Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374560 | XP_003602061.1 | 96.838 | 506 | 16 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1038 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374560 | sp|Q8GX69|BGA16_ARATH | 61.876 | 501 | 186 | 3 | 10 | 506 | 6 | 505 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374560 | G7J4Z9 | 96.838 | 506 | 16 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1038 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0374560 | 0.820565 | 6.412204e-53 | -8.615850e-47 |
| Msa0011040 | Msa0374560 | 0.816280 | 5.998444e-52 | -8.615850e-47 |
| Msa0013270 | Msa0374560 | 0.810583 | 1.072631e-50 | -8.615850e-47 |
| Msa0021870 | Msa0374560 | 0.812299 | 4.546399e-51 | -8.615850e-47 |
| Msa0024650 | Msa0374560 | 0.833044 | 6.683339e-56 | -8.615850e-47 |
| Msa0025570 | Msa0374560 | 0.829966 | 3.829109e-55 | -8.615850e-47 |
| Msa0025700 | Msa0374560 | 0.830634 | 2.629562e-55 | -8.615850e-47 |
| Msa0036550 | Msa0374560 | 0.800109 | 1.681303e-48 | -8.615850e-47 |
| Msa0038010 | Msa0374560 | 0.810576 | 1.076012e-50 | -8.615850e-47 |
| Msa0043840 | Msa0374560 | 0.802348 | 5.856085e-49 | -8.615850e-47 |
| Msa0046430 | Msa0374560 | 0.806526 | 7.883186e-50 | -8.615850e-47 |
| Msa0048380 | Msa0374560 | 0.817052 | 4.027171e-52 | -8.615850e-47 |
| Msa0054050 | Msa0374560 | 0.809583 | 1.760963e-50 | -8.615850e-47 |
| Msa0073110 | Msa0374560 | 0.840807 | 6.959781e-58 | -8.615850e-47 |
| Msa0090500 | Msa0374560 | 0.805918 | 1.058660e-49 | -8.615850e-47 |
| Msa0098380 | Msa0374560 | 0.809860 | 1.535597e-50 | -8.615850e-47 |
| Msa0111780 | Msa0374560 | 0.812704 | 3.708571e-51 | -8.615850e-47 |
| Msa0120450 | Msa0374560 | 0.820828 | 5.581709e-53 | -8.615850e-47 |
| Msa0121320 | Msa0374560 | 0.822978 | 1.773853e-53 | -8.615850e-47 |
| Msa0125600 | Msa0374560 | 0.815384 | 9.503640e-52 | -8.615850e-47 |
| Msa0132250 | Msa0374560 | 0.806932 | 6.470033e-50 | -8.615850e-47 |
| Msa0137760 | Msa0374560 | 0.807128 | 5.878747e-50 | -8.615850e-47 |
| Msa0137970 | Msa0374560 | 0.802504 | 5.436119e-49 | -8.615850e-47 |
| Msa0143150 | Msa0374560 | 0.805494 | 1.299553e-49 | -8.615850e-47 |
| Msa0148670 | Msa0374560 | 0.827741 | 1.323246e-54 | -8.615850e-47 |
| Msa0163690 | Msa0374560 | 0.815504 | 8.937779e-52 | -8.615850e-47 |
| Msa0166180 | Msa0374560 | 0.825838 | 3.768699e-54 | -8.615850e-47 |
| Msa0175060 | Msa0374560 | 0.812092 | 5.045442e-51 | -8.615850e-47 |
| Msa0195190 | Msa0374560 | 0.807462 | 4.994925e-50 | -8.615850e-47 |
| Msa0206370 | Msa0374560 | 0.826049 | 3.356487e-54 | -8.615850e-47 |
| Msa0224870 | Msa0374560 | 0.805751 | 1.147374e-49 | -8.615850e-47 |
| Msa0235080 | Msa0374560 | 0.802690 | 4.978105e-49 | -8.615850e-47 |
| Msa0238110 | Msa0374560 | 0.800480 | 1.413165e-48 | -8.615850e-47 |
| Msa0366510 | Msa0374560 | 0.808678 | 2.752827e-50 | -8.615850e-47 |
| Msa0374470 | Msa0374560 | 0.976270 | 1.664225e-141 | -8.615850e-47 |
| Msa0374560 | Msa0374600 | 0.976458 | 7.272973e-142 | -8.615850e-47 |
| Msa0374560 | Msa0375860 | 0.807042 | 6.130487e-50 | -8.615850e-47 |
| Msa0374560 | Msa0380110 | 0.801900 | 7.238939e-49 | -8.615850e-47 |
| Msa0374560 | Msa0386910 | 0.831048 | 2.081519e-55 | -8.615850e-47 |
| Msa0374560 | Msa0401500 | 0.843961 | 1.015016e-58 | -8.615850e-47 |
