA+CGG - chr1_3:34776833-34776852 Msa0115880:CDS 35.0%
AGAGTTCGAACAAAGTAATC+CGG + chr1_3:34776869-34776888 None:intergenic 35.0%
! TTTAGGTTTAGGAGGAAGAA+TGG + chr1_3:34776909-34776928 None:intergenic 35.0%
CAAAGCCTTGAACTTAGTAT+TGG + chr1_3:34776969-34776988 None:intergenic 35.0%
CAATACTAAGTTCAAGGCTT+TGG - chr1_3:34776967-34776986 Msa0115880:CDS 35.0%
TGGTTACAGAGATAGAGATA+GGG - chr1_3:34777105-34777124 Msa0115880:CDS 35.0%
GAGATGAGTATGAAGATGAA+AGG - chr1_3:34777317-34777336 Msa0115880:intron 35.0%
! GTTCAGTTGGATGATTTTAG+AGG - chr1_3:34777469-34777488 Msa0115880:intron 35.0%
!! GTTGGATGATTTTAGAGGAA+AGG - chr1_3:34777474-34777493 Msa0115880:intron 35.0%
!! GATGATTTTAGAGGAAAGGA+GGG - chr1_3:34777478-34777497 Msa0115880:intron 35.0%
! TTTGGTTCATGTTTCTCAGA+TGG - chr1_3:34777501-34777520 Msa0115880:intron 35.0%
GAAGATTGCTAATGCTAAAG+AGG - chr1_3:34777531-34777550 Msa0115880:intron 35.0%
AGCACAACAATTGATTGCTT+CGG - chr1_3:34777831-34777850 Msa0115880:intron 35.0%
GGATTCTTGAAGATCTTAAC+AGG + chr1_3:34778012-34778031 None:intergenic 35.0%
AAGATCTTCAAGAATCCAGA+AGG - chr1_3:34778015-34778034 Msa0115880:intron 35.0%
!! CTTTGGAATTGAATCAAGCA+TGG + chr1_3:34778118-34778137 None:intergenic 35.0%
CATGCTTGATTCAATTCCAA+AGG - chr1_3:34778116-34778135 Msa0115880:intron 35.0%
!! AAACCATTACTTTTGGGCAA+AGG - chr1_3:34778262-34778281 Msa0115880:intron 35.0%
TGTCCATGATAATCAGGTAT+TGG - chr1_3:34778356-34778375 Msa0115880:intron 35.0%
CAACCAATACCTGATTATCA+TGG + chr1_3:34778362-34778381 None:intergenic 35.0%
!! AATCAGGTATTGGTTGTGAT+TGG - chr1_3:34778366-34778385 Msa0115880:intron 35.0%
! AGTACATCCAATTTTACCTC+TGG + chr1_3:34778454-34778473 None:intergenic 35.0%
ATGTACTTGATTACGGTATC+AGG + chr1_3:34778588-34778607 None:intergenic 35.0%
GTAATCAAGTACATGACTGA+TGG - chr1_3:34778594-34778613 Msa0115880:intron 35.0%
CCGTATAAATTGTTCTCTCA+TGG + chr1_3:34778689-34778708 None:intergenic 35.0%
! TTAGCATAAAGTATCTCCAC+AGG + chr1_3:34778855-34778874 None:intergenic 35.0%
GACATTCTTCTCTTCTTAAC+TGG - chr1_3:34778948-34778967 Msa0115880:intron 35.0%
AGATTGCATTTCACTAGGAA+GGG + chr1_3:34779072-34779091 None:intergenic 35.0%
TAGATTGCATTTCACTAGGA+AGG + chr1_3:34779073-34779092 None:intergenic 35.0%
TTCCTAGTGAAATGCAATCT+AGG - chr1_3:34779072-34779091 Msa0115880:intron 35.0%
ATCCTAGATTGCATTTCACT+AGG + chr1_3:34779077-34779096 None:intergenic 35.0%
AATGTTTATAACCCGAAGCA+AGG - chr1_3:34779212-34779231 Msa0115880:intron 35.0%
TGATATCGGAGTAATAACCA+AGG + chr1_3:34779246-34779265 None:intergenic 35.0%
! TCTATACTGAGAGTGCATAT+AGG - chr1_3:34779330-34779349 Msa0115880:intron 35.0%
TACTCTTAGCATGAAAGCTA+TGG - chr1_3:34779409-34779428 Msa0115880:intron 35.0%
ACTCTTAGCATGAAAGCTAT+GGG - chr1_3:34779410-34779429 Msa0115880:intron 35.0%
AACCAAATTGGGTAGGAAAA+TGG - chr1_3:34779544-34779563 Msa0115880:intron 35.0%
!!! CAATATTTTTTACAGGCCCA+GGG - chr1_3:34779670-34779689 Msa0115880:intron 35.0%
AAACAGCAAGTAGTGTAAGA+TGG + chr1_3:34779751-34779770 None:intergenic 35.0%
!! TACTTGCTGTTTATGAATCC+TGG - chr1_3:34779759-34779778 Msa0115880:intron 35.0%
ACAAAGTTCTCAAAACACCA+GGG + chr1_3:34779806-34779825 None:intergenic 35.0%
AACAAAGTTCTCAAAACACC+AGG + chr1_3:34779807-34779826 None:intergenic 35.0%
! AAGTTGTTTCCTAACATCCT+GGG + chr1_3:34779852-34779871 None:intergenic 35.0%
! CAAAGCAAGCAAATTTTCAG+AGG + chr1_3:34779921-34779940 None:intergenic 35.0%
! CTCTGAAAATTTGCTTGCTT+TGG - chr1_3:34779919-34779938 Msa0115880:intron 35.0%
TCCGAAGTATGGAAAATATG+TGG - chr1_3:34780012-34780031 Msa0115880:CDS 35.0%
! GCCACATATTTTCCATACTT+CGG + chr1_3:34780016-34780035 None:intergenic 35.0%
AGTATGGAAAATATGTGGCA+AGG - chr1_3:34780017-34780036 Msa0115880:CDS 35.0%
GTATGGAAAATATGTGGCAA+GGG - chr1_3:34780018-34780037 Msa0115880:CDS 35.0%
TATGGAAAATATGTGGCAAG+GGG - chr1_3:34780019-34780038 Msa0115880:CDS 35.0%
TCTCACCATTGAATGGAAAA+AGG - chr1_3:34780097-34780116 Msa0115880:CDS 35.0%
GTGAAAGGAAAAGCTTATGA+TGG - chr1_3:34780280-34780299 Msa0115880:CDS 35.0%
GGAAAAGCTTATGATGGTAA+AGG - chr1_3:34780286-34780305 Msa0115880:CDS 35.0%
GAGACCTAAAAAAACACAAG+GGG + chr1_3:34780580-34780599 None:intergenic 35.0%
!! CTCTAAAGTTTAGGTGTAGT+TGG - chr1_3:34780597-34780616 Msa0115880:CDS 35.0%
!! TACTTTGGGATTAAGACTCA+AGG + chr1_3:34780807-34780826 None:intergenic 35.0%
CCTGTACATGTATAAGACTA+GGG - chr1_3:34781031-34781050 Msa0115880:CDS 35.0%
CTGTACATGTATAAGACTAG+GGG - chr1_3:34781032-34781051 Msa0115880:CDS 35.0%
ACTTCAACGGTAATTATACC+TGG - chr1_3:34781254-34781273 Msa0115880:CDS 35.0%
CTTCAACGGTAATTATACCT+GGG - chr1_3:34781255-34781274 Msa0115880:CDS 35.0%
TTCAACGGTAATTATACCTG+GGG - chr1_3:34781256-34781275 Msa0115880:CDS 35.0%
AAACTTGAGAGATAGTCGTA+TGG - chr1_3:34781354-34781373 Msa0115880:CDS 35.0%
CCACAATCTTGAAACAATAC+TGG + chr1_3:34781421-34781440 None:intergenic 35.0%
CCAGTATTGTTTCAAGATTG+TGG - chr1_3:34781418-34781437 Msa0115880:CDS 35.0%
!! GTTCGATGCTTTAGAGATTA+TGG - chr1_3:34781629-34781648 Msa0115880:CDS 35.0%
TTGCTGTGACAAAAAGATCA+TGG - chr1_3:34782086-34782105 Msa0115880:CDS 35.0%
TGCTGTGACAAAAAGATCAT+GGG - chr1_3:34782087-34782106 Msa0115880:CDS 35.0%
GGAAATGCTATGCAAATACA+AGG + chr1_3:34782131-34782150 None:intergenic 35.0%
TGCTGTGACAAAAAGATCAT+GGG + chr1_3:34782087-34782106 None:intergenic 35.0%
