Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476460 | RHN70436.1 | 61.404 | 57 | 20 | 1 | 34 | 88 | 40 | 96 | 1.43e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476460 | A0A396IXK8 | 61.404 | 57 | 20 | 1 | 34 | 88 | 40 | 96 | 6.84e-15 | 73.2 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0476460 | 0.825907 | 3.629150e-54 | -8.615850e-47 |
| Msa0020390 | Msa0476460 | 0.815707 | 8.053081e-52 | -8.615850e-47 |
| Msa0020410 | Msa0476460 | 0.855532 | 5.921897e-62 | -8.615850e-47 |
| Msa0026910 | Msa0476460 | 0.819239 | 1.289204e-52 | -8.615850e-47 |
| Msa0037880 | Msa0476460 | 0.819720 | 1.001474e-52 | -8.615850e-47 |
| Msa0043980 | Msa0476460 | 0.842572 | 2.381977e-58 | -8.615850e-47 |
| Msa0044000 | Msa0476460 | 0.807488 | 4.932945e-50 | -8.615850e-47 |
| Msa0051630 | Msa0476460 | 0.802206 | 6.262207e-49 | -8.615850e-47 |
| Msa0051750 | Msa0476460 | 0.815311 | 9.863770e-52 | -8.615850e-47 |
| Msa0079110 | Msa0476460 | 0.808829 | 2.555300e-50 | -8.615850e-47 |
| Msa0079130 | Msa0476460 | 0.801935 | 7.120904e-49 | -8.615850e-47 |
| Msa0079180 | Msa0476460 | 0.809713 | 1.651469e-50 | -8.615850e-47 |
| Msa0081650 | Msa0476460 | 0.820512 | 6.597029e-53 | -8.615850e-47 |
| Msa0086420 | Msa0476460 | 0.808282 | 3.343086e-50 | -8.615850e-47 |
| Msa0090570 | Msa0476460 | 0.800389 | 1.474503e-48 | -8.615850e-47 |
| Msa0096980 | Msa0476460 | 0.804422 | 2.176941e-49 | -8.615850e-47 |
| Msa0104230 | Msa0476460 | 0.803166 | 3.969130e-49 | -8.615850e-47 |
| Msa0104800 | Msa0476460 | 0.814263 | 1.684269e-51 | -8.615850e-47 |
| Msa0112770 | Msa0476460 | 0.807524 | 4.846869e-50 | -8.615850e-47 |
| Msa0127800 | Msa0476460 | 0.820868 | 5.464251e-53 | -8.615850e-47 |
| Msa0138020 | Msa0476460 | 0.827664 | 1.380627e-54 | -8.615850e-47 |
| Msa0140860 | Msa0476460 | 0.809088 | 2.249431e-50 | -8.615850e-47 |
| Msa0145010 | Msa0476460 | 0.803388 | 3.570538e-49 | -8.615850e-47 |
| Msa0150820 | Msa0476460 | 0.802180 | 6.339817e-49 | -8.615850e-47 |
| Msa0204960 | Msa0476460 | 0.801293 | 9.641297e-49 | -8.615850e-47 |
| Msa0206010 | Msa0476460 | 0.809691 | 1.669584e-50 | -8.615850e-47 |
| Msa0217680 | Msa0476460 | 0.819845 | 9.374765e-53 | -8.615850e-47 |
| Msa0376910 | Msa0476460 | 0.823544 | 1.307908e-53 | -8.615850e-47 |
| Msa0385490 | Msa0476460 | 0.809984 | 1.444150e-50 | -8.615850e-47 |
| Msa0388950 | Msa0476460 | 0.813176 | 2.922703e-51 | -8.615850e-47 |
| Msa0412840 | Msa0476460 | 0.811266 | 7.629419e-51 | -8.615850e-47 |
| Msa0429020 | Msa0476460 | 0.818715 | 1.696113e-52 | -8.615850e-47 |
| Msa0431340 | Msa0476460 | 0.937052 | 6.473785e-98 | -8.615850e-47 |
| Msa0433360 | Msa0476460 | 0.801297 | 9.624142e-49 | -8.615850e-47 |
| Msa0452710 | Msa0476460 | 0.820101 | 8.193535e-53 | -8.615850e-47 |
| Msa0453690 | Msa0476460 | 0.816802 | 4.583138e-52 | -8.615850e-47 |
| Msa0471900 | Msa0476460 | 0.821992 | 3.005995e-53 | -8.615850e-47 |
| Msa0476460 | Msa0484780 | 0.817555 | 3.103848e-52 | -8.615850e-47 |
| Msa0476460 | Msa0518170 | 0.803377 | 3.588291e-49 | -8.615850e-47 |
| Msa0476460 | Msa0518380 | 0.816619 | 5.036276e-52 | -8.615850e-47 |
| Msa0476460 | Msa0542290 | 0.802901 | 4.501850e-49 | -8.615850e-47 |
| Msa0476460 | Msa0547160 | 0.800873 | 1.174940e-48 | -8.615850e-47 |
| Msa0476460 | Msa0556060 | 0.803588 | 3.244569e-49 | -8.615850e-47 |
| Msa0476460 | Msa0562440 | 0.810368 | 1.193382e-50 | -8.615850e-47 |
| Msa0476460 | Msa0585960 | 0.800838 | 1.194210e-48 | -8.615850e-47 |
| Msa0476460 | Msa0608160 | 0.805677 | 1.189371e-49 | -8.615850e-47 |
| Msa0476460 | Msa0648080 | 0.811617 | 6.400440e-51 | -8.615850e-47 |
| Msa0476460 | Msa0709160 | 0.806675 | 7.330596e-50 | -8.615850e-47 |
| Msa0476460 | Msa0711100 | 0.818588 | 1.812567e-52 | -8.615850e-47 |
| Msa0476460 | Msa0721280 | 0.836424 | 9.434723e-57 | -8.615850e-47 |
| Msa0476460 | Msa0729510 | 0.802428 | 5.637266e-49 | -8.615850e-47 |
| Msa0476460 | Msa0763890 | 0.808660 | 2.776614e-50 | -8.615850e-47 |
| Msa0476460 | Msa0763920 | 0.807987 | 3.864117e-50 | -8.615850e-47 |
| Msa0476460 | Msa0773590 | 0.800826 | 1.200923e-48 | -8.615850e-47 |
| Msa0476460 | Msa0777230 | 0.800249 | 1.574578e-48 | -8.615850e-47 |
| Msa0476460 | Msa0784380 | 0.800401 | 1.466485e-48 | -8.615850e-47 |
| Msa0476460 | Msa0817460 | 0.823595 | 1.272837e-53 | -8.615850e-47 |
| Msa0476460 | Msa0820850 | 0.807829 | 4.174856e-50 | -8.615850e-47 |
| Msa0476460 | Msa0832150 | 0.821447 | 4.018076e-53 | -8.615850e-47 |
| Msa0476460 | Msa0832340 | 0.819810 | 9.549010e-53 | -8.615850e-47 |
| Msa0476460 | Msa0844110 | 0.806074 | 9.814836e-50 | -8.615850e-47 |
| Msa0476460 | Msa0844230 | 0.804977 | 1.667290e-49 | -8.615850e-47 |
| Msa0476460 | Msa0849030 | 0.801843 | 7.435587e-49 | -8.615850e-47 |
| Msa0476460 | Msa0857640 | 0.801323 | 9.507569e-49 | -8.615850e-47 |
| Msa0476460 | Msa0861130 | 0.811854 | 5.685389e-51 | -8.615850e-47 |
| Msa0476460 | Msa0861540 | 0.826821 | 2.198078e-54 | -8.615850e-47 |
| Msa0476460 | Msa0869120 | 0.810324 | 1.219830e-50 | -8.615850e-47 |
| Msa0476460 | Msa0880810 | 0.804395 | 2.205446e-49 | -8.615850e-47 |
| Msa0476460 | Msa0897080 | 0.824160 | 9.380316e-54 | -8.615850e-47 |
| Msa0476460 | Msa0962840 | 0.811958 | 5.396085e-51 | -8.615850e-47 |
| Msa0476460 | Msa0974630 | 0.803119 | 4.058955e-49 | -8.615850e-47 |
| Msa0476460 | Msa0980880 | 0.810607 | 1.059853e-50 | -8.615850e-47 |
| Msa0476460 | Msa0990580 | 0.809246 | 2.080267e-50 | -8.615850e-47 |
| Msa0476460 | Msa0994370 | 0.800554 | 1.365152e-48 | -8.615850e-47 |
| Msa0476460 | Msa1001390 | 0.800541 | 1.373013e-48 | -8.615850e-47 |
| Msa0476460 | Msa1002850 | 0.830626 | 2.641114e-55 | -8.615850e-47 |
| Msa0476460 | Msa1026640 | 0.804268 | 2.343923e-49 | -8.615850e-47 |
| Msa0476460 | Msa1042660 | 0.801823 | 7.506348e-49 | -8.615850e-47 |
| Msa0476460 | Msa1063420 | 0.801497 | 8.755547e-49 | -8.615850e-47 |
| Msa0476460 | Msa1063510 | 0.803671 | 3.118575e-49 | -8.615850e-47 |
| Msa0476460 | Msa1080270 | 0.804105 | 2.533725e-49 | -8.615850e-47 |
| Msa0476460 | Msa1082500 | 0.805388 | 1.367479e-49 | -8.615850e-47 |
| Msa0476460 | Msa1089320 | 0.819031 | 1.438000e-52 | -8.615850e-47 |
| Msa0476460 | Msa1098420 | 0.812670 | 3.771875e-51 | -8.615850e-47 |
| Msa0476460 | Msa1109680 | 0.826130 | 3.210971e-54 | -8.615850e-47 |
| Msa0476460 | Msa1150710 | 0.804746 | 1.862710e-49 | -8.615850e-47 |
| Msa0476460 | Msa1174040 | 0.808185 | 3.506019e-50 | -8.615850e-47 |
| Msa0476460 | Msa1193290 | 0.805747 | 1.149684e-49 | -8.615850e-47 |
| Msa0476460 | Msa1201560 | 0.808567 | 2.906266e-50 | -8.615850e-47 |
| Msa0476460 | Msa1204530 | 0.813584 | 2.377125e-51 | -8.615850e-47 |
| Msa0476460 | Msa1218580 | 0.804994 | 1.653796e-49 | -8.615850e-47 |
| Msa0476460 | Msa1221050 | 0.824972 | 6.041799e-54 | -8.615850e-47 |
| Msa0476460 | Msa1228590 | 0.801325 | 9.496013e-49 | -8.615850e-47 |
| Msa0476460 | Msa1257130 | 0.809522 | 1.815521e-50 | -8.615850e-47 |
| Msa0476460 | Msa1270660 | 0.803490 | 3.401131e-49 | -8.615850e-47 |
| Msa0476460 | Msa1276440 | 0.806115 | 9.622725e-50 | -8.615850e-47 |
| Msa0476460 | Msa1294070 | 0.801779 | 7.664409e-49 | -8.615850e-47 |
| Msa0476460 | Msa1305710 | 0.803101 | 4.092999e-49 | -8.615850e-47 |