| Msa0374560 | Msa0405200 | 0.828435 | 9.006269e-55 | -8.615850e-47 |
| Msa0374560 | Msa0414480 | 0.803563 | 3.284741e-49 | -8.615850e-47 |
| Msa0374560 | Msa0423630 | 0.905664 | 3.379786e-80 | -8.615850e-47 |
| Msa0374560 | Msa0433090 | 0.802975 | 4.347081e-49 | -8.615850e-47 |
| Msa0374560 | Msa0444210 | 0.813278 | 2.775581e-51 | -8.615850e-47 |
| Msa0374560 | Msa0444380 | 0.819420 | 1.172578e-52 | -8.615850e-47 |
| Msa0374560 | Msa0449500 | 0.823823 | 1.125533e-53 | -8.615850e-47 |
| Msa0374560 | Msa0454770 | 0.804776 | 1.836300e-49 | -8.615850e-47 |
| Msa0374560 | Msa0470420 | 0.966897 | 1.542235e-126 | -8.615850e-47 |
| Msa0374560 | Msa0481670 | 0.816692 | 4.851101e-52 | -8.615850e-47 |
| Msa0374560 | Msa0490060 | 0.806040 | 9.979322e-50 | -8.615850e-47 |
| Msa0374560 | Msa0496380 | 0.818728 | 1.684652e-52 | -8.615850e-47 |
| Msa0374560 | Msa0497680 | 0.824551 | 7.593481e-54 | -8.615850e-47 |
| Msa0374560 | Msa0501080 | 0.804718 | 1.888145e-49 | -8.615850e-47 |
| Msa0374560 | Msa0523720 | 0.843500 | 1.348911e-58 | -8.615850e-47 |
| Msa0374560 | Msa0524710 | 0.809024 | 2.321015e-50 | -8.615850e-47 |
| Msa0374560 | Msa0525400 | 0.951250 | 3.034724e-109 | -8.615850e-47 |
| Msa0374560 | Msa0529360 | 0.815433 | 9.267657e-52 | -8.615850e-47 |
| Msa0374560 | Msa0531030 | 0.804804 | 1.811856e-49 | -8.615850e-47 |
| Msa0374560 | Msa0531050 | 0.814154 | 1.780233e-51 | -8.615850e-47 |
| Msa0374560 | Msa0531080 | 0.807024 | 6.186932e-50 | -8.615850e-47 |
| Msa0374560 | Msa0540640 | 0.815318 | 9.830165e-52 | -8.615850e-47 |
| Msa0374560 | Msa0546590 | 0.813541 | 2.430039e-51 | -8.615850e-47 |
| Msa0374560 | Msa0549170 | 0.826979 | 2.015052e-54 | -8.615850e-47 |
| Msa0374560 | Msa0561830 | 0.811762 | 5.953328e-51 | -8.615850e-47 |
| Msa0374560 | Msa0567330 | 0.818946 | 1.502742e-52 | -8.615850e-47 |
| Msa0374560 | Msa0567570 | 0.814994 | 1.160044e-51 | -8.615850e-47 |
| Msa0374560 | Msa0576320 | 0.822621 | 2.147523e-53 | -8.615850e-47 |
| Msa0374560 | Msa0584970 | 0.806325 | 8.691707e-50 | -8.615850e-47 |
| Msa0374560 | Msa0587730 | 0.815473 | 9.080437e-52 | -8.615850e-47 |
| Msa0374560 | Msa0587920 | 0.830210 | 3.339392e-55 | -8.615850e-47 |
| Msa0374560 | Msa0589460 | 0.806616 | 7.544952e-50 | -8.615850e-47 |
| Msa0374560 | Msa0602050 | 0.812210 | 4.754457e-51 | -8.615850e-47 |
| Msa0374560 | Msa0604280 | 0.805573 | 1.250542e-49 | -8.615850e-47 |
| Msa0374560 | Msa0606600 | 0.802503 | 5.439996e-49 | -8.615850e-47 |
| Msa0374560 | Msa0614960 | 0.809883 | 1.518028e-50 | -8.615850e-47 |
| Msa0374560 | Msa0624930 | 0.809427 | 1.902809e-50 | -8.615850e-47 |
| Msa0374560 | Msa0629720 | 0.810116 | 1.352636e-50 | -8.615850e-47 |
| Msa0374560 | Msa0643190 | 0.805491 | 1.300949e-49 | -8.615850e-47 |
| Msa0374560 | Msa0645370 | 0.829107 | 6.192522e-55 | -8.615850e-47 |
| Msa0374560 | Msa0647300 | 0.820758 | 5.791125e-53 | -8.615850e-47 |
| Msa0374560 | Msa0651820 | 0.802771 | 4.789874e-49 | -8.615850e-47 |
| Msa0374560 | Msa0655370 | 0.813646 | 2.303511e-51 | -8.615850e-47 |
| Msa0374560 | Msa0667600 | 0.837991 | 3.749133e-57 | -8.615850e-47 |
| Msa0374560 | Msa0671400 | 0.818936 | 1.510698e-52 | -8.615850e-47 |
| Msa0374560 | Msa0682110 | 0.812227 | 4.714220e-51 | -8.615850e-47 |
| Msa0374560 | Msa0682160 | 0.803664 | 3.129851e-49 | -8.615850e-47 |