TTGCTGTGACAAAAAGATCA+TGG + chr1_3:34782086-34782105 None:intergenic 35.0%
GTGTAACGTGAGAAAATCAA+AGG - chr1_3:34782326-34782345 Msa0115880:CDS 35.0%
!! ACTCACTTTAGAGTGTAAAG+TGG + chr1_3:34782433-34782452 None:intergenic 35.0%
! CTTGGGTATCGCTTATATAA+TGG + chr1_3:34782497-34782516 None:intergenic 35.0%
GAAAAAACTTCTCCAAGATC+AGG - chr1_3:34782692-34782711 Msa0115880:CDS 35.0%
!!! CTTTTTTCATGCAGCTAGAA+AGG - chr1_3:34782735-34782754 Msa0115880:CDS 35.0%
ATCCTACAAAGATGAGCAAA+CGG - chr1_3:34782956-34782975 Msa0115880:CDS 35.0%
TTACTCAAACGCCATGAATT+TGG + chr1_3:34783027-34783046 None:intergenic 35.0%
TCTCAGTTTCTCTTAAAGCA+AGG - chr1_3:34783067-34783086 Msa0115880:CDS 35.0%
! GTCCTGGATACATTTTATGT+TGG - chr1_3:34783089-34783108 Msa0115880:CDS 35.0%
AATCATAATGACTGTTCTGC+TGG - chr1_3:34783225-34783244 Msa0115880:CDS 35.0%
TTCACAATCCATTCTCTCAC+CGG - chr1_3:34776566-34776585 Msa0115880:three_prime_UTR 40.0%
TCCATCTTGTGGAATTTCAG+CGG + chr1_3:34776678-34776697 None:intergenic 40.0%
! CTTGAACTTAGTATTGGAGG+TGG + chr1_3:34776963-34776982 None:intergenic 40.0%
CACCTCCAATACTAAGTTCA+AGG - chr1_3:34776961-34776980 Msa0115880:CDS 40.0%
! AGCCTTGAACTTAGTATTGG+AGG + chr1_3:34776966-34776985 None:intergenic 40.0%
AAAACAGATGGAACCACCAA+TGG - chr1_3:34777060-34777079 Msa0115880:CDS 40.0%
TCATCTTCATACCTGTCCAT+TGG + chr1_3:34777079-34777098 None:intergenic 40.0%
GACAGGTATGAAGATGATGA+TGG - chr1_3:34777082-34777101 Msa0115880:CDS 40.0%
!! AGGTATGAAGATGATGATGG+TGG - chr1_3:34777085-34777104 Msa0115880:CDS 40.0%
GTGGTTACAGAGATAGAGAT+AGG - chr1_3:34777104-34777123 Msa0115880:CDS 40.0%
ACAGAGATAGACGCGATAAA+AGG - chr1_3:34777200-34777219 Msa0115880:intron 40.0%
CAGAGATAGACGCGATAAAA+GGG - chr1_3:34777201-34777220 Msa0115880:intron 40.0%
AGAGATAGACGCGATAAAAG+GGG - chr1_3:34777202-34777221 Msa0115880:intron 40.0%
ACAGAGATAGGCACGATAAA+AGG - chr1_3:34777242-34777261 Msa0115880:intron 40.0%
CAGAGATAGGCACGATAAAA+GGG - chr1_3:34777243-34777262 Msa0115880:intron 40.0%
AGAGATAGGCACGATAAAAG+GGG - chr1_3:34777244-34777263 Msa0115880:intron 40.0%
GATAAAAGGGGAGATGATAG+AGG - chr1_3:34777256-34777275 Msa0115880:intron 40.0%
GAAGATGAAAGGGAAGAGAA+TGG - chr1_3:34777328-34777347 Msa0115880:intron 40.0%
GTCGTAGAGAAAGAGATTCA+AGG - chr1_3:34777365-34777384 Msa0115880:intron 40.0%
!! AGGAAGAATTTCTAGGGTGA+TGG - chr1_3:34777432-34777451 Msa0115880:intron 40.0%
!! ATTTCTAGGGTGATGGATAC+TGG - chr1_3:34777439-34777458 Msa0115880:intron 40.0%
!! TTTCTAGGGTGATGGATACT+GGG - chr1_3:34777440-34777459 Msa0115880:intron 40.0%
!! TACTGGGTGTTTTGTTCAGT+TGG - chr1_3:34777456-34777475 Msa0115880:intron 40.0%
!! GGATGATTTTAGAGGAAAGG+AGG - chr1_3:34777477-34777496 Msa0115880:intron 40.0%
!! TTTTAGAGGAAAGGAGGGTT+TGG - chr1_3:34777483-34777502 Msa0115880:intron 40.0%
ATGTTTCTCAGATGGCTACT+AGG - chr1_3:34777509-34777528 Msa0115880:intron 40.0%
GGTTGTTAAAAGGGATCAAC+AGG - chr1_3:34777552-34777571 Msa0115880:intron 40.0%
GGATCAACAGGTTTATGTGA+AGG - chr1_3:34777564-34777583 Msa0115880:intron 40.0%
GTGAAGGTGATTTCTGTTTC+TGG - chr1_3:34777580-34777599 Msa0115880:intron 40.0%
! CAAGTTGAGTCTTTCCATGA+GGG - chr1_3:34777606-34777625 Msa0115880:intron 40.0%
ATGTTGATCAACATCCCTCA+TGG + chr1_3:34777623-34777642 None:intergenic 40.0%
AGGGATGTTGATCAACATAC+CGG - chr1_3:34777625-34777644 Msa0115880:intron 40.0%
GGAGAACTCATTCTCTTCAA+CGG + chr1_3:34777799-34777818 None:intergenic 40.0%
AATGAGTTCTCCTGAGAGAT+GGG - chr1_3:34777807-34777826 Msa0115880:intron 40.0%
GCACAACAATTGATTGCTTC+GGG - chr1_3:34777832-34777851 Msa0115880:intron 40.0%
CACAACAATTGATTGCTTCG+GGG - chr1_3:34777833-34777852 Msa0115880:intron 40.0%
ACAACAATTGATTGCTTCGG+GGG - chr1_3:34777834-34777853 Msa0115880:intron 40.0%
TCTTCCTCGTCATCATAAGT+CGG + chr1_3:34777880-34777899 None:intergenic 40.0%
! ACTTATGATGACGAGGAAGA+TGG - chr1_3:34777880-34777899 Msa0115880:intron 40.0%
GCTTGAGATTGAGATGAATG+AGG - chr1_3:34777936-34777955 Msa0115880:intron 40.0%
AAGAATCCAGAAGGTTCTCT+GGG - chr1_3:34778024-34778043 Msa0115880:intron 40.0%
AAAGGATCTCAATCGTCCTT+GGG - chr1_3:34778134-34778153 Msa0115880:intron 40.0%
CTTCCATTCTGGCATATCAT+AGG + chr1_3:34778226-34778245 None:intergenic 40.0%
TGATATGCCAGAATGGAAGA+AGG - chr1_3:34778227-34778246 Msa0115880:intron 40.0%
TGACCTTTGCCCAAAAGTAA+TGG + chr1_3:34778268-34778287 None:intergenic 40.0%
AAGGTCAAAGCTTTCTCTTC+AGG - chr1_3:34778281-34778300 Msa0115880:intron 40.0%
TTGGTTGTGATTGGTGAAAC+CGG - chr1_3:34778375-34778394 Msa0115880:intron 40.0%
ACACAGTATCTTGCTGAAGT+GGG - chr1_3:34778420-34778439 Msa0115880:intron 40.0%
TACACCACCAGAGGTAAAAT+TGG - chr1_3:34778444-34778463 Msa0115880:intron 40.0%
! ACATCCAATTTTACCTCTGG+TGG + chr1_3:34778451-34778470 None:intergenic 40.0%
AAGAGAGTTGCAGAAGAGTT+TGG - chr1_3:34778507-34778526 Msa0115880:intron 40.0%
AGAGAGTTGCAGAAGAGTTT+GGG - chr1_3:34778508-34778527 Msa0115880:intron 40.0%
GAAGAGTTTGGGTGTAGATT+AGG - chr1_3:34778519-34778538 Msa0115880:intron 40.0%
TGTAGATTAGGAGAGGAAGT+TGG - chr1_3:34778531-34778550 Msa0115880:intron 40.0%
! AGGAAGTTGGTTATGCCATT+CGG - chr1_3:34778544-34778563 Msa0115880:intron 40.0%
TGACTGATGGTATGCTTCTT+AGG - chr1_3:34778607-34778626 Msa0115880:intron 40.0%
GACTGATGGTATGCTTCTTA+GGG - chr1_3:34778608-34778627 Msa0115880:intron 40.0%
