AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0897080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897080 MtrunA17_Chr6g0464041 80.189 106 19 2 26 131 12 115 5.73e-42 135
Msa0897080 MtrunA17_Chr6g0464051 92.500 40 3 0 92 131 1 40 3.69e-19 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897080 AT2G25720.1 79.167 48 10 0 84 131 68 115 2.11e-17 72.8

Find 56 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTTGAAGCGAAGAAATT+TGG 0.130657 6_1:-88365427 Msa0897080:CDS
CCAGTTGAAGCGAAGAAATT+TGG 0.144441 6_1:-88371257 Msa0897080:five_prime_UTR
TTGAATTAAAGGAGAGAAAA+AGG 0.238450 6_1:-88365697 Msa0897080:intron
CCAAATTTCTTCGCTTCAAC+TGG 0.244723 6_1:+88365427 None:intergenic
CAGTTGAAGCGAAGAAATTT+GGG 0.268374 6_1:-88365426 Msa0897080:CDS
GATGATCACCACATGTAATT+AGG 0.285663 6_1:-88361268 Msa0897080:three_prime_UTR
CCAAATTTCTTCGCTTCAAC+TGG 0.287408 6_1:+88371257 None:intergenic
AAGAATCGACATTGGAGTTT+GGG 0.301859 6_1:+88365661 None:intergenic
TCGAGATTAGGGTTAGGGTT+AGG 0.322976 6_1:+88365562 None:intergenic
TCGAGATTAGGGTTAGGGTT+AGG 0.322976 6_1:+88371389 None:intergenic
GAAGAATCGACATTGGAGTT+TGG 0.323259 6_1:+88365660 None:intergenic
AGGGTTTCATCTTCGAGATT+AGG 0.329115 6_1:+88365550 None:intergenic
AGGGTTTCATCTTCGAGATT+AGG 0.329115 6_1:+88371377 None:intergenic
GGGTTTCATCTTCGAGATTA+GGG 0.335734 6_1:+88365551 None:intergenic
GGGTTTCATCTTCGAGATTA+GGG 0.335734 6_1:+88371378 None:intergenic
CGAGATTAGGGTTAGGGTTA+GGG 0.341744 6_1:+88365563 None:intergenic
CGAGATTAGGGTTAGGGTTA+GGG 0.341744 6_1:+88371390 None:intergenic
GAACAACAGAAGTTAGAAAA+AGG 0.349574 6_1:-88361296 Msa0897080:three_prime_UTR
ACAGATTTCACCTTCGCTTT+CGG 0.360322 6_1:+88371227 None:intergenic
TCATCTTCGAGATTAGGGTT+AGG 0.372056 6_1:+88365556 None:intergenic
TCATCTTCGAGATTAGGGTT+AGG 0.372056 6_1:+88371383 None:intergenic
CAGTTGAAGCGAAGAAATTT+GGG 0.374119 6_1:-88371256 Msa0897080:five_prime_UTR
CATCTTCGAGATTAGGGTTA+GGG 0.402341 6_1:+88365557 None:intergenic
CATCTTCGAGATTAGGGTTA+GGG 0.402341 6_1:+88371384 None:intergenic
TGACAATGTTATCTGCTTGA+TGG 0.404643 6_1:-88361440 Msa0897080:three_prime_UTR
ATTATTCAATTGCTAAATCT+AGG 0.405363 6_1:-88361237 Msa0897080:three_prime_UTR
ATCAAAACCATGAGTGGTAT+TGG 0.418465 6_1:-88361394 Msa0897080:three_prime_UTR
ATTTAGCAATTGAATAATCT+AGG 0.427994 6_1:+88361242 None:intergenic
CGTTGATGGAGCAGAATCTT+CGG 0.448219 6_1:-88371327 Msa0897080:five_prime_UTR
TTGATAACAGAGCCTAGCTT+TGG 0.449398 6_1:+88361412 None:intergenic
CCTAATCGAAGAAGAAGAAA+AGG 0.463408 6_1:-88365530 Msa0897080:CDS
TGAAGTTAGCAGCGGTGGTA+TGG 0.490340 6_1:-88361152 Msa0897080:three_prime_UTR
CAATGTCGATTCTTCTTCAA+AGG 0.491998 6_1:-88365652 Msa0897080:CDS
CCTAATCGAAGAAGAAGAAA+AGG 0.494326 6_1:-88371357 Msa0897080:five_prime_UTR
TTGACAACAGAGCCTAGCTT+TGG 0.501316 6_1:+88367320 None:intergenic
CCAGGTCGATTATCTTTCAA+AGG 0.527233 6_1:-88371476 Msa0897080:five_prime_UTR
CGTGCGTATGGATCTGACAT+TGG 0.532299 6_1:+88371506 None:intergenic
CTTTGAAGAAGAATCGACAT+TGG 0.540555 6_1:+88365653 None:intergenic
CCTTTGAAAGATAATCGACC+TGG 0.548520 6_1:+88371476 None:intergenic
CCATACGCACGCGTAAAACC+AGG 0.552373 6_1:-88371494 Msa0897080:five_prime_UTR
TTGATTGAAATGCCAAAGCT+AGG 0.575910 6_1:-88367332 Msa0897080:exon
ATTGTTGAAGTTAGCAGCGG+TGG 0.578185 6_1:-88361157 Msa0897080:three_prime_UTR
GAAATCTGTTGAAGATGCGT+TGG 0.586113 6_1:-88365383 Msa0897080:CDS
GATCACCACATGTAATTAGG+AGG 0.593184 6_1:-88361265 Msa0897080:three_prime_UTR
TTGATGGAAATGCCAAAGCT+AGG 0.595679 6_1:-88361424 Msa0897080:three_prime_UTR
AGAATCGACATTGGAGTTTG+GGG 0.608377 6_1:+88365662 None:intergenic
GCTCTGTTGTCAACCATGAG+TGG 0.617105 6_1:-88367310 Msa0897080:intron
GGTCGATTATCTTTCAAAGG+AGG 0.623028 6_1:-88371473 Msa0897080:five_prime_UTR
TCTGTTATCAAAACCATGAG+TGG 0.631708 6_1:-88361400 Msa0897080:three_prime_UTR
CTAGGCCTCCTAATTACATG+TGG 0.642890 6_1:+88361260 None:intergenic
TGGGTATGAACCGAAAGCGA+AGG 0.644661 6_1:-88371237 Msa0897080:five_prime_UTR
ATACTCTTCGAACAGAGTTG+TGG 0.645507 6_1:-88361328 Msa0897080:three_prime_UTR
AGTTGAAGCGAAGAAATTTG+GGG 0.651480 6_1:-88365425 Msa0897080:CDS
TATATTGTTGAAGTTAGCAG+CGG 0.665063 6_1:-88361160 Msa0897080:three_prime_UTR
GTGTTAAGAAGAAAGCTGAT+CGG 0.682674 6_1:-88365354 Msa0897080:CDS
TGGGGATGAACCGAAAACGA+AGG 0.702710 6_1:-88365407 Msa0897080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTA+AGG + chr6_1:88367478-88367497 None:intergenic 0.0%
!! TTGTTAATAAAAAATGTATT+TGG - chr6_1:88361566-88361585 Msa0897080:intron 10.0%
!!! TTTAACATTGAAATTTTAAA+TGG - chr6_1:88362450-88362469 Msa0897080:intron 10.0%
!! TTAAAATGTATTGTAAAATT+AGG - chr6_1:88364374-88364393 Msa0897080:intron 10.0%
!! AAATTATAAAAATATTCAGA+TGG - chr6_1:88364687-88364706 Msa0897080:intron 10.0%
!!! AATTACTTCTAAAAAAATTA+GGG + chr6_1:88367353-88367372 None:intergenic 10.0%
!!! AAATTACTTCTAAAAAAATT+AGG + chr6_1:88367354-88367373 None:intergenic 10.0%
!!! TTTAACATTGAAATTTTAAA+TGG - chr6_1:88362450-88362469 Msa0897080:intron 10.0%
!! ACAAAAATAAAATTAATTCA+AGG + chr6_1:88364235-88364254 None:intergenic 10.0%
!! TTAAAATGTATTGTAAAATT+AGG - chr6_1:88364374-88364393 Msa0897080:intron 10.0%
!! ACAAATTAAATCAAAACATT+AGG + chr6_1:88361523-88361542 None:intergenic 15.0%
!!! AAGCAAATAAATAATGTTTT+TGG - chr6_1:88361987-88362006 Msa0897080:intron 15.0%
!!! AGCAAATAAATAATGTTTTT+GGG - chr6_1:88361988-88362007 Msa0897080:intron 15.0%
!!! TTTTAATTTTTCAATTACGA+TGG - chr6_1:88362796-88362815 Msa0897080:intron 15.0%
!! TTAATTACTCAATTAAAATG+CGG + chr6_1:88364326-88364345 None:intergenic 15.0%
!!! TTTTCTCTATATTAAAAACA+AGG - chr6_1:88364462-88364481 Msa0897080:intron 15.0%
!! ATTGTTAAGAATAAGAATAT+TGG + chr6_1:88364798-88364817 None:intergenic 15.0%
!! AATATTCTTATTCTTAACAA+TGG - chr6_1:88364797-88364816 Msa0897080:intron 15.0%
!! ATATAAGCAATTTAAGAAAT+CGG + chr6_1:88365199-88365218 None:intergenic 15.0%
!!! AATACTATTTTGTTATTGTT+AGG - chr6_1:88365557-88365576 Msa0897080:CDS 15.0%
!! TAAAAAAAAAAAACAACAGT+TGG + chr6_1:88366024-88366043 None:intergenic 15.0%
!! CAAAATAATAAAAAAGAAAC+TGG - chr6_1:88366372-88366391 Msa0897080:intron 15.0%