| Msa0374560 | Msa0686830 | 0.822466 | 2.333885e-53 | -8.615850e-47 |
| Msa0374560 | Msa0689840 | 0.819213 | 1.307130e-52 | -8.615850e-47 |
| Msa0374560 | Msa0699170 | 0.813051 | 3.112612e-51 | -8.615850e-47 |
| Msa0374560 | Msa0716980 | 0.828188 | 1.033071e-54 | -8.615850e-47 |
| Msa0374560 | Msa0717030 | 0.821355 | 4.219675e-53 | -8.615850e-47 |
| Msa0374560 | Msa0732970 | 0.807811 | 4.211492e-50 | -8.615850e-47 |
| Msa0374560 | Msa0733560 | 0.804597 | 2.000911e-49 | -8.615850e-47 |
| Msa0374560 | Msa0734700 | 0.815999 | 6.931391e-52 | -8.615850e-47 |
| Msa0374560 | Msa0735140 | 0.804802 | 1.813262e-49 | -8.615850e-47 |
| Msa0374560 | Msa0750830 | 0.810476 | 1.130953e-50 | -8.615850e-47 |
| Msa0374560 | Msa0751960 | 0.810601 | 1.062720e-50 | -8.615850e-47 |
| Msa0374560 | Msa0758150 | 0.818050 | 2.399047e-52 | -8.615850e-47 |
| Msa0374560 | Msa0773960 | 0.816661 | 4.928125e-52 | -8.615850e-47 |
| Msa0374560 | Msa0787860 | 0.803027 | 4.240324e-49 | -8.615850e-47 |
| Msa0374560 | Msa0798840 | 0.820440 | 6.850118e-53 | -8.615850e-47 |
| Msa0374560 | Msa0799110 | 0.809066 | 2.273606e-50 | -8.615850e-47 |
| Msa0374560 | Msa0799120 | 0.816239 | 6.127071e-52 | -8.615850e-47 |
| Msa0374560 | Msa0803560 | 0.808182 | 3.511852e-50 | -8.615850e-47 |
| Msa0374560 | Msa0806930 | 0.813215 | 2.864776e-51 | -8.615850e-47 |
| Msa0374560 | Msa0812720 | 0.815974 | 7.020245e-52 | -8.615850e-47 |
| Msa0374560 | Msa0814160 | 0.831025 | 2.108916e-55 | -8.615850e-47 |
| Msa0374560 | Msa0816140 | 0.807969 | 3.898562e-50 | -8.615850e-47 |
| Msa0374560 | Msa0817100 | 0.803913 | 2.777779e-49 | -8.615850e-47 |
| Msa0374560 | Msa0824850 | 0.807688 | 4.472776e-50 | -8.615850e-47 |
| Msa0374560 | Msa0831890 | 0.812395 | 4.332808e-51 | -8.615850e-47 |
| Msa0374560 | Msa0851760 | 0.824526 | 7.696926e-54 | -8.615850e-47 |
| Msa0374560 | Msa0854230 | 0.801020 | 1.096267e-48 | -8.615850e-47 |
| Msa0374560 | Msa0854840 | 0.819676 | 1.025148e-52 | -8.615850e-47 |
| Msa0374560 | Msa0861730 | 0.800094 | 1.693484e-48 | -8.615850e-47 |
| Msa0374560 | Msa0864160 | 0.820996 | 5.106059e-53 | -8.615850e-47 |
| Msa0374560 | Msa0867080 | 0.801326 | 9.490305e-49 | -8.615850e-47 |
| Msa0374560 | Msa0869660 | 0.823621 | 1.255106e-53 | -8.615850e-47 |
| Msa0374560 | Msa0871420 | 0.800126 | 1.668016e-48 | -8.615850e-47 |
| Msa0374560 | Msa0873880 | 0.802899 | 4.507167e-49 | -8.615850e-47 |
| Msa0374560 | Msa0874750 | 0.800517 | 1.388598e-48 | -8.615850e-47 |
| Msa0374560 | Msa0896920 | 0.800454 | 1.430566e-48 | -8.615850e-47 |
| Msa0374560 | Msa0903020 | 0.819935 | 8.945143e-53 | -8.615850e-47 |
| Msa0374560 | Msa0910170 | 0.803357 | 3.623615e-49 | -8.615850e-47 |
| Msa0374560 | Msa0921860 | 0.803439 | 3.484169e-49 | -8.615850e-47 |
| Msa0374560 | Msa0932140 | 0.808591 | 2.872201e-50 | -8.615850e-47 |
| Msa0374560 | Msa0932150 | 0.808037 | 3.770611e-50 | -8.615850e-47 |
| Msa0374560 | Msa0950090 | 0.801458 | 8.921011e-49 | -8.615850e-47 |
| Msa0374560 | Msa0964510 | 0.811968 | 5.369564e-51 | -8.615850e-47 |
| Msa0374560 | Msa0970270 | 0.815053 | 1.125557e-51 | -8.615850e-47 |
| Msa0374560 | Msa0973770 | 0.822761 | 1.992944e-53 | -8.615850e-47 |
| Msa0374560 | Msa0987020 | 0.818295 | 2.111436e-52 | -8.615850e-47 |
| Msa0374560 | Msa1006170 | 0.802420 | 5.659084e-49 | -8.615850e-47 |