| Msa0476460 | Msa1313140 | 0.814134 | 1.798489e-51 | -8.615850e-47 |
| Msa0476460 | Msa1331000 | 0.811872 | 5.633980e-51 | -8.615850e-47 |
| Msa0476460 | Msa1331320 | 0.807775 | 4.287278e-50 | -8.615850e-47 |
| Msa0476460 | Msa1342900 | 0.802504 | 5.437276e-49 | -8.615850e-47 |
| Msa0476460 | Msa1353470 | 0.831347 | 1.757545e-55 | -8.615850e-47 |
| Msa0476460 | Msa1353980 | 0.803387 | 3.572158e-49 | -8.615850e-47 |
| Msa0476460 | Msa1357890 | 0.837195 | 5.998174e-57 | -8.615850e-47 |
| Msa0476460 | Msa1364210 | 0.819581 | 1.077380e-52 | -8.615850e-47 |
| Msa0476460 | Msa1389880 | 0.800103 | 1.685866e-48 | -8.615850e-47 |
| Msa0476460 | Msa1397120 | 0.814336 | 1.623032e-51 | -8.615850e-47 |
| Msa0476460 | Msa1398090 | 0.832575 | 8.742382e-56 | -8.615850e-47 |
| Msa0476460 | Msa1403890 | 0.811973 | 5.353890e-51 | -8.615850e-47 |
| Msa0476460 | Msa1423870 | 0.807586 | 4.702096e-50 | -8.615850e-47 |
| Msa0476460 | Msa1424450 | 0.813387 | 2.625878e-51 | -8.615850e-47 |
| Msa0476460 | Msa1428780 | 0.817652 | 2.950444e-52 | -8.615850e-47 |
| Msa0476460 | Msa1436600 | 0.800633 | 1.315395e-48 | -8.615850e-47 |
| Msa0476460 | Msa1451160 | 0.807618 | 4.628148e-50 | -8.615850e-47 |
| Msa0476460 | Msa1460050 | 0.804595 | 2.003043e-49 | -8.615850e-47 |
| Msa0476460 | Msa1462290 | 0.838952 | 2.117841e-57 | -8.615850e-47 |
| Msa0476460 | Msa1462930 | 0.805515 | 1.286064e-49 | -8.615850e-47 |
| Msa0476460 | Msa1463900 | 0.810741 | 9.911213e-51 | -8.615850e-47 |
| Msa0257500 | Msa0476460 | 0.814189 | 1.748519e-51 | -8.615850e-47 |
| Msa0271530 | Msa0476460 | 0.804989 | 1.657102e-49 | -8.615850e-47 |
| Msa0287410 | Msa0476460 | 0.827032 | 1.956835e-54 | -8.615850e-47 |
| Msa0291500 | Msa0476460 | 0.810349 | 1.204692e-50 | -8.615850e-47 |
| Msa0296790 | Msa0476460 | 0.801275 | 9.721757e-49 | -8.615850e-47 |
| Msa0319170 | Msa0476460 | 0.801855 | 7.393517e-49 | -8.615850e-47 |
| Msa0326110 | Msa0476460 | 0.819296 | 1.251448e-52 | -8.615850e-47 |
| Msa0334360 | Msa0476460 | 0.818261 | 2.149616e-52 | -8.615850e-47 |
| Msa0359030 | Msa0476460 | 0.810679 | 1.022618e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476460 | MtrunA17_Chr3g0135501 | 61.404 | 57 | 20 | 1 | 34 | 88 | 40 | 96 | 1.32e-18 | 73.2 |
| Msa0476460 | MtrunA17_Chr3g0135561 | 78.049 | 41 | 9 | 0 | 48 | 88 | 1 | 41 | 1.33e-17 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 28 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATAGTTTGTTGGTTAAT+TGG | 0.245238 | 3_3:-80280345 | Msa0476460:three_prime_UTR |
| AAAACTCAGGAGTATTTATA+TGG | 0.263955 | 3_3:-80280452 | Msa0476460:three_prime_UTR |
| CGCACCGACGCCATGTGTTC+TGG | 0.294485 | 3_3:+80281631 | None:intergenic |
| TACATGTATGATCTGGTAAT+TGG | 0.303038 | 3_3:-80280411 | Msa0476460:three_prime_UTR |
| GCGTTGGATTTCTTGCTGAT+AGG | 0.335101 | 3_3:-80280510 | Msa0476460:CDS |
| GCTATACTTGGTATAAAATA+CGG | 0.377678 | 3_3:-80280576 | Msa0476460:CDS |
| CGTTGGATTTCTTGCTGATA+GGG | 0.388507 | 3_3:-80280509 | Msa0476460:CDS |
| GTGGTTCCTGCTTATATATC+TGG | 0.400542 | 3_3:-80280216 | Msa0476460:three_prime_UTR |
| TTCTTCTGAATTTCAAATGA+AGG | 0.404122 | 3_3:+80280244 | None:intergenic |
| TTCTACTATCATTGAGAGAT+AGG | 0.426549 | 3_3:+80280190 | None:intergenic |
| AATGTATTACTCTTAAGTTC+AGG | 0.440995 | 3_3:-80280479 | Msa0476460:exon |
| GTTACGTTACATGTATGATC+TGG | 0.464100 | 3_3:-80280418 | Msa0476460:three_prime_UTR |
| CAGCGAGAAGAAGGAGAAGC+AGG | 0.477619 | 3_3:+80281663 | None:intergenic |
| TGTATGGATTGATAGTTTGT+TGG | 0.489686 | 3_3:-80280353 | Msa0476460:three_prime_UTR |
| ACGCCATGTGTTCTGGAAAA+CGG | 0.498836 | 3_3:+80281638 | None:intergenic |
| CTATACTTGGTATAAAATAC+GGG | 0.523048 | 3_3:-80280575 | Msa0476460:CDS |
| AAAACGGTGCAGCGAGAAGA+AGG | 0.524493 | 3_3:+80281654 | None:intergenic |
| TGTCCGACAAAAGCTATACT+TGG | 0.542972 | 3_3:-80280588 | Msa0476460:CDS |
| GAAATTCAGAAGAATAGAAG+TGG | 0.552531 | 3_3:-80280235 | Msa0476460:three_prime_UTR |
| AGGATACCAGATATATAAGC+AGG | 0.559112 | 3_3:+80280210 | None:intergenic |
| GCTATAGTAGTCACGGGCGT+TGG | 0.571195 | 3_3:-80280526 | Msa0476460:CDS |
| AAGTTCAGGTTACAAAACTC+AGG | 0.571396 | 3_3:-80280465 | Msa0476460:three_prime_UTR |
| GTCGGTGCGACAGATATTGA+AGG | 0.600333 | 3_3:-80281617 | Msa0476460:intron |
| AAACCACGCTATAGTAGTCA+CGG | 0.605546 | 3_3:-80280533 | Msa0476460:CDS |
| AACCACGCTATAGTAGTCAC+GGG | 0.623391 | 3_3:-80280532 | Msa0476460:CDS |
| GCGTTGTGTGTTGTTGAAGA+CGG | 0.626298 | 3_3:+80281685 | None:intergenic |
| TGTGTGTTGTTGAAGACGGA+CGG | 0.635413 | 3_3:+80281689 | None:intergenic |
| CGCCCGTGACTACTATAGCG+TGG | 0.702785 | 3_3:+80280530 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTAAAAGACTTTA+AGG | - | chr3_3:80282370-80282389 | Msa0476460:intron | 10.0% |
| !!! | TATATTTTAAAAGACTTTAA+GGG | - | chr3_3:80282371-80282390 | Msa0476460:intron | 10.0% |
| !!! | TAGTCTTTTAAAAAAAATTA+GGG | + | chr3_3:80282473-80282492 | None:intergenic | 10.0% |
| !!! | TTAGTCTTTTAAAAAAAATT+AGG | + | chr3_3:80282474-80282493 | None:intergenic | 10.0% |
| !!! | ATTTCTTTTTAATTGTTTAT+AGG | - | chr3_3:80283827-80283846 | Msa0476460:intron | 10.0% |
| !!! | ATATATTTTAAAAGACTTTA+AGG | - | chr3_3:80282370-80282389 | Msa0476460:intron | 10.0% |
| !!! | TATATTTTAAAAGACTTTAA+GGG | - | chr3_3:80282371-80282390 | Msa0476460:intron | 10.0% |
| !!! | TAGTCTTTTAAAAAAAATTA+GGG | + | chr3_3:80282473-80282492 | None:intergenic | 10.0% |
| !!! | TTAGTCTTTTAAAAAAAATT+AGG | + | chr3_3:80282474-80282493 | None:intergenic | 10.0% |
| !!! | ATTTCTTTTTAATTGTTTAT+AGG | - | chr3_3:80283827-80283846 | Msa0476460:intron | 10.0% |
| !! | TAAATAAGTAAGGATAATAT+AGG | + | chr3_3:80280391-80280410 | None:intergenic | 15.0% |
| !! | AATTAGATATTGAATGAATA+AGG | - | chr3_3:80280433-80280452 | Msa0476460:three_prime_UTR | 15.0% |
| !! | CAAAAAAAAGACAATTAAAA+AGG | - | chr3_3:80280534-80280553 | Msa0476460:CDS | 15.0% |
| !! | AATTCAAAATCAAAGATTTA+GGG | - | chr3_3:80280874-80280893 | Msa0476460:intron | 15.0% |
| !! | AGTATCTATTATAAAATTAG+AGG | - | chr3_3:80282399-80282418 | Msa0476460:intron | 15.0% |
| !! | GTATCTATTATAAAATTAGA+GGG | - | chr3_3:80282400-80282419 | Msa0476460:intron | 15.0% |
| !! | TATCTATTATAAAATTAGAG+GGG | - | chr3_3:80282401-80282420 | Msa0476460:intron | 15.0% |
| !!! | AGTCTTTTAAAAAAAATTAG+GGG | + | chr3_3:80282472-80282491 | None:intergenic | 15.0% |
| !!! | ATATTGTTAATTTTTCGTTT+TGG | - | chr3_3:80282507-80282526 | Msa0476460:intron | 15.0% |
| !! | TTTCAACAATAAACAAATTA+GGG | + | chr3_3:80283232-80283251 | None:intergenic | 15.0% |
| !! | ATTTCAACAATAAACAAATT+AGG | + | chr3_3:80283233-80283252 | None:intergenic | 15.0% |
| !! | CTAGAAAATCTTATATTATT+TGG | - | chr3_3:80283356-80283375 | Msa0476460:intron | 15.0% |
| !! | AAAATAATAGATTCAAAAGA+TGG | + | chr3_3:80283428-80283447 | None:intergenic | 15.0% |
| !!! | TAATACCAACTATTTTATTT+TGG | - | chr3_3:80283601-80283620 | Msa0476460:intron | 15.0% |
| !!! | ATAATAATTTTAGTTCTATG+TGG | - | chr3_3:80283799-80283818 | Msa0476460:intron | 15.0% |
| !! | TAAATAAGTAAGGATAATAT+AGG | + | chr3_3:80280391-80280410 | None:intergenic | 15.0% |
| !! | AATTAGATATTGAATGAATA+AGG | - | chr3_3:80280433-80280452 | Msa0476460:three_prime_UTR | 15.0% |