!! GTATTTAATTATGATGTATT+TGG + chr6_1:88366687-88366706 None:intergenic 15.0%
!! ATCTTATGAAAAATAGTTTA+TGG - chr6_1:88367906-88367925 Msa0897080:intron 15.0%
!! TTTATGTATTACTTAAAGTT+TGG + chr6_1:88368090-88368109 None:intergenic 15.0%
!! AAAAAAAAAGAGTAAATTGT+TGG - chr6_1:88368993-88369012 Msa0897080:intron 15.0%
!! AAAATAAGTTTGAAGAAAAT+GGG + chr6_1:88369769-88369788 None:intergenic 15.0%
!! AAAAATAAGTTTGAAGAAAA+TGG + chr6_1:88369770-88369789 None:intergenic 15.0%
!! CAAAAACAATTTAGAAAAAA+TGG + chr6_1:88369810-88369829 None:intergenic 15.0%
!! TTAATTACTCAATTAAAATG+CGG + chr6_1:88364326-88364345 None:intergenic 15.0%
!!! TTTTCTCTATATTAAAAACA+AGG - chr6_1:88364462-88364481 Msa0897080:intron 15.0%
!!! TTTTAGGTCAAATTTTGTTT+GGG - chr6_1:88361618-88361637 Msa0897080:intron 20.0%
!! ACTAAAATTTCATCATATAC+AGG + chr6_1:88361735-88361754 None:intergenic 20.0%
!!! TTTAGTTCAAGATAATGTTT+TGG - chr6_1:88361749-88361768 Msa0897080:intron 20.0%
!!! TTAGTTCAAGATAATGTTTT+GGG - chr6_1:88361750-88361769 Msa0897080:intron 20.0%
!!! TATAGCAAAAGATATGTTTT+TGG - chr6_1:88361832-88361851 Msa0897080:intron 20.0%
!!! ATAGCAAAAGATATGTTTTT+GGG - chr6_1:88361833-88361852 Msa0897080:intron 20.0%
!! AAATATAAGTTAATCCAAAC+AGG + chr6_1:88361859-88361878 None:intergenic 20.0%
!!! TTATGTTTTACTCATATGTT+GGG + chr6_1:88362226-88362245 None:intergenic 20.0%
!!! TTTATGTTTTACTCATATGT+TGG + chr6_1:88362227-88362246 None:intergenic 20.0%
!! TTGTTTATGTATACATCATT+GGG + chr6_1:88362485-88362504 None:intergenic 20.0%
!! ATTGTTTATGTATACATCAT+TGG + chr6_1:88362486-88362505 None:intergenic 20.0%
!! TGTATACATAAACAATTGAA+CGG - chr6_1:88362490-88362509 Msa0897080:intron 20.0%
!!! TTAGTGAAATTATGTTTTTG+TGG - chr6_1:88362846-88362865 Msa0897080:intron 20.0%
!!! ATAATTTTTGTTCTGATTCT+TGG + chr6_1:88363004-88363023 None:intergenic 20.0%
!! AGATCAAAAAGTAATACAAA+AGG + chr6_1:88363386-88363405 None:intergenic 20.0%
!!! TTTTGTATTACTTTTTGATC+TGG - chr6_1:88363385-88363404 Msa0897080:intron 20.0%
!!! AATTATAAATATGAGCATTG+CGG + chr6_1:88363455-88363474 None:intergenic 20.0%
!! AAAAAACAAAGACACTAAAA+TGG + chr6_1:88363683-88363702 None:intergenic 20.0%
!! TAGTCTATTTATTCATCATT+GGG + chr6_1:88363995-88364014 None:intergenic 20.0%
!! ATAGTCTATTTATTCATCAT+TGG + chr6_1:88363996-88364015 None:intergenic 20.0%
!!! GTTTGGATAATAACTTATTT+TGG - chr6_1:88364139-88364158 Msa0897080:intron 20.0%
!! ATAGCTTAATAAATCATCTA+CGG + chr6_1:88364200-88364219 None:intergenic 20.0%
!! TAATTACTCAATTAAAATGC+GGG + chr6_1:88364325-88364344 None:intergenic 20.0%
!! TCTCTTATAGTTATAGTTAT+GGG - chr6_1:88364424-88364443 Msa0897080:intron 20.0%
!! TTTAAATTCTGATAACTACA+TGG - chr6_1:88364511-88364530 Msa0897080:intron 20.0%
!!! TTTCTTTATTTTCTCTCATT+AGG - chr6_1:88365004-88365023 Msa0897080:intron 20.0%
!!! GATGTTTTATACTTTACTAT+TGG - chr6_1:88365032-88365051 Msa0897080:intron 20.0%
!!! TCAAAAGTATGTTTAAGTTT+TGG - chr6_1:88365094-88365113 Msa0897080:intron 20.0%
!!! TAGCATTCTTTTGTTAATTT+TGG - chr6_1:88365117-88365136 Msa0897080:intron 20.0%
!!! TATTTTTTATATCAAACTCG+TGG - chr6_1:88365381-88365400 Msa0897080:CDS 20.0%
!! AAAAGAAGTTAGAAAAAGAA+AGG - chr6_1:88365443-88365462 Msa0897080:CDS 20.0%
!!! GGATTTTTCTTTTATATTGT+TGG - chr6_1:88365578-88365597 Msa0897080:CDS 20.0%
!! TTAACGTTCTAATAATTCAT+TGG - chr6_1:88365966-88365985 Msa0897080:intron 20.0%
!!! TGTTTTTGTTAATAGAGTAA+TGG + chr6_1:88366116-88366135 None:intergenic 20.0%
!! ACTCAACAATATAATAGTTA+TGG - chr6_1:88366326-88366345 Msa0897080:intron 20.0%
!!! TTTTCTTTAAGTATGTGTTT+TGG - chr6_1:88366608-88366627 Msa0897080:intron 20.0%
!! AACAAAACACTTTGAATTAA+AGG - chr6_1:88366936-88366955 Msa0897080:intron 20.0%
!!! TATGAATTTGATGAAGTTTT+AGG - chr6_1:88367433-88367452 Msa0897080:intron 20.0%
!!! TAGCAAAAGATGAATATTTT+TGG - chr6_1:88367727-88367746 Msa0897080:intron 20.0%
!!! AGCAAAAGATGAATATTTTT+GGG - chr6_1:88367728-88367747 Msa0897080:intron 20.0%
!! TAAGTTCTTACTAACAAAAA+TGG - chr6_1:88367820-88367839 Msa0897080:intron 20.0%
!! TTGTTTATGTATACATCATT+GGG + chr6_1:88362485-88362504 None:intergenic 20.0%
!! ATTGTTTATGTATACATCAT+TGG + chr6_1:88362486-88362505 None:intergenic 20.0%
!! TGTATACATAAACAATTGAA+CGG - chr6_1:88362490-88362509 Msa0897080:intron 20.0%
!!! TTAGTTAAATTATGCTTTTG+TGG - chr6_1:88368727-88368746 Msa0897080:intron 20.0%
!!! ATTACCTAAGTTGAAAATTA+AGG - chr6_1:88368909-88368928 Msa0897080:intron 20.0%
!! AAGTTAATTGATACATCATT+GGG + chr6_1:88369027-88369046 None:intergenic 20.0%
!! AAAGTTAATTGATACATCAT+TGG + chr6_1:88369028-88369047 None:intergenic 20.0%
!!! TGTATCAATTAACTTTTGAA+CGG - chr6_1:88369032-88369051 Msa0897080:intron 20.0%
!! TAACTTAAACATCAACATAT+TGG + chr6_1:88369477-88369496 None:intergenic 20.0%
!! TAGTCTATTTATTCATCATT+GGG + chr6_1:88363995-88364014 None:intergenic 20.0%
!! ATAGTCTATTTATTCATCAT+TGG + chr6_1:88363996-88364015 None:intergenic 20.0%
!! ATGAATAAATAGACTATTGA+CGG - chr6_1:88363999-88364018 Msa0897080:intron 20.0%
!!! GTTTGGATAATAACTTATTT+TGG - chr6_1:88364139-88364158 Msa0897080:intron 20.0%
!! ATAGCTTAATAAATCATCTA+CGG + chr6_1:88364200-88364219 None:intergenic 20.0%
!! TAATTACTCAATTAAAATGC+GGG + chr6_1:88364325-88364344 None:intergenic 20.0%
!! TCTCTTATAGTTATTGTTAT+GGG - chr6_1:88370529-88370548 Msa0897080:intron 20.0%
!! TTTAAATTCTGATAACTACT+TGG - chr6_1:88370616-88370635 Msa0897080:intron 20.0%
!!! TTTTTTTTATATCAAGCTCA+TGG - chr6_1:88371291-88371310 Msa0897080:five_prime_UTR 20.0%
!! ATTTAGCAATTGAATAATCT+AGG + chr6_1:88371405-88371424 None:intergenic 20.0%
!! ATTATTCAATTGCTAAATCT+AGG - chr6_1:88371407-88371426 Msa0897080:five_prime_UTR 20.0%
!!! CAATGTAATACTATTTTGTT+AGG - chr6_1:88365551-88365570 Msa0897080:CDS 20.0%
!! TATGGATTTGATGAAGTTTT+AGG - chr6_1:88361602-88361621 Msa0897080:intron 25.0%
!!! GTTTTAGGTCAAATTTTGTT+TGG - chr6_1:88361617-88361636 Msa0897080:intron 25.0%
!! TTTTGCTAGTTGTATGTTTT+TGG - chr6_1:88361708-88361727 Msa0897080:intron 25.0%
! TATAAGCAATTAATCCAAAC+AGG + chr6_1:88361776-88361795 None:intergenic 25.0%
! CGAAAATTGTATAACGAAAA+TGG - chr6_1:88361949-88361968 Msa0897080:intron 25.0%
!! TATGTTTTACTCATATGTTG+GGG + chr6_1:88362225-88362244 None:intergenic 25.0%
