Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0110520 | KEH44262.1 | 90.975 | 277 | 7 | 1 | 10 | 268 | 58 | 334 | 1.48e-173 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0110520 | sp|F4J3R7|SPD1_ARATH | 69.930 | 286 | 55 | 3 | 12 | 268 | 62 | 345 | 4.95e-128 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0110520 | A0A072VR46 | 90.975 | 277 | 7 | 1 | 10 | 268 | 58 | 334 | 7.07e-174 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0110520 | 0.827422 | 1.578209e-54 | -8.615850e-47 |
| Msa0007230 | Msa0110520 | 0.844946 | 5.515028e-59 | -8.615850e-47 |
| Msa0026120 | Msa0110520 | 0.803246 | 3.819489e-49 | -8.615850e-47 |
| Msa0030000 | Msa0110520 | 0.806762 | 7.027009e-50 | -8.615850e-47 |
| Msa0030030 | Msa0110520 | 0.836243 | 1.048694e-56 | -8.615850e-47 |
| Msa0032040 | Msa0110520 | 0.801359 | 9.345053e-49 | -8.615850e-47 |
| Msa0039200 | Msa0110520 | 0.855676 | 5.376065e-62 | -8.615850e-47 |
| Msa0040190 | Msa0110520 | 0.800233 | 1.586472e-48 | -8.615850e-47 |
| Msa0046670 | Msa0110520 | 0.826794 | 2.230626e-54 | -8.615850e-47 |
| Msa0051100 | Msa0110520 | 0.803244 | 3.823123e-49 | -8.615850e-47 |
| Msa0053480 | Msa0110520 | 0.845537 | 3.818961e-59 | -8.615850e-47 |
| Msa0055280 | Msa0110520 | 0.829819 | 4.158157e-55 | -8.615850e-47 |
| Msa0055590 | Msa0110520 | 0.845226 | 4.633825e-59 | -8.615850e-47 |
| Msa0055650 | Msa0110520 | 0.843681 | 1.206328e-58 | -8.615850e-47 |
| Msa0056550 | Msa0110520 | 0.803610 | 3.210504e-49 | -8.615850e-47 |
| Msa0060600 | Msa0110520 | 0.828124 | 1.070211e-54 | -8.615850e-47 |
| Msa0062750 | Msa0110520 | 0.813557 | 2.409491e-51 | -8.615850e-47 |
| Msa0077330 | Msa0110520 | 0.839176 | 1.853602e-57 | -8.615850e-47 |
| Msa0083160 | Msa0110520 | 0.820195 | 7.797042e-53 | -8.615850e-47 |
| Msa0086820 | Msa0110520 | 0.857613 | 1.448721e-62 | -8.615850e-47 |
| Msa0093440 | Msa0110520 | 0.819528 | 1.107548e-52 | -8.615850e-47 |
| Msa0096230 | Msa0110520 | 0.820305 | 7.356685e-53 | -8.615850e-47 |
| Msa0101060 | Msa0110520 | 0.818389 | 2.010678e-52 | -8.615850e-47 |
| Msa0105340 | Msa0110520 | 0.844812 | 5.995027e-59 | -8.615850e-47 |
| Msa0110520 | Msa0133670 | 0.856141 | 3.931827e-62 | -8.615850e-47 |
| Msa0110520 | Msa0133880 | 0.860264 | 2.332082e-63 | -8.615850e-47 |
| Msa0110520 | Msa0134550 | 0.801407 | 9.136472e-49 | -8.615850e-47 |
| Msa0110520 | Msa0146600 | 0.804561 | 2.036728e-49 | -8.615850e-47 |
| Msa0110520 | Msa0151690 | 0.815815 | 7.617661e-52 | -8.615850e-47 |
| Msa0110520 | Msa0162030 | 0.802309 | 5.964831e-49 | -8.615850e-47 |
| Msa0110520 | Msa0162050 | 0.804657 | 1.944914e-49 | -8.615850e-47 |
| Msa0110520 | Msa0162070 | 0.822532 | 2.252756e-53 | -8.615850e-47 |
| Msa0110520 | Msa0169960 | 0.832354 | 9.914878e-56 | -8.615850e-47 |
| Msa0110520 | Msa0175530 | 0.802699 | 4.956254e-49 | -8.615850e-47 |
| Msa0110520 | Msa0180980 | 0.813144 | 2.969844e-51 | -8.615850e-47 |
| Msa0110520 | Msa0181290 | 0.853291 | 2.634089e-61 | -8.615850e-47 |
| Msa0110520 | Msa0184030 | 0.818291 | 2.116812e-52 | -8.615850e-47 |
| Msa0110520 | Msa0184120 | 0.856352 | 3.409125e-62 | -8.615850e-47 |
| Msa0110520 | Msa0206600 | 0.802315 | 5.948200e-49 | -8.615850e-47 |
| Msa0110520 | Msa0207530 | 0.837319 | 5.575482e-57 | -8.615850e-47 |
| Msa0110520 | Msa0207900 | 0.848937 | 4.457942e-60 | -8.615850e-47 |
| Msa0110520 | Msa0207990 | 0.803944 | 2.737440e-49 | -8.615850e-47 |
| Msa0110520 | Msa0211010 | 0.806636 | 7.470918e-50 | -8.615850e-47 |
| Msa0110520 | Msa0213090 | 0.820246 | 7.589301e-53 | -8.615850e-47 |
| Msa0110520 | Msa0216560 | 0.801031 | 1.090522e-48 | -8.615850e-47 |
| Msa0110520 | Msa0221800 | 0.811761 | 5.955388e-51 | -8.615850e-47 |
| Msa0110520 | Msa0221940 | 0.810742 | 9.907337e-51 | -8.615850e-47 |
| Msa0110520 | Msa0222510 | 0.808104 | 3.648999e-50 | -8.615850e-47 |
| Msa0110520 | Msa0222720 | 0.804036 | 2.618709e-49 | -8.615850e-47 |
| Msa0110520 | Msa0227800 | 0.803382 | 3.581131e-49 | -8.615850e-47 |
| Msa0110520 | Msa0243620 | 0.816028 | 6.831011e-52 | -8.615850e-47 |
| Msa0110520 | Msa0253370 | 0.844293 | 8.272255e-59 | -8.615850e-47 |
| Msa0110520 | Msa0256170 | 0.825120 | 5.573538e-54 | -8.615850e-47 |
| Msa0110520 | Msa0256430 | 0.807525 | 4.843970e-50 | -8.615850e-47 |
| Msa0110520 | Msa0260960 | 0.821244 | 4.476778e-53 | -8.615850e-47 |
| Msa0110520 | Msa0260970 | 0.819315 | 1.238869e-52 | -8.615850e-47 |
| Msa0110520 | Msa0264020 | 0.802218 | 6.227821e-49 | -8.615850e-47 |
| Msa0110520 | Msa0266000 | -0.810600 | 1.063486e-50 | -8.615850e-47 |
| Msa0110520 | Msa0270610 | 0.849139 | 3.915832e-60 | -8.615850e-47 |
| Msa0110520 | Msa0272420 | 0.806980 | 6.319361e-50 | -8.615850e-47 |
| Msa0110520 | Msa0282200 | 0.817025 | 4.083109e-52 | -8.615850e-47 |
| Msa0110520 | Msa0284870 | 0.803562 | 3.285102e-49 | -8.615850e-47 |
| Msa0110520 | Msa0288270 | 0.807508 | 4.884908e-50 | -8.615850e-47 |
| Msa0110520 | Msa0288320 | 0.822188 | 2.706804e-53 | -8.615850e-47 |
| Msa0110520 | Msa0290950 | 0.816743 | 4.724679e-52 | -8.615850e-47 |
| Msa0110520 | Msa0290970 | 0.813302 | 2.742547e-51 | -8.615850e-47 |
| Msa0110520 | Msa0292180 | 0.810338 | 1.211467e-50 | -8.615850e-47 |
| Msa0110520 | Msa0295840 | 0.820405 | 6.978163e-53 | -8.615850e-47 |
| Msa0110520 | Msa0301300 | 0.839961 | 1.158491e-57 | -8.615850e-47 |
| Msa0110520 | Msa0301800 | 0.803682 | 3.103043e-49 | -8.615850e-47 |
| Msa0110520 | Msa0304990 | 0.831555 | 1.562518e-55 | -8.615850e-47 |
| Msa0110520 | Msa0306130 | 0.819681 | 1.022244e-52 | -8.615850e-47 |
| Msa0110520 | Msa0311330 | 0.803533 | 3.331927e-49 | -8.615850e-47 |
| Msa0110520 | Msa0323630 | 0.812947 | 3.279856e-51 | -8.615850e-47 |
| Msa0110520 | Msa0330270 | 0.842010 | 3.356047e-58 | -8.615850e-47 |
| Msa0110520 | Msa0330400 | 0.836504 | 9.000751e-57 | -8.615850e-47 |
| Msa0110520 | Msa0338570 | 0.806649 | 7.423740e-50 | -8.615850e-47 |
| Msa0110520 | Msa0351220 | 0.822055 | 2.906292e-53 | -8.615850e-47 |
| Msa0110520 | Msa0351230 | 0.845014 | 5.287000e-59 | -8.615850e-47 |
| Msa0110520 | Msa0363460 | 0.807515 | 4.867194e-50 | -8.615850e-47 |
| Msa0110520 | Msa0365870 | 0.803703 | 3.071611e-49 | -8.615850e-47 |
| Msa0110520 | Msa0369750 | 0.818365 | 2.035714e-52 | -8.615850e-47 |
| Msa0110520 | Msa0371610 | 0.844837 | 5.902629e-59 | -8.615850e-47 |
| Msa0110520 | Msa0389830 | 0.815100 | 1.099051e-51 | -8.615850e-47 |
| Msa0110520 | Msa0406600 | 0.833834 | 4.247797e-56 | -8.615850e-47 |
| Msa0110520 | Msa0409820 | 0.804196 | 2.426235e-49 | -8.615850e-47 |
| Msa0110520 | Msa0411000 | 0.835954 | 1.241943e-56 | -8.615850e-47 |
| Msa0110520 | Msa0411800 | 0.800509 | 1.393729e-48 | -8.615850e-47 |
| Msa0110520 | Msa0413740 | 0.820703 | 5.962984e-53 | -8.615850e-47 |
| Msa0110520 | Msa0420070 | 0.824532 | 7.671314e-54 | -8.615850e-47 |
| Msa0110520 | Msa0423110 | 0.810421 | 1.162249e-50 | -8.615850e-47 |
| Msa0110520 | Msa0423600 | 0.825258 | 5.171164e-54 | -8.615850e-47 |
| Msa0110520 | Msa0427050 | 0.829650 | 4.571745e-55 | -8.615850e-47 |
| Msa0110520 | Msa0429130 | 0.804057 | 2.592919e-49 | -8.615850e-47 |
| Msa0110520 | Msa0434890 | -0.828890 | 6.990937e-55 | -8.615850e-47 |
| Msa0110520 | Msa0440110 | 0.834251 | 3.339697e-56 | -8.615850e-47 |
| Msa0110520 | Msa0448400 | 0.802013 | 6.863030e-49 | -8.615850e-47 |
| Msa0110520 | Msa0452010 | 0.821939 | 3.091909e-53 | -8.615850e-47 |
| Msa0110520 | Msa0455230 | 0.806438 | 8.227398e-50 | -8.615850e-47 |