| !! | CAAAAAAAAGACAATTAAAA+AGG | - | chr3_3:80280534-80280553 | Msa0476460:CDS | 15.0% |
| !! | AATTCAAAATCAAAGATTTA+GGG | - | chr3_3:80280874-80280893 | Msa0476460:intron | 15.0% |
| !! | AGTATCTATTATAAAATTAG+AGG | - | chr3_3:80282399-80282418 | Msa0476460:intron | 15.0% |
| !! | GTATCTATTATAAAATTAGA+GGG | - | chr3_3:80282400-80282419 | Msa0476460:intron | 15.0% |
| !! | TATCTATTATAAAATTAGAG+GGG | - | chr3_3:80282401-80282420 | Msa0476460:intron | 15.0% |
| !!! | AGTCTTTTAAAAAAAATTAG+GGG | + | chr3_3:80282472-80282491 | None:intergenic | 15.0% |
| !!! | ATATTGTTAATTTTTCGTTT+TGG | - | chr3_3:80282507-80282526 | Msa0476460:intron | 15.0% |
| !! | TTTCAACAATAAACAAATTA+GGG | + | chr3_3:80283232-80283251 | None:intergenic | 15.0% |
| !! | ATTTCAACAATAAACAAATT+AGG | + | chr3_3:80283233-80283252 | None:intergenic | 15.0% |
| !! | CTAGAAAATCTTATATTATT+TGG | - | chr3_3:80283356-80283375 | Msa0476460:intron | 15.0% |
| !! | AAAATAATAGATTCAAAAGA+TGG | + | chr3_3:80283428-80283447 | None:intergenic | 15.0% |
| !!! | TAATACCAACTATTTTATTT+TGG | - | chr3_3:80283601-80283620 | Msa0476460:intron | 15.0% |
| !!! | ATAATAATTTTAGTTCTATG+TGG | - | chr3_3:80283799-80283818 | Msa0476460:intron | 15.0% |
| !!! | ACAGATTTTACATTAATTAG+TGG | - | chr3_3:80280251-80280270 | Msa0476460:three_prime_UTR | 20.0% |
| !! | TTATCCTTACTTATTTATTG+CGG | - | chr3_3:80280394-80280413 | Msa0476460:three_prime_UTR | 20.0% |
| !! | CAATTCAAAATCAAAGATTT+AGG | - | chr3_3:80280873-80280892 | Msa0476460:intron | 20.0% |
| !!! | AGGGATTCTTAAATATTTTT+TGG | - | chr3_3:80280893-80280912 | Msa0476460:intron | 20.0% |
| !!! | GGGATTCTTAAATATTTTTT+GGG | - | chr3_3:80280894-80280913 | Msa0476460:intron | 20.0% |
| !!! | TCTTAAATATTTTTTGGGAT+TGG | - | chr3_3:80280899-80280918 | Msa0476460:intron | 20.0% |
| !! | ATGTATATTATACTTACTGA+AGG | - | chr3_3:80281460-80281479 | Msa0476460:intron | 20.0% |
| !!! | CATATGAAACTGTTAAATTT+TGG | + | chr3_3:80281701-80281720 | None:intergenic | 20.0% |
| !!! | TTTCATTAACTTGTAATGTA+AGG | + | chr3_3:80281998-80282017 | None:intergenic | 20.0% |
| !! | TTATCTTAATATTGAGAAGA+TGG | + | chr3_3:80282076-80282095 | None:intergenic | 20.0% |
| !! | CACAAATTTATGGAAAAATA+GGG | + | chr3_3:80283290-80283309 | None:intergenic | 20.0% |
| !! | ACACAAATTTATGGAAAAAT+AGG | + | chr3_3:80283291-80283310 | None:intergenic | 20.0% |
| !!! | TTTGATAATCTAAAAACCTT+TGG | - | chr3_3:80283527-80283546 | Msa0476460:intron | 20.0% |
| !! | TTAATACAACGTAAGATAAT+TGG | + | chr3_3:80283584-80283603 | None:intergenic | 20.0% |
| !! | GTAATCCAAAATAAAATAGT+TGG | + | chr3_3:80283609-80283628 | None:intergenic | 20.0% |
| !! | TGCAAAATATATATTGTAGA+GGG | + | chr3_3:80283775-80283794 | None:intergenic | 20.0% |
| !! | ATGCAAAATATATATTGTAG+AGG | + | chr3_3:80283776-80283795 | None:intergenic | 20.0% |
| !!! | ACAGATTTTACATTAATTAG+TGG | - | chr3_3:80280251-80280270 | Msa0476460:three_prime_UTR | 20.0% |
| !! | TTATCCTTACTTATTTATTG+CGG | - | chr3_3:80280394-80280413 | Msa0476460:three_prime_UTR | 20.0% |
| !! | CAATTCAAAATCAAAGATTT+AGG | - | chr3_3:80280873-80280892 | Msa0476460:intron | 20.0% |
| !!! | AGGGATTCTTAAATATTTTT+TGG | - | chr3_3:80280893-80280912 | Msa0476460:intron | 20.0% |
| !!! | GGGATTCTTAAATATTTTTT+GGG | - | chr3_3:80280894-80280913 | Msa0476460:intron | 20.0% |
| !!! | TCTTAAATATTTTTTGGGAT+TGG | - | chr3_3:80280899-80280918 | Msa0476460:intron | 20.0% |
| !! | ATGTATATTATACTTACTGA+AGG | - | chr3_3:80281460-80281479 | Msa0476460:intron | 20.0% |
| !!! | CATATGAAACTGTTAAATTT+TGG | + | chr3_3:80281701-80281720 | None:intergenic | 20.0% |
| !!! | TTTCATTAACTTGTAATGTA+AGG | + | chr3_3:80281998-80282017 | None:intergenic | 20.0% |
| !! | TTATCTTAATATTGAGAAGA+TGG | + | chr3_3:80282076-80282095 | None:intergenic | 20.0% |
| !! | CACAAATTTATGGAAAAATA+GGG | + | chr3_3:80283290-80283309 | None:intergenic | 20.0% |
| !! | ACACAAATTTATGGAAAAAT+AGG | + | chr3_3:80283291-80283310 | None:intergenic | 20.0% |
| !!! | TTTGATAATCTAAAAACCTT+TGG | - | chr3_3:80283527-80283546 | Msa0476460:intron | 20.0% |
| !! | TTAATACAACGTAAGATAAT+TGG | + | chr3_3:80283584-80283603 | None:intergenic | 20.0% |
| !! | GTAATCCAAAATAAAATAGT+TGG | + | chr3_3:80283609-80283628 | None:intergenic | 20.0% |
| !! | TGCAAAATATATATTGTAGA+GGG | + | chr3_3:80283775-80283794 | None:intergenic | 20.0% |
| !! | ATGCAAAATATATATTGTAG+AGG | + | chr3_3:80283776-80283795 | None:intergenic | 20.0% |
| ! | AAGAGACACTTAAAAAGAAA+CGG | + | chr3_3:80280300-80280319 | None:intergenic | 25.0% |
| ! | GTAACATTTATTGAATGTCT+TGG | - | chr3_3:80280497-80280516 | Msa0476460:CDS | 25.0% |
| ! | CAAGAATGTTCTTAATTCTT+TGG | + | chr3_3:80280848-80280867 | None:intergenic | 25.0% |
| !!! | TAAATATTTTTTGGGATTGG+AGG | - | chr3_3:80280902-80280921 | Msa0476460:intron | 25.0% |
| !! | ATGAAACTGTTAAATTTTGG+AGG | + | chr3_3:80281698-80281717 | None:intergenic | 25.0% |
| ! | TCACTTGTAAACTCTATATA+AGG | - | chr3_3:80281964-80281983 | Msa0476460:intron | 25.0% |
| ! | AGTGTTAACCTAAAAACAAA+CGG | - | chr3_3:80282323-80282342 | Msa0476460:intron | 25.0% |
| !!! | ATTTTAAAAGACTTTAAGGG+AGG | - | chr3_3:80282374-80282393 | Msa0476460:intron | 25.0% |
| ! | TTCCTTCAAAAAATAGTTGA+AGG | - | chr3_3:80282563-80282582 | Msa0476460:intron | 25.0% |
| !!! | TTCCTTCAACTATTTTTTGA+AGG | + | chr3_3:80282568-80282587 | None:intergenic | 25.0% |
| !! | TTTTACAAAAGCCAAAATAC+CGG | + | chr3_3:80282641-80282660 | None:intergenic | 25.0% |
| ! | AACTGAATGTTAAAATGAAG+TGG | + | chr3_3:80282708-80282727 | None:intergenic | 25.0% |
| !! | TGAATCATTTTCTTAGATCT+AGG | - | chr3_3:80282866-80282885 | Msa0476460:intron | 25.0% |
| !! | GAATCATTTTCTTAGATCTA+GGG | - | chr3_3:80282867-80282886 | Msa0476460:intron | 25.0% |
| !! | TGAATCATTTTCTTAGATCT+AGG | - | chr3_3:80282866-80282885 | Msa0476460:intron | 25.0% |
| !! | GAATCATTTTCTTAGATCTA+GGG | - | chr3_3:80282867-80282886 | Msa0476460:intron | 25.0% |
| ! | AAAATGTCTCAACTAATTGA+CGG | + | chr3_3:80283114-80283133 | None:intergenic | 25.0% |
| ! | AAAATGTCTCAACTAATTGA+CGG | + | chr3_3:80283114-80283133 | None:intergenic | 25.0% |
| ! | ATAGAGCTTACACAAATTTA+TGG | + | chr3_3:80283300-80283319 | None:intergenic | 25.0% |
| !!! | CATGTTTGTATTTTGAGTTA+CGG | - | chr3_3:80283379-80283398 | Msa0476460:intron | 25.0% |
| !!! | GGTTTTTAGATTATCAAAAC+AGG | + | chr3_3:80283525-80283544 | None:intergenic | 25.0% |
| ! | AAATTCTTGCAAATTTCCAA+AGG | + | chr3_3:80283546-80283565 | None:intergenic | 25.0% |
| !! | TTTTATCAAGCAACAGAAAA+TGG | - | chr3_3:80283677-80283696 | Msa0476460:intron | 25.0% |
| ! | GCTATACTTGGTATAAAATA+CGG | - | chr3_3:80283867-80283886 | Msa0476460:intron | 25.0% |
| ! | CTATACTTGGTATAAAATAC+GGG | - | chr3_3:80283868-80283887 | Msa0476460:intron | 25.0% |
| ! | AATGTATTACTCTTAAGTTC+AGG | - | chr3_3:80283964-80283983 | Msa0476460:intron | 25.0% |
| !!! | AAAACTCAGGAGTATTTATA+TGG | - | chr3_3:80283991-80284010 | Msa0476460:intron | 25.0% |
| !! | TGTATCTTGACTTTTATGTA+TGG | - | chr3_3:80284074-80284093 | Msa0476460:intron | 25.0% |
| !!! | TTGATAGTTTGTTGGTTAAT+TGG | - | chr3_3:80284098-80284117 | Msa0476460:intron | 25.0% |
| !! | GTCTACGTGATTTATATTTT+AGG | + | chr3_3:80284132-80284151 | None:intergenic | 25.0% |