! AGTAAAACATAAATGCAGAA+CGG - chr6_1:88362234-88362253 Msa0897080:intron 25.0%
! TCAAATAAGCTTATCCAAAT+AGG - chr6_1:88362378-88362397 Msa0897080:intron 25.0%
! ACTCAGAACTGATAAAAATT+AGG - chr6_1:88362425-88362444 Msa0897080:intron 25.0%
! GAAATTATGATTTCGTTGTT+TGG - chr6_1:88362967-88362986 Msa0897080:intron 25.0%
!! ATTACTTGAGTTGCAAATTA+AGG - chr6_1:88363028-88363047 Msa0897080:intron 25.0%
! GTGTTAATAGAGTAAATTGT+TGG - chr6_1:88363072-88363091 Msa0897080:intron 25.0%
! TAGTCAATTGATACATCATT+GGG + chr6_1:88363106-88363125 None:intergenic 25.0%
! ATAGTCAATTGATACATCAT+TGG + chr6_1:88363107-88363126 None:intergenic 25.0%
! TGTATCAATTGACTATTGAA+CGG - chr6_1:88363111-88363130 Msa0897080:intron 25.0%
!!! TTTCTGTTTGTGTTTTTAGA+AGG - chr6_1:88363347-88363366 Msa0897080:intron 25.0%
!!! TTCTGTTTGTGTTTTTAGAA+GGG - chr6_1:88363348-88363367 Msa0897080:intron 25.0%
! TAACTTAAACATCGACATAT+TGG + chr6_1:88363526-88363545 None:intergenic 25.0%
!! CATGCAATATTTTGTTACAA+TGG - chr6_1:88363593-88363612 Msa0897080:intron 25.0%
!!! TATTACCCGGTAAATTTTTT+CGG - chr6_1:88363657-88363676 Msa0897080:intron 25.0%
! ATTTCAGCATAAAAAATGTG+AGG + chr6_1:88363947-88363966 None:intergenic 25.0%
! TGAATAAATAGACTATTGAG+CGG - chr6_1:88364000-88364019 Msa0897080:intron 25.0%
! TAGCTTAATAAATCATCTAC+GGG + chr6_1:88364199-88364218 None:intergenic 25.0%
!! ATTGTAAAATTAGGTTGCAA+TGG - chr6_1:88364383-88364402 Msa0897080:intron 25.0%
! GTCTCTTATAGTTATAGTTA+TGG - chr6_1:88364423-88364442 Msa0897080:intron 25.0%
!! TATAGTTATGGGCTTTTATA+CGG - chr6_1:88364435-88364454 Msa0897080:intron 25.0%
! TAGTCTATTTATCCATCATT+GGG + chr6_1:88364544-88364563 None:intergenic 25.0%
! ATAGTCTATTTATCCATCAT+TGG + chr6_1:88364545-88364564 None:intergenic 25.0%
! TGAATGAATGAATGAATGAA+TGG + chr6_1:88364656-88364675 None:intergenic 25.0%
!!! TGGTTGATTTGTCTTATAAT+TGG - chr6_1:88364899-88364918 Msa0897080:intron 25.0%
!!! TTGTTTCTATTAGACTATTG+AGG - chr6_1:88364937-88364956 Msa0897080:intron 25.0%
! ATGTGAGATTATAGTGATTA+TGG + chr6_1:88364985-88365004 None:intergenic 25.0%
!!! TTTATTTTCTCTCATTAGGT+TGG - chr6_1:88365008-88365027 Msa0897080:intron 25.0%
! TTGTTCAGTTTACTAAATCT+AGG - chr6_1:88365510-88365529 Msa0897080:CDS 25.0%
!! GTGGTATGAATAATTTTTGT+AGG - chr6_1:88365614-88365633 Msa0897080:CDS 25.0%
!!! TTGTTTTGTTTAGATGAGAT+AGG - chr6_1:88365649-88365668 Msa0897080:CDS 25.0%
! ACAATAAAAACTATCTTGAC+AGG - chr6_1:88365688-88365707 Msa0897080:CDS 25.0%
! ATGACATTTGTATAACTATG+TGG + chr6_1:88366081-88366100 None:intergenic 25.0%
!!! GTTTTCAAGTTTATGTTGAA+GGG + chr6_1:88366919-88366938 None:intergenic 25.0%
!!! TGTTTTCAAGTTTATGTTGA+AGG + chr6_1:88366920-88366939 None:intergenic 25.0%
! TTGAATTAAAGGAGAGAAAA+AGG - chr6_1:88366947-88366966 Msa0897080:intron 25.0%
! AACACACTCATAATCTAATT+CGG + chr6_1:88367572-88367591 None:intergenic 25.0%
!! TTTTGCTAGTTGTAAGTTTT+TGG - chr6_1:88367597-88367616 Msa0897080:intron 25.0%
!! TTAGTTCAAGATGAATGTTT+TGG - chr6_1:88367642-88367661 Msa0897080:intron 25.0%
!! TAGTTCAAGATGAATGTTTT+GGG - chr6_1:88367643-88367662 Msa0897080:intron 25.0%
! TTATGTTAATTTACTCCATG+AGG - chr6_1:88367943-88367962 Msa0897080:intron 25.0%
! TCAAATAAGCTTATCCAAAT+AGG - chr6_1:88362378-88362397 Msa0897080:intron 25.0%
! ACTCAGAACTGATAAAAATT+AGG - chr6_1:88362425-88362444 Msa0897080:intron 25.0%
!!! ATCTTGTTTATTTTCTTGCA+AGG - chr6_1:88368670-88368689 Msa0897080:intron 25.0%
! GAAATTATGATTTCGTTGTT+TGG - chr6_1:88362967-88362986 Msa0897080:intron 25.0%
!! TAGACCTTAATTTTCAACTT+AGG + chr6_1:88368916-88368935 None:intergenic 25.0%
! GTGTTAATAGAGTAAATTGT+TGG - chr6_1:88363072-88363091 Msa0897080:intron 25.0%
!!! TTTCTGTTTGTGTTTTTAGA+AGG - chr6_1:88363347-88363366 Msa0897080:intron 25.0%
!!! TTCTGTTTGTGTTTTTAGAA+GGG - chr6_1:88363348-88363367 Msa0897080:intron 25.0%
! AGATCAAAGAGTAATACAAA+AGG + chr6_1:88369337-88369356 None:intergenic 25.0%
!! TTTTGTATTACTCTTTGATC+TGG - chr6_1:88369336-88369355 Msa0897080:intron 25.0%
! TTAAACATCAACATATTGGA+TGG + chr6_1:88369473-88369492 None:intergenic 25.0%
! AATGGGAAAAACAATTTACA+AGG + chr6_1:88369616-88369635 None:intergenic 25.0%
! AACACAGAGAAACTTAAAAT+GGG + chr6_1:88369633-88369652 None:intergenic 25.0%
! AAACACAGAGAAACTTAAAA+TGG + chr6_1:88369634-88369653 None:intergenic 25.0%
!!! TTTTGTTATGCTGAATTGTT+TGG - chr6_1:88369927-88369946 Msa0897080:intron 25.0%
! CAGTCATTAAATAGAGTAAA+TGG + chr6_1:88370006-88370025 None:intergenic 25.0%
! TAATGACTGAATAAGAAATG+AGG - chr6_1:88370017-88370036 Msa0897080:intron 25.0%
! AATGACTGAATAAGAAATGA+GGG - chr6_1:88370018-88370037 Msa0897080:intron 25.0%
! TAGCTTAATAAATCATCTAC+GGG + chr6_1:88364199-88364218 None:intergenic 25.0%
!! ATTGTAAAATTAGGTTGCAA+TGG - chr6_1:88364383-88364402 Msa0897080:intron 25.0%
! GTCTCTTATAGTTATTGTTA+TGG - chr6_1:88370528-88370547 Msa0897080:intron 25.0%
!! TATTGTTATGGGCTTTTATA+CGG - chr6_1:88370540-88370559 Msa0897080:intron 25.0%
! ATCATGAATGAATGAATGAA+TGG + chr6_1:88364660-88364679 None:intergenic 25.0%
!!! TGGTTGATTTGTCTTATAAT+TGG - chr6_1:88364899-88364918 Msa0897080:intron 25.0%
! TTTCTTTTTGTCGATGGTTT+TGG + chr6_1:88361214-88361233 None:intergenic 30.0%
! CTTCTTTTTCTTTTTGTCGA+TGG + chr6_1:88361220-88361239 None:intergenic 30.0%
! CTTTTCTTCTTCTTCGATTA+GGG + chr6_1:88361289-88361308 None:intergenic 30.0%
GAAAAGGAAAAAATCGTTGA+TGG - chr6_1:88361303-88361322 Msa0897080:three_prime_UTR 30.0%
!! TTTGGCTCTTAGTTAAAGTA+TGG - chr6_1:88361584-88361603 Msa0897080:intron 30.0%
ATGAATAAGACAATCCAAAC+GGG + chr6_1:88362014-88362033 None:intergenic 30.0%
CATGAATAAGACAATCCAAA+CGG + chr6_1:88362015-88362034 None:intergenic 30.0%
! GTTTGGATTGTCTTATTCAT+GGG - chr6_1:88362014-88362033 Msa0897080:intron 30.0%
TCAAAATAAGCCTAACCAAA+CGG - chr6_1:88362198-88362217 Msa0897080:intron 30.0%
GAGCTTATTACATACACAAA+GGG + chr6_1:88362261-88362280 None:intergenic 30.0%
AGAGCTTATTACATACACAA+AGG + chr6_1:88362262-88362281 None:intergenic 30.0%
TAAACAATTGAACGGTTACA+CGG - chr6_1:88362498-88362517 Msa0897080:intron 30.0%
AGCTTATATAGAATCATCCA+CGG + chr6_1:88362708-88362727 None:intergenic 30.0%