| Msa0374560 | Msa1007930 | 0.845559 | 3.765495e-59 | -8.615850e-47 |
| Msa0374560 | Msa1024420 | 0.802527 | 5.379000e-49 | -8.615850e-47 |
| Msa0374560 | Msa1029780 | 0.827127 | 1.856921e-54 | -8.615850e-47 |
| Msa0374560 | Msa1029820 | 0.812161 | 4.872657e-51 | -8.615850e-47 |
| Msa0374560 | Msa1029860 | 0.844902 | 5.670116e-59 | -8.615850e-47 |
| Msa0374560 | Msa1035050 | 0.804096 | 2.545302e-49 | -8.615850e-47 |
| Msa0374560 | Msa1040330 | 0.800097 | 1.690726e-48 | -8.615850e-47 |
| Msa0374560 | Msa1041250 | 0.818454 | 1.944190e-52 | -8.615850e-47 |
| Msa0374560 | Msa1041910 | 0.821099 | 4.832851e-53 | -8.615850e-47 |
| Msa0374560 | Msa1048390 | 0.808853 | 2.525647e-50 | -8.615850e-47 |
| Msa0374560 | Msa1049400 | 0.841167 | 5.600353e-58 | -8.615850e-47 |
| Msa0374560 | Msa1056890 | 0.801385 | 9.233815e-49 | -8.615850e-47 |
| Msa0374560 | Msa1062070 | 0.813796 | 2.134872e-51 | -8.615850e-47 |
| Msa0374560 | Msa1066150 | 0.824587 | 7.444401e-54 | -8.615850e-47 |
| Msa0374560 | Msa1068730 | 0.834861 | 2.345849e-56 | -8.615850e-47 |
| Msa0374560 | Msa1068940 | 0.805759 | 1.143262e-49 | -8.615850e-47 |
| Msa0374560 | Msa1071350 | 0.837257 | 5.782743e-57 | -8.615850e-47 |
| Msa0374560 | Msa1075030 | 0.800919 | 1.149739e-48 | -8.615850e-47 |
| Msa0374560 | Msa1075090 | 0.810526 | 1.103562e-50 | -8.615850e-47 |
| Msa0374560 | Msa1078300 | 0.804804 | 1.812204e-49 | -8.615850e-47 |
| Msa0374560 | Msa1085560 | 0.817392 | 3.376392e-52 | -8.615850e-47 |
| Msa0374560 | Msa1085820 | 0.803977 | 2.693910e-49 | -8.615850e-47 |
| Msa0374560 | Msa1099640 | 0.831459 | 1.649717e-55 | -8.615850e-47 |
| Msa0374560 | Msa1099650 | 0.844498 | 7.282210e-59 | -8.615850e-47 |
| Msa0374560 | Msa1103450 | 0.803859 | 2.851103e-49 | -8.615850e-47 |
| Msa0374560 | Msa1107520 | 0.800529 | 1.381211e-48 | -8.615850e-47 |
| Msa0374560 | Msa1108560 | 0.829627 | 4.629872e-55 | -8.615850e-47 |
| Msa0374560 | Msa1119670 | 0.804970 | 1.672508e-49 | -8.615850e-47 |
| Msa0374560 | Msa1120960 | 0.807874 | 4.084257e-50 | -8.615850e-47 |
| Msa0374560 | Msa1123010 | 0.809027 | 2.318124e-50 | -8.615850e-47 |
| Msa0374560 | Msa1124220 | 0.835869 | 1.305607e-56 | -8.615850e-47 |
| Msa0374560 | Msa1131120 | 0.800510 | 1.393024e-48 | -8.615850e-47 |
| Msa0374560 | Msa1131770 | 0.800818 | 1.205928e-48 | -8.615850e-47 |
| Msa0374560 | Msa1136050 | 0.800542 | 1.372590e-48 | -8.615850e-47 |
| Msa0374560 | Msa1136630 | 0.843437 | 1.402350e-58 | -8.615850e-47 |
| Msa0374560 | Msa1143250 | 0.805034 | 1.622206e-49 | -8.615850e-47 |
| Msa0374560 | Msa1147010 | 0.820545 | 6.483606e-53 | -8.615850e-47 |
| Msa0374560 | Msa1150750 | 0.803648 | 3.153762e-49 | -8.615850e-47 |
| Msa0374560 | Msa1156730 | 0.804219 | 2.399046e-49 | -8.615850e-47 |
| Msa0374560 | Msa1160540 | 0.826582 | 2.506899e-54 | -8.615850e-47 |
| Msa0374560 | Msa1167960 | 0.818623 | 1.779717e-52 | -8.615850e-47 |
| Msa0374560 | Msa1170340 | 0.803153 | 3.993327e-49 | -8.615850e-47 |
| Msa0374560 | Msa1181090 | 0.832247 | 1.053883e-55 | -8.615850e-47 |
| Msa0374560 | Msa1186260 | 0.804971 | 1.672012e-49 | -8.615850e-47 |
| Msa0374560 | Msa1201760 | 0.816844 | 4.484348e-52 | -8.615850e-47 |
| Msa0374560 | Msa1206330 | 0.802250 | 6.133372e-49 | -8.615850e-47 |
| Msa0374560 | Msa1206380 | 0.803365 | 3.609351e-49 | -8.615850e-47 |
| Msa0374560 | Msa1220720 | 0.804766 | 1.844889e-49 | -8.615850e-47 |