TGTAACATCTTCACCATTCC+TGG - chr1_3:34778819-34778838 Msa0115880:intron 40.0%
GTAACATCTTCACCATTCCT+GGG - chr1_3:34778820-34778839 Msa0115880:intron 40.0%
AAGAGAAGAATGTCTCCTTC+AGG + chr1_3:34778942-34778961 None:intergenic 40.0%
TCTCTTCTTAACTGGTCAAG+AGG - chr1_3:34778956-34778975 Msa0115880:intron 40.0%
TCTCTCCATGAGAGAATGAA+GGG - chr1_3:34778999-34779018 Msa0115880:intron 40.0%
CTAATCCCTTCATTCTCTCA+TGG + chr1_3:34779007-34779026 None:intergenic 40.0%
CATGAGAGAATGAAGGGATT+AGG - chr1_3:34779005-34779024 Msa0115880:intron 40.0%
CAGGTAAAATGATCAGCTCA+GGG + chr1_3:34779040-34779059 None:intergenic 40.0%
ACAGGTAAAATGATCAGCTC+AGG + chr1_3:34779041-34779060 None:intergenic 40.0%
AGGCTTCTTTGACTATCGAT+GGG - chr1_3:34779153-34779172 Msa0115880:intron 40.0%
! ACATTTTGCTTAGCAAACCC+CGG + chr1_3:34779197-34779216 None:intergenic 40.0%
AAGGAATCAAGACCTTGCTT+CGG + chr1_3:34779227-34779246 None:intergenic 40.0%
TAGAGACGATAACACTTTCC+AGG + chr1_3:34779314-34779333 None:intergenic 40.0%
!! AATCTCTGGAATTGCAGTAG+GGG + chr1_3:34779366-34779385 None:intergenic 40.0%
!! GAATCTCTGGAATTGCAGTA+GGG + chr1_3:34779367-34779386 None:intergenic 40.0%
!! TGAATCTCTGGAATTGCAGT+AGG + chr1_3:34779368-34779387 None:intergenic 40.0%
CTGCAATTCCAGAGATTCAA+AGG - chr1_3:34779369-34779388 Msa0115880:intron 40.0%
GAGGGTCTTCTAACCAAATT+GGG - chr1_3:34779533-34779552 Msa0115880:intron 40.0%
GTCTTCTAACCAAATTGGGT+AGG - chr1_3:34779537-34779556 Msa0115880:intron 40.0%
!! AGCCATTTTCCTACCCAATT+TGG + chr1_3:34779549-34779568 None:intergenic 40.0%
GAAAATGGCTGAATTTCCGA+TGG - chr1_3:34779559-34779578 Msa0115880:intron 40.0%
AAATCTCATCACTGCATCCA+AGG + chr1_3:34779622-34779641 None:intergenic 40.0%
AGTCTGGATCATGGCAATTA+TGG + chr1_3:34779648-34779667 None:intergenic 40.0%
ATAATTGCCATGATCCAGAC+TGG - chr1_3:34779647-34779666 Msa0115880:intron 40.0%
AATATTGCCAGTCTGGATCA+TGG + chr1_3:34779657-34779676 None:intergenic 40.0%
!!! GCAATATTTTTTACAGGCCC+AGG - chr1_3:34779669-34779688 Msa0115880:intron 40.0%
! GTAAAAACTTTTCTGGACCC+TGG - chr1_3:34779786-34779805 Msa0115880:intron 40.0%
! GAAGTTGTTTCCTAACATCC+TGG + chr1_3:34779853-34779872 None:intergenic 40.0%
GAAACAACTTCTCTCCATCA+TGG - chr1_3:34779862-34779881 Msa0115880:intron 40.0%
TCCAACAGAATTCCGAAGTA+TGG - chr1_3:34780001-34780020 Msa0115880:CDS 40.0%
TCCATACTTCGGAATTCTGT+TGG + chr1_3:34780005-34780024 None:intergenic 40.0%
ATGGAAAATATGTGGCAAGG+GGG - chr1_3:34780020-34780039 Msa0115880:CDS 40.0%
! TCTCGCCTTTTTCCATTCAA+TGG + chr1_3:34780105-34780124 None:intergenic 40.0%
TTGAATGGAAAAAGGCGAGA+TGG - chr1_3:34780105-34780124 Msa0115880:CDS 40.0%
TGAATGGAAAAAGGCGAGAT+GGG - chr1_3:34780106-34780125 Msa0115880:CDS 40.0%
AGGACTATAACTCCTTCACA+CGG + chr1_3:34780209-34780228 None:intergenic 40.0%
TGTGAAGGAGTTATAGTCCT+AGG - chr1_3:34780209-34780228 Msa0115880:CDS 40.0%
TGTGAAATTTGCCTCGTGAA+AGG - chr1_3:34780265-34780284 Msa0115880:CDS 40.0%
! CATAAGCTTTTCCTTTCACG+AGG + chr1_3:34780279-34780298 None:intergenic 40.0%
! AGTACTATACTGTGGTGGAA+TGG - chr1_3:34780326-34780345 Msa0115880:CDS 40.0%
!!! GAATGTTGGTCCTTTTTTCC+CGG - chr1_3:34780471-34780490 Msa0115880:CDS 40.0%
!!! AATGTTGGTCCTTTTTTCCC+GGG - chr1_3:34780472-34780491 Msa0115880:CDS 40.0%
!!! GTCTCCCCTTGTGTTTTTTT+AGG - chr1_3:34780573-34780592 Msa0115880:CDS 40.0%
CAGTGAGACCGTAATTCTAA+AGG + chr1_3:34780625-34780644 None:intergenic 40.0%
AACTCAAATAAGCTCCTCCA+AGG - chr1_3:34780914-34780933 Msa0115880:CDS 40.0%
ACTCAAATAAGCTCCTCCAA+GGG - chr1_3:34780915-34780934 Msa0115880:CDS 40.0%
CATATATCATAAGGTCCCCT+TGG + chr1_3:34780934-34780953 None:intergenic 40.0%
GCCTGTACATGTATAAGACT+AGG - chr1_3:34781030-34781049 Msa0115880:CDS 40.0%
!! CCCTAGTCTTATACATGTAC+AGG + chr1_3:34781034-34781053 None:intergenic 40.0%
CACACACTCTATTTCAGTGT+TGG + chr1_3:34781305-34781324 None:intergenic 40.0%
TAGTTGTTGGACAGCAGAAA+CGG + chr1_3:34781508-34781527 None:intergenic 40.0%
GAACACCAGTACCCAAAAAA+TGG + chr1_3:34781613-34781632 None:intergenic 40.0%
AAATTGGATATCGTGAGTGC+TGG - chr1_3:34782670-34782689 Msa0115880:CDS 40.0%
AAACTTCTCCAAGATCAGGA+AGG - chr1_3:34782696-34782715 Msa0115880:CDS 40.0%
! TACAGGCTGATTCTCAACAA+GGG + chr1_3:34782782-34782801 None:intergenic 40.0%
! ATACAGGCTGATTCTCAACA+AGG + chr1_3:34782783-34782802 None:intergenic 40.0%
TAGTTGTCATTACAAGCTCG+TGG + chr1_3:34782858-34782877 None:intergenic 40.0%
CGAGCTTGTAATGACAACTA+AGG - chr1_3:34782858-34782877 Msa0115880:CDS 40.0%
AACTAAGGAATATATGCGCG+AGG - chr1_3:34782873-34782892 Msa0115880:CDS 40.0%
TAACAGTCATAGACCCCAAA+TGG - chr1_3:34782896-34782915 Msa0115880:CDS 40.0%
CCAATTCAACAAGCCATTTG+GGG + chr1_3:34782912-34782931 None:intergenic 40.0%
GCCAATTCAACAAGCCATTT+GGG + chr1_3:34782913-34782932 None:intergenic 40.0%
AGCCAATTCAACAAGCCATT+TGG + chr1_3:34782914-34782933 None:intergenic 40.0%
!! TCTGCCACTTTGAAGAATCT+TGG + chr1_3:34782937-34782956 None:intergenic 40.0%
TTCCGTTTGCTCATCTTTGT+AGG + chr1_3:34782961-34782980 None:intergenic 40.0%
TCGTGGTATCTATCATAGAG+TGG + chr1_3:34783003-34783022 None:intergenic 40.0%
TTTCTCTTAAAGCAAGGTCC+TGG - chr1_3:34783073-34783092 Msa0115880:CDS 40.0%
GATCCACTTTGCAATTCCCA+CGG - chr1_3:34776505-34776524 Msa0115880:three_prime_UTR 45.0%
TATCCGTGGGAATTGCAAAG+TGG + chr1_3:34776511-34776530 None:intergenic 45.0%