TATATAAGCTATGAGATCTG+AGG - chr6_1:88362718-88362737 Msa0897080:intron 30.0%
ATATAAGCTATGAGATCTGA+GGG - chr6_1:88362719-88362738 Msa0897080:intron 30.0%
AAAACATGTGATGAAAACTG+TGG - chr6_1:88363277-88363296 Msa0897080:intron 30.0%
TATATAAGCTATGAGATCTG+AGG - chr6_1:88362718-88362737 Msa0897080:intron 30.0%
ATATAAGCTATGAGATCTGA+GGG - chr6_1:88362719-88362738 Msa0897080:intron 30.0%
TTAAACATCGACATATTGGA+TGG + chr6_1:88363522-88363541 None:intergenic 30.0%
ATAGTTCAAAACTCAACTGT+CGG + chr6_1:88363640-88363659 None:intergenic 30.0%
!!! TTGAGTTTTGAACTATTACC+CGG - chr6_1:88363644-88363663 Msa0897080:intron 30.0%
AAATGGCCGAAAAAATTTAC+CGG + chr6_1:88363666-88363685 None:intergenic 30.0%
!!! TAACTTATTTTGGTGCATGA+TGG - chr6_1:88364149-88364168 Msa0897080:intron 30.0%
ATGGTTATGAATTAAACCTG+TGG - chr6_1:88364168-88364187 Msa0897080:intron 30.0%
TTATTAAGCTATGAGATCTG+AGG - chr6_1:88364208-88364227 Msa0897080:intron 30.0%
TATTAAGCTATGAGATCTGA+GGG - chr6_1:88364209-88364228 Msa0897080:intron 30.0%
CCATTAAAAACACAAGCAAT+GGG + chr6_1:88364275-88364294 None:intergenic 30.0%
TCCATTAAAAACACAAGCAA+TGG + chr6_1:88364276-88364295 None:intergenic 30.0%
! CATAGAATAACTACGAGTTT+TGG + chr6_1:88364349-88364368 None:intergenic 30.0%
!! TTCCTTTTGTTGTGTGTTTT+TGG - chr6_1:88364876-88364895 Msa0897080:intron 30.0%
! ATGCTAGCTCAAATTTTCAA+TGG - chr6_1:88365157-88365176 Msa0897080:intron 30.0%
! TGCTAGCTCAAATTTTCAAT+GGG - chr6_1:88365158-88365177 Msa0897080:intron 30.0%
TAAGCAATTTAAGAAATCGG+AGG + chr6_1:88365196-88365215 None:intergenic 30.0%
GTTAGAAAAAGAAAGGAGAA+AGG - chr6_1:88365450-88365469 Msa0897080:CDS 30.0%
TTTAGTAAACTGAACAATCG+AGG + chr6_1:88365507-88365526 None:intergenic 30.0%
TTTATATTGTTGGTCGAAGT+TGG - chr6_1:88365588-88365607 Msa0897080:CDS 30.0%
TTGTTTAGATGAGATAGGAA+TGG - chr6_1:88365654-88365673 Msa0897080:CDS 30.0%
!! TCTATTGATTCAAATGTCCA+TGG + chr6_1:88365792-88365811 None:intergenic 30.0%
!! TCTATTGATTCAAATGTCCA+TGG + chr6_1:88365792-88365811 None:intergenic 30.0%
!!! AGTATGTGTTTTGGTTTTGA+TGG - chr6_1:88366617-88366636 Msa0897080:intron 30.0%
TTTCATTCAATAGCGTGATT+TGG + chr6_1:88366657-88366676 None:intergenic 30.0%
!! TTACCATTTTCGATTCGAAT+TGG - chr6_1:88366713-88366732 Msa0897080:intron 30.0%
ATAAAAGTAGGTGACATGTT+GGG + chr6_1:88366782-88366801 None:intergenic 30.0%
GAAGTTGTAAGCATAAAAGT+AGG + chr6_1:88366794-88366813 None:intergenic 30.0%
! TTTCTTTTTGTCGATGGTTT+TGG + chr6_1:88361214-88361233 None:intergenic 30.0%
! CTTCTTTTTCTTTTTGTCGA+TGG + chr6_1:88361220-88361239 None:intergenic 30.0%
! CTTTTCTTCTTCTTCGATTA+GGG + chr6_1:88361289-88361308 None:intergenic 30.0%
!!! TGAATATTTTTGGGTCTGTT+TGG - chr6_1:88367737-88367756 Msa0897080:intron 30.0%
! TTTTTGTTAGTGAAACCTCA+TGG + chr6_1:88367961-88367980 None:intergenic 30.0%
CAAAATAAGCCTAATCAAAC+TGG - chr6_1:88368063-88368082 Msa0897080:intron 30.0%
TAAACAATTGAACGGTTACA+CGG - chr6_1:88362498-88362517 Msa0897080:intron 30.0%
AGCTTATATAGAATCATCCA+CGG + chr6_1:88362708-88362727 None:intergenic 30.0%
TATATAAGCTATGAGATCTG+AGG - chr6_1:88362718-88362737 Msa0897080:intron 30.0%
ATATAAGCTATGAGATCTGA+GGG - chr6_1:88362719-88362738 Msa0897080:intron 30.0%
AAAACATGTGATGAAAACTG+TGG - chr6_1:88363277-88363296 Msa0897080:intron 30.0%
TATATAAGCTATGAGATCTG+AGG - chr6_1:88362718-88362737 Msa0897080:intron 30.0%
ATATAAGCTATGAGATCTGA+GGG - chr6_1:88362719-88362738 Msa0897080:intron 30.0%
!! GCAGATACAGTTTTTAGATA+TGG + chr6_1:88369387-88369406 None:intergenic 30.0%
!! CATGCAATGTTTTGTTACAA+TGG - chr6_1:88369544-88369563 Msa0897080:intron 30.0%
ATAGTTCAAAACTCAACTGT+CGG + chr6_1:88363640-88363659 None:intergenic 30.0%
!!! TAACTTATTTTGGTGCATGA+TGG - chr6_1:88364149-88364168 Msa0897080:intron 30.0%
ATGGTTATGAATTAAACCTG+TGG - chr6_1:88364168-88364187 Msa0897080:intron 30.0%
TTATTAAGCTATGAGATCTG+AGG - chr6_1:88364208-88364227 Msa0897080:intron 30.0%
TATTAAGCTATGAGATCTGA+GGG - chr6_1:88364209-88364228 Msa0897080:intron 30.0%
CCATTAAAAACACAAGCAAT+GGG + chr6_1:88364275-88364294 None:intergenic 30.0%
TCCATTAAAAACACAAGCAA+TGG + chr6_1:88364276-88364295 None:intergenic 30.0%
! CATAGAATAACTACGAGTTT+TGG + chr6_1:88364349-88364368 None:intergenic 30.0%
TAGTCTATTTGTCCATCATT+GGG + chr6_1:88370649-88370668 None:intergenic 30.0%
ATAGTCTATTTGTCCATCAT+TGG + chr6_1:88370650-88370669 None:intergenic 30.0%
CAGACTAGAAAATATTCAGA+TGG - chr6_1:88370821-88370840 Msa0897080:intron 30.0%
AGACCATTGTTAAGAATAAG+AGG + chr6_1:88364803-88364822 None:intergenic 30.0%
GTTGTTAAGTGTACTCATTA+TGG - chr6_1:88364837-88364856 Msa0897080:intron 30.0%
!! TTCCTTTTGTTGTGTGTTTT+TGG - chr6_1:88364876-88364895 Msa0897080:intron 30.0%
TGAACAGTGAGAAAAATGTT+GGG + chr6_1:88371159-88371178 None:intergenic 30.0%
TTGAACAGTGAGAAAAATGT+TGG + chr6_1:88371160-88371179 None:intergenic 30.0%
GAACAACAGAAGTTAGAAAA+AGG - chr6_1:88371348-88371367 Msa0897080:five_prime_UTR 30.0%
TATATTGTTGAAGTTAGCAG+CGG - chr6_1:88371484-88371503 Msa0897080:five_prime_UTR 30.0%
! CCTTTTCTTCTTCTTCGATT+AGG + chr6_1:88361290-88361309 None:intergenic 35.0%
CCTAATCGAAGAAGAAGAAA+AGG - chr6_1:88361287-88361306 Msa0897080:three_prime_UTR 35.0%
CAGTTGAAGCGAAGAAATTT+GGG - chr6_1:88361388-88361407 Msa0897080:three_prime_UTR 35.0%
AGCTGATCGTTACTGTAAAT+AGG - chr6_1:88361473-88361492 Msa0897080:intron 35.0%
! CGTTTGGATTGTCTTATTCA+TGG - chr6_1:88362013-88362032 Msa0897080:intron 35.0%
CAAAATAAGCCTAACCAAAC+GGG - chr6_1:88362199-88362218 Msa0897080:intron 35.0%
! GCTCTTTTCATAAGCTATCT+TGG - chr6_1:88362277-88362296 Msa0897080:intron 35.0%
TTCAGATAGACCAACAGTTA+AGG + chr6_1:88362405-88362424 None:intergenic 35.0%
TTATGTATACATCATTGGGC+AGG + chr6_1:88362481-88362500 None:intergenic 35.0%
GGGAGATAGATAGATTGATA+GGG + chr6_1:88362548-88362567 None:intergenic 35.0%
AGGGAGATAGATAGATTGAT+AGG + chr6_1:88362549-88362568 None:intergenic 35.0%
ATTAACACCATAAGCGCTAT+TGG + chr6_1:88363060-88363079 None:intergenic 35.0%
TAGAAAGAGAAATGCAGATC+AGG + chr6_1:88363155-88363174 None:intergenic 35.0%
!! GCGGATACAGTTTTTAGATA+TGG + chr6_1:88363436-88363455 None:intergenic 35.0%
AATGGCCGAAAAAATTTACC+GGG + chr6_1:88363665-88363684 None:intergenic 35.0%