| Msa0110520 | Msa0458790 | 0.827470 | 1.537420e-54 | -8.615850e-47 |
| Msa0110520 | Msa0463960 | 0.825251 | 5.189633e-54 | -8.615850e-47 |
| Msa0110520 | Msa0466100 | 0.815173 | 1.058542e-51 | -8.615850e-47 |
| Msa0110520 | Msa0470650 | 0.801811 | 7.548109e-49 | -8.615850e-47 |
| Msa0110520 | Msa0471890 | 0.806347 | 8.595671e-50 | -8.615850e-47 |
| Msa0110520 | Msa0473450 | 0.831275 | 1.831061e-55 | -8.615850e-47 |
| Msa0110520 | Msa0475360 | 0.800609 | 1.329939e-48 | -8.615850e-47 |
| Msa0110520 | Msa0481320 | 0.810155 | 1.326597e-50 | -8.615850e-47 |
| Msa0110520 | Msa0492740 | 0.803052 | 4.189277e-49 | -8.615850e-47 |
| Msa0110520 | Msa0502500 | 0.810665 | 1.029715e-50 | -8.615850e-47 |
| Msa0110520 | Msa0502910 | 0.805485 | 1.304769e-49 | -8.615850e-47 |
| Msa0110520 | Msa0505390 | 0.821334 | 4.266768e-53 | -8.615850e-47 |
| Msa0110520 | Msa0505660 | 0.817543 | 3.122242e-52 | -8.615850e-47 |
| Msa0110520 | Msa0509510 | 0.813027 | 3.150231e-51 | -8.615850e-47 |
| Msa0110520 | Msa0511890 | 0.824746 | 6.829750e-54 | -8.615850e-47 |
| Msa0110520 | Msa0515680 | 0.800764 | 1.236634e-48 | -8.615850e-47 |
| Msa0110520 | Msa0542040 | 0.822725 | 2.030962e-53 | -8.615850e-47 |
| Msa0110520 | Msa0548720 | 0.809598 | 1.748587e-50 | -8.615850e-47 |
| Msa0110520 | Msa0549740 | 0.844637 | 6.681144e-59 | -8.615850e-47 |
| Msa0110520 | Msa0553520 | 0.803512 | 3.365703e-49 | -8.615850e-47 |
| Msa0110520 | Msa0558890 | 0.819278 | 1.262952e-52 | -8.615850e-47 |
| Msa0110520 | Msa0563140 | 0.805428 | 1.341117e-49 | -8.615850e-47 |
| Msa0110520 | Msa0581340 | 0.809965 | 1.457584e-50 | -8.615850e-47 |
| Msa0110520 | Msa0585930 | 0.811290 | 7.538298e-51 | -8.615850e-47 |
| Msa0110520 | Msa0598250 | 0.821154 | 4.695891e-53 | -8.615850e-47 |
| Msa0110520 | Msa0599250 | 0.807434 | 5.063497e-50 | -8.615850e-47 |
| Msa0110520 | Msa0601710 | 0.800418 | 1.454622e-48 | -8.615850e-47 |
| Msa0110520 | Msa0603680 | 0.800415 | 1.456960e-48 | -8.615850e-47 |
| Msa0110520 | Msa0605230 | 0.819044 | 1.427892e-52 | -8.615850e-47 |
| Msa0110520 | Msa0606060 | 0.802968 | 4.360209e-49 | -8.615850e-47 |
| Msa0110520 | Msa0617370 | 0.815786 | 7.732623e-52 | -8.615850e-47 |
| Msa0110520 | Msa0620640 | 0.839174 | 1.855468e-57 | -8.615850e-47 |
| Msa0110520 | Msa0621890 | 0.814095 | 1.834195e-51 | -8.615850e-47 |
| Msa0110520 | Msa0622390 | 0.824455 | 7.998503e-54 | -8.615850e-47 |
| Msa0110520 | Msa0626230 | 0.823100 | 1.660958e-53 | -8.615850e-47 |
| Msa0110520 | Msa0626890 | 0.819566 | 1.086001e-52 | -8.615850e-47 |
| Msa0110520 | Msa0635470 | 0.827945 | 1.181624e-54 | -8.615850e-47 |
| Msa0110520 | Msa0635990 | 0.801834 | 7.468024e-49 | -8.615850e-47 |
| Msa0110520 | Msa0639030 | 0.844419 | 7.651318e-59 | -8.615850e-47 |
| Msa0110520 | Msa0641020 | 0.814194 | 1.744550e-51 | -8.615850e-47 |
| Msa0110520 | Msa0646390 | 0.863619 | 2.187372e-64 | -8.615850e-47 |
| Msa0110520 | Msa0647000 | 0.816671 | 4.902853e-52 | -8.615850e-47 |
| Msa0110520 | Msa0648300 | 0.807616 | 4.633280e-50 | -8.615850e-47 |
| Msa0110520 | Msa0653710 | 0.823076 | 1.682753e-53 | -8.615850e-47 |
| Msa0110520 | Msa0654060 | 0.824603 | 7.380299e-54 | -8.615850e-47 |
| Msa0110520 | Msa0656270 | 0.807811 | 4.212784e-50 | -8.615850e-47 |
| Msa0110520 | Msa0662850 | 0.807126 | 5.887029e-50 | -8.615850e-47 |
| Msa0110520 | Msa0664110 | 0.802081 | 6.644415e-49 | -8.615850e-47 |
| Msa0110520 | Msa0664130 | 0.824997 | 5.958611e-54 | -8.615850e-47 |
| Msa0110520 | Msa0678240 | 0.837708 | 4.431331e-57 | -8.615850e-47 |
| Msa0110520 | Msa0685880 | 0.842721 | 2.174560e-58 | -8.615850e-47 |
| Msa0110520 | Msa0686610 | 0.800802 | 1.214883e-48 | -8.615850e-47 |
| Msa0110520 | Msa0697140 | 0.803527 | 3.341420e-49 | -8.615850e-47 |
| Msa0110520 | Msa0697200 | 0.812724 | 3.671675e-51 | -8.615850e-47 |
| Msa0110520 | Msa0697600 | 0.830787 | 2.411966e-55 | -8.615850e-47 |
| Msa0110520 | Msa0698900 | 0.802762 | 4.809332e-49 | -8.615850e-47 |
| Msa0110520 | Msa0700070 | 0.818479 | 1.918513e-52 | -8.615850e-47 |
| Msa0110520 | Msa0709820 | -0.817193 | 3.743792e-52 | -8.615850e-47 |
| Msa0110520 | Msa0712440 | 0.807132 | 5.867744e-50 | -8.615850e-47 |
| Msa0110520 | Msa0714020 | 0.817016 | 4.103836e-52 | -8.615850e-47 |
| Msa0110520 | Msa0714160 | 0.812597 | 3.913791e-51 | -8.615850e-47 |
| Msa0110520 | Msa0719340 | 0.814172 | 1.764163e-51 | -8.615850e-47 |
| Msa0110520 | Msa0721150 | 0.812933 | 3.304353e-51 | -8.615850e-47 |
| Msa0110520 | Msa0724490 | 0.811317 | 7.438715e-51 | -8.615850e-47 |
| Msa0110520 | Msa0726610 | 0.822264 | 2.599453e-53 | -8.615850e-47 |
| Msa0110520 | Msa0736930 | 0.840805 | 6.967070e-58 | -8.615850e-47 |
| Msa0110520 | Msa0739570 | 0.820076 | 8.300789e-53 | -8.615850e-47 |
| Msa0110520 | Msa0739610 | 0.821042 | 4.983461e-53 | -8.615850e-47 |
| Msa0110520 | Msa0749900 | 0.814265 | 1.682616e-51 | -8.615850e-47 |
| Msa0110520 | Msa0756410 | 0.848482 | 5.959356e-60 | -8.615850e-47 |
| Msa0110520 | Msa0756480 | 0.828011 | 1.139720e-54 | -8.615850e-47 |
| Msa0110520 | Msa0761760 | 0.805688 | 1.182884e-49 | -8.615850e-47 |
| Msa0110520 | Msa0765010 | 0.851810 | 6.961594e-61 | -8.615850e-47 |
| Msa0110520 | Msa0765020 | 0.834022 | 3.810666e-56 | -8.615850e-47 |
| Msa0110520 | Msa0765040 | 0.846350 | 2.295209e-59 | -8.615850e-47 |
| Msa0110520 | Msa0771960 | 0.816691 | 4.853097e-52 | -8.615850e-47 |
| Msa0110520 | Msa0772040 | 0.805836 | 1.101410e-49 | -8.615850e-47 |
| Msa0110520 | Msa0772150 | 0.816462 | 5.462048e-52 | -8.615850e-47 |
| Msa0110520 | Msa0778580 | 0.805978 | 1.028321e-49 | -8.615850e-47 |
| Msa0110520 | Msa0782330 | 0.804949 | 1.690026e-49 | -8.615850e-47 |
| Msa0110520 | Msa0792510 | 0.809139 | 2.193354e-50 | -8.615850e-47 |
| Msa0110520 | Msa0796450 | 0.803230 | 3.848601e-49 | -8.615850e-47 |
| Msa0110520 | Msa0797620 | 0.810031 | 1.410638e-50 | -8.615850e-47 |
| Msa0110520 | Msa0801390 | 0.803681 | 3.103806e-49 | -8.615850e-47 |
| Msa0110520 | Msa0804060 | 0.803667 | 3.124751e-49 | -8.615850e-47 |
| Msa0110520 | Msa0815950 | 0.820440 | 6.850785e-53 | -8.615850e-47 |
| Msa0110520 | Msa0818950 | 0.800597 | 1.337325e-48 | -8.615850e-47 |
| Msa0110520 | Msa0819740 | 0.820909 | 5.346486e-53 | -8.615850e-47 |
| Msa0110520 | Msa0830120 | 0.819666 | 1.030373e-52 | -8.615850e-47 |
| Msa0110520 | Msa0830450 | 0.821988 | 3.011885e-53 | -8.615850e-47 |
| Msa0110520 | Msa0835510 | 0.807966 | 3.903272e-50 | -8.615850e-47 |
| Msa0110520 | Msa0836190 | 0.808707 | 2.713848e-50 | -8.615850e-47 |
| Msa0110520 | Msa0839730 | 0.814268 | 1.679804e-51 | -8.615850e-47 |
| Msa0110520 | Msa0843280 | 0.801117 | 1.047449e-48 | -8.615850e-47 |
| Msa0110520 | Msa0844350 | 0.841768 | 3.890288e-58 | -8.615850e-47 |
| Msa0110520 | Msa0855520 | 0.804621 | 1.978560e-49 | -8.615850e-47 |
| Msa0110520 | Msa0860270 | 0.818330 | 2.073851e-52 | -8.615850e-47 |
| Msa0110520 | Msa0861560 | 0.810005 | 1.429324e-50 | -8.615850e-47 |
| Msa0110520 | Msa0863760 | 0.803311 | 3.704407e-49 | -8.615850e-47 |
| Msa0110520 | Msa0883390 | 0.814347 | 1.613544e-51 | -8.615850e-47 |
| Msa0110520 | Msa0883410 | 0.822929 | 1.820890e-53 | -8.615850e-47 |
| Msa0110520 | Msa0883430 | 0.822224 | 2.656365e-53 | -8.615850e-47 |
| Msa0110520 | Msa0883450 | 0.808499 | 3.006139e-50 | -8.615850e-47 |
| Msa0110520 | Msa0883660 | 0.819221 | 1.301679e-52 | -8.615850e-47 |
| Msa0110520 | Msa0883670 | 0.837204 | 5.966519e-57 | -8.615850e-47 |
| Msa0110520 | Msa0883700 | 0.804115 | 2.522354e-49 | -8.615850e-47 |