| ! | TTCTTCTGAATTTCAAATGA+AGG | + | chr3_3:80284202-80284221 | None:intergenic | 25.0% |
| ! | AAGAGACACTTAAAAAGAAA+CGG | + | chr3_3:80280300-80280319 | None:intergenic | 25.0% |
| ! | GTAACATTTATTGAATGTCT+TGG | - | chr3_3:80280497-80280516 | Msa0476460:CDS | 25.0% |
| ! | CAAGAATGTTCTTAATTCTT+TGG | + | chr3_3:80280848-80280867 | None:intergenic | 25.0% |
| !!! | TAAATATTTTTTGGGATTGG+AGG | - | chr3_3:80280902-80280921 | Msa0476460:intron | 25.0% |
| !! | ATGAAACTGTTAAATTTTGG+AGG | + | chr3_3:80281698-80281717 | None:intergenic | 25.0% |
| ! | TCACTTGTAAACTCTATATA+AGG | - | chr3_3:80281964-80281983 | Msa0476460:intron | 25.0% |
| ! | AGTGTTAACCTAAAAACAAA+CGG | - | chr3_3:80282323-80282342 | Msa0476460:intron | 25.0% |
| !!! | ATTTTAAAAGACTTTAAGGG+AGG | - | chr3_3:80282374-80282393 | Msa0476460:intron | 25.0% |
| ! | TTCCTTCAAAAAATAGTTGA+AGG | - | chr3_3:80282563-80282582 | Msa0476460:intron | 25.0% |
| !!! | TTCCTTCAACTATTTTTTGA+AGG | + | chr3_3:80282568-80282587 | None:intergenic | 25.0% |
| !! | TTTTACAAAAGCCAAAATAC+CGG | + | chr3_3:80282641-80282660 | None:intergenic | 25.0% |
| ! | AACTGAATGTTAAAATGAAG+TGG | + | chr3_3:80282708-80282727 | None:intergenic | 25.0% |
| !! | TGAATCATTTTCTTAGATCT+AGG | - | chr3_3:80282866-80282885 | Msa0476460:intron | 25.0% |
| !! | GAATCATTTTCTTAGATCTA+GGG | - | chr3_3:80282867-80282886 | Msa0476460:intron | 25.0% |
| !! | TGAATCATTTTCTTAGATCT+AGG | - | chr3_3:80282866-80282885 | Msa0476460:intron | 25.0% |
| !! | GAATCATTTTCTTAGATCTA+GGG | - | chr3_3:80282867-80282886 | Msa0476460:intron | 25.0% |
| ! | AAAATGTCTCAACTAATTGA+CGG | + | chr3_3:80283114-80283133 | None:intergenic | 25.0% |
| ! | AAAATGTCTCAACTAATTGA+CGG | + | chr3_3:80283114-80283133 | None:intergenic | 25.0% |
| ! | ATAGAGCTTACACAAATTTA+TGG | + | chr3_3:80283300-80283319 | None:intergenic | 25.0% |
| !!! | CATGTTTGTATTTTGAGTTA+CGG | - | chr3_3:80283379-80283398 | Msa0476460:intron | 25.0% |
| !!! | GGTTTTTAGATTATCAAAAC+AGG | + | chr3_3:80283525-80283544 | None:intergenic | 25.0% |
| ! | AAATTCTTGCAAATTTCCAA+AGG | + | chr3_3:80283546-80283565 | None:intergenic | 25.0% |
| !! | TTTTATCAAGCAACAGAAAA+TGG | - | chr3_3:80283677-80283696 | Msa0476460:intron | 25.0% |
| ! | GCTATACTTGGTATAAAATA+CGG | - | chr3_3:80283867-80283886 | Msa0476460:intron | 25.0% |
| ! | CTATACTTGGTATAAAATAC+GGG | - | chr3_3:80283868-80283887 | Msa0476460:intron | 25.0% |
| ! | AATGTATTACTCTTAAGTTC+AGG | - | chr3_3:80283964-80283983 | Msa0476460:intron | 25.0% |
| !!! | AAAACTCAGGAGTATTTATA+TGG | - | chr3_3:80283991-80284010 | Msa0476460:intron | 25.0% |
| !! | TGTATCTTGACTTTTATGTA+TGG | - | chr3_3:80284074-80284093 | Msa0476460:intron | 25.0% |
| !!! | TTGATAGTTTGTTGGTTAAT+TGG | - | chr3_3:80284098-80284117 | Msa0476460:intron | 25.0% |
| !! | GTCTACGTGATTTATATTTT+AGG | + | chr3_3:80284132-80284151 | None:intergenic | 25.0% |
| ! | TTCTTCTGAATTTCAAATGA+AGG | + | chr3_3:80284202-80284221 | None:intergenic | 25.0% |
| TATTTGATGTCAGCTAGATA+AGG | + | chr3_3:80280225-80280244 | None:intergenic | 30.0% | |
| AGACAATTAAAAAGGAACAG+AGG | - | chr3_3:80280542-80280561 | Msa0476460:CDS | 30.0% | |
| ! | GAACAGAGGTAGTATTATTT+TGG | - | chr3_3:80280556-80280575 | Msa0476460:CDS | 30.0% |
| ! | TATTTTTCTTTGTGCTTAGC+GGG | + | chr3_3:80280589-80280608 | None:intergenic | 30.0% |
| ! | GTATTTTTCTTTGTGCTTAG+CGG | + | chr3_3:80280590-80280609 | None:intergenic | 30.0% |
| AATAGATGCAATAGCAAGAA+GGG | + | chr3_3:80280652-80280671 | None:intergenic | 30.0% | |
| CTATTGCATCTATTCACAAT+TGG | - | chr3_3:80280658-80280677 | Msa0476460:intron | 30.0% | |
| ! | AAGTATTGTTCACATCTAGT+TGG | + | chr3_3:80280692-80280711 | None:intergenic | 30.0% |
| ! | AATACTTTTCTACTAGCTGA+AGG | - | chr3_3:80280705-80280724 | Msa0476460:intron | 30.0% |
| TGAAATAGAGATTCCTTCTT+TGG | + | chr3_3:80280937-80280956 | None:intergenic | 30.0% | |
| ! | AATTTGACTGAAGTGTCTAA+AGG | + | chr3_3:80281026-80281045 | None:intergenic | 30.0% |
| !! | TACTGGTTTATGTTTCTTTC+TGG | - | chr3_3:80281334-80281353 | Msa0476460:intron | 30.0% |
| ! | ACTGGTTTATGTTTCTTTCT+GGG | - | chr3_3:80281335-80281354 | Msa0476460:intron | 30.0% |
| AGTCAGAGAAAAATTGCATA+AGG | - | chr3_3:80281604-80281623 | Msa0476460:intron | 30.0% | |
| GTCAGAGAAAAATTGCATAA+GGG | - | chr3_3:80281605-80281624 | Msa0476460:intron | 30.0% | |
| !! | AAACTGTTAAATTTTGGAGG+TGG | + | chr3_3:80281695-80281714 | None:intergenic | 30.0% |
| TAACAGTTTCATATGCAAGT+TGG | - | chr3_3:80281706-80281725 | Msa0476460:CDS | 30.0% | |
| AACAGTTTCATATGCAAGTT+GGG | - | chr3_3:80281707-80281726 | Msa0476460:CDS | 30.0% | |
| ATCTAGTGTAGATTAGTACA+TGG | - | chr3_3:80281924-80281943 | Msa0476460:intron | 30.0% | |
| ! | TAATATTGAGAAGATGGACT+TGG | + | chr3_3:80282070-80282089 | None:intergenic | 30.0% |
| !! | ACTTAACACCGTTTGTTTTT+AGG | + | chr3_3:80282334-80282353 | None:intergenic | 30.0% |
| !!! | ACAAACGGTGTTAAGTTTTT+TGG | - | chr3_3:80282338-80282357 | Msa0476460:intron | 30.0% |
| AATATTTATAGGGACTAACC+CGG | - | chr3_3:80282619-80282638 | Msa0476460:intron | 30.0% | |
| TTTACAAAAGCCAAAATACC+GGG | + | chr3_3:80282640-80282659 | None:intergenic | 30.0% | |
| CGGAGAATTAGGATATATAA+CGG | + | chr3_3:80283094-80283113 | None:intergenic | 30.0% | |
| !! | TGTGTTGTGATTTTAACACA+TGG | - | chr3_3:80283459-80283478 | Msa0476460:intron | 30.0% |
| ! | ATACCAAGTATAGCTTTTGT+CGG | + | chr3_3:80283861-80283880 | None:intergenic | 30.0% |
| TACATGTATGATCTGGTAAT+TGG | - | chr3_3:80284032-80284051 | Msa0476460:intron | 30.0% | |
| ! | TGTATGGATTGATAGTTTGT+TGG | - | chr3_3:80284090-80284109 | Msa0476460:intron | 30.0% |
| GAAATTCAGAAGAATAGAAG+TGG | - | chr3_3:80284208-80284227 | Msa0476460:intron | 30.0% | |
| TTCTACTATCATTGAGAGAT+AGG | + | chr3_3:80284256-80284275 | None:intergenic | 30.0% | |
| TATTTGATGTCAGCTAGATA+AGG | + | chr3_3:80280225-80280244 | None:intergenic | 30.0% | |
| AGACAATTAAAAAGGAACAG+AGG | - | chr3_3:80280542-80280561 | Msa0476460:CDS | 30.0% | |
| ! | GAACAGAGGTAGTATTATTT+TGG | - | chr3_3:80280556-80280575 | Msa0476460:CDS | 30.0% |
| ! | TATTTTTCTTTGTGCTTAGC+GGG | + | chr3_3:80280589-80280608 | None:intergenic | 30.0% |
| ! | GTATTTTTCTTTGTGCTTAG+CGG | + | chr3_3:80280590-80280609 | None:intergenic | 30.0% |
| AATAGATGCAATAGCAAGAA+GGG | + | chr3_3:80280652-80280671 | None:intergenic | 30.0% | |
| CTATTGCATCTATTCACAAT+TGG | - | chr3_3:80280658-80280677 | Msa0476460:intron | 30.0% | |
| ! | AAGTATTGTTCACATCTAGT+TGG | + | chr3_3:80280692-80280711 | None:intergenic | 30.0% |
| ! | AATACTTTTCTACTAGCTGA+AGG | - | chr3_3:80280705-80280724 | Msa0476460:intron | 30.0% |
| TGAAATAGAGATTCCTTCTT+TGG | + | chr3_3:80280937-80280956 | None:intergenic | 30.0% | |
| ! | AATTTGACTGAAGTGTCTAA+AGG | + | chr3_3:80281026-80281045 | None:intergenic | 30.0% |
| !! | TACTGGTTTATGTTTCTTTC+TGG | - | chr3_3:80281334-80281353 | Msa0476460:intron | 30.0% |
| ! | ACTGGTTTATGTTTCTTTCT+GGG | - | chr3_3:80281335-80281354 | Msa0476460:intron | 30.0% |
| AGTCAGAGAAAAATTGCATA+AGG | - | chr3_3:80281604-80281623 | Msa0476460:intron | 30.0% | |
| GTCAGAGAAAAATTGCATAA+GGG | - | chr3_3:80281605-80281624 | Msa0476460:intron | 30.0% | |
| !! | AAACTGTTAAATTTTGGAGG+TGG | + | chr3_3:80281695-80281714 | None:intergenic | 30.0% |