TAGTGAATGATGATATGCAC+TGG - chr6_1:88363728-88363747 Msa0897080:intron 35.0%
AGTGAATGATGATATGCACT+GGG - chr6_1:88363729-88363748 Msa0897080:intron 35.0%
!! GTTTTAGACTGCACTATTGA+TGG - chr6_1:88363761-88363780 Msa0897080:intron 35.0%
TGAGTCAGATAAAGCTTTCA+AGG + chr6_1:88363797-88363816 None:intergenic 35.0%
TTGGGCACATGATGATTTAA+AGG + chr6_1:88363977-88363996 None:intergenic 35.0%
!! CCCATTGCTTGTGTTTTTAA+TGG - chr6_1:88364272-88364291 Msa0897080:intron 35.0%
TAGACTATTGAGAAGCTACA+TGG - chr6_1:88364557-88364576 Msa0897080:intron 35.0%
GATAGATAGAGAGAAGAAAG+AGG + chr6_1:88364606-88364625 None:intergenic 35.0%
ATTCTTAGCTATGAGATCTG+AGG - chr6_1:88364758-88364777 Msa0897080:intron 35.0%
TTCTTAGCTATGAGATCTGA+GGG - chr6_1:88364759-88364778 Msa0897080:intron 35.0%
CACCAAAAACACACAACAAA+AGG + chr6_1:88364881-88364900 None:intergenic 35.0%
!!! CTTTTGTTGTGTGTTTTTGG+TGG - chr6_1:88364879-88364898 Msa0897080:intron 35.0%
TGGAACAGTGAGAAAAATGT+TGG + chr6_1:88365251-88365270 None:intergenic 35.0%
TTGATTGAAATGCCAAAGCT+AGG - chr6_1:88365312-88365331 Msa0897080:intron 35.0%
!! AGTTTTATCAACACCACTCA+TGG + chr6_1:88365350-88365369 None:intergenic 35.0%
!! AAAGAAAGGAGAAAGGTATC+TGG - chr6_1:88365457-88365476 Msa0897080:CDS 35.0%
ATCTTGACAGGAGAACAATT+TGG - chr6_1:88365700-88365719 Msa0897080:intron 35.0%
! TCATGATCCTCTTATTTGAG+AGG - chr6_1:88365749-88365768 Msa0897080:intron 35.0%
TAGAGTGTAGAATGAAGTCA+TGG - chr6_1:88365808-88365827 Msa0897080:intron 35.0%
AGAGTGTAGAATGAAGTCAT+GGG - chr6_1:88365809-88365828 Msa0897080:intron 35.0%
! ACATGATCCTCTTATTTGAG+AGG - chr6_1:88365833-88365852 Msa0897080:intron 35.0%
TAGAGTGTAGAATGAAGTCA+TGG - chr6_1:88365808-88365827 Msa0897080:intron 35.0%
AGAGTGTAGAATGAAGTCAT+GGG - chr6_1:88365809-88365828 Msa0897080:intron 35.0%
! AATAGAGAGAGGGAGTATAA+CGG + chr6_1:88366174-88366193 None:intergenic 35.0%
! TTAAACGCGTTTTGCATACT+CGG - chr6_1:88366221-88366240 Msa0897080:intron 35.0%
AGTTTACAACAGACAGAAGA+GGG + chr6_1:88366309-88366328 None:intergenic 35.0%
CTGGTAAAAAGAAAACGACT+CGG - chr6_1:88366391-88366410 Msa0897080:intron 35.0%
AAACACTCACTTTGGCTATT+CGG + chr6_1:88366451-88366470 None:intergenic 35.0%
AAAAACACTCTCACTCACTT+TGG + chr6_1:88366502-88366521 None:intergenic 35.0%
AAACACTCACTTTGGCTATT+CGG + chr6_1:88366451-88366470 None:intergenic 35.0%
CATCCAATTCGAATCGAAAA+TGG + chr6_1:88366719-88366738 None:intergenic 35.0%
!! TTTTCGATTCGAATTGGATG+TGG - chr6_1:88366719-88366738 Msa0897080:intron 35.0%
CATAAAAGTAGGTGACATGT+TGG + chr6_1:88366783-88366802 None:intergenic 35.0%
GACTAAGTCAACAATTGGTA+TGG + chr6_1:88366821-88366840 None:intergenic 35.0%
TGGTTGACTAAGTCAACAAT+TGG + chr6_1:88366826-88366845 None:intergenic 35.0%
AAGAATCGACATTGGAGTTT+GGG + chr6_1:88366986-88367005 None:intergenic 35.0%
! CTTTGAAGAAGAATCGACAT+TGG + chr6_1:88366994-88367013 None:intergenic 35.0%
!! CAATGTCGATTCTTCTTCAA+AGG - chr6_1:88366992-88367011 Msa0897080:intron 35.0%
! CCTTTTCTTCTTCTTCGATT+AGG + chr6_1:88361290-88361309 None:intergenic 35.0%
CCTAATCGAAGAAGAAGAAA+AGG - chr6_1:88361287-88361306 Msa0897080:three_prime_UTR 35.0%
CAGTTGAAGCGAAGAAATTT+GGG - chr6_1:88361388-88361407 Msa0897080:three_prime_UTR 35.0%
AGTTGAAGCGAAGAAATTTG+GGG - chr6_1:88361389-88361408 Msa0897080:three_prime_UTR 35.0%
! ACAGATTTCACCTTCGTTTT+CGG + chr6_1:88367250-88367269 None:intergenic 35.0%
GTGTTAAGAAGAAAGCTGAT+CGG - chr6_1:88361460-88361479 Msa0897080:intron 35.0%
TTCATAAACCACCTTGACAA+AGG - chr6_1:88367862-88367881 Msa0897080:intron 35.0%
TCATAAACCACCTTGACAAA+GGG - chr6_1:88367863-88367882 Msa0897080:intron 35.0%
AAGTTTGGACCAGTTTGATT+AGG + chr6_1:88368075-88368094 None:intergenic 35.0%
! GCTCTTTTCATAAGCTATCT+TGG - chr6_1:88362277-88362296 Msa0897080:intron 35.0%
TCAACAGTTAAGGACCTATT+TGG + chr6_1:88368272-88368291 None:intergenic 35.0%
TCTGATAGACTCAACAGTTA+AGG + chr6_1:88368282-88368301 None:intergenic 35.0%
TTATGTATACATCATTGGGC+AGG + chr6_1:88362481-88362500 None:intergenic 35.0%
! AGCTCAAACTATGCTTTGTT+TGG - chr6_1:88362919-88362938 Msa0897080:intron 35.0%
ATTAACACCATAAGCGCTAT+TGG + chr6_1:88363060-88363079 None:intergenic 35.0%
TAATTGATACATCATTGGGC+AGG + chr6_1:88369023-88369042 None:intergenic 35.0%
AGAAACAAAGAGGAGAATAG+AGG + chr6_1:88369159-88369178 None:intergenic 35.0%
TGATTTGATGCTTTCAGATG+AGG - chr6_1:88369959-88369978 Msa0897080:intron 35.0%
ATAGACTATTGACGGCTATA+TGG - chr6_1:88370097-88370116 Msa0897080:intron 35.0%
TAGACTATTGACGGCTATAT+GGG - chr6_1:88370098-88370117 Msa0897080:intron 35.0%
CAAACAGAAATACACACACA+TGG + chr6_1:88370229-88370248 None:intergenic 35.0%
! CATGTGTGTGTATTTCTGTT+TGG - chr6_1:88370227-88370246 Msa0897080:intron 35.0%
!! CCCATTGCTTGTGTTTTTAA+TGG - chr6_1:88364272-88364291 Msa0897080:intron 35.0%
! TCATCTGAAGCTTATGACAA+TGG + chr6_1:88370869-88370888 None:intergenic 35.0%
ATTCTTAGCTATGAGATCTG+AGG - chr6_1:88364758-88364777 Msa0897080:intron 35.0%
TTCTTAGCTATGAGATCTGA+GGG - chr6_1:88364759-88364778 Msa0897080:intron 35.0%
! AAGAATAAGAGGCGTGATAT+TGG + chr6_1:88370932-88370951 None:intergenic 35.0%
ACGCCTCTTATTCTTAACAA+TGG - chr6_1:88370937-88370956 Msa0897080:intron 35.0%
CACCAAAAACACACAACAAA+AGG + chr6_1:88364881-88364900 None:intergenic 35.0%
!!! CTTTTGTTGTGTGTTTTTGG+TGG - chr6_1:88364879-88364898 Msa0897080:intron 35.0%
TTCAACACTTCTGTTTATGC+AGG - chr6_1:88371175-88371194 Msa0897080:intron 35.0%
TGACAATGTTATCTGCTTGA+TGG - chr6_1:88371204-88371223 Msa0897080:five_prime_UTR 35.0%
TCTGTTATCAAAACCATGAG+TGG - chr6_1:88371244-88371263 Msa0897080:five_prime_UTR 35.0%
ATCAAAACCATGAGTGGTAT+TGG - chr6_1:88371250-88371269 Msa0897080:five_prime_UTR 35.0%
! AGTTTTACCAATACCACTCA+TGG + chr6_1:88371260-88371279 None:intergenic 35.0%
GATGATCACCACATGTAATT+AGG - chr6_1:88371376-88371395 Msa0897080:five_prime_UTR 35.0%
! CCTTTGAAAGATAATCGACC+TGG + chr6_1:88361171-88361190 None:intergenic 40.0%
CCAGGTCGATTATCTTTCAA+AGG - chr6_1:88361168-88361187 Msa0897080:three_prime_UTR 40.0%
GGTCGATTATCTTTCAAAGG+AGG - chr6_1:88361171-88361190 Msa0897080:three_prime_UTR 40.0%
!!! CTTTTTGTCGATGGTTTTGG+AGG + chr6_1:88361211-88361230 None:intergenic 40.0%