| Msa0110520 | Msa0887000 | 0.833473 | 5.226089e-56 | -8.615850e-47 |
| Msa0110520 | Msa0887070 | 0.830041 | 3.672102e-55 | -8.615850e-47 |
| Msa0110520 | Msa0897390 | 0.812599 | 3.910370e-51 | -8.615850e-47 |
| Msa0110520 | Msa0900200 | 0.817104 | 3.920483e-52 | -8.615850e-47 |
| Msa0110520 | Msa0903730 | 0.835957 | 1.239502e-56 | -8.615850e-47 |
| Msa0110520 | Msa0934830 | 0.807510 | 4.880073e-50 | -8.615850e-47 |
| Msa0110520 | Msa0950410 | 0.821661 | 3.585532e-53 | -8.615850e-47 |
| Msa0110520 | Msa0951720 | 0.840849 | 6.787408e-58 | -8.615850e-47 |
| Msa0110520 | Msa0964680 | 0.800695 | 1.277155e-48 | -8.615850e-47 |
| Msa0110520 | Msa0965520 | 0.804140 | 2.491862e-49 | -8.615850e-47 |
| Msa0110520 | Msa0967450 | 0.822883 | 1.866319e-53 | -8.615850e-47 |
| Msa0110520 | Msa0973130 | 0.806174 | 9.351419e-50 | -8.615850e-47 |
| Msa0110520 | Msa0973230 | 0.831854 | 1.317856e-55 | -8.615850e-47 |
| Msa0110520 | Msa0978000 | 0.841952 | 3.477239e-58 | -8.615850e-47 |
| Msa0110520 | Msa0984830 | 0.813730 | 2.207783e-51 | -8.615850e-47 |
| Msa0110520 | Msa0984840 | 0.839072 | 1.971712e-57 | -8.615850e-47 |
| Msa0110520 | Msa0984850 | 0.838019 | 3.687267e-57 | -8.615850e-47 |
| Msa0110520 | Msa0986870 | 0.806521 | 7.901755e-50 | -8.615850e-47 |
| Msa0110520 | Msa0988500 | 0.820949 | 5.233439e-53 | -8.615850e-47 |
| Msa0110520 | Msa1008960 | 0.818951 | 1.499365e-52 | -8.615850e-47 |
| Msa0110520 | Msa1016110 | 0.819771 | 9.749602e-53 | -8.615850e-47 |
| Msa0110520 | Msa1020710 | 0.813053 | 3.109379e-51 | -8.615850e-47 |
| Msa0110520 | Msa1024580 | 0.819358 | 1.211132e-52 | -8.615850e-47 |
| Msa0110520 | Msa1030280 | 0.808549 | 2.932443e-50 | -8.615850e-47 |
| Msa0110520 | Msa1031220 | 0.849941 | 2.340719e-60 | -8.615850e-47 |
| Msa0110520 | Msa1032350 | 0.823002 | 1.750961e-53 | -8.615850e-47 |
| Msa0110520 | Msa1033670 | 0.825899 | 3.644134e-54 | -8.615850e-47 |
| Msa0110520 | Msa1041550 | 0.851067 | 1.129797e-60 | -8.615850e-47 |
| Msa0110520 | Msa1044040 | 0.820742 | 5.839063e-53 | -8.615850e-47 |
| Msa0110520 | Msa1044450 | 0.821218 | 4.537092e-53 | -8.615850e-47 |
| Msa0110520 | Msa1050320 | 0.800557 | 1.362910e-48 | -8.615850e-47 |
| Msa0110520 | Msa1067710 | 0.811243 | 7.716840e-51 | -8.615850e-47 |
| Msa0110520 | Msa1069300 | 0.845594 | 3.683685e-59 | -8.615850e-47 |
| Msa0110520 | Msa1071310 | 0.807975 | 3.887489e-50 | -8.615850e-47 |
| Msa0110520 | Msa1080770 | 0.802551 | 5.317606e-49 | -8.615850e-47 |
| Msa0110520 | Msa1081530 | 0.845454 | 4.020704e-59 | -8.615850e-47 |
| Msa0110520 | Msa1081700 | 0.804921 | 1.712477e-49 | -8.615850e-47 |
| Msa0110520 | Msa1099030 | 0.813823 | 2.106142e-51 | -8.615850e-47 |
| Msa0110520 | Msa1102180 | 0.806225 | 9.122353e-50 | -8.615850e-47 |
| Msa0110520 | Msa1108530 | 0.801395 | 9.190089e-49 | -8.615850e-47 |
| Msa0110520 | Msa1113210 | 0.819190 | 1.322987e-52 | -8.615850e-47 |
| Msa0110520 | Msa1117830 | 0.806103 | 9.677569e-50 | -8.615850e-47 |
| Msa0110520 | Msa1140010 | 0.801268 | 9.753873e-49 | -8.615850e-47 |
| Msa0110520 | Msa1152280 | 0.808914 | 2.450056e-50 | -8.615850e-47 |
| Msa0110520 | Msa1157160 | 0.806071 | 9.829407e-50 | -8.615850e-47 |
| Msa0110520 | Msa1158160 | 0.811283 | 7.565542e-51 | -8.615850e-47 |
| Msa0110520 | Msa1159360 | 0.801959 | 7.039133e-49 | -8.615850e-47 |
| Msa0110520 | Msa1161520 | 0.811273 | 7.602181e-51 | -8.615850e-47 |
| Msa0110520 | Msa1166450 | 0.851862 | 6.731879e-61 | -8.615850e-47 |
| Msa0110520 | Msa1166970 | 0.802173 | 6.359780e-49 | -8.615850e-47 |
| Msa0110520 | Msa1175590 | 0.817894 | 2.601751e-52 | -8.615850e-47 |
| Msa0110520 | Msa1182400 | 0.815741 | 7.912848e-52 | -8.615850e-47 |
| Msa0110520 | Msa1182780 | 0.814416 | 1.558071e-51 | -8.615850e-47 |
| Msa0110520 | Msa1184580 | 0.814153 | 1.780829e-51 | -8.615850e-47 |
| Msa0110520 | Msa1188380 | 0.800313 | 1.528210e-48 | -8.615850e-47 |
| Msa0110520 | Msa1191390 | 0.827801 | 1.279783e-54 | -8.615850e-47 |
| Msa0110520 | Msa1195860 | 0.803200 | 3.904108e-49 | -8.615850e-47 |
| Msa0110520 | Msa1201990 | 0.827561 | 1.461548e-54 | -8.615850e-47 |
| Msa0110520 | Msa1208250 | 0.849887 | 2.422210e-60 | -8.615850e-47 |
| Msa0110520 | Msa1212740 | 0.826529 | 2.581221e-54 | -8.615850e-47 |
| Msa0110520 | Msa1212960 | 0.800442 | 1.438734e-48 | -8.615850e-47 |
| Msa0110520 | Msa1216700 | 0.805286 | 1.436245e-49 | -8.615850e-47 |
| Msa0110520 | Msa1220230 | 0.800059 | 1.721638e-48 | -8.615850e-47 |
| Msa0110520 | Msa1221260 | 0.808912 | 2.453027e-50 | -8.615850e-47 |
| Msa0110520 | Msa1226600 | 0.818790 | 1.631195e-52 | -8.615850e-47 |
| Msa0110520 | Msa1230190 | 0.812410 | 4.300676e-51 | -8.615850e-47 |
| Msa0110520 | Msa1231520 | 0.814310 | 1.644058e-51 | -8.615850e-47 |
| Msa0110520 | Msa1235760 | 0.823310 | 1.483576e-53 | -8.615850e-47 |
| Msa0110520 | Msa1235770 | 0.842707 | 2.193190e-58 | -8.615850e-47 |
| Msa0110520 | Msa1237260 | 0.802443 | 5.597846e-49 | -8.615850e-47 |
| Msa0110520 | Msa1238130 | 0.804977 | 1.666708e-49 | -8.615850e-47 |
| Msa0110520 | Msa1238370 | 0.850998 | 1.181311e-60 | -8.615850e-47 |
| Msa0110520 | Msa1238480 | 0.809837 | 1.553542e-50 | -8.615850e-47 |
| Msa0110520 | Msa1242430 | 0.836128 | 1.121650e-56 | -8.615850e-47 |
| Msa0110520 | Msa1248400 | 0.816612 | 5.055805e-52 | -8.615850e-47 |
| Msa0110520 | Msa1254470 | 0.807447 | 5.032629e-50 | -8.615850e-47 |
| Msa0110520 | Msa1254770 | 0.804833 | 1.786626e-49 | -8.615850e-47 |
| Msa0110520 | Msa1265070 | 0.811439 | 6.995722e-51 | -8.615850e-47 |
| Msa0110520 | Msa1272130 | 0.806789 | 6.934408e-50 | -8.615850e-47 |
| Msa0110520 | Msa1274310 | 0.832698 | 8.149258e-56 | -8.615850e-47 |
| Msa0110520 | Msa1279860 | 0.801738 | 7.813265e-49 | -8.615850e-47 |
| Msa0110520 | Msa1287160 | 0.838851 | 2.248746e-57 | -8.615850e-47 |
| Msa0110520 | Msa1287340 | 0.837950 | 3.840863e-57 | -8.615850e-47 |
| Msa0110520 | Msa1289340 | 0.801183 | 1.015342e-48 | -8.615850e-47 |
| Msa0110520 | Msa1295010 | 0.829881 | 4.015595e-55 | -8.615850e-47 |
| Msa0110520 | Msa1304850 | 0.820647 | 6.142219e-53 | -8.615850e-47 |
| Msa0110520 | Msa1306700 | 0.816173 | 6.338015e-52 | -8.615850e-47 |
| Msa0110520 | Msa1309910 | 0.814976 | 1.171011e-51 | -8.615850e-47 |
| Msa0110520 | Msa1317710 | 0.800018 | 1.754579e-48 | -8.615850e-47 |
| Msa0110520 | Msa1319440 | 0.843011 | 1.820710e-58 | -8.615850e-47 |
| Msa0110520 | Msa1327820 | 0.818350 | 2.052126e-52 | -8.615850e-47 |
| Msa0110520 | Msa1328600 | 0.814902 | 1.215954e-51 | -8.615850e-47 |
| Msa0110520 | Msa1328790 | 0.802346 | 5.860179e-49 | -8.615850e-47 |
| Msa0110520 | Msa1329990 | 0.820904 | 5.359376e-53 | -8.615850e-47 |
| Msa0110520 | Msa1331730 | 0.861478 | 9.977343e-64 | -8.615850e-47 |
| Msa0110520 | Msa1333430 | 0.826779 | 2.249022e-54 | -8.615850e-47 |
| Msa0110520 | Msa1337340 | 0.830257 | 3.252028e-55 | -8.615850e-47 |
| Msa0110520 | Msa1343340 | 0.828382 | 9.275021e-55 | -8.615850e-47 |
| Msa0110520 | Msa1343770 | 0.831232 | 1.875402e-55 | -8.615850e-47 |
| Msa0110520 | Msa1355260 | 0.805500 | 1.295785e-49 | -8.615850e-47 |
| Msa0110520 | Msa1357170 | 0.802254 | 6.120912e-49 | -8.615850e-47 |
| Msa0110520 | Msa1357380 | 0.854559 | 1.135203e-61 | -8.615850e-47 |
| Msa0110520 | Msa1357720 | 0.853691 | 2.021314e-61 | -8.615850e-47 |
| Msa0110520 | Msa1360380 | 0.801217 | 9.991989e-49 | -8.615850e-47 |
| Msa0110520 | Msa1365040 | -0.824208 | 9.140163e-54 | -8.615850e-47 |