! GAATTACTAAGAAAGCGCGG+CGG - chr1_3:34776533-34776552 Msa0115880:three_prime_UTR 45.0%
GAATGAATTAAAGGCGGTGC+CGG + chr1_3:34776588-34776607 None:intergenic 45.0%
ACCGCTGAAATTCCACAAGA+TGG - chr1_3:34776674-34776693 Msa0115880:three_prime_UTR 45.0%
GTCAGAGGAATGACCTAACT+CGG + chr1_3:34776798-34776817 None:intergenic 45.0%
GTTAGGTCATTCCTCTGACT+CGG - chr1_3:34776799-34776818 Msa0115880:CDS 45.0%
AGATGATAGAGATCGCGCTA+AGG - chr1_3:34776997-34777016 Msa0115880:CDS 45.0%
TCTTCATACCTGTCCATTGG+TGG + chr1_3:34777076-34777095 None:intergenic 45.0%
GAAGAGATAGACGCAGAGAT+AGG - chr1_3:34777131-34777150 Msa0115880:CDS 45.0%
GAGATAGACGCGATAAAAGG+GGG - chr1_3:34777203-34777222 Msa0115880:intron 45.0%
AGATAGACGCGATAAAAGGG+GGG - chr1_3:34777204-34777223 Msa0115880:intron 45.0%
GATAAAAGGGGGGATGATAG+AGG - chr1_3:34777214-34777233 Msa0115880:intron 45.0%
ATAGAGGCAGAGACAGAGAT+AGG - chr1_3:34777230-34777249 Msa0115880:intron 45.0%
ATAGAGGCAGAGACAGAGAT+AGG - chr1_3:34777230-34777249 Msa0115880:intron 45.0%
TAGAGGCAGAGACAGAGATA+GGG - chr1_3:34777231-34777250 Msa0115880:intron 45.0%
ATAGGGATCGATACGAGAGA+CGG - chr1_3:34777290-34777309 Msa0115880:intron 45.0%
GATGAAAGGGAAGAGAATGG+TGG - chr1_3:34777331-34777350 Msa0115880:intron 45.0%
! GAGAATGGTGGTGATGAGAA+AGG - chr1_3:34777343-34777362 Msa0115880:intron 45.0%
AGAGAAAGAGATTCAAGGCG+TGG - chr1_3:34777370-34777389 Msa0115880:intron 45.0%
AGGTGAGCCCGAATTGTATA+TGG - chr1_3:34777402-34777421 Msa0115880:intron 45.0%
CCTCATGGAAAGACTCAACT+TGG + chr1_3:34777608-34777627 None:intergenic 45.0%
! CCAAGTTGAGTCTTTCCATG+AGG - chr1_3:34777605-34777624 Msa0115880:intron 45.0%
GGGATGTTGATCAACATACC+GGG - chr1_3:34777626-34777645 Msa0115880:intron 45.0%
TGTTGATCAACATACCGGGA+AGG - chr1_3:34777630-34777649 Msa0115880:intron 45.0%
GAATGAGTTCTCCTGAGAGA+TGG - chr1_3:34777806-34777825 Msa0115880:intron 45.0%
!!! TTCGGGGGTTTTGAGTGTTT+CGG - chr1_3:34777849-34777868 Msa0115880:intron 45.0%
! GTATCCGACTTATGATGACG+AGG - chr1_3:34777873-34777892 Msa0115880:intron 45.0%
GGAGTGATGTACCAAGAAGA+AGG - chr1_3:34777901-34777920 Msa0115880:intron 45.0%
CAAGAATCCAGAAGGTTCTC+TGG - chr1_3:34778023-34778042 Msa0115880:intron 45.0%
CAAGGACGATTGAGATCCTT+TGG + chr1_3:34778135-34778154 None:intergenic 45.0%
CAAAGGATCTCAATCGTCCT+TGG - chr1_3:34778133-34778152 Msa0115880:intron 45.0%
TTTCACCTGACTCTGGCATA+GGG + chr1_3:34778164-34778183 None:intergenic 45.0%
CAGCCTATGATATGCCAGAA+TGG - chr1_3:34778220-34778239 Msa0115880:intron 45.0%
TATGCCAGAATGGAAGAAGG+AGG - chr1_3:34778230-34778249 Msa0115880:intron 45.0%
AATGGAAGAAGGAGGCCTAT+GGG - chr1_3:34778238-34778257 Msa0115880:intron 45.0%
AGCTTTCTCTTCAGGAACAG+AGG - chr1_3:34778289-34778308 Msa0115880:intron 45.0%
TCAGGCTGTCCATGATAATC+AGG - chr1_3:34778350-34778369 Msa0115880:intron 45.0%
TGTGATTGGTGAAACCGGTT+CGG - chr1_3:34778380-34778399 Msa0115880:intron 45.0%
CACACAGTATCTTGCTGAAG+TGG - chr1_3:34778419-34778438 Msa0115880:intron 45.0%
GTTTGGGTGTAGATTAGGAG+AGG - chr1_3:34778524-34778543 Msa0115880:intron 45.0%
! TGGTTATGCCATTCGGTTTG+AGG - chr1_3:34778551-34778570 Msa0115880:intron 45.0%
AGTGCAATCCTCAAACCGAA+TGG + chr1_3:34778562-34778581 None:intergenic 45.0%
! ATTCGGTTTGAGGATTGCAC+TGG - chr1_3:34778561-34778580 Msa0115880:intron 45.0%
GTGACAATCAATCGCAACTC+AGG + chr1_3:34778753-34778772 None:intergenic 45.0%
AGGAAAAGTTCTCCCAGGAA+TGG + chr1_3:34778835-34778854 None:intergenic 45.0%
ACAGCCAGAAAGCGATTACT+TGG - chr1_3:34778875-34778894 Msa0115880:intron 45.0%
GCATCCAAGTAATCGCTTTC+TGG + chr1_3:34778882-34778901 None:intergenic 45.0%
GTTCTGTCAAGTGGATCTGT+AGG + chr1_3:34778920-34778939 None:intergenic 45.0%
ATCCACTTGACAGAACCTGA+AGG - chr1_3:34778924-34778943 Msa0115880:intron 45.0%
TCATTCTCTCATGGAGAGAC+TGG + chr1_3:34778998-34779017 None:intergenic 45.0%
GTCTCTCCATGAGAGAATGA+AGG - chr1_3:34778998-34779017 Msa0115880:intron 45.0%
!! CTAGGAAGGGCACTATAAAC+AGG + chr1_3:34779059-34779078 None:intergenic 45.0%
ATATTTGATCCTGCTCCTCC+TGG - chr1_3:34779095-34779114 Msa0115880:intron 45.0%
TATTTGATCCTGCTCCTCCT+GGG - chr1_3:34779096-34779115 Msa0115880:intron 45.0%
! ACAACCACTTTCCTTTTCCC+AGG + chr1_3:34779116-34779135 None:intergenic 45.0%
TGGGAAAAGGAAAGTGGTTG+TGG - chr1_3:34779115-34779134 Msa0115880:intron 45.0%
TGTGGCTACAAACATTGCTG+AGG - chr1_3:34779133-34779152 Msa0115880:intron 45.0%
GAGGCTTCTTTGACTATCGA+TGG - chr1_3:34779152-34779171 Msa0115880:intron 45.0%
AGGAATCAAGACCTTGCTTC+GGG + chr1_3:34779226-34779245 None:intergenic 45.0%
GAAGCAAGGTCTTGATTCCT+TGG - chr1_3:34779226-34779245 Msa0115880:intron 45.0%
TTGGCAGACGCTTGTGATAT+CGG + chr1_3:34779260-34779279 None:intergenic 45.0%
GAAATTAGTGCTTGGGGTGA+TGG + chr1_3:34779473-34779492 None:intergenic 45.0%
! ATGGCGGAAATTAGTGCTTG+GGG + chr1_3:34779479-34779498 None:intergenic 45.0%
! CATGGCGGAAATTAGTGCTT+GGG + chr1_3:34779480-34779499 None:intergenic 45.0%
AAGACTGTAAAGCTGCTCCA+TGG + chr1_3:34779498-34779517 None:intergenic 45.0%
ATGGAGCAGCTTTACAGTCT+TGG - chr1_3:34779497-34779516 Msa0115880:intron 45.0%
GCTTTACAGTCTTGGAGCAT+TGG - chr1_3:34779505-34779524 Msa0115880:intron 45.0%
CGAGGGTCTTCTAACCAAAT+TGG - chr1_3:34779532-34779551 Msa0115880:intron 45.0%
AGCCTTCTTCTGATCTGCTT+GGG + chr1_3:34779705-34779724 None:intergenic 45.0%
TAGCCTTCTTCTGATCTGCT+TGG + chr1_3:34779706-34779725 None:intergenic 45.0%