CATCTTCGAGATTAGGGTTA+GGG + chr6_1:88361263-88361282 None:intergenic 40.0%
TCATCTTCGAGATTAGGGTT+AGG + chr6_1:88361264-88361283 None:intergenic 40.0%
GGGTTTCATCTTCGAGATTA+GGG + chr6_1:88361269-88361288 None:intergenic 40.0%
AGGGTTTCATCTTCGAGATT+AGG + chr6_1:88361270-88361289 None:intergenic 40.0%
CCAAATTTCTTCGCTTCAAC+TGG + chr6_1:88361390-88361409 None:intergenic 40.0%
CCAGTTGAAGCGAAGAAATT+TGG - chr6_1:88361387-88361406 Msa0897080:three_prime_UTR 40.0%
ACAGATTTCACCTTCGCTTT+CGG + chr6_1:88361420-88361439 None:intergenic 40.0%
!! GATAATGTTTTGGGCCTGTT+TGG - chr6_1:88361759-88361778 Msa0897080:intron 40.0%
!!! GATATGTTTTTGGGCCTGTT+TGG - chr6_1:88361842-88361861 Msa0897080:intron 40.0%
!!! ATAATGTTTTTGGGCCCGTT+TGG - chr6_1:88361997-88362016 Msa0897080:intron 40.0%
CCAACAGTTAAGGACCTATT+TGG + chr6_1:88362395-88362414 None:intergenic 40.0%
CCAAATAGGTCCTTAACTGT+TGG - chr6_1:88362392-88362411 Msa0897080:intron 40.0%
GATTGATAGGGATTGAGATC+AGG + chr6_1:88362536-88362555 None:intergenic 40.0%
TCACAACCTTCATACAGAGA+GGG + chr6_1:88362666-88362685 None:intergenic 40.0%
TTCACAACCTTCATACAGAG+AGG + chr6_1:88362667-88362686 None:intergenic 40.0%
GTCTATACCAATAGCGCTTA+TGG - chr6_1:88363050-88363069 Msa0897080:intron 40.0%
CAATTGATACATCATTGGGC+AGG + chr6_1:88363102-88363121 None:intergenic 40.0%
AGAATAGAGAAGGAGAGAGA+GGG + chr6_1:88363183-88363202 None:intergenic 40.0%
GACAAAGAGGAGAATAGAGA+AGG + chr6_1:88363193-88363212 None:intergenic 40.0%
GACAGACATGGTTTAGTGTT+AGG + chr6_1:88363495-88363514 None:intergenic 40.0%
!! TTGGATGGTATTGACAGACA+TGG + chr6_1:88363507-88363526 None:intergenic 40.0%
TAGACTATTGAGCGGCTATA+TGG - chr6_1:88364008-88364027 Msa0897080:intron 40.0%
AGACTATTGAGCGGCTATAT+GGG - chr6_1:88364009-88364028 Msa0897080:intron 40.0%
CAAACAGAAATACACGCACA+TGG + chr6_1:88364124-88364143 None:intergenic 40.0%
! CATGTGCGTGTATTTCTGTT+TGG - chr6_1:88364122-88364141 Msa0897080:intron 40.0%
AATATTCAGATGGTGTGCGA+AGG - chr6_1:88364697-88364716 Msa0897080:intron 40.0%
TCATCTGCAGCTTATGACAA+TGG + chr6_1:88364735-88364754 None:intergenic 40.0%
GATCACCACTTGTAATTAGG+AGG - chr6_1:88365481-88365500 Msa0897080:CDS 40.0%
GGAGAACAATTTGGAAGTTG+CGG - chr6_1:88365709-88365728 Msa0897080:intron 40.0%
TGCTCAACCTCTCAAATAAG+AGG + chr6_1:88365759-88365778 None:intergenic 40.0%
TGCTCAACCTCTCAAATAAG+AGG + chr6_1:88365759-88365778 None:intergenic 40.0%
ATACTCCCTCTCTCTATTCT+CGG - chr6_1:88366176-88366195 Msa0897080:intron 40.0%
AAGAGAGAGAAGGACTAACA+AGG + chr6_1:88366202-88366221 None:intergenic 40.0%
AACGCGTTTAAAGAGAGAGA+AGG + chr6_1:88366212-88366231 None:intergenic 40.0%
! GATATAACCTAGGTAATGGC+TGG + chr6_1:88366280-88366299 None:intergenic 40.0%
GGTCGATATAACCTAGGTAA+TGG + chr6_1:88366284-88366303 None:intergenic 40.0%
GTTTACAACAGACAGAAGAG+GGG + chr6_1:88366308-88366327 None:intergenic 40.0%
GAGTTTACAACAGACAGAAG+AGG + chr6_1:88366310-88366329 None:intergenic 40.0%
!! GACTCGGTTAACTTGTATGT+GGG - chr6_1:88366407-88366426 Msa0897080:intron 40.0%
!! AGCCAAAGTGAGTGTTTTTG+AGG - chr6_1:88366454-88366473 Msa0897080:intron 40.0%
!! GCCAAAGTGAGTGTTTTTGA+GGG - chr6_1:88366455-88366474 Msa0897080:intron 40.0%
TCCCTCAAAAACACTCACTT+TGG + chr6_1:88366459-88366478 None:intergenic 40.0%
TCTCACTCACTTTGGCTATT+CGG + chr6_1:88366494-88366513 None:intergenic 40.0%
!!! AGTGAGTGAGAGTGTTTTTG+AGG - chr6_1:88366503-88366522 Msa0897080:intron 40.0%
!!! GTGAGTGAGAGTGTTTTTGA+GGG - chr6_1:88366504-88366523 Msa0897080:intron 40.0%
TCGCTCAAAAACACTCACTT+TGG + chr6_1:88366551-88366570 None:intergenic 40.0%
!! TGAGTGTTTTTGAGCGAGTT+TGG - chr6_1:88366554-88366573 Msa0897080:intron 40.0%
!! CAATAGCGTGATTTGGTTTG+TGG + chr6_1:88366650-88366669 None:intergenic 40.0%
AGAATCGACATTGGAGTTTG+GGG + chr6_1:88366985-88367004 None:intergenic 40.0%
GAAGAATCGACATTGGAGTT+TGG + chr6_1:88366987-88367006 None:intergenic 40.0%
!!! CTTTTTGTCGATGGTTTTGG+AGG + chr6_1:88361211-88361230 None:intergenic 40.0%
CATCTTCGAGATTAGGGTTA+GGG + chr6_1:88361263-88361282 None:intergenic 40.0%
TCATCTTCGAGATTAGGGTT+AGG + chr6_1:88361264-88361283 None:intergenic 40.0%
GGGTTTCATCTTCGAGATTA+GGG + chr6_1:88361269-88361288 None:intergenic 40.0%
AGGGTTTCATCTTCGAGATT+AGG + chr6_1:88361270-88361289 None:intergenic 40.0%
CCAAATTTCTTCGCTTCAAC+TGG + chr6_1:88361390-88361409 None:intergenic 40.0%
CCAGTTGAAGCGAAGAAATT+TGG - chr6_1:88361387-88361406 Msa0897080:three_prime_UTR 40.0%
GAAATCTGTTGAAGATGCGT+TGG - chr6_1:88367261-88367280 Msa0897080:intron 40.0%
AGCTGATCGGTACTGTAAAT+AGG - chr6_1:88367303-88367322 Msa0897080:intron 40.0%
!! ATGAATGTTTTGGGTCTGCT+TGG - chr6_1:88367652-88367671 Msa0897080:intron 40.0%
TCAATCCAAACCCTTTGTCA+AGG + chr6_1:88367876-88367895 None:intergenic 40.0%
!! GTTTTGTTCACAACCTGATC+TGG - chr6_1:88362520-88362539 Msa0897080:intron 40.0%
TCACAACCTTCATACAGAGA+GGG + chr6_1:88362666-88362685 None:intergenic 40.0%
TTCACAACCTTCATACAGAG+AGG + chr6_1:88362667-88362686 None:intergenic 40.0%
GTCTATACCAATAGCGCTTA+TGG - chr6_1:88363050-88363069 Msa0897080:intron 40.0%
AACAAAGAGGAGAATAGAGG+AGG + chr6_1:88369156-88369175 None:intergenic 40.0%
!! TTGGATGGTATTGACAGACA+TGG + chr6_1:88363507-88363526 None:intergenic 40.0%
TGAATGATGACACATGCACT+GGG - chr6_1:88369683-88369702 Msa0897080:intron 40.0%
AGTTTAGACTGCACCATTGA+TGG - chr6_1:88369714-88369733 Msa0897080:intron 40.0%
AGGCTACACATTTCCATCAA+TGG + chr6_1:88369730-88369749 None:intergenic 40.0%
TCATCATTGGGCATAATTGC+AGG + chr6_1:88370073-88370092 None:intergenic 40.0%
GAGAGATAGAGAGAAGAAAG+AGG + chr6_1:88370711-88370730 None:intergenic 40.0%
AATATTCAGATGGTGTGCGA+AGG - chr6_1:88364697-88364716 Msa0897080:intron 40.0%
ACAGTGAGAAAAATGTTGGG+AGG + chr6_1:88371156-88371175 None:intergenic 40.0%
TTGATGGAAATGCCAAAGCT+AGG - chr6_1:88371220-88371239 Msa0897080:five_prime_UTR 40.0%
! TTGATAACAGAGCCTAGCTT+TGG + chr6_1:88371235-88371254 None:intergenic 40.0%
ATACTCTTCGAACAGAGTTG+TGG - chr6_1:88371316-88371335 Msa0897080:five_prime_UTR 40.0%
GATCACCACATGTAATTAGG+AGG - chr6_1:88371379-88371398 Msa0897080:five_prime_UTR 40.0%
!!! GGTTTTGGAGGTTGTAGCTA+GGG + chr6_1:88361199-88361218 None:intergenic 45.0%