| Msa0110520 | Msa1366700 | 0.850088 | 2.128062e-60 | -8.615850e-47 |
| Msa0110520 | Msa1367390 | -0.805737 | 1.155525e-49 | -8.615850e-47 |
| Msa0110520 | Msa1373950 | 0.817860 | 2.648584e-52 | -8.615850e-47 |
| Msa0110520 | Msa1384980 | 0.811429 | 7.031254e-51 | -8.615850e-47 |
| Msa0110520 | Msa1385940 | 0.807694 | 4.461080e-50 | -8.615850e-47 |
| Msa0110520 | Msa1386020 | 0.806464 | 8.121331e-50 | -8.615850e-47 |
| Msa0110520 | Msa1386520 | 0.842093 | 3.191767e-58 | -8.615850e-47 |
| Msa0110520 | Msa1387090 | 0.815300 | 9.920508e-52 | -8.615850e-47 |
| Msa0110520 | Msa1388230 | 0.814512 | 1.483977e-51 | -8.615850e-47 |
| Msa0110520 | Msa1395640 | 0.810979 | 8.806661e-51 | -8.615850e-47 |
| Msa0110520 | Msa1397110 | 0.818582 | 1.818363e-52 | -8.615850e-47 |
| Msa0110520 | Msa1397540 | 0.837365 | 5.425447e-57 | -8.615850e-47 |
| Msa0110520 | Msa1400600 | 0.805772 | 1.135949e-49 | -8.615850e-47 |
| Msa0110520 | Msa1405470 | 0.855393 | 6.500728e-62 | -8.615850e-47 |
| Msa0110520 | Msa1408190 | 0.830272 | 3.224666e-55 | -8.615850e-47 |
| Msa0110520 | Msa1415120 | 0.810192 | 1.302410e-50 | -8.615850e-47 |
| Msa0110520 | Msa1428440 | 0.819311 | 1.241315e-52 | -8.615850e-47 |
| Msa0110520 | Msa1432250 | 0.817023 | 4.088462e-52 | -8.615850e-47 |
| Msa0110520 | Msa1433380 | 0.845592 | 3.688425e-59 | -8.615850e-47 |
| Msa0110520 | Msa1435470 | 0.807468 | 4.980732e-50 | -8.615850e-47 |
| Msa0110520 | Msa1437650 | 0.811758 | 5.963997e-51 | -8.615850e-47 |
| Msa0110520 | Msa1439160 | 0.838730 | 2.417272e-57 | -8.615850e-47 |
| Msa0110520 | Msa1440180 | 0.809236 | 2.090683e-50 | -8.615850e-47 |
| Msa0110520 | Msa1445250 | 0.802881 | 4.544916e-49 | -8.615850e-47 |
| Msa0110520 | Msa1448990 | 0.829555 | 4.821277e-55 | -8.615850e-47 |
| Msa0110520 | Msa1449740 | 0.809154 | 2.177356e-50 | -8.615850e-47 |
| Msa0110520 | Msa1450420 | 0.815168 | 1.061510e-51 | -8.615850e-47 |
| Msa0110520 | Msa1457670 | -0.825311 | 5.022497e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0110520 | MtrunA17_Chr1g0210231 | 90.975 | 277 | 7 | 1 | 10 | 268 | 58 | 334 | 3.68e-175 | 499 |
| Msa0110520 | MtrunA17_Chr8g0360481 | 61.566 | 281 | 89 | 2 | 7 | 268 | 36 | 316 | 3.56e-111 | 334 |
| Msa0110520 | MtrunA17_Chr1g0188261 | 51.095 | 274 | 114 | 2 | 15 | 268 | 24 | 297 | 2.20e-88 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0110520 | AT3G10420.1 | 69.930 | 286 | 55 | 3 | 12 | 268 | 62 | 345 | 2.57e-130 | 380 |
| Msa0110520 | AT3G10420.2 | 69.930 | 286 | 55 | 3 | 12 | 268 | 62 | 345 | 5.03e-129 | 381 |
| Msa0110520 | AT1G73170.1 | 62.800 | 250 | 75 | 1 | 37 | 268 | 80 | 329 | 7.54e-107 | 323 |
| Msa0110520 | AT1G73170.3 | 62.800 | 250 | 75 | 1 | 37 | 268 | 80 | 329 | 7.84e-107 | 324 |
| Msa0110520 | AT1G33290.1 | 53.191 | 282 | 103 | 5 | 12 | 268 | 19 | 296 | 1.54e-93 | 281 |
| Msa0110520 | AT1G73170.2 | 69.892 | 186 | 56 | 0 | 83 | 268 | 16 | 201 | 3.83e-92 | 282 |
| Msa0110520 | AT1G33290.3 | 59.910 | 222 | 69 | 2 | 67 | 268 | 1 | 222 | 7.20e-88 | 264 |
| Msa0110520 | AT1G33290.2 | 49.505 | 202 | 73 | 5 | 12 | 188 | 19 | 216 | 2.84e-54 | 177 |
| Msa0110520 | AT1G73170.4 | 67.273 | 55 | 18 | 0 | 214 | 268 | 1 | 55 | 1.44e-17 | 82.0 |
Find 76 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAAGTTGTTATGGATTT+AGG | 0.171222 | 1_3:-23374675 | Msa0110520:CDS |
| ACCATTATAATTGATGAAAT+TGG | 0.186337 | 1_3:-23373377 | Msa0110520:CDS |
| TGCAGAGCTTGATATGTTTC+TGG | 0.187322 | 1_3:-23374757 | Msa0110520:CDS |
| TCATCAATTATAATGGTTTC+AGG | 0.225693 | 1_3:+23373383 | None:intergenic |
| ATCAAGCTCTGCAGTGGTTT+CGG | 0.230123 | 1_3:+23374767 | None:intergenic |
| TCAAGCTCTGCAGTGGTTTC+GGG | 0.234045 | 1_3:+23374768 | None:intergenic |
| CTAGATTCCCTTCTGGTGAT+TGG | 0.254727 | 1_3:-23374638 | Msa0110520:CDS |
| TCCAATTTCATCAATTATAA+TGG | 0.266424 | 1_3:+23373376 | None:intergenic |
| TTAAAATGTTGACCTGATTA+AGG | 0.273025 | 1_3:+23373889 | None:intergenic |
| GTGGATACATCCAATGAAAT+TGG | 0.294748 | 1_3:-23373631 | Msa0110520:CDS |
| CTCAAATTCGGTTATGGTTA+GGG | 0.303213 | 1_3:-23375587 | None:intergenic |
| TCTCAAATTCGGTTATGGTT+AGG | 0.319065 | 1_3:-23375588 | None:intergenic |
| TGGACTCATTAAAGTTGTTA+TGG | 0.331055 | 1_3:-23374682 | Msa0110520:CDS |
| CCTTATCTTCAGATCCTTGT+TGG | 0.338669 | 1_3:-23373254 | Msa0110520:CDS |
| TTATGTTGCATATTCACATT+TGG | 0.361210 | 1_3:+23373553 | None:intergenic |
| CCACTATTACTACGCGCTTC+AGG | 0.363898 | 1_3:+23373650 | None:intergenic |
| TAGATTCCCTTCTGGTGATT+GGG | 0.380201 | 1_3:-23374637 | Msa0110520:intron |
| TCCGTCACCTCCAATTTCAT+TGG | 0.385683 | 1_3:+23373621 | None:intergenic |
| CCTCTTGCTAGATTCCCTTC+TGG | 0.390859 | 1_3:-23374645 | Msa0110520:CDS |
| TGCTCAAAGAAGAGTTCAAT+TGG | 0.393531 | 1_3:-23373321 | Msa0110520:CDS |
| TGCTAAAATCATACATGATC+TGG | 0.404375 | 1_3:-23373966 | Msa0110520:CDS |
| ATTCTTCATTATGCTTTCAA+TGG | 0.418087 | 1_3:+23373277 | None:intergenic |
| TTGGTAAAACTACCTTAATC+AGG | 0.424584 | 1_3:-23373901 | Msa0110520:intron |
| GTGAGGATCCATTTCTGATT+GGG | 0.432047 | 1_3:+23374805 | None:intergenic |
| TTCCTCATGCAGGCATAGAC+AGG | 0.433647 | 1_3:-23373594 | Msa0110520:CDS |
| TGAGGAAGGAGGTTCTATAT+TGG | 0.434005 | 1_3:-23373942 | Msa0110520:CDS |
| GGAGGTTCTATATTGGTCAT+TGG | 0.436397 | 1_3:-23373935 | Msa0110520:CDS |
| GTTTCTGGAACTTCTTCCAT+TGG | 0.437811 | 1_3:-23374742 | Msa0110520:CDS |
| TCAGAGGGTCTTCGGATTTG+AGG | 0.438891 | 1_3:+23374834 | None:intergenic |
| GATCGTTACCCAATCAGAAA+TGG | 0.439746 | 1_3:-23374813 | Msa0110520:CDS |
| GGTAACGATCAGAGGGTCTT+CGG | 0.440923 | 1_3:+23374826 | None:intergenic |
| ATATTGGTCATTGGACCTCC+TGG | 0.442400 | 1_3:-23373926 | Msa0110520:CDS |
| GGTGAGGATCCATTTCTGAT+TGG | 0.447472 | 1_3:+23374804 | None:intergenic |
| CAAAGAAGAGTTCAATTGGT+TGG | 0.455575 | 1_3:-23373317 | Msa0110520:CDS |
| GATCCTTGTTGGTGGTATAG+AGG | 0.456580 | 1_3:-23373243 | None:intergenic |
| TAATGAGTCCACCAATCTCT+TGG | 0.468779 | 1_3:+23374694 | None:intergenic |
| AACCGTCAGATGCAAATCAT+TGG | 0.469178 | 1_3:-23374025 | Msa0110520:CDS |
| CCTGAAGCGCGTAGTAATAG+TGG | 0.478310 | 1_3:-23373650 | Msa0110520:CDS |
| CCAACAAGGATCTGAAGATA+AGG | 0.493089 | 1_3:+23373254 | None:intergenic |
| CAATTGGTTGGAACAGCACA+TGG | 0.496072 | 1_3:-23373305 | Msa0110520:CDS |
| TATCTTCAGATCCTTGTTGG+TGG | 0.497033 | 1_3:-23373251 | Msa0110520:CDS |
| CAGAGAGACTGCTAGGATGC+TGG | 0.505835 | 1_3:-23373683 | Msa0110520:CDS |
| ATTGGCCTTACTTGTCGTGT+TGG | 0.509211 | 1_3:-23374007 | Msa0110520:CDS |
| CTCGACCAACACGACAAGTA+AGG | 0.517747 | 1_3:+23374002 | None:intergenic |
| GTCATTGGACCTCCTGGTGT+TGG | 0.524184 | 1_3:-23373920 | Msa0110520:CDS |
| TTGTATCGCCACCAAGAGAT+TGG | 0.524330 | 1_3:-23374705 | Msa0110520:CDS |
| TGCATCGTATAAGTGCAATT+CGG | 0.526874 | 1_3:-23374048 | Msa0110520:CDS |
| TTGAACTCTTCTTTGAGCAA+TGG | 0.538792 | 1_3:+23373325 | None:intergenic |
| TCCAATGAAATTGGAGGTGA+CGG | 0.539462 | 1_3:-23373622 | Msa0110520:CDS |
| GGCCAATGATTTGCATCTGA+CGG | 0.543218 | 1_3:+23374023 | None:intergenic |
| GACGGAGATGTTCCTCATGC+AGG | 0.549892 | 1_3:-23373604 | Msa0110520:CDS |
| AATCATACATGATCTGGTTG+AGG | 0.551401 | 1_3:-23373960 | Msa0110520:CDS |
| AATTCCATCGTCATCTCCAA+TGG | 0.559273 | 1_3:+23374726 | None:intergenic |
| ATGCAGGCATAGACAGGGCG+AGG | 0.577826 | 1_3:-23373588 | Msa0110520:CDS |
| TCTGATTGGGTAACGATCAG+AGG | 0.580957 | 1_3:+23374818 | None:intergenic |
| TGAGTCCACCAATCTCTTGG+TGG | 0.585738 | 1_3:+23374697 | None:intergenic |
| TACTTGTCGTGTTGGTCGAG+CGG | 0.590539 | 1_3:-23373999 | Msa0110520:CDS |