| Msa0374560 | Msa1223960 | 0.819200 | 1.315753e-52 | -8.615850e-47 |
| Msa0374560 | Msa1223990 | 0.826715 | 2.330297e-54 | -8.615850e-47 |
| Msa0374560 | Msa1240710 | 0.803423 | 3.511317e-49 | -8.615850e-47 |
| Msa0374560 | Msa1254670 | 0.812583 | 3.942118e-51 | -8.615850e-47 |
| Msa0374560 | Msa1259570 | 0.806083 | 9.770660e-50 | -8.615850e-47 |
| Msa0374560 | Msa1263110 | 0.840034 | 1.108587e-57 | -8.615850e-47 |
| Msa0374560 | Msa1263120 | 0.818795 | 1.626385e-52 | -8.615850e-47 |
| Msa0374560 | Msa1265570 | 0.811082 | 8.365434e-51 | -8.615850e-47 |
| Msa0374560 | Msa1269500 | 0.815959 | 7.075004e-52 | -8.615850e-47 |
| Msa0374560 | Msa1273320 | 0.817750 | 2.805129e-52 | -8.615850e-47 |
| Msa0374560 | Msa1280540 | 0.817145 | 3.837410e-52 | -8.615850e-47 |
| Msa0374560 | Msa1281650 | 0.801982 | 6.963567e-49 | -8.615850e-47 |
| Msa0374560 | Msa1284020 | 0.800837 | 1.194872e-48 | -8.615850e-47 |
| Msa0374560 | Msa1319010 | 0.802992 | 4.311685e-49 | -8.615850e-47 |
| Msa0374560 | Msa1322500 | 0.816782 | 4.630232e-52 | -8.615850e-47 |
| Msa0374560 | Msa1334670 | 0.813925 | 1.999525e-51 | -8.615850e-47 |
| Msa0374560 | Msa1338510 | 0.808347 | 3.238597e-50 | -8.615850e-47 |
| Msa0374560 | Msa1343590 | 0.815397 | 9.439102e-52 | -8.615850e-47 |
| Msa0374560 | Msa1357840 | 0.801286 | 9.673418e-49 | -8.615850e-47 |
| Msa0374560 | Msa1361980 | 0.811642 | 6.322658e-51 | -8.615850e-47 |
| Msa0374560 | Msa1364690 | 0.827180 | 1.804201e-54 | -8.615850e-47 |
| Msa0374560 | Msa1365230 | 0.812449 | 4.217043e-51 | -8.615850e-47 |
| Msa0374560 | Msa1366480 | 0.802411 | 5.683385e-49 | -8.615850e-47 |
| Msa0374560 | Msa1368420 | 0.827973 | 1.163847e-54 | -8.615850e-47 |
| Msa0374560 | Msa1378950 | 0.810614 | 1.056207e-50 | -8.615850e-47 |
| Msa0374560 | Msa1383220 | 0.826694 | 2.357218e-54 | -8.615850e-47 |
| Msa0374560 | Msa1395720 | 0.803015 | 4.265140e-49 | -8.615850e-47 |
| Msa0374560 | Msa1407810 | 0.818861 | 1.571709e-52 | -8.615850e-47 |
| Msa0374560 | Msa1417220 | 0.826642 | 2.425542e-54 | -8.615850e-47 |
| Msa0374560 | Msa1421540 | 0.811338 | 7.358234e-51 | -8.615850e-47 |
| Msa0374560 | Msa1433360 | 0.800558 | 1.362435e-48 | -8.615850e-47 |
| Msa0374560 | Msa1434700 | 0.819880 | 9.205470e-53 | -8.615850e-47 |
| Msa0374560 | Msa1437590 | 0.810001 | 1.431614e-50 | -8.615850e-47 |
| Msa0374560 | Msa1437780 | 0.818605 | 1.796752e-52 | -8.615850e-47 |
| Msa0374560 | Msa1458270 | 0.821289 | 4.370530e-53 | -8.615850e-47 |
| Msa0240580 | Msa0374560 | 0.802122 | 6.516179e-49 | -8.615850e-47 |
| Msa0244310 | Msa0374560 | 0.806015 | 1.010105e-49 | -8.615850e-47 |
| Msa0258010 | Msa0374560 | 0.800111 | 1.680137e-48 | -8.615850e-47 |
| Msa0278460 | Msa0374560 | 0.808425 | 3.116738e-50 | -8.615850e-47 |
| Msa0278960 | Msa0374560 | 0.821328 | 4.280075e-53 | -8.615850e-47 |
| Msa0279810 | Msa0374560 | 0.825735 | 3.986675e-54 | -8.615850e-47 |
| Msa0282830 | Msa0374560 | 0.821979 | 3.026507e-53 | -8.615850e-47 |
| Msa0285420 | Msa0374560 | 0.802321 | 5.929454e-49 | -8.615850e-47 |
| Msa0290800 | Msa0374560 | 0.800835 | 1.195952e-48 | -8.615850e-47 |
| Msa0298000 | Msa0374560 | 0.810331 | 1.215645e-50 | -8.615850e-47 |
| Msa0299030 | Msa0374560 | 0.802409 | 5.688943e-49 | -8.615850e-47 |
| Msa0319220 | Msa0374560 | 0.825545 | 4.422465e-54 | -8.615850e-47 |