AAGCAGATCAGAAGAAGGCT+AGG - chr1_3:34779705-34779724 Msa0115880:intron 45.0%
! GAAGAAGGCTAGGTTTTTCC+AGG - chr1_3:34779715-34779734 Msa0115880:intron 45.0%
CTTCGGAATTCTGTTGGACA+AGG + chr1_3:34779999-34780018 None:intergenic 45.0%
AAATATGTGGCAAGGGGGAA+TGG - chr1_3:34780025-34780044 Msa0115880:CDS 45.0%
ATAACTCCTTCACACGGGAA+TGG + chr1_3:34780203-34780222 None:intergenic 45.0%
GGACTATAACTCCTTCACAC+GGG + chr1_3:34780208-34780227 None:intergenic 45.0%
! ACAGTATAGTACTGAGGTGG+TGG + chr1_3:34780319-34780338 None:intergenic 45.0%
ACCACCTCAGTACTATACTG+TGG - chr1_3:34780318-34780337 Msa0115880:CDS 45.0%
! ACCACAGTATAGTACTGAGG+TGG + chr1_3:34780322-34780341 None:intergenic 45.0%
ACCTCAGTACTATACTGTGG+TGG - chr1_3:34780321-34780340 Msa0115880:CDS 45.0%
TCCACCACAGTATAGTACTG+AGG + chr1_3:34780325-34780344 None:intergenic 45.0%
!! TTCAGTTTCAGGTTGAGGCT+GGG + chr1_3:34780444-34780463 None:intergenic 45.0%
!! TTTCAGTTTCAGGTTGAGGC+TGG + chr1_3:34780445-34780464 None:intergenic 45.0%
AAAAGAAAAGGAGCGAGCAC+GGG + chr1_3:34780752-34780771 None:intergenic 45.0%
CAAAAGAAAAGGAGCGAGCA+CGG + chr1_3:34780753-34780772 None:intergenic 45.0%
CTCAAATAAGCTCCTCCAAG+GGG - chr1_3:34780916-34780935 Msa0115880:CDS 45.0%
ATATCATAAGGTCCCCTTGG+AGG + chr1_3:34780931-34780950 None:intergenic 45.0%
GGGTAGTGCAAGAGATACAA+AGG - chr1_3:34781052-34781071 Msa0115880:CDS 45.0%
AGTTTATTCAGGTACGCGAG+AGG + chr1_3:34781226-34781245 None:intergenic 45.0%
! CTCTATTTCAGTGTTGGACC+TGG + chr1_3:34781299-34781318 None:intergenic 45.0%
!! TCGCACCAGTTTTGATCTAC+CGG - chr1_3:34781385-34781404 Msa0115880:CDS 45.0%
ACGCAAGGGTGAAAACATGT+GGG + chr1_3:34781469-34781488 None:intergenic 45.0%
TACGCAAGGGTGAAAACATG+TGG + chr1_3:34781470-34781489 None:intergenic 45.0%
!! ACAGCAGAAACGGCTAGTTT+GGG + chr1_3:34781498-34781517 None:intergenic 45.0%
ACCCAAAAAATGGCAGAGTG+CGG + chr1_3:34781603-34781622 None:intergenic 45.0%
!!! CTCTGCCATTTTTTGGGTAC+TGG - chr1_3:34781605-34781624 Msa0115880:CDS 45.0%
ATGACTTCAGCCCTATGTCA+AGG - chr1_3:34782198-34782217 Msa0115880:CDS 45.0%
TGAAGTGGAGCCTTGACATA+GGG + chr1_3:34782211-34782230 None:intergenic 45.0%
AGTGATAGCCTTCCTGATCT+TGG + chr1_3:34782707-34782726 None:intergenic 45.0%
AAGGGTTCTGTAACCTTCCT+GGG + chr1_3:34782764-34782783 None:intergenic 45.0%
!! CTCTGGAACAAAGCTGAACT+TGG + chr1_3:34782814-34782833 None:intergenic 45.0%
!! CAAGTTCAGCTTTGTTCCAG+AGG - chr1_3:34782812-34782831 Msa0115880:CDS 45.0%
!! CCCCAAATGGCTTGTTGAAT+TGG - chr1_3:34782909-34782928 Msa0115880:CDS 45.0%
GGCTCCAAGATTCTTCAAAG+TGG - chr1_3:34782930-34782949 Msa0115880:CDS 45.0%
GATACCACGAGCCAAATTCA+TGG - chr1_3:34783013-34783032 Msa0115880:CDS 45.0%
!!! ATTTTTAAAAATAGATTTTT+TGG + chr1_3:34782036-34782055 None:intergenic 5.0%
!! TATATATATATATAATGAAA+TGG - chr1_3:34782459-34782478 Msa0115880:CDS 5.0%
!! ATATATATATATAATGAAAT+GGG - chr1_3:34782460-34782479 Msa0115880:CDS 5.0%
TTAGAATCTCACACCGGCAC+CGG - chr1_3:34776746-34776765 Msa0115880:exon 50.0%
GCTGAGTTCATCACCGAGTT+AGG - chr1_3:34776782-34776801 Msa0115880:CDS 50.0%
! AGAAAACGGTGCTGAGATGC+CGG - chr1_3:34776847-34776866 Msa0115880:CDS 50.0%
GTTTAGGAGGAAGAATGGCG+TGG + chr1_3:34776904-34776923 None:intergenic 50.0%
AGATGGAACCACCAATGGAC+AGG - chr1_3:34777065-34777084 Msa0115880:CDS 50.0%
GAAAGAGATTCAAGGCGTGG+TGG - chr1_3:34777373-34777392 Msa0115880:intron 50.0%
CAAGGGAAGAAGATCCTTCC+CGG + chr1_3:34777647-34777666 None:intergenic 50.0%
GGAAGGATCTTCTTCCCTTG+AGG - chr1_3:34777647-34777666 Msa0115880:intron 50.0%
TCTTCCCTTGAGGAAGAGCT+CGG - chr1_3:34777657-34777676 Msa0115880:intron 50.0%
TGGTTAGGACAGGGCTTTCT+GGG - chr1_3:34777731-34777750 Msa0115880:intron 50.0%
!! GCTTTCTGGGATCAGGATTG+TGG - chr1_3:34777744-34777763 Msa0115880:intron 50.0%
!! TTCTGGGATCAGGATTGTGG+AGG - chr1_3:34777747-34777766 Msa0115880:intron 50.0%
! ATGACACTGTTTCTTCGCGC+AGG - chr1_3:34777773-34777792 Msa0115880:intron 50.0%
TGTTGTGCTTCCCATCTCTC+AGG + chr1_3:34777820-34777839 None:intergenic 50.0%
!! GTACCAAGAAGAAGGTGCTG+AGG - chr1_3:34777909-34777928 Msa0115880:intron 50.0%
CTTCCTCAGCACCTTCTTCT+TGG + chr1_3:34777915-34777934 None:intergenic 50.0%
ATGAACCCGCCTTCTTGCAA+GGG - chr1_3:34777959-34777978 Msa0115880:intron 50.0%
AGGGCAGAGCAGATACTCAA+TGG - chr1_3:34777978-34777997 Msa0115880:intron 50.0%
GCTCCAGTCTGCGCTTATAA+AGG - chr1_3:34778059-34778078 Msa0115880:intron 50.0%
GCTCCTTTATAAGCGCAGAC+TGG + chr1_3:34778065-34778084 None:intergenic 50.0%
CTTTCACCTGACTCTGGCAT+AGG + chr1_3:34778165-34778184 None:intergenic 50.0%
CTATGCCAGAGTCAGGTGAA+AGG - chr1_3:34778163-34778182 Msa0115880:intron 50.0%
AGATGCCTTTCACCTGACTC+TGG + chr1_3:34778171-34778190 None:intergenic 50.0%
TAGGCCTCCTTCTTCCATTC+TGG + chr1_3:34778237-34778256 None:intergenic 50.0%
GAATGGAAGAAGGAGGCCTA+TGG - chr1_3:34778237-34778256 Msa0115880:intron 50.0%
! GTGATTGGTGAAACCGGTTC+GGG - chr1_3:34778381-34778400 Msa0115880:intron 50.0%
! CTGAGTAGTCTTACCCGAAC+CGG + chr1_3:34778397-34778416 None:intergenic 50.0%
TTGGATGTACTCAACCCCGT+CGG - chr1_3:34778463-34778482 Msa0115880:intron 50.0%
! TCCTGGGAGAACTTTTCCTG+TGG - chr1_3:34778836-34778855 Msa0115880:intron 50.0%
TCCACAGGAAAAGTTCTCCC+AGG + chr1_3:34778840-34778859 None:intergenic 50.0%
! CTCCTTCAGGTTCTGTCAAG+TGG + chr1_3:34778929-34778948 None:intergenic 50.0%