| GGGTTGTGAATTCGATGGTG+AGG | 0.590969 | 1_3:+23374788 | None:intergenic |
| GATTGTGCAGAGAGACTGCT+AGG | 0.591378 | 1_3:-23373690 | Msa0110520:intron |
| GATACATCCAATGAAATTGG+AGG | 0.595729 | 1_3:-23373628 | Msa0110520:CDS |
| TATCGCCACCAAGAGATTGG+TGG | 0.601041 | 1_3:-23374702 | Msa0110520:CDS |
| ATACATGATCTGGTTGAGGA+AGG | 0.605235 | 1_3:-23373956 | Msa0110520:CDS |
| CTGATTGGGTAACGATCAGA+GGG | 0.608679 | 1_3:+23374819 | None:intergenic |
| CATGATCTGGTTGAGGAAGG+AGG | 0.608961 | 1_3:-23373953 | Msa0110520:CDS |
| TCTTCCATTGGAGATGACGA+TGG | 0.616463 | 1_3:-23374730 | Msa0110520:CDS |
| TCCTCATGCAGGCATAGACA+GGG | 0.622405 | 1_3:-23373593 | Msa0110520:CDS |
| GTTTCGGGTTGTGAATTCGA+TGG | 0.624221 | 1_3:+23374783 | None:intergenic |
| GAAATGACCCAATCACCAGA+AGG | 0.627070 | 1_3:+23374630 | None:intergenic |
| AAACATATCAAGCTCTGCAG+TGG | 0.627803 | 1_3:+23374761 | None:intergenic |
| CGTGTTGGTCGAGCGGTGAG+TGG | 0.630353 | 1_3:-23373992 | Msa0110520:CDS |
| ATGAGCTATCAATACCAGAT+CGG | 0.639378 | 1_3:+23374071 | None:intergenic |
| AAATGACCCAATCACCAGAA+GGG | 0.644980 | 1_3:+23374631 | None:intergenic |
| GCCCTGTCTATGCCTGCATG+AGG | 0.661526 | 1_3:+23373592 | None:intergenic |
| CCAGAAGGGAATCTAGCAAG+AGG | 0.661778 | 1_3:+23374645 | None:intergenic |
| CAGGCATAGACAGGGCGAGG+AGG | 0.670464 | 1_3:-23373585 | Msa0110520:CDS |
| GCACCTCTATACCACCAACA+AGG | 0.695466 | 1_3:+23373240 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATCATAATAATTAT+TGG | + | chr1_3:23373270-23373289 | None:intergenic | 10.0% |
| !! | AACAAAATCATAATAATTAT+TGG | + | chr1_3:23373270-23373289 | None:intergenic | 10.0% |
| !! | TAATTTAATTGAAAACCAAT+TGG | + | chr1_3:23373447-23373466 | None:intergenic | 15.0% |
| !! | TCAAAATTCAAAAACAAAAT+CGG | + | chr1_3:23373523-23373542 | None:intergenic | 15.0% |
| !!! | TGTTTTTGAATTTTGAAATT+AGG | - | chr1_3:23373527-23373546 | Msa0110520:intron | 15.0% |
| !!! | GTTTTTGAATTTTGAAATTA+GGG | - | chr1_3:23373528-23373547 | Msa0110520:intron | 15.0% |
| !! | TATTATATTTATTGCATGTT+TGG | - | chr1_3:23373699-23373718 | Msa0110520:intron | 15.0% |
| !! | TCAAACTAGATAAAATAAAA+AGG | + | chr1_3:23375091-23375110 | None:intergenic | 15.0% |
| !! | TAATTTAATTGAAAACCAAT+TGG | + | chr1_3:23373447-23373466 | None:intergenic | 15.0% |
| !! | TCAAAATTCAAAAACAAAAT+CGG | + | chr1_3:23373523-23373542 | None:intergenic | 15.0% |
| !!! | TGTTTTTGAATTTTGAAATT+AGG | - | chr1_3:23373527-23373546 | Msa0110520:intron | 15.0% |
| !!! | GTTTTTGAATTTTGAAATTA+GGG | - | chr1_3:23373528-23373547 | Msa0110520:intron | 15.0% |
| !! | TATTATATTTATTGCATGTT+TGG | - | chr1_3:23373699-23373718 | Msa0110520:intron | 15.0% |
| !! | TCAAACTAGATAAAATAAAA+AGG | + | chr1_3:23375091-23375110 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTGTGATATTT+TGG | - | chr1_3:23373378-23373397 | Msa0110520:CDS | 20.0% |
| !!! | AGGGTTTATATTTTGATTTT+TGG | - | chr1_3:23373634-23373653 | Msa0110520:CDS | 20.0% |
| !!! | ATATTTTGATTTTTGGTCAT+TGG | - | chr1_3:23373641-23373660 | Msa0110520:CDS | 20.0% |
| !!! | TTGCTTGTGATTTTTAATTT+TGG | - | chr1_3:23373730-23373749 | Msa0110520:intron | 20.0% |
| !! | ATTAAAGTTGTTATGGATTT+AGG | - | chr1_3:23374143-23374162 | Msa0110520:intron | 20.0% |
| !! | AATTGTTTATCCAAAAATAG+AGG | + | chr1_3:23374273-23374292 | None:intergenic | 20.0% |
| !!! | TCAGTTTGTATTTTTAATGT+GGG | - | chr1_3:23374393-23374412 | Msa0110520:intron | 20.0% |
| !! | ATAACTAAATAAATGTCGAA+AGG | - | chr1_3:23374644-23374663 | Msa0110520:CDS | 20.0% |
| !! | AAAATAAAAAGGAAACTGAT+AGG | + | chr1_3:23375080-23375099 | None:intergenic | 20.0% |
| !! | ACCATTATAATTGATGAAAT+TGG | - | chr1_3:23375441-23375460 | Msa0110520:intron | 20.0% |
| !! | TCCAATTTCATCAATTATAA+TGG | + | chr1_3:23375445-23375464 | None:intergenic | 20.0% |
| !!! | TGAATTTGTTTGTGATATTT+TGG | - | chr1_3:23373378-23373397 | Msa0110520:CDS | 20.0% |
| !!! | AGGGTTTATATTTTGATTTT+TGG | - | chr1_3:23373634-23373653 | Msa0110520:CDS | 20.0% |
| !!! | ATATTTTGATTTTTGGTCAT+TGG | - | chr1_3:23373641-23373660 | Msa0110520:CDS | 20.0% |
| !!! | TTGCTTGTGATTTTTAATTT+TGG | - | chr1_3:23373730-23373749 | Msa0110520:intron | 20.0% |
| !! | ATTAAAGTTGTTATGGATTT+AGG | - | chr1_3:23374143-23374162 | Msa0110520:intron | 20.0% |
| !! | AATTGTTTATCCAAAAATAG+AGG | + | chr1_3:23374273-23374292 | None:intergenic | 20.0% |
| !!! | TCAGTTTGTATTTTTAATGT+GGG | - | chr1_3:23374393-23374412 | Msa0110520:intron | 20.0% |
| !! | ATAACTAAATAAATGTCGAA+AGG | - | chr1_3:23374644-23374663 | Msa0110520:CDS | 20.0% |
| !! | AAAATAAAAAGGAAACTGAT+AGG | + | chr1_3:23375080-23375099 | None:intergenic | 20.0% |
| !! | ACCATTATAATTGATGAAAT+TGG | - | chr1_3:23375441-23375460 | Msa0110520:intron | 20.0% |
| !! | TCCAATTTCATCAATTATAA+TGG | + | chr1_3:23375445-23375464 | None:intergenic | 20.0% |
| ! | TAAATCCACTTATTGAAAAG+GGG | + | chr1_3:23373299-23373318 | None:intergenic | 25.0% |
| ! | CTAAATCCACTTATTGAAAA+GGG | + | chr1_3:23373300-23373319 | None:intergenic | 25.0% |
| ! | TCTAAATCCACTTATTGAAA+AGG | + | chr1_3:23373301-23373320 | None:intergenic | 25.0% |
| !! | TTTCAATAAGTGGATTTAGA+TGG | - | chr1_3:23373301-23373320 | Msa0110520:CDS | 25.0% |
| ! | CTAATTCTTCAAAACAAAAG+GGG | + | chr1_3:23373337-23373356 | None:intergenic | 25.0% |
| ! | CCTAATTCTTCAAAACAAAA+GGG | + | chr1_3:23373338-23373357 | None:intergenic | 25.0% |
| ! | ACCTAATTCTTCAAAACAAA+AGG | + | chr1_3:23373339-23373358 | None:intergenic | 25.0% |
| ! | TGGTTTACAAATCATATCAA+AGG | + | chr1_3:23373427-23373446 | None:intergenic | 25.0% |
| !! | GATATGATTTGTAAACCAAT+TGG | - | chr1_3:23373429-23373448 | Msa0110520:intron | 25.0% |
| ! | TTTACAATTCTTTGAATGCA+AGG | - | chr1_3:23373844-23373863 | Msa0110520:intron | 25.0% |
| !!! | CTCAGTTTGTATTTTTAATG+TGG | - | chr1_3:23374392-23374411 | Msa0110520:intron | 25.0% |
| !!! | CAGTTTGTATTTTTAATGTG+GGG | - | chr1_3:23374394-23374413 | Msa0110520:intron | 25.0% |
| ! | GTAAAGTTAATAAAGAACGT+TGG | + | chr1_3:23374421-23374440 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTGAAGAGTAA+TGG | - | chr1_3:23374671-23374690 | Msa0110520:CDS | 25.0% |
| !!! | TTGAAGAGTAATGGATATAA+TGG | - | chr1_3:23374680-23374699 | Msa0110520:CDS | 25.0% |
| !! | TAATGGATATAATGGTTGTT+TGG | - | chr1_3:23374688-23374707 | Msa0110520:CDS | 25.0% |
| !! | GTTGTTTGGTTTATTGTTAT+AGG | - | chr1_3:23374702-23374721 | Msa0110520:CDS | 25.0% |
| !! | TTTGGTTTATTGTTATAGGT+TGG | - | chr1_3:23374706-23374725 | Msa0110520:CDS | 25.0% |
| ! | TTAAAATGTTGACCTGATTA+AGG | + | chr1_3:23374932-23374951 | None:intergenic | 25.0% |
| ! | TTATGTTGCATATTCACATT+TGG | + | chr1_3:23375268-23375287 | None:intergenic | 25.0% |
| ! | TCATCAATTATAATGGTTTC+AGG | + | chr1_3:23375438-23375457 | None:intergenic | 25.0% |
| ! | ATTCTTCATTATGCTTTCAA+TGG | + | chr1_3:23375544-23375563 | None:intergenic | 25.0% |
| ! | TAAATCCACTTATTGAAAAG+GGG | + | chr1_3:23373299-23373318 | None:intergenic | 25.0% |
| ! | CTAAATCCACTTATTGAAAA+GGG | + | chr1_3:23373300-23373319 | None:intergenic | 25.0% |
| ! | TCTAAATCCACTTATTGAAA+AGG | + | chr1_3:23373301-23373320 | None:intergenic | 25.0% |
| !! | TTTCAATAAGTGGATTTAGA+TGG | - | chr1_3:23373301-23373320 | Msa0110520:CDS | 25.0% |
| ! | CTAATTCTTCAAAACAAAAG+GGG | + | chr1_3:23373337-23373356 | None:intergenic | 25.0% |
| ! | CCTAATTCTTCAAAACAAAA+GGG | + | chr1_3:23373338-23373357 | None:intergenic | 25.0% |
| ! | ACCTAATTCTTCAAAACAAA+AGG | + | chr1_3:23373339-23373358 | None:intergenic | 25.0% |