| Msa0321240 | Msa0374560 | 0.833868 | 4.165320e-56 | -8.615850e-47 |
| Msa0328090 | Msa0374560 | 0.807974 | 3.888563e-50 | -8.615850e-47 |
| Msa0328870 | Msa0374560 | 0.807313 | 5.372432e-50 | -8.615850e-47 |
| Msa0333770 | Msa0374560 | 0.818637 | 1.767051e-52 | -8.615850e-47 |
| Msa0345050 | Msa0374560 | 0.821996 | 3.000069e-53 | -8.615850e-47 |
| Msa0349910 | Msa0374560 | 0.815296 | 9.940762e-52 | -8.615850e-47 |
| Msa0354600 | Msa0374560 | 0.816461 | 5.465696e-52 | -8.615850e-47 |
| Msa0354670 | Msa0374560 | 0.841674 | 4.116656e-58 | -8.615850e-47 |
| Msa0356270 | Msa0374560 | 0.802731 | 4.882314e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374560 | MtrunA17_Chr3g0124931 | 96.838 | 506 | 16 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1038 |
| Msa0374560 | MtrunA17_Chr3g0130721 | 64.567 | 508 | 176 | 3 | 3 | 506 | 2 | 509 | 0.0 | 691 |
| Msa0374560 | MtrunA17_Chr2g0330291 | 53.785 | 502 | 211 | 8 | 18 | 506 | 21 | 514 | 0.0 | 535 |
| Msa0374560 | MtrunA17_Chr3g0145581 | 50.682 | 513 | 239 | 5 | 7 | 506 | 9 | 520 | 0.0 | 535 |
| Msa0374560 | MtrunA17_Chr8g0342001 | 52.930 | 512 | 221 | 7 | 8 | 506 | 7 | 511 | 0.0 | 531 |
| Msa0374560 | MtrunA17_Chr2g0326481 | 52.778 | 504 | 228 | 6 | 12 | 508 | 8 | 508 | 0.0 | 531 |
| Msa0374560 | MtrunA17_Chr1g0155701 | 53.878 | 490 | 213 | 7 | 26 | 506 | 29 | 514 | 2.76e-180 | 524 |
| Msa0374560 | MtrunA17_Chr2g0299161 | 53.606 | 513 | 218 | 11 | 6 | 506 | 9 | 513 | 4.19e-180 | 523 |
| Msa0374560 | MtrunA17_Chr8g0372421 | 53.021 | 513 | 223 | 11 | 5 | 506 | 9 | 514 | 6.42e-179 | 524 |
| Msa0374560 | MtrunA17_Chr4g0037031 | 50.000 | 506 | 242 | 5 | 13 | 508 | 23 | 527 | 2.27e-178 | 522 |
| Msa0374560 | MtrunA17_Chr4g0029301 | 52.277 | 505 | 226 | 7 | 11 | 506 | 15 | 513 | 1.32e-177 | 520 |
| Msa0374560 | MtrunA17_Chr5g0404841 | 52.816 | 515 | 218 | 9 | 6 | 506 | 8 | 511 | 3.90e-177 | 519 |
| Msa0374560 | MtrunA17_Chr3g0142001 | 53.737 | 495 | 206 | 9 | 26 | 506 | 28 | 513 | 8.31e-177 | 515 |
| Msa0374560 | MtrunA17_Chr1g0152571 | 53.586 | 502 | 212 | 12 | 18 | 506 | 24 | 517 | 2.65e-175 | 511 |
| Msa0374560 | MtrunA17_Chr2g0326491 | 49.035 | 518 | 212 | 7 | 11 | 478 | 7 | 522 | 3.74e-171 | 493 |
| Msa0374560 | MtrunA17_Chr3g0130711 | 50.586 | 512 | 234 | 8 | 7 | 501 | 5 | 514 | 4.81e-163 | 480 |
| Msa0374560 | MtrunA17_Chr2g0301001 | 47.515 | 503 | 252 | 8 | 16 | 508 | 17 | 517 | 3.41e-158 | 470 |
| Msa0374560 | MtrunA17_Chr8g0378221 | 45.611 | 524 | 241 | 8 | 25 | 506 | 49 | 570 | 7.23e-153 | 459 |
| Msa0374560 | MtrunA17_Chr3g0077531 | 46.139 | 505 | 257 | 9 | 11 | 506 | 15 | 513 | 6.02e-148 | 441 |
| Msa0374560 | MtrunA17_Chr5g0406921 | 46.843 | 491 | 249 | 9 | 26 | 506 | 28 | 516 | 1.25e-144 | 435 |
| Msa0374560 | MtrunA17_Chr5g0408371 | 47.746 | 488 | 238 | 10 | 26 | 501 | 28 | 510 | 3.59e-143 | 432 |
| Msa0374560 | MtrunA17_Chr2g0326441 | 59.011 | 283 | 114 | 1 | 11 | 293 | 7 | 287 | 1.03e-120 | 356 |
| Msa0374560 | MtrunA17_Chr5g0405781 | 41.743 | 218 | 100 | 2 | 145 | 362 | 21 | 211 | 4.23e-50 | 175 |
| Msa0374560 | MtrunA17_Chr2g0326451 | 40.404 | 198 | 103 | 4 | 323 | 508 | 25 | 219 | 4.46e-34 | 135 |
| Msa0374560 | MtrunA17_Chr4g0071291 | 36.970 | 165 | 63 | 3 | 25 | 186 | 21 | 147 | 1.07e-25 | 102 |