TCCTCCTGGGAAAAGGAAAG+TGG - chr1_3:34779109-34779128 Msa0115880:intron 50.0%
! ACCACTTTCCTTTTCCCAGG+AGG + chr1_3:34779113-34779132 None:intergenic 50.0%
CGTCTGCCAAACAAAGAGCT+GGG - chr1_3:34779270-34779289 Msa0115880:intron 50.0%
! ATTAGTGCTTGGGGTGATGG+TGG + chr1_3:34779470-34779489 None:intergenic 50.0%
! CCATGGCGGAAATTAGTGCT+TGG + chr1_3:34779481-34779500 None:intergenic 50.0%
CCAAGCACTAATTTCCGCCA+TGG - chr1_3:34779478-34779497 Msa0115880:intron 50.0%
ACTGTAAAGCTGCTCCATGG+CGG + chr1_3:34779495-34779514 None:intergenic 50.0%
!! TCTTGGAGCATTGGATGACG+AGG - chr1_3:34779514-34779533 Msa0115880:intron 50.0%
!! CTTGGAGCATTGGATGACGA+GGG - chr1_3:34779515-34779534 Msa0115880:intron 50.0%
!! TTGGACAGTGGTGGATCCAT+CGG + chr1_3:34779578-34779597 None:intergenic 50.0%
TACACTGGCAAGCAGCATCT+TGG + chr1_3:34779597-34779616 None:intergenic 50.0%
ACTGCATCCAAGGTCTACAC+TGG + chr1_3:34779612-34779631 None:intergenic 50.0%
AGCCCAAGCAGATCAGAAGA+AGG - chr1_3:34779700-34779719 Msa0115880:intron 50.0%
! GCTAGGTTTTTCCAGGCAGA+GGG - chr1_3:34779722-34779741 Msa0115880:intron 50.0%
TGAGAAGAGCCCAGGATGTT+AGG - chr1_3:34779840-34779859 Msa0115880:intron 50.0%
GAGAATCCATTCCCGTGTGA+AGG - chr1_3:34780194-34780213 Msa0115880:CDS 50.0%
TTCCTGAATAACCCTCTGCC+CGG + chr1_3:34780493-34780512 None:intergenic 50.0%
! CGTGCTCGCTCCTTTTCTTT+TGG - chr1_3:34780751-34780770 Msa0115880:CDS 50.0%
TCAGGTACGCGAGAGGAAAA+GGG + chr1_3:34781219-34781238 None:intergenic 50.0%
TTCAGGTACGCGAGAGGAAA+AGG + chr1_3:34781220-34781239 None:intergenic 50.0%
! GTTTTACGCTCAGCTGTACC+AGG - chr1_3:34781278-34781297 Msa0115880:CDS 50.0%
AGTGTGTGTGTTCGTACCGA+AGG - chr1_3:34781317-34781336 Msa0115880:CDS 50.0%
!! CACCAGTTTTGATCTACCGG+AGG - chr1_3:34781388-34781407 Msa0115880:CDS 50.0%
CTCCTCCGGTAGATCAAAAC+TGG + chr1_3:34781393-34781412 None:intergenic 50.0%
CAATACTGGGTTCTCTCCTC+CGG + chr1_3:34781407-34781426 None:intergenic 50.0%
!! CAGCAGAAACGGCTAGTTTG+GGG + chr1_3:34781497-34781516 None:intergenic 50.0%
! GACAGCAGAAACGGCTAGTT+TGG + chr1_3:34781499-34781518 None:intergenic 50.0%
TACGTGCAGGGTGCAACTTA+TGG + chr1_3:34781557-34781576 None:intergenic 50.0%
!!! ACCCGCACTCTGCCATTTTT+TGG - chr1_3:34781598-34781617 Msa0115880:CDS 50.0%
CCCAAAAAATGGCAGAGTGC+GGG + chr1_3:34781602-34781621 None:intergenic 50.0%
!!! CCCGCACTCTGCCATTTTTT+GGG - chr1_3:34781599-34781618 Msa0115880:CDS 50.0%
CTGAAGTGGAGCCTTGACAT+AGG + chr1_3:34782212-34782231 None:intergenic 50.0%
ATCAGGAAGGCTATCACTGC+AGG - chr1_3:34782709-34782728 Msa0115880:CDS 50.0%
TCAGGAAGGCTATCACTGCA+GGG - chr1_3:34782710-34782729 Msa0115880:CDS 50.0%
AGGGTTCTGTAACCTTCCTG+GGG + chr1_3:34782763-34782782 None:intergenic 50.0%
CAAGGGTTCTGTAACCTTCC+TGG + chr1_3:34782765-34782784 None:intergenic 50.0%
TCGTGGTATATGACCCAGTC+TGG + chr1_3:34782841-34782860 None:intergenic 50.0%
! AACGCCATGAATTTGGCTCG+TGG + chr1_3:34783020-34783039 None:intergenic 50.0%
TGACTGTTCTGCTGGAGATC+AGG - chr1_3:34783233-34783252 Msa0115880:CDS 50.0%
!! TCATTCCTCTGACTCGGTCG+AGG - chr1_3:34776805-34776824 Msa0115880:CDS 55.0%
GAATTCCTCGACCGAGTCAG+AGG + chr1_3:34776813-34776832 None:intergenic 55.0%
AGAGATTCAAGGCGTGGTGG+TGG - chr1_3:34777376-34777395 Msa0115880:intron 55.0%
TCCTCCGAGCTCTTCCTCAA+GGG + chr1_3:34777664-34777683 None:intergenic 55.0%
CGGAGGAGGAGGATTCGTTT+CGG - chr1_3:34777677-34777696 Msa0115880:intron 55.0%
TTCGTTTCGGACGAATCCGC+AGG - chr1_3:34777690-34777709 Msa0115880:intron 55.0%
AATCCGCAGGACTCGAAGGA+TGG - chr1_3:34777703-34777722 Msa0115880:intron 55.0%
ATCCGCAGGACTCGAAGGAT+GGG - chr1_3:34777704-34777723 Msa0115880:intron 55.0%
ATGGGCCAGTGGTTAGGACA+GGG - chr1_3:34777722-34777741 Msa0115880:intron 55.0%
GAAAGCCCTGTCCTAACCAC+TGG + chr1_3:34777730-34777749 None:intergenic 55.0%
GTGGTTAGGACAGGGCTTTC+TGG - chr1_3:34777730-34777749 Msa0115880:intron 55.0%
TGGGATCAGGATTGTGGAGG+AGG - chr1_3:34777750-34777769 Msa0115880:intron 55.0%
GATGAACCCGCCTTCTTGCA+AGG - chr1_3:34777958-34777977 Msa0115880:intron 55.0%
TCTGCTCTGCCCTTGCAAGA+AGG + chr1_3:34777971-34777990 None:intergenic 55.0%
TCTGGCATAGGGTCTTCCCA+AGG + chr1_3:34778153-34778172 None:intergenic 55.0%
GAAGACCCTATGCCAGAGTC+AGG - chr1_3:34778156-34778175 Msa0115880:intron 55.0%
!! AGGTGAAAGGCATCTTGCCC+AGG - chr1_3:34778176-34778195 Msa0115880:intron 55.0%
GCATCTTGCCCAGGAGTTGA+GGG - chr1_3:34778185-34778204 Msa0115880:intron 55.0%
CATCTTGCCCAGGAGTTGAG+GGG - chr1_3:34778186-34778205 Msa0115880:intron 55.0%
! CGGTTCGGGTAAGACTACTC+AGG - chr1_3:34778395-34778414 Msa0115880:intron 55.0%
!! GAAGTGGGTTACACCACCAG+AGG - chr1_3:34778435-34778454 Msa0115880:intron 55.0%
TGGATGTACTCAACCCCGTC+GGG - chr1_3:34778464-34778483 Msa0115880:intron 55.0%
TTTCGGACTGCTGAAGCAGC+TGG - chr1_3:34778716-34778735 Msa0115880:intron 55.0%
ATCCTGCTCCTCCTGGGAAA+AGG - chr1_3:34779102-34779121 Msa0115880:intron 55.0%
! TTCCTTTTCCCAGGAGGAGC+AGG + chr1_3:34779107-34779126 None:intergenic 55.0%
GCGTCTGCCAAACAAAGAGC+TGG - chr1_3:34779269-34779288 Msa0115880:intron 55.0%
TGCACGCCCAGCTCTTTGTT+TGG + chr1_3:34779279-34779298 None:intergenic 55.0%
AAACAAAGAGCTGGGCGTGC+AGG - chr1_3:34779278-34779297 Msa0115880:intron 55.0%
AACAAAGAGCTGGGCGTGCA+GGG - chr1_3:34779279-34779298 Msa0115880:intron 55.0%