| ! | TGGTTTACAAATCATATCAA+AGG | + | chr1_3:23373427-23373446 | None:intergenic | 25.0% |
| !! | GATATGATTTGTAAACCAAT+TGG | - | chr1_3:23373429-23373448 | Msa0110520:intron | 25.0% |
| ! | TTTACAATTCTTTGAATGCA+AGG | - | chr1_3:23373844-23373863 | Msa0110520:intron | 25.0% |
| !!! | CTCAGTTTGTATTTTTAATG+TGG | - | chr1_3:23374392-23374411 | Msa0110520:intron | 25.0% |
| !!! | CAGTTTGTATTTTTAATGTG+GGG | - | chr1_3:23374394-23374413 | Msa0110520:intron | 25.0% |
| ! | GTAAAGTTAATAAAGAACGT+TGG | + | chr1_3:23374421-23374440 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTGAAGAGTAA+TGG | - | chr1_3:23374671-23374690 | Msa0110520:CDS | 25.0% |
| !!! | TTGAAGAGTAATGGATATAA+TGG | - | chr1_3:23374680-23374699 | Msa0110520:CDS | 25.0% |
| !! | TAATGGATATAATGGTTGTT+TGG | - | chr1_3:23374688-23374707 | Msa0110520:CDS | 25.0% |
| !! | GTTGTTTGGTTTATTGTTAT+AGG | - | chr1_3:23374702-23374721 | Msa0110520:CDS | 25.0% |
| !! | TTTGGTTTATTGTTATAGGT+TGG | - | chr1_3:23374706-23374725 | Msa0110520:CDS | 25.0% |
| ! | TTAAAATGTTGACCTGATTA+AGG | + | chr1_3:23374932-23374951 | None:intergenic | 25.0% |
| ! | TTATGTTGCATATTCACATT+TGG | + | chr1_3:23375268-23375287 | None:intergenic | 25.0% |
| ! | TCATCAATTATAATGGTTTC+AGG | + | chr1_3:23375438-23375457 | None:intergenic | 25.0% |
| ! | ATTCTTCATTATGCTTTCAA+TGG | + | chr1_3:23375544-23375563 | None:intergenic | 25.0% |
| ! | TAAAACCCCTTTTCAATAAG+TGG | - | chr1_3:23373291-23373310 | Msa0110520:CDS | 30.0% |
| !!! | CCCTTTTGTTTTGAAGAATT+AGG | - | chr1_3:23373335-23373354 | Msa0110520:CDS | 30.0% |
| !!! | TGTTTTGAAGAATTAGGTTC+TGG | - | chr1_3:23373341-23373360 | Msa0110520:CDS | 30.0% |
| !! | GATTCTTTTTGATTCCAAAC+AGG | - | chr1_3:23373908-23373927 | Msa0110520:CDS | 30.0% |
| TGGACTCATTAAAGTTGTTA+TGG | - | chr1_3:23374136-23374155 | Msa0110520:intron | 30.0% | |
| CGTAAATCATCATGGTTAAT+GGG | + | chr1_3:23374221-23374240 | None:intergenic | 30.0% | |
| !! | AGCTAAGTGACTTGTTTATT+TGG | - | chr1_3:23374342-23374361 | Msa0110520:intron | 30.0% |
| CATACATCATACGTAAAAGT+GGG | + | chr1_3:23374484-23374503 | None:intergenic | 30.0% | |
| CATTAGCAAAAACTCAAGTT+TGG | + | chr1_3:23374610-23374629 | None:intergenic | 30.0% | |
| TGCTAAAATCATACATGATC+TGG | - | chr1_3:23374852-23374871 | Msa0110520:intron | 30.0% | |
| TTGGTAAAACTACCTTAATC+AGG | - | chr1_3:23374917-23374936 | Msa0110520:intron | 30.0% | |
| ! | CTTTTTACTATGTCTGTATG+TGG | - | chr1_3:23374957-23374976 | Msa0110520:intron | 30.0% |
| ATTTGCAATCTAATCTTCTG+TGG | - | chr1_3:23375354-23375373 | Msa0110520:intron | 30.0% | |
| ! | TAAAACCCCTTTTCAATAAG+TGG | - | chr1_3:23373291-23373310 | Msa0110520:CDS | 30.0% |
| !!! | CCCTTTTGTTTTGAAGAATT+AGG | - | chr1_3:23373335-23373354 | Msa0110520:CDS | 30.0% |
| !!! | TGTTTTGAAGAATTAGGTTC+TGG | - | chr1_3:23373341-23373360 | Msa0110520:CDS | 30.0% |
| !! | GATTCTTTTTGATTCCAAAC+AGG | - | chr1_3:23373908-23373927 | Msa0110520:CDS | 30.0% |
| TGGACTCATTAAAGTTGTTA+TGG | - | chr1_3:23374136-23374155 | Msa0110520:intron | 30.0% | |
| CGTAAATCATCATGGTTAAT+GGG | + | chr1_3:23374221-23374240 | None:intergenic | 30.0% | |
| !! | AGCTAAGTGACTTGTTTATT+TGG | - | chr1_3:23374342-23374361 | Msa0110520:intron | 30.0% |
| CATACATCATACGTAAAAGT+GGG | + | chr1_3:23374484-23374503 | None:intergenic | 30.0% | |
| CATTAGCAAAAACTCAAGTT+TGG | + | chr1_3:23374610-23374629 | None:intergenic | 30.0% | |
| TGCTAAAATCATACATGATC+TGG | - | chr1_3:23374852-23374871 | Msa0110520:intron | 30.0% | |
| TTGGTAAAACTACCTTAATC+AGG | - | chr1_3:23374917-23374936 | Msa0110520:intron | 30.0% | |
| ! | CTTTTTACTATGTCTGTATG+TGG | - | chr1_3:23374957-23374976 | Msa0110520:intron | 30.0% |
| ATTTGCAATCTAATCTTCTG+TGG | - | chr1_3:23375354-23375373 | Msa0110520:intron | 30.0% | |
| CTTCAAAACAAAAGGGGTTA+GGG | + | chr1_3:23373331-23373350 | None:intergenic | 35.0% | |
| TCTTCAAAACAAAAGGGGTT+AGG | + | chr1_3:23373332-23373351 | None:intergenic | 35.0% | |
| ! | CGCTGCGAATATCAAAATTT+TGG | + | chr1_3:23373485-23373504 | None:intergenic | 35.0% |
| ! | GTTGTGTTGTTGCTGAATTA+CGG | - | chr1_3:23373561-23373580 | Msa0110520:CDS | 35.0% |
| TTAGTTCCTGAGCTGAATTA+GGG | - | chr1_3:23373615-23373634 | Msa0110520:CDS | 35.0% | |
| TATAAACCCTAATTCAGCTC+AGG | + | chr1_3:23373624-23373643 | None:intergenic | 35.0% | |
| ATAAAATGGGAGACAAAGTC+AGG | + | chr1_3:23373935-23373954 | None:intergenic | 35.0% | |
| CACCAAGCATGCAATAAAAT+GGG | + | chr1_3:23373948-23373967 | None:intergenic | 35.0% | |
| TCACCAAGCATGCAATAAAA+TGG | + | chr1_3:23373949-23373968 | None:intergenic | 35.0% | |
| GCGTAAATCATCATGGTTAA+TGG | + | chr1_3:23374222-23374241 | None:intergenic | 35.0% | |
| ! | AGAGTAGAGTACCTTAGAAA+TGG | + | chr1_3:23374249-23374268 | None:intergenic | 35.0% |
| ! | CTCTACTCTACCTCTATTTT+TGG | - | chr1_3:23374260-23374279 | Msa0110520:intron | 35.0% |
| CCATACATCATACGTAAAAG+TGG | + | chr1_3:23374485-23374504 | None:intergenic | 35.0% | |
| !! | CCACTTTTACGTATGATGTA+TGG | - | chr1_3:23374482-23374501 | Msa0110520:intron | 35.0% |
| AGCTGATAACATACGAGTTT+AGG | + | chr1_3:23374576-23374595 | None:intergenic | 35.0% | |
| !!! | GTTATAGGTTGGTGAGTTTT+CGG | - | chr1_3:23374717-23374736 | Msa0110520:CDS | 35.0% |
| ATGAGCTATCAATACCAGAT+CGG | + | chr1_3:23374750-23374769 | None:intergenic | 35.0% | |
| TGCATCGTATAAGTGCAATT+CGG | - | chr1_3:23374770-23374789 | Msa0110520:CDS | 35.0% | |
| AATCATACATGATCTGGTTG+AGG | - | chr1_3:23374858-23374877 | Msa0110520:intron | 35.0% | |
| ! | TGTTTCTTTGAAAATGCCAC+TGG | - | chr1_3:23375034-23375053 | Msa0110520:intron | 35.0% |
| GTGGATACATCCAATGAAAT+TGG | - | chr1_3:23375187-23375206 | Msa0110520:intron | 35.0% | |
| GATACATCCAATGAAATTGG+AGG | - | chr1_3:23375190-23375209 | Msa0110520:intron | 35.0% | |
| TAGTACCAATCTCAGTCATT+TGG | - | chr1_3:23375291-23375310 | Msa0110520:intron | 35.0% | |
| TTAAGCCAAATGACTGAGAT+TGG | + | chr1_3:23375299-23375318 | None:intergenic | 35.0% | |
| AATTGACTGCTTCGTCTTTA+TGG | - | chr1_3:23375317-23375336 | Msa0110520:intron | 35.0% | |
| TTGAACTCTTCTTTGAGCAA+TGG | + | chr1_3:23375496-23375515 | None:intergenic | 35.0% | |
| TGCTCAAAGAAGAGTTCAAT+TGG | - | chr1_3:23375497-23375516 | Msa0110520:intron | 35.0% | |
| CAAAGAAGAGTTCAATTGGT+TGG | - | chr1_3:23375501-23375520 | Msa0110520:intron | 35.0% | |
| CTTCAAAACAAAAGGGGTTA+GGG | + | chr1_3:23373331-23373350 | None:intergenic | 35.0% | |
| TCTTCAAAACAAAAGGGGTT+AGG | + | chr1_3:23373332-23373351 | None:intergenic | 35.0% | |
| ! | CGCTGCGAATATCAAAATTT+TGG | + | chr1_3:23373485-23373504 | None:intergenic | 35.0% |
| ! | GTTGTGTTGTTGCTGAATTA+CGG | - | chr1_3:23373561-23373580 | Msa0110520:CDS | 35.0% |
| TTAGTTCCTGAGCTGAATTA+GGG | - | chr1_3:23373615-23373634 | Msa0110520:CDS | 35.0% | |
| TATAAACCCTAATTCAGCTC+AGG | + | chr1_3:23373624-23373643 | None:intergenic | 35.0% | |
| ATAAAATGGGAGACAAAGTC+AGG | + | chr1_3:23373935-23373954 | None:intergenic | 35.0% | |
| CACCAAGCATGCAATAAAAT+GGG | + | chr1_3:23373948-23373967 | None:intergenic | 35.0% | |
| TCACCAAGCATGCAATAAAA+TGG | + | chr1_3:23373949-23373968 | None:intergenic | 35.0% | |
| GCGTAAATCATCATGGTTAA+TGG | + | chr1_3:23374222-23374241 | None:intergenic | 35.0% | |
| ! | AGAGTAGAGTACCTTAGAAA+TGG | + | chr1_3:23374249-23374268 | None:intergenic | 35.0% |
| ! | CTCTACTCTACCTCTATTTT+TGG | - | chr1_3:23374260-23374279 | Msa0110520:intron | 35.0% |
| CCATACATCATACGTAAAAG+TGG | + | chr1_3:23374485-23374504 | None:intergenic | 35.0% | |
| !! | CCACTTTTACGTATGATGTA+TGG | - | chr1_3:23374482-23374501 | Msa0110520:intron | 35.0% |