| TAACAGTTTCATATGCAAGT+TGG | - | chr3_3:80281706-80281725 | Msa0476460:CDS | 30.0% | |
| AACAGTTTCATATGCAAGTT+GGG | - | chr3_3:80281707-80281726 | Msa0476460:CDS | 30.0% | |
| ATCTAGTGTAGATTAGTACA+TGG | - | chr3_3:80281924-80281943 | Msa0476460:intron | 30.0% | |
| ! | TAATATTGAGAAGATGGACT+TGG | + | chr3_3:80282070-80282089 | None:intergenic | 30.0% |
| !! | ACTTAACACCGTTTGTTTTT+AGG | + | chr3_3:80282334-80282353 | None:intergenic | 30.0% |
| !!! | ACAAACGGTGTTAAGTTTTT+TGG | - | chr3_3:80282338-80282357 | Msa0476460:intron | 30.0% |
| AATATTTATAGGGACTAACC+CGG | - | chr3_3:80282619-80282638 | Msa0476460:intron | 30.0% | |
| TTTACAAAAGCCAAAATACC+GGG | + | chr3_3:80282640-80282659 | None:intergenic | 30.0% | |
| CGGAGAATTAGGATATATAA+CGG | + | chr3_3:80283094-80283113 | None:intergenic | 30.0% | |
| !! | TGTGTTGTGATTTTAACACA+TGG | - | chr3_3:80283459-80283478 | Msa0476460:intron | 30.0% |
| ! | ATACCAAGTATAGCTTTTGT+CGG | + | chr3_3:80283861-80283880 | None:intergenic | 30.0% |
| TACATGTATGATCTGGTAAT+TGG | - | chr3_3:80284032-80284051 | Msa0476460:intron | 30.0% | |
| ! | TGTATGGATTGATAGTTTGT+TGG | - | chr3_3:80284090-80284109 | Msa0476460:intron | 30.0% |
| GAAATTCAGAAGAATAGAAG+TGG | - | chr3_3:80284208-80284227 | Msa0476460:intron | 30.0% | |
| TTCTACTATCATTGAGAGAT+AGG | + | chr3_3:80284256-80284275 | None:intergenic | 30.0% | |
| GATAAGGTCCATGAAATGAA+AGG | + | chr3_3:80280209-80280228 | None:intergenic | 35.0% | |
| GACACTTAAAAAGAAACGGA+GGG | + | chr3_3:80280296-80280315 | None:intergenic | 35.0% | |
| AGACACTTAAAAAGAAACGG+AGG | + | chr3_3:80280297-80280316 | None:intergenic | 35.0% | |
| CTCTCCGCAATAAATAAGTA+AGG | + | chr3_3:80280401-80280420 | None:intergenic | 35.0% | |
| TACTTATTTATTGCGGAGAG+AGG | - | chr3_3:80280401-80280420 | Msa0476460:three_prime_UTR | 35.0% | |
| AGAAATAACTGACTACTGCA+AGG | - | chr3_3:80280625-80280644 | Msa0476460:intron | 35.0% | |
| GAATAGATGCAATAGCAAGA+AGG | + | chr3_3:80280653-80280672 | None:intergenic | 35.0% | |
| ! | TCTTTGTTTACCCTTCAACA+TGG | - | chr3_3:80280753-80280772 | Msa0476460:intron | 35.0% |
| GAAATCACTTCCATGTTGAA+GGG | + | chr3_3:80280766-80280785 | None:intergenic | 35.0% | |
| TGAAATCACTTCCATGTTGA+AGG | + | chr3_3:80280767-80280786 | None:intergenic | 35.0% | |
| CTGATGAATCAAGCAAATCA+AGG | + | chr3_3:80280974-80280993 | None:intergenic | 35.0% | |
| !! | CTTGATTTGCTTGATTCATC+AGG | - | chr3_3:80280972-80280991 | Msa0476460:intron | 35.0% |
| ! | CTTGATTCATCAGGTCTTTT+AGG | - | chr3_3:80280981-80281000 | Msa0476460:intron | 35.0% |
| TAGCAAGACACATCTGTAAA+AGG | + | chr3_3:80281068-80281087 | None:intergenic | 35.0% | |
| TTTGTGCTTCTGACTTTCTT+GGG | + | chr3_3:80281259-80281278 | None:intergenic | 35.0% | |
| ATTTGTGCTTCTGACTTTCT+TGG | + | chr3_3:80281260-80281279 | None:intergenic | 35.0% | |
| ! | AAGTCAGAAGCACAAATCTT+AGG | - | chr3_3:80281263-80281282 | Msa0476460:intron | 35.0% |
| TAGGTTATGTTGATGCAGAT+TGG | - | chr3_3:80281282-80281301 | Msa0476460:intron | 35.0% | |
| AGGTTATGTTGATGCAGATT+GGG | - | chr3_3:80281283-80281302 | Msa0476460:intron | 35.0% | |
| ! | TTCTGAAGAGGACCTTAAAA+TGG | + | chr3_3:80281399-80281418 | None:intergenic | 35.0% |
| CTCTTCAGAAGCTGAATATA+GGG | - | chr3_3:80281409-80281428 | Msa0476460:intron | 35.0% | |
| GCTTGACACACTTGATATTA+AGG | + | chr3_3:80281487-80281506 | None:intergenic | 35.0% | |
| GGATTGGATGTTATGTGAAT+GGG | + | chr3_3:80281539-80281558 | None:intergenic | 35.0% | |
| ! | TGGATTGGATGTTATGTGAA+TGG | + | chr3_3:80281540-80281559 | None:intergenic | 35.0% |
| !! | CAAGGTGTTTTGTTCTTTCA+TGG | + | chr3_3:80281568-80281587 | None:intergenic | 35.0% |
| ! | GCAATTTTTCTCTGACTAGA+TGG | + | chr3_3:80281601-80281620 | None:intergenic | 35.0% |
| AGCTGCTCATTAGTTGAAAT+GGG | + | chr3_3:80281647-80281666 | None:intergenic | 35.0% | |
| ! | TATATCATGCTCTAGCTTGT+AGG | - | chr3_3:80281741-80281760 | Msa0476460:intron | 35.0% |
| ACTTGTGTTGCAAGTTATTG+AGG | + | chr3_3:80281840-80281859 | None:intergenic | 35.0% | |
| !!! | ACGGTGTTAAGTTTTTTGGA+AGG | - | chr3_3:80282342-80282361 | Msa0476460:intron | 35.0% |
| GTTGTTTGAACAAACCTCAA+AGG | - | chr3_3:80282431-80282450 | Msa0476460:intron | 35.0% | |
| AATTACACTAACCTCCTTTG+AGG | + | chr3_3:80282448-80282467 | None:intergenic | 35.0% | |
| GTTAAAATGAAGTGGAGTGT+GGG | + | chr3_3:80282700-80282719 | None:intergenic | 35.0% | |
| TGTTAAAATGAAGTGGAGTG+TGG | + | chr3_3:80282701-80282720 | None:intergenic | 35.0% | |
| ! | TCTTAGATCTAGGGTTTGTA+CGG | - | chr3_3:80282876-80282895 | Msa0476460:intron | 35.0% |
| ! | TCTTAGATCTAGGGTTTGTA+CGG | - | chr3_3:80282876-80282895 | Msa0476460:intron | 35.0% |
| !! | GGATATATAACGGATCGAAA+CGG | + | chr3_3:80283084-80283103 | None:intergenic | 35.0% |
| CAACTAATTGACGGAGAATT+AGG | + | chr3_3:80283105-80283124 | None:intergenic | 35.0% | |
| !!! | GTTTGTATTTTGAGTTACGG+TGG | - | chr3_3:80283382-80283401 | Msa0476460:intron | 35.0% |
| ! | ATTTTGGATTACAGATTCCG+AGG | - | chr3_3:80283617-80283636 | Msa0476460:intron | 35.0% |
| ! | TTTTGGATTACAGATTCCGA+GGG | - | chr3_3:80283618-80283637 | Msa0476460:intron | 35.0% |
| TGTAAAAAACATGCCCGAAT+TGG | + | chr3_3:80283653-80283672 | None:intergenic | 35.0% | |
| !!! | ATTCGGGCATGTTTTTTACA+CGG | - | chr3_3:80283653-80283672 | Msa0476460:intron | 35.0% |
| ! | AAGTTCAGGTTACAAAACTC+AGG | - | chr3_3:80283978-80283997 | Msa0476460:intron | 35.0% |
| GTTACGTTACATGTATGATC+TGG | - | chr3_3:80284025-80284044 | Msa0476460:intron | 35.0% | |
| AGGATACCAGATATATAAGC+AGG | + | chr3_3:80284236-80284255 | None:intergenic | 35.0% | |
| GATAAGGTCCATGAAATGAA+AGG | + | chr3_3:80280209-80280228 | None:intergenic | 35.0% | |
| GACACTTAAAAAGAAACGGA+GGG | + | chr3_3:80280296-80280315 | None:intergenic | 35.0% | |
| AGACACTTAAAAAGAAACGG+AGG | + | chr3_3:80280297-80280316 | None:intergenic | 35.0% | |
| CTCTCCGCAATAAATAAGTA+AGG | + | chr3_3:80280401-80280420 | None:intergenic | 35.0% | |
| TACTTATTTATTGCGGAGAG+AGG | - | chr3_3:80280401-80280420 | Msa0476460:three_prime_UTR | 35.0% | |
| AGAAATAACTGACTACTGCA+AGG | - | chr3_3:80280625-80280644 | Msa0476460:intron | 35.0% | |
| GAATAGATGCAATAGCAAGA+AGG | + | chr3_3:80280653-80280672 | None:intergenic | 35.0% | |
| ! | TCTTTGTTTACCCTTCAACA+TGG | - | chr3_3:80280753-80280772 | Msa0476460:intron | 35.0% |
| GAAATCACTTCCATGTTGAA+GGG | + | chr3_3:80280766-80280785 | None:intergenic | 35.0% | |
| TGAAATCACTTCCATGTTGA+AGG | + | chr3_3:80280767-80280786 | None:intergenic | 35.0% | |
| CTGATGAATCAAGCAAATCA+AGG | + | chr3_3:80280974-80280993 | None:intergenic | 35.0% | |
| !! | CTTGATTTGCTTGATTCATC+AGG | - | chr3_3:80280972-80280991 | Msa0476460:intron | 35.0% |
| ! | CTTGATTCATCAGGTCTTTT+AGG | - | chr3_3:80280981-80281000 | Msa0476460:intron | 35.0% |
| TAGCAAGACACATCTGTAAA+AGG | + | chr3_3:80281068-80281087 | None:intergenic | 35.0% | |
| TTTGTGCTTCTGACTTTCTT+GGG | + | chr3_3:80281259-80281278 | None:intergenic | 35.0% | |
| ATTTGTGCTTCTGACTTTCT+TGG | + | chr3_3:80281260-80281279 | None:intergenic | 35.0% | |
| ! | AAGTCAGAAGCACAAATCTT+AGG | - | chr3_3:80281263-80281282 | Msa0476460:intron | 35.0% |
| TAGGTTATGTTGATGCAGAT+TGG | - | chr3_3:80281282-80281301 | Msa0476460:intron | 35.0% | |
| AGGTTATGTTGATGCAGATT+GGG | - | chr3_3:80281283-80281302 | Msa0476460:intron | 35.0% | |