!!! TGGTTTTGGAGGTTGTAGCT+AGG + chr6_1:88361200-88361219 None:intergenic 45.0%
CGAGATTAGGGTTAGGGTTA+GGG + chr6_1:88361257-88361276 None:intergenic 45.0%
TCGAGATTAGGGTTAGGGTT+AGG + chr6_1:88361258-88361277 None:intergenic 45.0%
! CGTTGATGGAGCAGAATCTT+CGG - chr6_1:88361317-88361336 Msa0897080:three_prime_UTR 45.0%
AACCTTCATACAGAGAGGGA+GGG + chr6_1:88362662-88362681 None:intergenic 45.0%
GAAACCAGTGATAAAAGCCG+TGG - chr6_1:88362688-88362707 Msa0897080:intron 45.0%
! TCATCCACGGCTTTTATCAC+TGG + chr6_1:88362695-88362714 None:intergenic 45.0%
GAGAATAGAGAAGGAGAGAG+AGG + chr6_1:88363184-88363203 None:intergenic 45.0%
! TCATCTACGGGTTAAACCAC+AGG + chr6_1:88364187-88364206 None:intergenic 45.0%
!! CATGGTTTGCTACCCAATGA+TGG - chr6_1:88364529-88364548 Msa0897080:intron 45.0%
TTGACAACAGAGCCTAGCTT+TGG + chr6_1:88365327-88365346 None:intergenic 45.0%
TCGTGGCAATACTCTTCGAA+CGG - chr6_1:88365398-88365417 Msa0897080:CDS 45.0%
ATACTCTTCGAACGGAGTTG+TGG - chr6_1:88365406-88365425 Msa0897080:CDS 45.0%
GGCGATCACCACTTGTAATT+AGG - chr6_1:88365478-88365497 Msa0897080:CDS 45.0%
TATTGTTGGTCGAAGTTGGC+AGG - chr6_1:88365592-88365611 Msa0897080:CDS 45.0%
TTTGAGAGGTTGAGCAACCT+AGG - chr6_1:88365763-88365782 Msa0897080:intron 45.0%
TTGAGAGGTTGAGCAACCTA+GGG - chr6_1:88365764-88365783 Msa0897080:intron 45.0%
TTTGAGAGGTTGAGCAACCT+AGG - chr6_1:88365763-88365782 Msa0897080:intron 45.0%
TTGAGAGGTTGAGCAACCTA+GGG - chr6_1:88365764-88365783 Msa0897080:intron 45.0%
!! CGACTCGGTTAACTTGTATG+TGG - chr6_1:88366406-88366425 Msa0897080:intron 45.0%
! GTTTGGGATTGGGAGAGAAA+TGG + chr6_1:88366846-88366865 None:intergenic 45.0%
! ATGTTGAAGGGAGTGTGTGT+GGG + chr6_1:88366907-88366926 None:intergenic 45.0%
! TATGTTGAAGGGAGTGTGTG+TGG + chr6_1:88366908-88366927 None:intergenic 45.0%
!!! GGTTTTGGAGGTTGTTGCTA+GGG + chr6_1:88367023-88367042 None:intergenic 45.0%
!!! TGGTTTTGGAGGTTGTTGCT+AGG + chr6_1:88367024-88367043 None:intergenic 45.0%
CGAGATTAGGGTTAGGGTTA+GGG + chr6_1:88361257-88361276 None:intergenic 45.0%
TCGAGATTAGGGTTAGGGTT+AGG + chr6_1:88361258-88361277 None:intergenic 45.0%
AACCACCTTGACAAAGGGTT+TGG - chr6_1:88367868-88367887 Msa0897080:intron 45.0%
ATCCAAACCCTTTGTCAAGG+TGG + chr6_1:88367873-88367892 None:intergenic 45.0%
GATAGAGAGACATCCAGATC+AGG + chr6_1:88368414-88368433 None:intergenic 45.0%
AACCTTCATACAGAGAGGGA+GGG + chr6_1:88362662-88362681 None:intergenic 45.0%
GAAACCAGTGATAAAAGCCG+TGG - chr6_1:88362688-88362707 Msa0897080:intron 45.0%
! TCATCCACGGCTTTTATCAC+TGG + chr6_1:88362695-88362714 None:intergenic 45.0%
AAAGAGGAGAATAGAGGAGG+AGG + chr6_1:88369153-88369172 None:intergenic 45.0%
TCACAGAGGGAGAAACAAAG+AGG + chr6_1:88369169-88369188 None:intergenic 45.0%
CACACACACACAATCACAGA+GGG + chr6_1:88369182-88369201 None:intergenic 45.0%
ACACACACACACAATCACAG+AGG + chr6_1:88369183-88369202 None:intergenic 45.0%
GTGATTGTGTGTGTGTGTGT+AGG - chr6_1:88369185-88369204 Msa0897080:intron 45.0%
GTGTGTGTAGGAATGCAAGA+AGG - chr6_1:88369197-88369216 Msa0897080:intron 45.0%
GTAGGAATGCAAGAAGGTTG+TGG - chr6_1:88369203-88369222 Msa0897080:intron 45.0%
GTGAATGATGACACATGCAC+TGG - chr6_1:88369682-88369701 Msa0897080:intron 45.0%
TGGGTCAGACAAAGCTTTCT+AGG + chr6_1:88369750-88369769 None:intergenic 45.0%
! TCATCTACGGGTTAAACCAC+AGG + chr6_1:88364187-88364206 None:intergenic 45.0%
!! CTTGGTTTGCTACCCAATGA+TGG - chr6_1:88370634-88370653 Msa0897080:intron 45.0%
! AGAAGAAAGAGGTGCATGTC+AGG + chr6_1:88370700-88370719 None:intergenic 45.0%
CTAGGCCTCCTAATTACATG+TGG + chr6_1:88371387-88371406 None:intergenic 45.0%
ATTGTTGAAGTTAGCAGCGG+TGG - chr6_1:88371487-88371506 Msa0897080:five_prime_UTR 45.0%
!! AAAAAAAAAAACTTATTTAT+TGG + chr6_1:88361905-88361924 None:intergenic 5.0%
TGGGTATGAACCGAAAGCGA+AGG - chr6_1:88361407-88361426 Msa0897080:three_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr6_1:88362568-88362587 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr6_1:88362567-88362586 None:intergenic 50.0%
TTCATACAGAGAGGGAGGGA+GGG + chr6_1:88362658-88362677 None:intergenic 50.0%
CAACCTTCATACAGAGAGGG+AGG + chr6_1:88362663-88362682 None:intergenic 50.0%
TAGAGAAGGAGAGAGAGGGA+GGG + chr6_1:88363179-88363198 None:intergenic 50.0%
ATAGAGAAGGAGAGAGAGGG+AGG + chr6_1:88363180-88363199 None:intergenic 50.0%
CTCTTTGTCTCTCCCTCTGT+GGG - chr6_1:88363204-88363223 Msa0897080:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG - chr6_1:88363227-88363246 Msa0897080:intron 50.0%
GTGTGTGGAGGAATGCAAGA+AGG - chr6_1:88363246-88363265 Msa0897080:intron 50.0%
GGAGGAATGCAAGAAGGTTG+TGG - chr6_1:88363252-88363271 Msa0897080:intron 50.0%
GAGAGAGAGAGATGCAGATC+AGG + chr6_1:88364047-88364066 None:intergenic 50.0%
! AGAAGAAAGAGGTGCACGTC+AGG + chr6_1:88364595-88364614 None:intergenic 50.0%
TCCAACGCTTCTGTTCATGC+AGG - chr6_1:88365267-88365286 Msa0897080:intron 50.0%
! TCCTGCATGAACAGAAGCGT+TGG + chr6_1:88365271-88365290 None:intergenic 50.0%
GCTCTGTTGTCAACCATGAG+TGG - chr6_1:88365334-88365353 Msa0897080:intron 50.0%
CGAGGCCTCCTAATTACAAG+TGG + chr6_1:88365489-88365508 None:intergenic 50.0%
TGAGAGGTTGAGCAACCTAG+GGG - chr6_1:88365765-88365784 Msa0897080:intron 50.0%
TGAGAGGTTGAGCAACCTAG+GGG - chr6_1:88365765-88365784 Msa0897080:intron 50.0%
CAAGGCCGAGAATAGAGAGA+GGG + chr6_1:88366184-88366203 None:intergenic 50.0%
ACAAGGCCGAGAATAGAGAG+AGG + chr6_1:88366185-88366204 None:intergenic 50.0%
GTTCTCTCTCTTGCCACATG+TGG - chr6_1:88366254-88366273 Msa0897080:intron 50.0%
AGGGGAGGTCGATATAACCT+AGG + chr6_1:88366290-88366309 None:intergenic 50.0%
TACAACAGACAGAAGAGGGG+AGG + chr6_1:88366305-88366324 None:intergenic 50.0%
! CGAGTTTGGAACGAATGACG+TGG - chr6_1:88366568-88366587 Msa0897080:intron 50.0%
! TGCGTCGTGTGTTTGGGATT+GGG + chr6_1:88366856-88366875 None:intergenic 50.0%
AGTGAGTGCGTCGTGTGTTT+GGG + chr6_1:88366862-88366881 None:intergenic 50.0%
GGGTTACGTGTGTTAGTGGT+GGG + chr6_1:88366887-88366906 None:intergenic 50.0%
TGGGTTACGTGTGTTAGTGG+TGG + chr6_1:88366888-88366907 None:intergenic 50.0%
! GTGTGGGTTACGTGTGTTAG+TGG + chr6_1:88366891-88366910 None:intergenic 50.0%