AGCAGCATCTTGGACAGTGG+TGG + chr1_3:34779587-34779606 None:intergenic 55.0%
GCAAGCAGCATCTTGGACAG+TGG + chr1_3:34779590-34779609 None:intergenic 55.0%
CTGCTTGCCAGTGTAGACCT+TGG - chr1_3:34779602-34779621 Msa0115880:intron 55.0%
! GCTTGGGCTTGTTTCTCCCT+GGG + chr1_3:34779689-34779708 None:intergenic 55.0%
! TGCTTGGGCTTGTTTCTCCC+TGG + chr1_3:34779690-34779709 None:intergenic 55.0%
! GGCTAGGTTTTTCCAGGCAG+AGG - chr1_3:34779721-34779740 Msa0115880:intron 55.0%
TAAGATGGTCACCCTCTGCC+TGG + chr1_3:34779736-34779755 None:intergenic 55.0%
TCGATCGTTGAGAAGAGCCC+AGG - chr1_3:34779832-34779851 Msa0115880:intron 55.0%
!!! GTCCTTTTTTCCCGGGCAGA+GGG - chr1_3:34780479-34780498 Msa0115880:CDS 55.0%
AACCCTCTGCCCGGGAAAAA+AGG + chr1_3:34780484-34780503 None:intergenic 55.0%
TCCTGAATAACCCTCTGCCC+GGG + chr1_3:34780492-34780511 None:intergenic 55.0%
ACAGCTGAGCGTAAAACCCC+AGG + chr1_3:34781275-34781294 None:intergenic 55.0%
!! AGAAACGGCTAGTTTGGGGC+GGG + chr1_3:34781493-34781512 None:intergenic 55.0%
!! CAGAAACGGCTAGTTTGGGG+CGG + chr1_3:34781494-34781513 None:intergenic 55.0%
GGGTTCTGTAACCTTCCTGG+GGG + chr1_3:34782762-34782781 None:intergenic 55.0%
! AAGAAAGCGCGGCGGTACAG+AGG - chr1_3:34776541-34776560 Msa0115880:three_prime_UTR 60.0%
! AGAAAGCGCGGCGGTACAGA+GGG - chr1_3:34776542-34776561 Msa0115880:three_prime_UTR 60.0%
CTCAGCGAGAACCTTGTCGC+CGG + chr1_3:34776768-34776787 None:intergenic 60.0%
GGGATCGATACGAGAGACGG+AGG - chr1_3:34777293-34777312 Msa0115880:intron 60.0%
!! TCAAGGCGTGGTGGTGGTTC+AGG - chr1_3:34777382-34777401 Msa0115880:intron 60.0%
TCCCTTGAGGAAGAGCTCGG+AGG - chr1_3:34777660-34777679 Msa0115880:intron 60.0%
CTCCTCCGAGCTCTTCCTCA+AGG + chr1_3:34777665-34777684 None:intergenic 60.0%
CTTGAGGAAGAGCTCGGAGG+AGG - chr1_3:34777663-34777682 Msa0115880:intron 60.0%
GACGAATCCGCAGGACTCGA+AGG - chr1_3:34777699-34777718 Msa0115880:intron 60.0%
CGAAGGATGGGCCAGTGGTT+AGG - chr1_3:34777716-34777735 Msa0115880:intron 60.0%
GATGGGCCAGTGGTTAGGAC+AGG - chr1_3:34777721-34777740 Msa0115880:intron 60.0%
!! GGACAGGGCTTTCTGGGATC+AGG - chr1_3:34777737-34777756 Msa0115880:intron 60.0%
CTCTGCCCTTGCAAGAAGGC+GGG + chr1_3:34777967-34777986 None:intergenic 60.0%
GCTCTGCCCTTGCAAGAAGG+CGG + chr1_3:34777968-34777987 None:intergenic 60.0%
GCACGACCCAGAGAACCTTC+TGG + chr1_3:34778033-34778052 None:intergenic 60.0%
GGCATCTTGCCCAGGAGTTG+AGG - chr1_3:34778184-34778203 Msa0115880:intron 60.0%
GCCAACACCCCTCAACTCCT+GGG + chr1_3:34778196-34778215 None:intergenic 60.0%
AGCCAACACCCCTCAACTCC+TGG + chr1_3:34778197-34778216 None:intergenic 60.0%
ATGTACTCAACCCCGTCGGG+TGG - chr1_3:34778467-34778486 Msa0115880:intron 60.0%
TGACATTGCAGCCACCCGAC+GGG + chr1_3:34778481-34778500 None:intergenic 60.0%
CTGACATTGCAGCCACCCGA+CGG + chr1_3:34778482-34778501 None:intergenic 60.0%
!!! GGTCCTTTTTTCCCGGGCAG+AGG - chr1_3:34780478-34780497 Msa0115880:CDS 60.0%
TCCCGGGCAGAGGGTTATTC+AGG - chr1_3:34780488-34780507 Msa0115880:CDS 60.0%
! AGTTTGGGGCGGGTACGCAA+GGG + chr1_3:34781483-34781502 None:intergenic 60.0%
! TAGTTTGGGGCGGGTACGCA+AGG + chr1_3:34781484-34781503 None:intergenic 60.0%
GGTACATACCAGGTGCGGCA+CGG + chr1_3:34781581-34781600 None:intergenic 60.0%
GTGCGGGTACATACCAGGTG+CGG + chr1_3:34781586-34781605 None:intergenic 60.0%
GCAGAGTGCGGGTACATACC+AGG + chr1_3:34781591-34781610 None:intergenic 60.0%
TGCAGCTAGAAAGGACCCCC+AGG - chr1_3:34782744-34782763 Msa0115880:CDS 60.0%
GCTAGAAAGGACCCCCAGGA+AGG - chr1_3:34782748-34782767 Msa0115880:CDS 60.0%
TGTTCCAGAGGCAGCCAGAC+TGG - chr1_3:34782824-34782843 Msa0115880:CDS 60.0%
GTTCCAGAGGCAGCCAGACT+GGG - chr1_3:34782825-34782844 Msa0115880:CDS 60.0%
!! AGGCGGTGCCGGTGAGAGAA+TGG + chr1_3:34776577-34776596 None:intergenic 65.0%
GAGAACCTTGTCGCCGGTGC+CGG + chr1_3:34776762-34776781 None:intergenic 65.0%
GAGGAAGAGCTCGGAGGAGG+AGG - chr1_3:34777666-34777685 Msa0115880:intron 65.0%
GGCCCATCCTTCGAGTCCTG+CGG + chr1_3:34777709-34777728 None:intergenic 65.0%
GGACTCGAAGGATGGGCCAG+TGG - chr1_3:34777711-34777730 Msa0115880:intron 65.0%
! GCCCAGGAGTTGAGGGGTGT+TGG - chr1_3:34778192-34778211 Msa0115880:intron 65.0%
GACATTGCAGCCACCCGACG+GGG + chr1_3:34778480-34778499 None:intergenic 65.0%
GTGCGGCACGGATACGTGCA+GGG + chr1_3:34781569-34781588 None:intergenic 65.0%
TGACCCAGTCTGGCTGCCTC+TGG + chr1_3:34782831-34782850 None:intergenic 65.0%
!! TCACACCGGCACCGGCGACA+AGG - chr1_3:34776754-34776773 Msa0115880:exon 70.0%
CGTGCAGGGCGTACTGGACC+TGG - chr1_3:34779293-34779312 Msa0115880:intron 70.0%
GGTGCGGCACGGATACGTGC+AGG + chr1_3:34781570-34781589 None:intergenic 70.0%
GCACGTATCCGTGCCGCACC+TGG - chr1_3:34781570-34781589 Msa0115880:CDS 70.0%
GCTGGGCGTGCAGGGCGTAC+TGG - chr1_3:34779287-34779306 Msa0115880:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34776467 34783349 34776467 ID=Msa0115880;Name=Msa0115880
chr1_3 mRNA 34776467 34783349 34776467 ID=Msa0115880-mRNA-1;Parent=Msa0115880;Name=Msa0115880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|1|1|1|1|2|290|1271
chr1_3 exon 34776467 34777150 34776467 ID=Msa0115880-mRNA-1:exon:11022;Parent=Msa0115880-mRNA-1
chr1_3 exon 34779928 34783349 34779928 ID=Msa0115880-mRNA-1:exon:11021;Parent=Msa0115880-mRNA-1
chr1_3 CDS 34779928 34783349 34779928 ID=Msa0115880-mRNA-1:cds;Parent=Msa0115880-mRNA-1