| Msa0374560 | MtrunA17_Chr8g0372581 | 41.135 | 141 | 62 | 3 | 147 | 287 | 9 | 128 | 4.88e-24 | 97.8 |
| Msa0374560 | MtrunA17_Chr2g0330191 | 29.254 | 335 | 195 | 9 | 42 | 345 | 70 | 393 | 5.93e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374560 | AT1G77410.1 | 61.876 | 501 | 186 | 3 | 10 | 506 | 6 | 505 | 0.0 | 671 |
| Msa0374560 | AT1G77410.3 | 61.265 | 506 | 186 | 4 | 10 | 506 | 6 | 510 | 0.0 | 664 |
| Msa0374560 | AT5G63800.1 | 60.878 | 501 | 195 | 1 | 7 | 506 | 13 | 513 | 0.0 | 659 |
| Msa0374560 | AT3G13750.1 | 53.801 | 513 | 211 | 8 | 7 | 506 | 21 | 520 | 0.0 | 543 |
| Msa0374560 | AT4G26140.8 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.9 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.7 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.1 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.6 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.4 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.5 | 54.331 | 508 | 219 | 8 | 7 | 506 | 11 | 513 | 0.0 | 541 |
| Msa0374560 | AT4G26140.3 | 54.331 | 508 | 217 | 8 | 7 | 506 | 11 | 511 | 0.0 | 538 |
| Msa0374560 | AT4G26140.2 | 54.331 | 508 | 217 | 8 | 7 | 506 | 11 | 511 | 0.0 | 538 |
| Msa0374560 | AT4G35010.1 | 51.837 | 490 | 225 | 5 | 26 | 506 | 41 | 528 | 0.0 | 533 |
| Msa0374560 | AT2G16730.1 | 51.016 | 492 | 226 | 5 | 26 | 506 | 44 | 531 | 0.0 | 531 |
| Msa0374560 | AT5G56870.1 | 53.398 | 515 | 211 | 9 | 8 | 506 | 11 | 512 | 0.0 | 528 |
| Msa0374560 | AT3G52840.1 | 52.259 | 509 | 228 | 7 | 7 | 506 | 10 | 512 | 1.47e-179 | 522 |
| Msa0374560 | AT3G52840.2 | 52.259 | 509 | 228 | 7 | 7 | 506 | 64 | 566 | 5.45e-179 | 522 |
| Msa0374560 | AT2G28470.5 | 52.811 | 498 | 217 | 8 | 25 | 506 | 31 | 526 | 4.58e-178 | 517 |
| Msa0374560 | AT4G36360.1 | 52.335 | 514 | 220 | 9 | 7 | 506 | 17 | 519 | 9.45e-178 | 521 |
| Msa0374560 | AT4G36360.2 | 52.335 | 514 | 220 | 9 | 7 | 506 | 17 | 519 | 1.23e-177 | 521 |
| Msa0374560 | AT2G28470.2 | 52.811 | 498 | 217 | 8 | 25 | 506 | 25 | 520 | 4.29e-176 | 517 |
| Msa0374560 | AT2G28470.4 | 52.811 | 498 | 217 | 8 | 25 | 506 | 25 | 520 | 4.29e-176 | 517 |
| Msa0374560 | AT2G28470.1 | 52.811 | 498 | 217 | 8 | 25 | 506 | 31 | 526 | 6.21e-176 | 517 |
| Msa0374560 | AT2G28470.3 | 52.811 | 498 | 217 | 8 | 25 | 506 | 31 | 526 | 6.21e-176 | 517 |
| Msa0374560 | AT1G77410.2 | 61.518 | 382 | 145 | 2 | 126 | 506 | 19 | 399 | 3.25e-175 | 510 |
| Msa0374560 | AT1G77410.4 | 61.518 | 382 | 145 | 2 | 126 | 506 | 19 | 399 | 3.25e-175 | 510 |
| Msa0374560 | AT1G45130.1 | 50.778 | 514 | 229 | 10 | 7 | 506 | 14 | 517 | 5.70e-171 | 500 |
| Msa0374560 | AT5G63810.1 | 48.413 | 504 | 248 | 6 | 8 | 501 | 14 | 515 | 1.30e-165 | 487 |
| Msa0374560 | AT4G38590.1 | 48.596 | 463 | 223 | 6 | 56 | 507 | 1 | 459 | 3.13e-158 | 470 |
| Msa0374560 | AT1G31740.1 | 46.809 | 517 | 250 | 9 | 7 | 508 | 7 | 513 | 4.55e-158 | 469 |
| Msa0374560 | AT2G32810.2 | 46.111 | 540 | 251 | 10 | 5 | 506 | 12 | 549 | 5.39e-158 | 471 |
| Msa0374560 | AT2G32810.1 | 46.111 | 540 | 251 | 10 | 5 | 506 | 12 | 549 | 1.27e-157 | 471 |
| Msa0374560 | AT4G38590.2 | 44.933 | 523 | 262 | 8 | 6 | 507 | 6 | 523 | 1.62e-154 | 468 |
| Msa0374560 | AT5G20710.1 | 45.029 | 513 | 273 | 6 | 1 | 506 | 3 | 513 | 3.56e-152 | 455 |
| Msa0374560 | AT1G45130.2 | 48.848 | 434 | 200 | 9 | 87 | 506 | 13 | 438 | 4.98e-132 | 398 |