| ! | TTCTGAAGAGGACCTTAAAA+TGG | + | chr3_3:80281399-80281418 | None:intergenic | 35.0% |
| CTCTTCAGAAGCTGAATATA+GGG | - | chr3_3:80281409-80281428 | Msa0476460:intron | 35.0% | |
| GCTTGACACACTTGATATTA+AGG | + | chr3_3:80281487-80281506 | None:intergenic | 35.0% | |
| GGATTGGATGTTATGTGAAT+GGG | + | chr3_3:80281539-80281558 | None:intergenic | 35.0% | |
| ! | TGGATTGGATGTTATGTGAA+TGG | + | chr3_3:80281540-80281559 | None:intergenic | 35.0% |
| !! | CAAGGTGTTTTGTTCTTTCA+TGG | + | chr3_3:80281568-80281587 | None:intergenic | 35.0% |
| ! | GCAATTTTTCTCTGACTAGA+TGG | + | chr3_3:80281601-80281620 | None:intergenic | 35.0% |
| AGCTGCTCATTAGTTGAAAT+GGG | + | chr3_3:80281647-80281666 | None:intergenic | 35.0% | |
| ! | TATATCATGCTCTAGCTTGT+AGG | - | chr3_3:80281741-80281760 | Msa0476460:intron | 35.0% |
| ACTTGTGTTGCAAGTTATTG+AGG | + | chr3_3:80281840-80281859 | None:intergenic | 35.0% | |
| !!! | ACGGTGTTAAGTTTTTTGGA+AGG | - | chr3_3:80282342-80282361 | Msa0476460:intron | 35.0% |
| GTTGTTTGAACAAACCTCAA+AGG | - | chr3_3:80282431-80282450 | Msa0476460:intron | 35.0% | |
| AATTACACTAACCTCCTTTG+AGG | + | chr3_3:80282448-80282467 | None:intergenic | 35.0% | |
| GTTAAAATGAAGTGGAGTGT+GGG | + | chr3_3:80282700-80282719 | None:intergenic | 35.0% | |
| TGTTAAAATGAAGTGGAGTG+TGG | + | chr3_3:80282701-80282720 | None:intergenic | 35.0% | |
| ! | TCTTAGATCTAGGGTTTGTA+CGG | - | chr3_3:80282876-80282895 | Msa0476460:intron | 35.0% |
| ! | TCTTAGATCTAGGGTTTGTA+CGG | - | chr3_3:80282876-80282895 | Msa0476460:intron | 35.0% |
| !! | GGATATATAACGGATCGAAA+CGG | + | chr3_3:80283084-80283103 | None:intergenic | 35.0% |
| CAACTAATTGACGGAGAATT+AGG | + | chr3_3:80283105-80283124 | None:intergenic | 35.0% | |
| !!! | GTTTGTATTTTGAGTTACGG+TGG | - | chr3_3:80283382-80283401 | Msa0476460:intron | 35.0% |
| ! | ATTTTGGATTACAGATTCCG+AGG | - | chr3_3:80283617-80283636 | Msa0476460:intron | 35.0% |
| ! | TTTTGGATTACAGATTCCGA+GGG | - | chr3_3:80283618-80283637 | Msa0476460:intron | 35.0% |
| TGTAAAAAACATGCCCGAAT+TGG | + | chr3_3:80283653-80283672 | None:intergenic | 35.0% | |
| !!! | ATTCGGGCATGTTTTTTACA+CGG | - | chr3_3:80283653-80283672 | Msa0476460:intron | 35.0% |
| ! | AAGTTCAGGTTACAAAACTC+AGG | - | chr3_3:80283978-80283997 | Msa0476460:intron | 35.0% |
| GTTACGTTACATGTATGATC+TGG | - | chr3_3:80284025-80284044 | Msa0476460:intron | 35.0% | |
| AGGATACCAGATATATAAGC+AGG | + | chr3_3:80284236-80284255 | None:intergenic | 35.0% | |
| TGAGGAGACCTTTCATTTCA+TGG | - | chr3_3:80280198-80280217 | Msa0476460:three_prime_UTR | 40.0% | |
| ACGGAGGGAGTAATAAAAGA+AGG | + | chr3_3:80280281-80280300 | None:intergenic | 40.0% | |
| CACAACACTTCTAGTGTATG+CGG | - | chr3_3:80280785-80280804 | Msa0476460:intron | 40.0% | |
| GCGGATGACATTATATTAGC+TGG | - | chr3_3:80280804-80280823 | Msa0476460:intron | 40.0% | |
| TTACAGATGTGTCTTGCTAC+AGG | - | chr3_3:80281069-80281088 | Msa0476460:intron | 40.0% | |
| TGAGTGGCTAGTGAAATATC+AGG | + | chr3_3:80281134-80281153 | None:intergenic | 40.0% | |
| ! | AAACTGGCTCAATTGTTGAG+TGG | + | chr3_3:80281150-80281169 | None:intergenic | 40.0% |
| GCTTTGTAGTGAGTAGTAGT+GGG | + | chr3_3:80281182-80281201 | None:intergenic | 40.0% | |
| ! | AGCTTTGTAGTGAGTAGTAG+TGG | + | chr3_3:80281183-80281202 | None:intergenic | 40.0% |
| AGATACCTAAAAAACGCTCC+TGG | - | chr3_3:80281218-80281237 | Msa0476460:intron | 40.0% | |
| GATACAAGAAGGTCAACTAC+TGG | - | chr3_3:80281317-80281336 | Msa0476460:intron | 40.0% | |
| ! | AGAAGCAGCCAACCATTTTA+AGG | - | chr3_3:80281384-80281403 | Msa0476460:intron | 40.0% |
| GAAGAGGACCTTAAAATGGT+TGG | + | chr3_3:80281395-80281414 | None:intergenic | 40.0% | |
| ! | CCTATATTCAGCTTCTGAAG+AGG | + | chr3_3:80281411-80281430 | None:intergenic | 40.0% |
| CCTCTTCAGAAGCTGAATAT+AGG | - | chr3_3:80281408-80281427 | Msa0476460:intron | 40.0% | |
| TGACTATCACAGTCAAGAAC+TGG | + | chr3_3:80281512-80281531 | None:intergenic | 40.0% | |
| TTTGTTCTTTCATGGAGGAC+TGG | + | chr3_3:80281560-80281579 | None:intergenic | 40.0% | |
| !! | GGTGTTTTGTTCTTTCATGG+AGG | + | chr3_3:80281565-80281584 | None:intergenic | 40.0% |
| CTAGATGGCAATCAATCTCA+AGG | + | chr3_3:80281586-80281605 | None:intergenic | 40.0% | |
| CAGCTGCTCATTAGTTGAAA+TGG | + | chr3_3:80281648-80281667 | None:intergenic | 40.0% | |
| CATTTCAACTAATGAGCAGC+TGG | - | chr3_3:80281646-80281665 | Msa0476460:CDS | 40.0% | |
| TGAAGCCACCAAATTTGATG+CGG | - | chr3_3:80282172-80282191 | Msa0476460:intron | 40.0% | |
| TGTGTTTGCCGCATCAAATT+TGG | + | chr3_3:80282183-80282202 | None:intergenic | 40.0% | |
| TTTGCCTCTGGTACTGTTAT+CGG | + | chr3_3:80282246-80282265 | None:intergenic | 40.0% | |
| TCTTTCGATTTCTTTGCCTC+TGG | + | chr3_3:80282258-80282277 | None:intergenic | 40.0% | |
| ATCGAAAGACCTTCACATGA+AGG | - | chr3_3:80282269-80282288 | Msa0476460:intron | 40.0% | |
| GTTTGAACAAACCTCAAAGG+AGG | - | chr3_3:80282434-80282453 | Msa0476460:intron | 40.0% | |
| !! | GGTGCGTTGGCTTATATAAT+AGG | + | chr3_3:80282671-80282690 | None:intergenic | 40.0% |
| TGTCCGACAAAAGCTATACT+TGG | - | chr3_3:80283855-80283874 | Msa0476460:intron | 40.0% | |
| AAACCACGCTATAGTAGTCA+CGG | - | chr3_3:80283910-80283929 | Msa0476460:intron | 40.0% | |
| CGTTGGATTTCTTGCTGATA+GGG | - | chr3_3:80283934-80283953 | Msa0476460:intron | 40.0% | |
| GTGGTTCCTGCTTATATATC+TGG | - | chr3_3:80284227-80284246 | Msa0476460:intron | 40.0% | |
| TGAGGAGACCTTTCATTTCA+TGG | - | chr3_3:80280198-80280217 | Msa0476460:three_prime_UTR | 40.0% | |
| ACGGAGGGAGTAATAAAAGA+AGG | + | chr3_3:80280281-80280300 | None:intergenic | 40.0% | |
| CACAACACTTCTAGTGTATG+CGG | - | chr3_3:80280785-80280804 | Msa0476460:intron | 40.0% | |
| GCGGATGACATTATATTAGC+TGG | - | chr3_3:80280804-80280823 | Msa0476460:intron | 40.0% | |
| TTACAGATGTGTCTTGCTAC+AGG | - | chr3_3:80281069-80281088 | Msa0476460:intron | 40.0% | |
| TGAGTGGCTAGTGAAATATC+AGG | + | chr3_3:80281134-80281153 | None:intergenic | 40.0% | |
| ! | AAACTGGCTCAATTGTTGAG+TGG | + | chr3_3:80281150-80281169 | None:intergenic | 40.0% |
| GCTTTGTAGTGAGTAGTAGT+GGG | + | chr3_3:80281182-80281201 | None:intergenic | 40.0% | |
| ! | AGCTTTGTAGTGAGTAGTAG+TGG | + | chr3_3:80281183-80281202 | None:intergenic | 40.0% |
| AGATACCTAAAAAACGCTCC+TGG | - | chr3_3:80281218-80281237 | Msa0476460:intron | 40.0% | |
| GATACAAGAAGGTCAACTAC+TGG | - | chr3_3:80281317-80281336 | Msa0476460:intron | 40.0% | |
| ! | AGAAGCAGCCAACCATTTTA+AGG | - | chr3_3:80281384-80281403 | Msa0476460:intron | 40.0% |
| GAAGAGGACCTTAAAATGGT+TGG | + | chr3_3:80281395-80281414 | None:intergenic | 40.0% | |
| ! | CCTATATTCAGCTTCTGAAG+AGG | + | chr3_3:80281411-80281430 | None:intergenic | 40.0% |
| CCTCTTCAGAAGCTGAATAT+AGG | - | chr3_3:80281408-80281427 | Msa0476460:intron | 40.0% | |
| TGACTATCACAGTCAAGAAC+TGG | + | chr3_3:80281512-80281531 | None:intergenic | 40.0% | |
| TTTGTTCTTTCATGGAGGAC+TGG | + | chr3_3:80281560-80281579 | None:intergenic | 40.0% | |
| !! | GGTGTTTTGTTCTTTCATGG+AGG | + | chr3_3:80281565-80281584 | None:intergenic | 40.0% |
| CTAGATGGCAATCAATCTCA+AGG | + | chr3_3:80281586-80281605 | None:intergenic | 40.0% | |
| CAGCTGCTCATTAGTTGAAA+TGG | + | chr3_3:80281648-80281667 | None:intergenic | 40.0% | |