chr1_3 CDS 34776757 34777150 34776757 ID=Msa0115880-mRNA-1:cds;Parent=Msa0115880-mRNA-1
chr1_3 three_prime_UTR 34776467 34776756 34776467 ID=Msa0115880-mRNA-1:three_prime_utr;Parent=Msa0115880-mRNA-1
Gene Sequence

>Msa0115880

CCGAAACTCATACAAAATCTAAAAATCAAAATAGGTTTGATCCACTTTGCAATTCCCACGGATAAAGAATTACTAAGAAAGCGCGGCGGTACAGAGGGCTTCACAATCCATTCTCTCACCGGCACCGCCTTTAATTCATTCATATATACCACCGAGGTTTTACTCTATTTTTCCCCAAATTTTTTGTTGTTGCTTTGTTCAATGGCTACCGCTGAAATTCCACAAGATGGATTGAAGAAACTGGAGTATCTTTCACTTGTATCTAAGGTATGCACTGAATTAGAATCTCACACCGGCACCGGCGACAAGGTTCTCGCTGAGTTCATCACCGAGTTAGGTCATTCCTCTGACTCGGTCGAGGAATTCGACGCTATACTCAAAGAAAACGGTGCTGAGATGCCGGATTACTTTGTTCGAACTCTTCTCACTATTATCCACGCCATTCTTCCTCCTAAACCTAAAAAAGAGAAAGAGAATCAGAACGTGAAGAGTTCCACCTCCAATACTAAGTTCAAGGCTTTGGCAATTTCAGATGATAGAGATCGCGCTAAGGAACTTCGTGAAGAGATCGAAATCGAAGCTAGAGAAAAACAAAAACAGATGGAACCACCAATGGACAGGTATGAAGATGATGATGGTGGTTACAGAGATAGAGATAGGGATAGAAGAGATAGACGCAGAGATAGGTATGAAGAAGATGATAAAAGAGATTATAGAAGAGGAAATGATAGAGACAGAGATAGACGCGATAAAAGGGGGGATGATAGAGGCAGAGACAGAGATAGGCACGATAAAAGGGGAGATGATAGAGGCAGAGACAGAGATAGGGATCGATACGAGAGACGGAGGAGAGATGAGTATGAAGATGAAAGGGAAGAGAATGGTGGTGATGAGAAAGGTCGTAGAGAAAGAGATTCAAGGCGTGGTGGTGGTTCAGGTGAGCCCGAATTGTATATGGTTTATAAAGGAAGAATTTCTAGGGTGATGGATACTGGGTGTTTTGTTCAGTTGGATGATTTTAGAGGAAAGGAGGGTTTGGTTCATGTTTCTCAGATGGCTACTAGGAAGATTGCTAATGCTAAAGAGGTTGTTAAAAGGGATCAACAGGTTTATGTGAAGGTGATTTCTGTTTCTGGTTCCAAGTTGAGTCTTTCCATGAGGGATGTTGATCAACATACCGGGAAGGATCTTCTTCCCTTGAGGAAGAGCTCGGAGGAGGAGGATTCGTTTCGGACGAATCCGCAGGACTCGAAGGATGGGCCAGTGGTTAGGACAGGGCTTTCTGGGATCAGGATTGTGGAGGAGGATGACACTGTTTCTTCGCGCAGGCCGTTGAAGAGAATGAGTTCTCCTGAGAGATGGGAAGCACAACAATTGATTGCTTCGGGGGTTTTGAGTGTTTCGGAGTATCCGACTTATGATGACGAGGAAGATGGAGTGATGTACCAAGAAGAAGGTGCTGAGGAAGAGCTTGAGATTGAGATGAATGAGGATGAACCCGCCTTCTTGCAAGGGCAGAGCAGATACTCAATGGATATGTCTCCTGTTAAGATCTTCAAGAATCCAGAAGGTTCTCTGGGTCGTGCTGCTGCGCTCCAGTCTGCGCTTATAAAGGAGCGAAGAGAAGTAAGAGAACAGCAGCAACGTACCATGCTTGATTCAATTCCAAAGGATCTCAATCGTCCTTGGGAAGACCCTATGCCAGAGTCAGGTGAAAGGCATCTTGCCCAGGAGTTGAGGGGTGTTGGCTTATCAGCCTATGATATGCCAGAATGGAAGAAGGAGGCCTATGGGAAAACCATTACTTTTGGGCAAAGGTCAAAGCTTTCTCTTCAGGAACAGAGGCAGAGTTTGCCAATTTACAAGCTAAAAAAAGAATTGGTTCAGGCTGTCCATGATAATCAGGTATTGGTTGTGATTGGTGAAACCGGTTCGGGTAAGACTACTCAGGTCACACAGTATCTTGCTGAAGTGGGTTACACCACCAGAGGTAAAATTGGATGTACTCAACCCCGTCGGGTGGCTGCAATGTCAGTTGCAAAGAGAGTTGCAGAAGAGTTTGGGTGTAGATTAGGAGAGGAAGTTGGTTATGCCATTCGGTTTGAGGATTGCACTGGACCTGATACCGTAATCAAGTACATGACTGATGGTATGCTTCTTAGGGAAATATTGGTTGATGAGAATCTGTCACAGTATTCTGTTATAATGCTTGATGAAGCCCATGAGAGAACAATTTATACGGATGTTCTTTTCGGACTGCTGAAGCAGCTGGTGAAGCGTAGACCTGAGTTGCGATTGATTGTCACGTCTGCTACTCTTGATGCTGAAAAATTTTCAGGATATTTCTTTAACTGTAACATCTTCACCATTCCTGGGAGAACTTTTCCTGTGGAGATACTTTATGCTAAACAGCCAGAAAGCGATTACTTGGATGCATCTTTGATCACTGTCCTACAGATCCACTTGACAGAACCTGAAGGAGACATTCTTCTCTTCTTAACTGGTCAAGAGGAGATTGATTTTGCTTGCCAGTCTCTCCATGAGAGAATGAAGGGATTAGGTAAGAATGTCCCTGAGCTGATCATTTTACCTGTTTATAGTGCCCTTCCTAGTGAAATGCAATCTAGGATATTTGATCCTGCTCCTCCTGGGAAAAGGAAAGTGGTTGTGGCTACAAACATTGCTGAGGCTTCTTTGACTATCGATGGGATATTTTATGTTATTGATCCGGGGTTTGCTAAGCAAAATGTTTATAACCCGAAGCAAGGTCTTGATTCCTTGGTTATTACTCCGATATCACAAGCGTCTGCCAAACAAAGAGCTGGGCGTGCAGGGCGTACTGGACCTGGAAAGTGTTATCGTCTCTATACTGAGAGTGCATATAGGAATGAGATGTCCCCTACTGCAATTCCAGAGATTCAAAGGATAAATCTGGGCATGACTACTCTTAGCATGAAAGCTATGGGCATAAATGATCTTCTGTCATTTGATTTTTTGGATCCACCATCACCCCAAGCACTAATTTCCGCCATGGAGCAGCTTTACAGTCTTGGAGCATTGGATGACGAGGGTCTTCTAACCAAATTGGGTAGGAAAATGGCTGAATTTCCGATGGATCCACCACTGTCCAAGATGCTGCTTGCCAGTGTAGACCTTGGATGCAGTGATGAGATTTTGACCATAATTGCCATGATCCAGACTGGCAATATTTTTTACAGGCCCAGGGAGAAACAAGCCCAAGCAGATCAGAAGAAGGCTAGGTTTTTCCAGGCAGAGGGTGACCATCTTACACTACTTGCTGTTTATGAATCCTGGAAAAGTAAAAACTTTTCTGGACCCTGGTGTTTTGAGAACTTTGTTCAATCTCGATCGTTGAGAAGAGCCCAGGATGTTAGGAAACAACTTCTCTCCATCATGGATAAGTACAAATTGGATATCGTGAGTGCTGGAAAAAACTTCTCCAAGATCAGGAAGGCTATCACTGCAGGGTTCTTTTTTCATGCAGCTAGAAAGGACCCCCAGGAAGGTTACAGAACCCTTGTTGAGAATCAGCCTGTATATATTCATCCAAGTTCAGCTTTGTTCCAGAGGCAGCCAGACTGGGTCATATACCACGAGCTTGTAATGACAACTAAGGAATATATGCGCGAGGTAACAGTCATAGACCCCAAATGGCTTGTTGAATTGGCTCCAAGATTCTTCAAAGTGGCAGATCCTACAAAGATGAGCAAACGGAAGCGTCAAGAACGTGTTGAACCACTCTATGATAGATACCACGAGCCAAATTCATGGCGTTTGAGTAAACGTCGTGCGTGA
Protein sequence

>Msa0115880

PKLIQNLKIKIGLIHFAIPTDKELLRKRGGTEGFTIHSLTGTAFNSFIYTTEVLLYFSPNFLLLLCSMATAEIPQDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGHSSDSVEEFDAILKENGAEMPDYFVRTLLTIIHAILPPKPKKEKENQNVKSSTSNTKFKALAISDDRDRAKELREEIEIEAREKQKQMEPPMDRYEDDDGGYRDRDRDRRDRRRDRYEEDDKRDYRRGNDRDRDRRDKRGDDRGRDRDRHDKRGDDRGRDRDRDRYERRRRDEYEDEREENGGDEKGRRERDSRRGGGSGEPELYMVYKGRISRVMDTGCFVQLDDFRGKEGLVHVSQMATRKIANAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLRKSSEEEDSFRTNPQDSKDGPVVRTGLSGIRIVEEDDTVSSRRPLKRMSSPERWEAQQLIASGVLSVSEYPTYDDEEDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKEAYGKTITFGQRSKLSLQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEVGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIYTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYAKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLHERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTAIPEIQRINLGMTTLSMKAMGINDLLSFDFLDPPSPQALISAMEQLYSLGALDDEGLLTKLGRKMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKKARFFQAEGDHLTLLAVYESWKSKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDIVSAGKNFSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERVEPLYDRYHEPNSWRLSKRRA*