| AGCTGATAACATACGAGTTT+AGG | + | chr1_3:23374576-23374595 | None:intergenic | 35.0% | |
| !!! | GTTATAGGTTGGTGAGTTTT+CGG | - | chr1_3:23374717-23374736 | Msa0110520:CDS | 35.0% |
| ATGAGCTATCAATACCAGAT+CGG | + | chr1_3:23374750-23374769 | None:intergenic | 35.0% | |
| TGCATCGTATAAGTGCAATT+CGG | - | chr1_3:23374770-23374789 | Msa0110520:CDS | 35.0% | |
| AATCATACATGATCTGGTTG+AGG | - | chr1_3:23374858-23374877 | Msa0110520:intron | 35.0% | |
| ! | TGTTTCTTTGAAAATGCCAC+TGG | - | chr1_3:23375034-23375053 | Msa0110520:intron | 35.0% |
| GTGGATACATCCAATGAAAT+TGG | - | chr1_3:23375187-23375206 | Msa0110520:intron | 35.0% | |
| GATACATCCAATGAAATTGG+AGG | - | chr1_3:23375190-23375209 | Msa0110520:intron | 35.0% | |
| TAGTACCAATCTCAGTCATT+TGG | - | chr1_3:23375291-23375310 | Msa0110520:intron | 35.0% | |
| TTAAGCCAAATGACTGAGAT+TGG | + | chr1_3:23375299-23375318 | None:intergenic | 35.0% | |
| AATTGACTGCTTCGTCTTTA+TGG | - | chr1_3:23375317-23375336 | Msa0110520:intron | 35.0% | |
| TTGAACTCTTCTTTGAGCAA+TGG | + | chr1_3:23375496-23375515 | None:intergenic | 35.0% | |
| TGCTCAAAGAAGAGTTCAAT+TGG | - | chr1_3:23375497-23375516 | Msa0110520:intron | 35.0% | |
| CAAAGAAGAGTTCAATTGGT+TGG | - | chr1_3:23375501-23375520 | Msa0110520:intron | 35.0% | |
| GTTAGTTCCTGAGCTGAATT+AGG | - | chr1_3:23373614-23373633 | Msa0110520:CDS | 40.0% | |
| ! | CTCCCATTTTATTGCATGCT+TGG | - | chr1_3:23373943-23373962 | Msa0110520:CDS | 40.0% |
| GATCGTTACCCAATCAGAAA+TGG | - | chr1_3:23374005-23374024 | Msa0110520:CDS | 40.0% | |
| GTGAGGATCCATTTCTGATT+GGG | + | chr1_3:23374016-23374035 | None:intergenic | 40.0% | |
| AAACATATCAAGCTCTGCAG+TGG | + | chr1_3:23374060-23374079 | None:intergenic | 40.0% | |
| TGCAGAGCTTGATATGTTTC+TGG | - | chr1_3:23374061-23374080 | Msa0110520:CDS | 40.0% | |
| !! | GTTTCTGGAACTTCTTCCAT+TGG | - | chr1_3:23374076-23374095 | Msa0110520:CDS | 40.0% |
| AATTCCATCGTCATCTCCAA+TGG | + | chr1_3:23374095-23374114 | None:intergenic | 40.0% | |
| TAATGAGTCCACCAATCTCT+TGG | + | chr1_3:23374127-23374146 | None:intergenic | 40.0% | |
| TAGATTCCCTTCTGGTGATT+GGG | - | chr1_3:23374181-23374200 | Msa0110520:intron | 40.0% | |
| AAATGACCCAATCACCAGAA+GGG | + | chr1_3:23374190-23374209 | None:intergenic | 40.0% | |
| AACCGTCAGATGCAAATCAT+TGG | - | chr1_3:23374793-23374812 | Msa0110520:CDS | 40.0% | |
| ATACATGATCTGGTTGAGGA+AGG | - | chr1_3:23374862-23374881 | Msa0110520:intron | 40.0% | |
| TGAGGAAGGAGGTTCTATAT+TGG | - | chr1_3:23374876-23374895 | Msa0110520:intron | 40.0% | |
| GGAGGTTCTATATTGGTCAT+TGG | - | chr1_3:23374883-23374902 | Msa0110520:intron | 40.0% | |
| !! | AAGGTAGTTTTACCAACACC+AGG | + | chr1_3:23374913-23374932 | None:intergenic | 40.0% |
| ACTATGTCTGTATGTGGAAC+TGG | - | chr1_3:23374963-23374982 | Msa0110520:intron | 40.0% | |
| CAGAAACAAACACATTCCAG+TGG | + | chr1_3:23375053-23375072 | None:intergenic | 40.0% | |
| TCCAATGAAATTGGAGGTGA+CGG | - | chr1_3:23375196-23375215 | Msa0110520:intron | 40.0% | |
| CCAACAAGGATCTGAAGATA+AGG | + | chr1_3:23375567-23375586 | None:intergenic | 40.0% | |
| CCTTATCTTCAGATCCTTGT+TGG | - | chr1_3:23375564-23375583 | Msa0110520:intron | 40.0% | |
| TATCTTCAGATCCTTGTTGG+TGG | - | chr1_3:23375567-23375586 | Msa0110520:intron | 40.0% | |
| GTTAGTTCCTGAGCTGAATT+AGG | - | chr1_3:23373614-23373633 | Msa0110520:CDS | 40.0% | |
| ! | CTCCCATTTTATTGCATGCT+TGG | - | chr1_3:23373943-23373962 | Msa0110520:CDS | 40.0% |
| GATCGTTACCCAATCAGAAA+TGG | - | chr1_3:23374005-23374024 | Msa0110520:CDS | 40.0% | |
| GTGAGGATCCATTTCTGATT+GGG | + | chr1_3:23374016-23374035 | None:intergenic | 40.0% | |
| AAACATATCAAGCTCTGCAG+TGG | + | chr1_3:23374060-23374079 | None:intergenic | 40.0% | |
| TGCAGAGCTTGATATGTTTC+TGG | - | chr1_3:23374061-23374080 | Msa0110520:CDS | 40.0% | |
| !! | GTTTCTGGAACTTCTTCCAT+TGG | - | chr1_3:23374076-23374095 | Msa0110520:CDS | 40.0% |
| AATTCCATCGTCATCTCCAA+TGG | + | chr1_3:23374095-23374114 | None:intergenic | 40.0% | |
| TAATGAGTCCACCAATCTCT+TGG | + | chr1_3:23374127-23374146 | None:intergenic | 40.0% | |
| TAGATTCCCTTCTGGTGATT+GGG | - | chr1_3:23374181-23374200 | Msa0110520:intron | 40.0% | |
| AAATGACCCAATCACCAGAA+GGG | + | chr1_3:23374190-23374209 | None:intergenic | 40.0% | |
| AACCGTCAGATGCAAATCAT+TGG | - | chr1_3:23374793-23374812 | Msa0110520:CDS | 40.0% | |
| ATACATGATCTGGTTGAGGA+AGG | - | chr1_3:23374862-23374881 | Msa0110520:intron | 40.0% | |
| TGAGGAAGGAGGTTCTATAT+TGG | - | chr1_3:23374876-23374895 | Msa0110520:intron | 40.0% | |
| GGAGGTTCTATATTGGTCAT+TGG | - | chr1_3:23374883-23374902 | Msa0110520:intron | 40.0% | |
| !! | AAGGTAGTTTTACCAACACC+AGG | + | chr1_3:23374913-23374932 | None:intergenic | 40.0% |
| ACTATGTCTGTATGTGGAAC+TGG | - | chr1_3:23374963-23374982 | Msa0110520:intron | 40.0% | |
| CAGAAACAAACACATTCCAG+TGG | + | chr1_3:23375053-23375072 | None:intergenic | 40.0% | |
| TCCAATGAAATTGGAGGTGA+CGG | - | chr1_3:23375196-23375215 | Msa0110520:intron | 40.0% | |
| CCAACAAGGATCTGAAGATA+AGG | + | chr1_3:23375567-23375586 | None:intergenic | 40.0% | |
| CCTTATCTTCAGATCCTTGT+TGG | - | chr1_3:23375564-23375583 | Msa0110520:intron | 40.0% | |
| TATCTTCAGATCCTTGTTGG+TGG | - | chr1_3:23375567-23375586 | Msa0110520:intron | 40.0% | |
| AGACAAAGTCAGGACCTGTT+TGG | + | chr1_3:23373925-23373944 | None:intergenic | 45.0% | |
| CTGATTGGGTAACGATCAGA+GGG | + | chr1_3:23374002-23374021 | None:intergenic | 45.0% | |
| TCTGATTGGGTAACGATCAG+AGG | + | chr1_3:23374003-23374022 | None:intergenic | 45.0% | |
| GGTGAGGATCCATTTCTGAT+TGG | + | chr1_3:23374017-23374036 | None:intergenic | 45.0% | |
| !! | GTTTCGGGTTGTGAATTCGA+TGG | + | chr1_3:23374038-23374057 | None:intergenic | 45.0% |
| ATCAAGCTCTGCAGTGGTTT+CGG | + | chr1_3:23374054-23374073 | None:intergenic | 45.0% | |
| TCTTCCATTGGAGATGACGA+TGG | - | chr1_3:23374088-23374107 | Msa0110520:CDS | 45.0% | |
| TTGTATCGCCACCAAGAGAT+TGG | - | chr1_3:23374113-23374132 | Msa0110520:intron | 45.0% | |
| CTAGATTCCCTTCTGGTGAT+TGG | - | chr1_3:23374180-23374199 | Msa0110520:intron | 45.0% | |
| GAAATGACCCAATCACCAGA+AGG | + | chr1_3:23374191-23374210 | None:intergenic | 45.0% | |
| TTTACGCCACGCCATTTCTA+AGG | - | chr1_3:23374235-23374254 | Msa0110520:intron | 45.0% | |
| ! | AGAGTACCTTAGAAATGGCG+TGG | + | chr1_3:23374244-23374263 | None:intergenic | 45.0% |
| TCCACTATCTGCTACTAGCT+AGG | - | chr1_3:23374545-23374564 | Msa0110520:intron | 45.0% | |
| ACCTAGCTAGTAGCAGATAG+TGG | + | chr1_3:23374549-23374568 | None:intergenic | 45.0% | |
| ! | TTTTCGGATGACAACCGATC+TGG | - | chr1_3:23374733-23374752 | Msa0110520:CDS | 45.0% |
| ! | GGCCAATGATTTGCATCTGA+CGG | + | chr1_3:23374798-23374817 | None:intergenic | 45.0% |
| !! | ATTGGCCTTACTTGTCGTGT+TGG | - | chr1_3:23374811-23374830 | Msa0110520:CDS | 45.0% |
| ATATTGGTCATTGGACCTCC+TGG | - | chr1_3:23374892-23374911 | Msa0110520:intron | 45.0% | |
| !! | GTAGTTTTACCAACACCAGG+AGG | + | chr1_3:23374910-23374929 | None:intergenic | 45.0% |
| TCCGTCACCTCCAATTTCAT+TGG | + | chr1_3:23375200-23375219 | None:intergenic | 45.0% | |
| CAATTGGTTGGAACAGCACA+TGG | - | chr1_3:23375513-23375532 | Msa0110520:intron | 45.0% | |
| AGACAAAGTCAGGACCTGTT+TGG | + | chr1_3:23373925-23373944 | None:intergenic | 45.0% | |
| CTGATTGGGTAACGATCAGA+GGG | + | chr1_3:23374002-23374021 | None:intergenic | 45.0% | |
| TCTGATTGGGTAACGATCAG+AGG | + | chr1_3:23374003-23374022 | None:intergenic | 45.0% | |
| GGTGAGGATCCATTTCTGAT+TGG | + | chr1_3:23374017-23374036 | None:intergenic | 45.0% | |