TGGGGATGAACCGAAAACGA+AGG - chr6_1:88367237-88367256 Msa0897080:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr6_1:88362568-88362587 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr6_1:88362567-88362586 None:intergenic 50.0%
TTCATACAGAGAGGGAGGGA+GGG + chr6_1:88362658-88362677 None:intergenic 50.0%
CAACCTTCATACAGAGAGGG+AGG + chr6_1:88362663-88362682 None:intergenic 50.0%
AATAGAGGAGGAGGAGGAGA+GGG + chr6_1:88369144-88369163 None:intergenic 50.0%
CAGATGAGGCTTTGCTTGTG+TGG - chr6_1:88369973-88369992 Msa0897080:intron 50.0%
GAGAGAGAGAGATGCAGATC+AGG + chr6_1:88364047-88364066 None:intergenic 50.0%
TGAAGTTAGCAGCGGTGGTA+TGG - chr6_1:88371492-88371511 Msa0897080:five_prime_UTR 50.0%
!!! CCTGGTTTTACGCGTGCGTA+TGG + chr6_1:88361153-88361172 None:intergenic 55.0%
CCATACGCACGCGTAAAACC+AGG - chr6_1:88361150-88361169 Msa0897080:three_prime_UTR 55.0%
ATGTTGGGGCCCGTTTGGTT+AGG + chr6_1:88362211-88362230 None:intergenic 55.0%
CTCATATGTTGGGGCCCGTT+TGG + chr6_1:88362216-88362235 None:intergenic 55.0%
CTTCATACAGAGAGGGAGGG+AGG + chr6_1:88362659-88362678 None:intergenic 55.0%
CTCCCTCCCTCTCTGTATGA+AGG - chr6_1:88362657-88362676 Msa0897080:intron 55.0%
CCACAGAGGGAGAGACAAAG+AGG + chr6_1:88363206-88363225 None:intergenic 55.0%
CCTCTTTGTCTCTCCCTCTG+TGG - chr6_1:88363203-88363222 Msa0897080:intron 55.0%
CACACACACACACCCACAGA+GGG + chr6_1:88363219-88363238 None:intergenic 55.0%
ACACACACACACACCCACAG+AGG + chr6_1:88363220-88363239 None:intergenic 55.0%
GTGTGTGTGTGTGTGTGTGG+AGG - chr6_1:88363234-88363253 Msa0897080:intron 55.0%
GTAGAGCACGCACGCAAACA+GGG + chr6_1:88364102-88364121 None:intergenic 55.0%
TGTTGGTCGAAGTTGGCAGG+TGG - chr6_1:88365595-88365614 Msa0897080:CDS 55.0%
GAGAGGTTGAGCAACCTAGG+GGG - chr6_1:88365766-88365785 Msa0897080:intron 55.0%
TCAAATGTCCATGGCCCCCT+AGG + chr6_1:88365783-88365802 None:intergenic 55.0%
GAGAGGTTGAGCAACCTAGG+GGG - chr6_1:88365766-88365785 Msa0897080:intron 55.0%
TCAAATGTCCATGGCCCCCT+AGG + chr6_1:88365783-88365802 None:intergenic 55.0%
! AGGTAATGGCTGGCCACATG+TGG + chr6_1:88366270-88366289 None:intergenic 55.0%
CATGTGGCCAGCCATTACCT+AGG - chr6_1:88366270-88366289 Msa0897080:intron 55.0%
! GTGCGTCGTGTGTTTGGGAT+TGG + chr6_1:88366857-88366876 None:intergenic 55.0%
GAGTGAGTGCGTCGTGTGTT+TGG + chr6_1:88366863-88366882 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGGGA+GGG + chr6_1:88362564-88362583 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+AGG + chr6_1:88362565-88362584 None:intergenic 55.0%
CTTCATACAGAGAGGGAGGG+AGG + chr6_1:88362659-88362678 None:intergenic 55.0%
CTCCCTCCCTCTCTGTATGA+AGG - chr6_1:88362657-88362676 Msa0897080:intron 55.0%
ATAGAGGAGGAGGAGGAGAG+GGG + chr6_1:88369143-88369162 None:intergenic 55.0%
GAATAGAGGAGGAGGAGGAG+AGG + chr6_1:88369145-88369164 None:intergenic 55.0%
GAGGAGAATAGAGGAGGAGG+AGG + chr6_1:88369150-88369169 None:intergenic 55.0%
AGCACGCACGCAAACATGGA+TGG + chr6_1:88370203-88370222 None:intergenic 55.0%
GTAGAGCACGCACGCAAACA+TGG + chr6_1:88364102-88364121 None:intergenic 55.0%
AGCACGCACGCAAACAGGGA+TGG + chr6_1:88364098-88364117 None:intergenic 60.0%
GGTAGAGCACGCACGCAAAC+AGG + chr6_1:88364103-88364122 None:intergenic 60.0%
TTGAGCAACCTAGGGGGCCA+TGG - chr6_1:88365772-88365791 Msa0897080:intron 60.0%
TTGAGCAACCTAGGGGGCCA+TGG - chr6_1:88365772-88365791 Msa0897080:intron 60.0%
TACAGAGAGGGAGGGAGGGA+GGG + chr6_1:88362654-88362673 None:intergenic 60.0%
ATACAGAGAGGGAGGGAGGG+AGG + chr6_1:88362655-88362674 None:intergenic 60.0%
GAGAGAGAGGGAGAGAGGGA+GGG + chr6_1:88369116-88369135 None:intergenic 60.0%
AGAGAGAGAGGGAGAGAGGG+AGG + chr6_1:88369117-88369136 None:intergenic 60.0%
GGGAGAGAGAGAGGGAGAGA+GGG + chr6_1:88369120-88369139 None:intergenic 60.0%
TAGAGGAGGAGGAGGAGAGG+GGG + chr6_1:88369142-88369161 None:intergenic 60.0%
GGGAGAGAGGGAGGGAGAGA+GGG + chr6_1:88369108-88369127 None:intergenic 65.0%
AGGGAGAGAGGGAGGGAGAG+AGG + chr6_1:88369109-88369128 None:intergenic 65.0%
GGGGAGAGAGAGAGGGAGAG+AGG + chr6_1:88369121-88369140 None:intergenic 65.0%
GAGAGGGGGGGAGAGAGAGA+GGG + chr6_1:88369128-88369147 None:intergenic 65.0%
AGAGGAGGAGGAGGAGAGGG+GGG + chr6_1:88369141-88369160 None:intergenic 65.0%
GGAGAGGGGGGGAGAGAGAG+AGG + chr6_1:88369129-88369148 None:intergenic 70.0%
GAGGAGGAGGAGGAGAGGGG+GGG + chr6_1:88369140-88369159 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 88361141 88371525 88361141 ID=Msa0897080;Name=Msa0897080
chr6_1 mRNA 88361141 88371525 88361141 ID=Msa0897080-mRNA-1;Parent=Msa0897080;Name=Msa0897080-mRNA-1;_AED=0.32;_eAED=0.32;_QI=378|0|0.25|1|1|1|4|327|131
chr6_1 exon 88361141 88361469 88361141 ID=Msa0897080-mRNA-1:exon:14985;Parent=Msa0897080-mRNA-1
chr6_1 exon 88365350 88365708 88365350 ID=Msa0897080-mRNA-1:exon:14984;Parent=Msa0897080-mRNA-1
chr6_1 exon 88367311 88367377 88367311 ID=Msa0897080-mRNA-1:exon:14983;Parent=Msa0897080-mRNA-1
chr6_1 exon 88371180 88371525 88371180 ID=Msa0897080-mRNA-1:exon:14982;Parent=Msa0897080-mRNA-1
chr6_1 five_prime_UTR 88371180 88371525 88371180 ID=Msa0897080-mRNA-1:five_prime_utr;Parent=Msa0897080-mRNA-1
chr6_1 five_prime_UTR 88367346 88367377 88367346 ID=Msa0897080-mRNA-1:five_prime_utr;Parent=Msa0897080-mRNA-1
chr6_1 CDS 88367311 88367345 88367311 ID=Msa0897080-mRNA-1:cds;Parent=Msa0897080-mRNA-1
chr6_1 CDS 88365350 88365708 88365350 ID=Msa0897080-mRNA-1:cds;Parent=Msa0897080-mRNA-1
chr6_1 CDS 88361468 88361469 88361468 ID=Msa0897080-mRNA-1:cds;Parent=Msa0897080-mRNA-1
chr6_1 three_prime_UTR 88361141 88361467 88361141 ID=Msa0897080-mRNA-1:three_prime_utr;Parent=Msa0897080-mRNA-1
Gene Sequence

>Msa0897080

ATGCCAAAGCTAGGCTCTGTTGTCAACCATGAGTGGAGAGAAAAAGGTAAATTCATTCTCCCCAAACTCCAATGTCGATTCTTCTTCAAAGGAAGAACCCTAGCAACAACCTCCAAAACCATCGACAAAAAGAAAAAGAAGAAAAAACACAACAAAAACCCTAACCCTAACCCTAATCTCGAAGATGAAACCCTAATCGAAGAAGAAGAAAAGGAGAAACTCGTTGAAAATGAAGCAGAATCATCAGAGTATACAATCGATGCAGCGAAGAAAATGAAGTACGATCAGCTTTTTCCAGTTGAAGCGAAGAAATTTGGGGATGAACCGAAAACGAAGGTGAAATCTGTTGAAGATGCGTTGGATGATCGTGTTAAGAAGAAAGCTGATCGGTACTGA
Protein sequence

>Msa0897080

MPKLGSVVNHEWREKGKFILPKLQCRFFFKGRTLATTSKTIDKKKKKKKHNKNPNPNPNLEDETLIEEEEKEKLVENEAESSEYTIDAAKKMKYDQLFPVEAKKFGDEPKTKVKSVEDALDDRVKKKADRY*