| CATTTCAACTAATGAGCAGC+TGG | - | chr3_3:80281646-80281665 | Msa0476460:CDS | 40.0% | |
| TGAAGCCACCAAATTTGATG+CGG | - | chr3_3:80282172-80282191 | Msa0476460:intron | 40.0% | |
| TGTGTTTGCCGCATCAAATT+TGG | + | chr3_3:80282183-80282202 | None:intergenic | 40.0% | |
| TTTGCCTCTGGTACTGTTAT+CGG | + | chr3_3:80282246-80282265 | None:intergenic | 40.0% | |
| TCTTTCGATTTCTTTGCCTC+TGG | + | chr3_3:80282258-80282277 | None:intergenic | 40.0% | |
| ATCGAAAGACCTTCACATGA+AGG | - | chr3_3:80282269-80282288 | Msa0476460:intron | 40.0% | |
| GTTTGAACAAACCTCAAAGG+AGG | - | chr3_3:80282434-80282453 | Msa0476460:intron | 40.0% | |
| !! | GGTGCGTTGGCTTATATAAT+AGG | + | chr3_3:80282671-80282690 | None:intergenic | 40.0% |
| TGTCCGACAAAAGCTATACT+TGG | - | chr3_3:80283855-80283874 | Msa0476460:intron | 40.0% | |
| AAACCACGCTATAGTAGTCA+CGG | - | chr3_3:80283910-80283929 | Msa0476460:intron | 40.0% | |
| CGTTGGATTTCTTGCTGATA+GGG | - | chr3_3:80283934-80283953 | Msa0476460:intron | 40.0% | |
| GTGGTTCCTGCTTATATATC+TGG | - | chr3_3:80284227-80284246 | Msa0476460:intron | 40.0% | |
| GAGGTAGCTCATTCCAAAGA+AGG | - | chr3_3:80280921-80280940 | Msa0476460:intron | 45.0% | |
| ! | TAAAGGTGTAAGAGCAGGCT+TGG | + | chr3_3:80281009-80281028 | None:intergenic | 45.0% |
| ! | GTGTCTAAAGGTGTAAGAGC+AGG | + | chr3_3:80281014-80281033 | None:intergenic | 45.0% |
| TCTTGCTACAGGAGGCTTAT+TGG | - | chr3_3:80281080-80281099 | Msa0476460:intron | 45.0% | |
| !! | TAGTGGGAGCATTGAGAAAC+TGG | + | chr3_3:80281166-80281185 | None:intergenic | 45.0% |
| !!! | CAAGACCAGGAGCGTTTTTT+AGG | + | chr3_3:80281226-80281245 | None:intergenic | 45.0% |
| CTAAAAAACGCTCCTGGTCT+TGG | - | chr3_3:80281224-80281243 | Msa0476460:intron | 45.0% | |
| TATGTTGATGCAGATTGGGC+AGG | - | chr3_3:80281287-80281306 | Msa0476460:intron | 45.0% | |
| CAGGTTGTGTGGATACAAGA+AGG | - | chr3_3:80281306-80281325 | Msa0476460:intron | 45.0% | |
| TGGGCTCTTCACTCATATCT+TGG | - | chr3_3:80281354-80281373 | Msa0476460:intron | 45.0% | |
| TCTTTCATGGAGGACTGGAT+TGG | + | chr3_3:80281555-80281574 | None:intergenic | 45.0% | |
| !!! | TTTTGGAGGTGGAAGTGCTT+TGG | + | chr3_3:80281684-80281703 | None:intergenic | 45.0% |
| ! | ATCATGCTCTAGCTTGTAGG+AGG | - | chr3_3:80281744-80281763 | Msa0476460:intron | 45.0% |
| GTTTGCCGCATCAAATTTGG+TGG | + | chr3_3:80282180-80282199 | None:intergenic | 45.0% | |
| GAAAGACCTTCACATGAAGG+TGG | - | chr3_3:80282272-80282291 | Msa0476460:intron | 45.0% | |
| ! | TAGGGACTAACCCGGTATTT+TGG | - | chr3_3:80282627-80282646 | Msa0476460:intron | 45.0% |
| ! | TGTGTGTTGTTGAAGACGGA+CGG | + | chr3_3:80282757-80282776 | None:intergenic | 45.0% |
| ! | GCGTTGTGTGTTGTTGAAGA+CGG | + | chr3_3:80282761-80282780 | None:intergenic | 45.0% |
| !! | ACGCCATGTGTTCTGGAAAA+CGG | + | chr3_3:80282808-80282827 | None:intergenic | 45.0% |
| ! | TTTTCCAGAACACATGGCGT+CGG | - | chr3_3:80282808-80282827 | Msa0476460:intron | 45.0% |
| GAATTGGTAGATGACACCCT+CGG | + | chr3_3:80283637-80283656 | None:intergenic | 45.0% | |
| !! | GAGGGTGTCATCTACCAATT+CGG | - | chr3_3:80283636-80283655 | Msa0476460:intron | 45.0% |
| ! | AGGGTGTCATCTACCAATTC+GGG | - | chr3_3:80283637-80283656 | Msa0476460:intron | 45.0% |
| AACCACGCTATAGTAGTCAC+GGG | - | chr3_3:80283911-80283930 | Msa0476460:intron | 45.0% | |
| GCGTTGGATTTCTTGCTGAT+AGG | - | chr3_3:80283933-80283952 | Msa0476460:intron | 45.0% | |
| GAGGTAGCTCATTCCAAAGA+AGG | - | chr3_3:80280921-80280940 | Msa0476460:intron | 45.0% | |
| ! | TAAAGGTGTAAGAGCAGGCT+TGG | + | chr3_3:80281009-80281028 | None:intergenic | 45.0% |
| ! | GTGTCTAAAGGTGTAAGAGC+AGG | + | chr3_3:80281014-80281033 | None:intergenic | 45.0% |
| TCTTGCTACAGGAGGCTTAT+TGG | - | chr3_3:80281080-80281099 | Msa0476460:intron | 45.0% | |
| !! | TAGTGGGAGCATTGAGAAAC+TGG | + | chr3_3:80281166-80281185 | None:intergenic | 45.0% |
| !!! | CAAGACCAGGAGCGTTTTTT+AGG | + | chr3_3:80281226-80281245 | None:intergenic | 45.0% |
| CTAAAAAACGCTCCTGGTCT+TGG | - | chr3_3:80281224-80281243 | Msa0476460:intron | 45.0% | |
| TATGTTGATGCAGATTGGGC+AGG | - | chr3_3:80281287-80281306 | Msa0476460:intron | 45.0% | |
| CAGGTTGTGTGGATACAAGA+AGG | - | chr3_3:80281306-80281325 | Msa0476460:intron | 45.0% | |
| TGGGCTCTTCACTCATATCT+TGG | - | chr3_3:80281354-80281373 | Msa0476460:intron | 45.0% | |
| TCTTTCATGGAGGACTGGAT+TGG | + | chr3_3:80281555-80281574 | None:intergenic | 45.0% | |
| !!! | TTTTGGAGGTGGAAGTGCTT+TGG | + | chr3_3:80281684-80281703 | None:intergenic | 45.0% |
| ! | ATCATGCTCTAGCTTGTAGG+AGG | - | chr3_3:80281744-80281763 | Msa0476460:intron | 45.0% |
| GTTTGCCGCATCAAATTTGG+TGG | + | chr3_3:80282180-80282199 | None:intergenic | 45.0% | |
| GAAAGACCTTCACATGAAGG+TGG | - | chr3_3:80282272-80282291 | Msa0476460:intron | 45.0% | |
| ! | TAGGGACTAACCCGGTATTT+TGG | - | chr3_3:80282627-80282646 | Msa0476460:intron | 45.0% |
| ! | TGTGTGTTGTTGAAGACGGA+CGG | + | chr3_3:80282757-80282776 | None:intergenic | 45.0% |
| ! | GCGTTGTGTGTTGTTGAAGA+CGG | + | chr3_3:80282761-80282780 | None:intergenic | 45.0% |
| !! | ACGCCATGTGTTCTGGAAAA+CGG | + | chr3_3:80282808-80282827 | None:intergenic | 45.0% |
| ! | TTTTCCAGAACACATGGCGT+CGG | - | chr3_3:80282808-80282827 | Msa0476460:intron | 45.0% |
| GAATTGGTAGATGACACCCT+CGG | + | chr3_3:80283637-80283656 | None:intergenic | 45.0% | |
| !! | GAGGGTGTCATCTACCAATT+CGG | - | chr3_3:80283636-80283655 | Msa0476460:intron | 45.0% |
| ! | AGGGTGTCATCTACCAATTC+GGG | - | chr3_3:80283637-80283656 | Msa0476460:intron | 45.0% |
| AACCACGCTATAGTAGTCAC+GGG | - | chr3_3:80283911-80283930 | Msa0476460:intron | 45.0% | |
| GCGTTGGATTTCTTGCTGAT+AGG | - | chr3_3:80283933-80283952 | Msa0476460:intron | 45.0% | |
| !! | AAAAAATTAACAATATTTAT+AGG | - | chr3_3:80282608-80282627 | Msa0476460:intron | 5.0% |
| !! | AAAAATTAACAATATTTATA+GGG | - | chr3_3:80282609-80282628 | Msa0476460:intron | 5.0% |
| !!! | TTTTAACAATAAAAAAATTA+GGG | + | chr3_3:80283142-80283161 | None:intergenic | 5.0% |
| !!! | ATTTTAACAATAAAAAAATT+AGG | + | chr3_3:80283143-80283162 | None:intergenic | 5.0% |
| !! | AAAAAATTAACAATATTTAT+AGG | - | chr3_3:80282608-80282627 | Msa0476460:intron | 5.0% |
| !! | AAAAATTAACAATATTTATA+GGG | - | chr3_3:80282609-80282628 | Msa0476460:intron | 5.0% |
| !!! | TTTTAACAATAAAAAAATTA+GGG | + | chr3_3:80283142-80283161 | None:intergenic | 5.0% |
| !!! | ATTTTAACAATAAAAAAATT+AGG | + | chr3_3:80283143-80283162 | None:intergenic | 5.0% |
| CAGATGTGTCTTGCTACAGG+AGG | - | chr3_3:80281072-80281091 | Msa0476460:intron | 50.0% | |
| GGGAATAGAAGACCAAGACC+AGG | + | chr3_3:80281239-80281258 | None:intergenic | 50.0% | |
| ACCACTCTCTTGCTCACGAT+AGG | - | chr3_3:80282096-80282115 | Msa0476460:intron | 50.0% | |
| CCACTCTCTTGCTCACGATA+GGG | - | chr3_3:80282097-80282116 | Msa0476460:intron | 50.0% | |
| CACTCTCTTGCTCACGATAG+GGG | - | chr3_3:80282098-80282117 | Msa0476460:intron | 50.0% | |
| ACTCTCTTGCTCACGATAGG+GGG | - | chr3_3:80282099-80282118 | Msa0476460:intron | 50.0% | |
| GATGCCGATAACAGTACCAG+AGG | - | chr3_3:80282239-80282258 | Msa0476460:intron | 50.0% | |
| AGACCTTCACATGAAGGTGG+AGG | - | chr3_3:80282275-80282294 | Msa0476460:intron | 50.0% | |
| GACCTTCACATGAAGGTGGA+GGG | - | chr3_3:80282276-80282295 | Msa0476460:intron | 50.0% | |