| !! | GTTTCGGGTTGTGAATTCGA+TGG | + | chr1_3:23374038-23374057 | None:intergenic | 45.0% |
| ATCAAGCTCTGCAGTGGTTT+CGG | + | chr1_3:23374054-23374073 | None:intergenic | 45.0% | |
| TCTTCCATTGGAGATGACGA+TGG | - | chr1_3:23374088-23374107 | Msa0110520:CDS | 45.0% | |
| TTGTATCGCCACCAAGAGAT+TGG | - | chr1_3:23374113-23374132 | Msa0110520:intron | 45.0% | |
| CTAGATTCCCTTCTGGTGAT+TGG | - | chr1_3:23374180-23374199 | Msa0110520:intron | 45.0% | |
| GAAATGACCCAATCACCAGA+AGG | + | chr1_3:23374191-23374210 | None:intergenic | 45.0% | |
| TTTACGCCACGCCATTTCTA+AGG | - | chr1_3:23374235-23374254 | Msa0110520:intron | 45.0% | |
| ! | AGAGTACCTTAGAAATGGCG+TGG | + | chr1_3:23374244-23374263 | None:intergenic | 45.0% |
| TCCACTATCTGCTACTAGCT+AGG | - | chr1_3:23374545-23374564 | Msa0110520:intron | 45.0% | |
| ACCTAGCTAGTAGCAGATAG+TGG | + | chr1_3:23374549-23374568 | None:intergenic | 45.0% | |
| ! | TTTTCGGATGACAACCGATC+TGG | - | chr1_3:23374733-23374752 | Msa0110520:CDS | 45.0% |
| ! | GGCCAATGATTTGCATCTGA+CGG | + | chr1_3:23374798-23374817 | None:intergenic | 45.0% |
| !! | ATTGGCCTTACTTGTCGTGT+TGG | - | chr1_3:23374811-23374830 | Msa0110520:CDS | 45.0% |
| ATATTGGTCATTGGACCTCC+TGG | - | chr1_3:23374892-23374911 | Msa0110520:intron | 45.0% | |
| !! | GTAGTTTTACCAACACCAGG+AGG | + | chr1_3:23374910-23374929 | None:intergenic | 45.0% |
| TCCGTCACCTCCAATTTCAT+TGG | + | chr1_3:23375200-23375219 | None:intergenic | 45.0% | |
| CAATTGGTTGGAACAGCACA+TGG | - | chr1_3:23375513-23375532 | Msa0110520:intron | 45.0% | |
| !! | ACATTAATTAATTAATTAAT+TGG | - | chr1_3:23374439-23374458 | Msa0110520:intron | 5.0% |
| !! | ACATTAATTAATTAATTAAT+TGG | - | chr1_3:23374439-23374458 | Msa0110520:intron | 5.0% |
| TCAGAGGGTCTTCGGATTTG+AGG | + | chr1_3:23373987-23374006 | None:intergenic | 50.0% | |
| GGTAACGATCAGAGGGTCTT+CGG | + | chr1_3:23373995-23374014 | None:intergenic | 50.0% | |
| GGGTTGTGAATTCGATGGTG+AGG | + | chr1_3:23374033-23374052 | None:intergenic | 50.0% | |
| TCAAGCTCTGCAGTGGTTTC+GGG | + | chr1_3:23374053-23374072 | None:intergenic | 50.0% | |
| TATCGCCACCAAGAGATTGG+TGG | - | chr1_3:23374116-23374135 | Msa0110520:intron | 50.0% | |
| TGAGTCCACCAATCTCTTGG+TGG | + | chr1_3:23374124-23374143 | None:intergenic | 50.0% | |
| CCAGAAGGGAATCTAGCAAG+AGG | + | chr1_3:23374176-23374195 | None:intergenic | 50.0% | |
| CCTCTTGCTAGATTCCCTTC+TGG | - | chr1_3:23374173-23374192 | Msa0110520:intron | 50.0% | |
| TGGCGTGGCGTAAATCATCA+TGG | + | chr1_3:23374229-23374248 | None:intergenic | 50.0% | |
| CTCGACCAACACGACAAGTA+AGG | + | chr1_3:23374819-23374838 | None:intergenic | 50.0% | |
| ! | TACTTGTCGTGTTGGTCGAG+CGG | - | chr1_3:23374819-23374838 | Msa0110520:CDS | 50.0% |
| CATGATCTGGTTGAGGAAGG+AGG | - | chr1_3:23374865-23374884 | Msa0110520:intron | 50.0% | |
| GATTGTGCAGAGAGACTGCT+AGG | - | chr1_3:23375128-23375147 | Msa0110520:intron | 50.0% | |
| CCACTATTACTACGCGCTTC+AGG | + | chr1_3:23375171-23375190 | None:intergenic | 50.0% | |
| CCTGAAGCGCGTAGTAATAG+TGG | - | chr1_3:23375168-23375187 | Msa0110520:intron | 50.0% | |
| TTCCTCATGCAGGCATAGAC+AGG | - | chr1_3:23375224-23375243 | Msa0110520:intron | 50.0% | |
| TCCTCATGCAGGCATAGACA+GGG | - | chr1_3:23375225-23375244 | Msa0110520:intron | 50.0% | |
| TCAGAGGGTCTTCGGATTTG+AGG | + | chr1_3:23373987-23374006 | None:intergenic | 50.0% | |
| GGTAACGATCAGAGGGTCTT+CGG | + | chr1_3:23373995-23374014 | None:intergenic | 50.0% | |
| GGGTTGTGAATTCGATGGTG+AGG | + | chr1_3:23374033-23374052 | None:intergenic | 50.0% | |
| TCAAGCTCTGCAGTGGTTTC+GGG | + | chr1_3:23374053-23374072 | None:intergenic | 50.0% | |
| TATCGCCACCAAGAGATTGG+TGG | - | chr1_3:23374116-23374135 | Msa0110520:intron | 50.0% | |
| TGAGTCCACCAATCTCTTGG+TGG | + | chr1_3:23374124-23374143 | None:intergenic | 50.0% | |
| CCAGAAGGGAATCTAGCAAG+AGG | + | chr1_3:23374176-23374195 | None:intergenic | 50.0% | |
| CCTCTTGCTAGATTCCCTTC+TGG | - | chr1_3:23374173-23374192 | Msa0110520:intron | 50.0% | |
| TGGCGTGGCGTAAATCATCA+TGG | + | chr1_3:23374229-23374248 | None:intergenic | 50.0% | |
| CTCGACCAACACGACAAGTA+AGG | + | chr1_3:23374819-23374838 | None:intergenic | 50.0% | |
| ! | TACTTGTCGTGTTGGTCGAG+CGG | - | chr1_3:23374819-23374838 | Msa0110520:CDS | 50.0% |
| CATGATCTGGTTGAGGAAGG+AGG | - | chr1_3:23374865-23374884 | Msa0110520:intron | 50.0% | |
| GATTGTGCAGAGAGACTGCT+AGG | - | chr1_3:23375128-23375147 | Msa0110520:intron | 50.0% | |
| CCACTATTACTACGCGCTTC+AGG | + | chr1_3:23375171-23375190 | None:intergenic | 50.0% | |
| CCTGAAGCGCGTAGTAATAG+TGG | - | chr1_3:23375168-23375187 | Msa0110520:intron | 50.0% | |
| TTCCTCATGCAGGCATAGAC+AGG | - | chr1_3:23375224-23375243 | Msa0110520:intron | 50.0% | |
| TCCTCATGCAGGCATAGACA+GGG | - | chr1_3:23375225-23375244 | Msa0110520:intron | 50.0% | |
| GTCATTGGACCTCCTGGTGT+TGG | - | chr1_3:23374898-23374917 | Msa0110520:intron | 55.0% | |
| CAGAGAGACTGCTAGGATGC+TGG | - | chr1_3:23375135-23375154 | Msa0110520:intron | 55.0% | |
| GACGGAGATGTTCCTCATGC+AGG | - | chr1_3:23375214-23375233 | Msa0110520:intron | 55.0% | |
| GTCATTGGACCTCCTGGTGT+TGG | - | chr1_3:23374898-23374917 | Msa0110520:intron | 55.0% | |
| CAGAGAGACTGCTAGGATGC+TGG | - | chr1_3:23375135-23375154 | Msa0110520:intron | 55.0% | |
| GACGGAGATGTTCCTCATGC+AGG | - | chr1_3:23375214-23375233 | Msa0110520:intron | 55.0% | |
| GCCCTGTCTATGCCTGCATG+AGG | + | chr1_3:23375229-23375248 | None:intergenic | 60.0% | |
| ATGCAGGCATAGACAGGGCG+AGG | - | chr1_3:23375230-23375249 | Msa0110520:intron | 60.0% | |
| GCCCTGTCTATGCCTGCATG+AGG | + | chr1_3:23375229-23375248 | None:intergenic | 60.0% | |
| ATGCAGGCATAGACAGGGCG+AGG | - | chr1_3:23375230-23375249 | Msa0110520:intron | 60.0% | |
| ! | CGTGTTGGTCGAGCGGTGAG+TGG | - | chr1_3:23374826-23374845 | Msa0110520:CDS | 65.0% |
| CAGGCATAGACAGGGCGAGG+AGG | - | chr1_3:23375233-23375252 | Msa0110520:intron | 65.0% | |
| ! | CGTGTTGGTCGAGCGGTGAG+TGG | - | chr1_3:23374826-23374845 | Msa0110520:CDS | 65.0% |
| CAGGCATAGACAGGGCGAGG+AGG | - | chr1_3:23375233-23375252 | Msa0110520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 23373244 | 23375596 | 23373244 | ID=Msa0110520;Name=Msa0110520 |
| chr1_3 | mRNA | 23373244 | 23375596 | 23373244 | ID=Msa0110520-mRNA-1;Parent=Msa0110520;Name=Msa0110520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.25|0|0.8|1|1|5|0|268 |
| chr1_3 | exon | 23375583 | 23375596 | 23375583 | ID=Msa0110520-mRNA-1:exon:8185;Parent=Msa0110520-mRNA-1 |
| chr1_3 | exon | 23374638 | 23374869 | 23374638 | ID=Msa0110520-mRNA-1:exon:8184;Parent=Msa0110520-mRNA-1 |
| chr1_3 | exon | 23373902 | 23374116 | 23373902 | ID=Msa0110520-mRNA-1:exon:8183;Parent=Msa0110520-mRNA-1 |
| chr1_3 | exon | 23373552 | 23373702 | 23373552 | ID=Msa0110520-mRNA-1:exon:8182;Parent=Msa0110520-mRNA-1 |
| chr1_3 | exon | 23373244 | 23373435 | 23373244 | ID=Msa0110520-mRNA-1:exon:8181;Parent=Msa0110520-mRNA-1 |
| chr1_3 | CDS | 23375583 | 23375596 | 23375583 | ID=Msa0110520-mRNA-1:cds;Parent=Msa0110520-mRNA-1 |
| chr1_3 | CDS | 23374638 | 23374869 | 23374638 | ID=Msa0110520-mRNA-1:cds;Parent=Msa0110520-mRNA-1 |
| chr1_3 | CDS | 23373902 | 23374116 | 23373902 | ID=Msa0110520-mRNA-1:cds;Parent=Msa0110520-mRNA-1 |
| chr1_3 | CDS | 23373552 | 23373702 | 23373552 | ID=Msa0110520-mRNA-1:cds;Parent=Msa0110520-mRNA-1 |
| chr1_3 | CDS | 23373244 | 23373435 | 23373244 | ID=Msa0110520-mRNA-1:cds;Parent=Msa0110520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