| GAAGTGGAGTGTGGGCTTAT+GGG | + | chr3_3:80282692-80282711 | None:intergenic | 50.0% | |
| TGAAGTGGAGTGTGGGCTTA+TGG | + | chr3_3:80282693-80282712 | None:intergenic | 50.0% | |
| AAAACGGTGCAGCGAGAAGA+AGG | + | chr3_3:80282792-80282811 | None:intergenic | 50.0% | |
| ! | GCACCGTTTTCCAGAACACA+TGG | - | chr3_3:80282802-80282821 | Msa0476460:intron | 50.0% |
| GTCGGTGCGACAGATATTGA+AGG | - | chr3_3:80282826-80282845 | Msa0476460:intron | 50.0% | |
| CAGATGTGTCTTGCTACAGG+AGG | - | chr3_3:80281072-80281091 | Msa0476460:intron | 50.0% | |
| GGGAATAGAAGACCAAGACC+AGG | + | chr3_3:80281239-80281258 | None:intergenic | 50.0% | |
| ACCACTCTCTTGCTCACGAT+AGG | - | chr3_3:80282096-80282115 | Msa0476460:intron | 50.0% | |
| CCACTCTCTTGCTCACGATA+GGG | - | chr3_3:80282097-80282116 | Msa0476460:intron | 50.0% | |
| CACTCTCTTGCTCACGATAG+GGG | - | chr3_3:80282098-80282117 | Msa0476460:intron | 50.0% | |
| ACTCTCTTGCTCACGATAGG+GGG | - | chr3_3:80282099-80282118 | Msa0476460:intron | 50.0% | |
| GATGCCGATAACAGTACCAG+AGG | - | chr3_3:80282239-80282258 | Msa0476460:intron | 50.0% | |
| AGACCTTCACATGAAGGTGG+AGG | - | chr3_3:80282275-80282294 | Msa0476460:intron | 50.0% | |
| GACCTTCACATGAAGGTGGA+GGG | - | chr3_3:80282276-80282295 | Msa0476460:intron | 50.0% | |
| GAAGTGGAGTGTGGGCTTAT+GGG | + | chr3_3:80282692-80282711 | None:intergenic | 50.0% | |
| TGAAGTGGAGTGTGGGCTTA+TGG | + | chr3_3:80282693-80282712 | None:intergenic | 50.0% | |
| AAAACGGTGCAGCGAGAAGA+AGG | + | chr3_3:80282792-80282811 | None:intergenic | 50.0% | |
| ! | GCACCGTTTTCCAGAACACA+TGG | - | chr3_3:80282802-80282821 | Msa0476460:intron | 50.0% |
| GTCGGTGCGACAGATATTGA+AGG | - | chr3_3:80282826-80282845 | Msa0476460:intron | 50.0% | |
| TGCAGATTGGGCAGGTTGTG+TGG | - | chr3_3:80281295-80281314 | Msa0476460:intron | 55.0% | |
| CCCTATCGTGAGCAAGAGAG+TGG | + | chr3_3:80282100-80282119 | None:intergenic | 55.0% | |
| CTCTCTTGCTCACGATAGGG+GGG | - | chr3_3:80282100-80282119 | Msa0476460:intron | 55.0% | |
| TCTCTTGCTCACGATAGGGG+GGG | - | chr3_3:80282101-80282120 | Msa0476460:intron | 55.0% | |
| GTCCCTCCACCTTCATGTGA+AGG | + | chr3_3:80282281-80282300 | None:intergenic | 55.0% | |
| CAGCGAGAAGAAGGAGAAGC+AGG | + | chr3_3:80282783-80282802 | None:intergenic | 55.0% | |
| GCTATAGTAGTCACGGGCGT+TGG | - | chr3_3:80283917-80283936 | Msa0476460:intron | 55.0% | |
| TGCAGATTGGGCAGGTTGTG+TGG | - | chr3_3:80281295-80281314 | Msa0476460:intron | 55.0% | |
| CCCTATCGTGAGCAAGAGAG+TGG | + | chr3_3:80282100-80282119 | None:intergenic | 55.0% | |
| CTCTCTTGCTCACGATAGGG+GGG | - | chr3_3:80282100-80282119 | Msa0476460:intron | 55.0% | |
| TCTCTTGCTCACGATAGGGG+GGG | - | chr3_3:80282101-80282120 | Msa0476460:intron | 55.0% | |
| GTCCCTCCACCTTCATGTGA+AGG | + | chr3_3:80282281-80282300 | None:intergenic | 55.0% | |
| CAGCGAGAAGAAGGAGAAGC+AGG | + | chr3_3:80282783-80282802 | None:intergenic | 55.0% | |
| GCTATAGTAGTCACGGGCGT+TGG | - | chr3_3:80283917-80283936 | Msa0476460:intron | 55.0% | |
| CTCTTGCTCACGATAGGGGG+GGG | - | chr3_3:80282102-80282121 | Msa0476460:intron | 60.0% | |
| TCTTGCTCACGATAGGGGGG+GGG | - | chr3_3:80282103-80282122 | Msa0476460:intron | 60.0% | |
| CACATGAAGGTGGAGGGACG+TGG | - | chr3_3:80282282-80282301 | Msa0476460:intron | 60.0% | |
| GTGTGGGCTTATGGGTGCGT+TGG | + | chr3_3:80282684-80282703 | None:intergenic | 60.0% | |
| CGCCCGTGACTACTATAGCG+TGG | + | chr3_3:80283916-80283935 | None:intergenic | 60.0% | |
| CTCTTGCTCACGATAGGGGG+GGG | - | chr3_3:80282102-80282121 | Msa0476460:intron | 60.0% | |
| TCTTGCTCACGATAGGGGGG+GGG | - | chr3_3:80282103-80282122 | Msa0476460:intron | 60.0% | |
| CACATGAAGGTGGAGGGACG+TGG | - | chr3_3:80282282-80282301 | Msa0476460:intron | 60.0% | |
| GTGTGGGCTTATGGGTGCGT+TGG | + | chr3_3:80282684-80282703 | None:intergenic | 60.0% | |
| CGCCCGTGACTACTATAGCG+TGG | + | chr3_3:80283916-80283935 | None:intergenic | 60.0% | |
| CTTGCTCACGATAGGGGGGG+GGG | - | chr3_3:80282104-80282123 | Msa0476460:intron | 65.0% | |
| TTGCTCACGATAGGGGGGGG+GGG | - | chr3_3:80282105-80282124 | Msa0476460:intron | 65.0% | |
| ! | CGCACCGACGCCATGTGTTC+TGG | + | chr3_3:80282815-80282834 | None:intergenic | 65.0% |
| CTTGCTCACGATAGGGGGGG+GGG | - | chr3_3:80282104-80282123 | Msa0476460:intron | 65.0% | |
| TTGCTCACGATAGGGGGGGG+GGG | - | chr3_3:80282105-80282124 | Msa0476460:intron | 65.0% | |
| ! | CGCACCGACGCCATGTGTTC+TGG | + | chr3_3:80282815-80282834 | None:intergenic | 65.0% |
| TGCTCACGATAGGGGGGGGG+GGG | - | chr3_3:80282106-80282125 | Msa0476460:intron | 70.0% | |
| TGCTCACGATAGGGGGGGGG+GGG | - | chr3_3:80282106-80282125 | Msa0476460:intron | 70.0% | |
| GCTCACGATAGGGGGGGGGG+GGG | - | chr3_3:80282107-80282126 | Msa0476460:intron | 75.0% | |
| CTCACGATAGGGGGGGGGGG+GGG | - | chr3_3:80282108-80282127 | Msa0476460:intron | 75.0% | |
| TCACGATAGGGGGGGGGGGG+GGG | - | chr3_3:80282109-80282128 | Msa0476460:intron | 75.0% | |
| GCTCACGATAGGGGGGGGGG+GGG | - | chr3_3:80282107-80282126 | Msa0476460:intron | 75.0% | |
| CTCACGATAGGGGGGGGGGG+GGG | - | chr3_3:80282108-80282127 | Msa0476460:intron | 75.0% | |
| TCACGATAGGGGGGGGGGGG+GGG | - | chr3_3:80282109-80282128 | Msa0476460:intron | 75.0% | |
| ! | CACGATAGGGGGGGGGGGGG+GGG | - | chr3_3:80282110-80282129 | Msa0476460:intron | 80.0% |
| ! | ACGATAGGGGGGGGGGGGGG+GGG | - | chr3_3:80282111-80282130 | Msa0476460:intron | 80.0% |
| ! | CACGATAGGGGGGGGGGGGG+GGG | - | chr3_3:80282110-80282129 | Msa0476460:intron | 80.0% |
| ! | ACGATAGGGGGGGGGGGGGG+GGG | - | chr3_3:80282111-80282130 | Msa0476460:intron | 80.0% |
| ! | CGATAGGGGGGGGGGGGGGG+GGG | - | chr3_3:80282112-80282131 | Msa0476460:intron | 85.0% |
| ! | GATAGGGGGGGGGGGGGGGG+GGG | - | chr3_3:80282113-80282132 | Msa0476460:intron | 85.0% |
| ! | CGATAGGGGGGGGGGGGGGG+GGG | - | chr3_3:80282112-80282131 | Msa0476460:intron | 85.0% |
| ! | GATAGGGGGGGGGGGGGGGG+GGG | - | chr3_3:80282113-80282132 | Msa0476460:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 80280190 | 80284275 | 80280190 | ID=Msa0476460;Name=Msa0476460 |
| chr3_3 | mRNA | 80280190 | 80284275 | 80280190 | ID=Msa0476460-mRNA-1;Parent=Msa0476460;Name=Msa0476460-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.33|0.25|0.75|0.66|1|4|296|88 |
| chr3_3 | exon | 80280190 | 80280616 | 80280190 | ID=Msa0476460-mRNA-1:exon:21989;Parent=Msa0476460-mRNA-1 |
| chr3_3 | exon | 80280826 | 80280834 | 80280826 | ID=Msa0476460-mRNA-1:exon:21988;Parent=Msa0476460-mRNA-1 |
| chr3_3 | exon | 80281618 | 80281739 | 80281618 | ID=Msa0476460-mRNA-1:exon:21987;Parent=Msa0476460-mRNA-1 |
| chr3_3 | exon | 80284271 | 80284275 | 80284271 | ID=Msa0476460-mRNA-1:exon:21986;Parent=Msa0476460-mRNA-1 |
| chr3_3 | CDS | 80284271 | 80284275 | 80284271 | ID=Msa0476460-mRNA-1:cds;Parent=Msa0476460-mRNA-1 |
| chr3_3 | CDS | 80281618 | 80281739 | 80281618 | ID=Msa0476460-mRNA-1:cds;Parent=Msa0476460-mRNA-1 |
| chr3_3 | CDS | 80280826 | 80280834 | 80280826 | ID=Msa0476460-mRNA-1:cds;Parent=Msa0476460-mRNA-1 |
| chr3_3 | CDS | 80280486 | 80280616 | 80280486 | ID=Msa0476460-mRNA-1:cds;Parent=Msa0476460-mRNA-1 |
| chr3_3 | three_prime_UTR | 80280190 | 80280485 | 80280190 | ID=Msa0476460-mRNA-1:three_prime_utr;Parent=Msa0476460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