| Msa0374560 | AT5G20710.2 | 37.419 | 310 | 185 | 6 | 204 | 506 | 1 | 308 | 1.63e-63 | 218 |
| Msa0374560 | AT2G04062.1 | 40.462 | 173 | 82 | 2 | 26 | 198 | 7 | 158 | 6.03e-39 | 139 |
| Msa0374560 | AT1G72990.3 | 28.967 | 397 | 238 | 9 | 36 | 402 | 18 | 400 | 2.38e-33 | 134 |
| Msa0374560 | AT1G72990.1 | 28.967 | 397 | 238 | 9 | 36 | 402 | 73 | 455 | 2.80e-33 | 134 |
| Msa0374560 | AT1G72990.4 | 28.967 | 397 | 238 | 9 | 36 | 402 | 73 | 455 | 2.80e-33 | 134 |
| Msa0374560 | AT1G72990.2 | 28.256 | 407 | 241 | 10 | 33 | 402 | 1 | 393 | 8.62e-30 | 124 |
| Msa0374560 | AT2G04060.1 | 33.484 | 221 | 104 | 5 | 293 | 508 | 23 | 205 | 1.91e-26 | 112 |
Find 121 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAGTATCGGCAAAATT+AGG | 0.136464 | 3_1:-74024574 | None:intergenic |
| CACAGAATGTGCTGCCTTCT+TGG | 0.153848 | 3_1:+74024173 | Msa0374560:CDS |
| TTTCATCATGTTGACTATTT+TGG | 0.164006 | 3_1:-74022785 | None:intergenic |
| GCAATGTGGGAGAAACTTTA+AGG | 0.207416 | 3_1:+74023283 | Msa0374560:CDS |
| ACTATATGTGGTACACTTTC+AGG | 0.210126 | 3_1:+74024647 | Msa0374560:CDS |
| TCATACAAACTTACGTGTTT+TGG | 0.226139 | 3_1:+74021992 | Msa0374560:CDS |
| AGTTCAATTCAGCTGAAAAT+TGG | 0.226601 | 3_1:+74024530 | Msa0374560:CDS |
| TCCTTAAGATGTCCCCATTT+TGG | 0.231023 | 3_1:-74023868 | None:intergenic |
| GACATCTAATCCTCCTTCTT+TGG | 0.263463 | 3_1:-74021971 | None:intergenic |
| TTTGAAGTCCCACGGCCATT+TGG | 0.264333 | 3_1:-74023017 | None:intergenic |
| GTTTGGTTAGACAACCAAAA+TGG | 0.279707 | 3_1:+74023854 | Msa0374560:CDS |
| TAATCCTCCTTCTTTGGCTT+TGG | 0.297718 | 3_1:-74021965 | None:intergenic |
| TATGAACAAGGCAACATTAT+AGG | 0.308128 | 3_1:-74023536 | None:intergenic |
| ATTAATAGTTTACAAGCTTT+TGG | 0.309185 | 3_1:+74023478 | Msa0374560:intron |
| ATTGAGAGTGAATGCACTTA+TGG | 0.315012 | 3_1:+74022442 | Msa0374560:CDS |
| TTGAAGTCCCACGGCCATTT+GGG | 0.331347 | 3_1:-74023016 | None:intergenic |
| CTAAGAACAGATTGTGCATT+AGG | 0.335456 | 3_1:-74024805 | None:intergenic |
| TTGAAGTATCGGCAAAATTA+GGG | 0.337323 | 3_1:-74024573 | None:intergenic |
| GAAGGCTTGTTAGGAGAGTT+TGG | 0.344500 | 3_1:-74023308 | None:intergenic |
| TTGGGCAGCCCAACGAATAT+AGG | 0.344539 | 3_1:-74022998 | None:intergenic |
| ACCAAAATGGGGACATCTTA+AGG | 0.354053 | 3_1:+74023867 | Msa0374560:CDS |
| CAAAGTAAGTTTCGAGAGAA+TGG | 0.355862 | 3_1:+74022970 | Msa0374560:CDS |
| TCACTTCTAAATACAATTCC+AGG | 0.376793 | 3_1:-74022627 | None:intergenic |
| TAATTGTGGTTTCATTGCTC+TGG | 0.381958 | 3_1:-74024506 | None:intergenic |
| GCTGTAGGGGTCTACCATTA+TGG | 0.382065 | 3_1:+74022592 | Msa0374560:intron |
| AATATTTCGTATGAATTGCC+TGG | 0.387602 | 3_1:+74024234 | Msa0374560:CDS |
| TGTTGGTGAAATCAAAATCA+TGG | 0.389952 | 3_1:+74020021 | Msa0374560:exon |
| ATGTAGATTGAGAATGAATA+TGG | 0.390011 | 3_1:+74022940 | Msa0374560:intron |
| TAGTGGAAGGTTTGATTTAG+TGG | 0.394049 | 3_1:+74022360 | Msa0374560:CDS |
| TGTTCACAACCTCTACTTGA+TGG | 0.396063 | 3_1:+74023913 | Msa0374560:CDS |
| CTTCTGCAGTATGAGTTTAG+TGG | 0.397314 | 3_1:+74022343 | Msa0374560:intron |
| TATTCGTTGGGCTGCCCAAA+TGG | 0.400359 | 3_1:+74023002 | Msa0374560:CDS |
| GTCCATAGTGAAGGCTTGTT+AGG | 0.404534 | 3_1:-74023317 | None:intergenic |
| TTATATGTGACCCTTCGAAT+TGG | 0.404622 | 3_1:+74022412 | Msa0374560:CDS |
| TTTGGTTAGACAACCAAAAT+GGG | 0.416446 | 3_1:+74023855 | Msa0374560:CDS |
| CTTCACTATGGACAGAGAAT+TGG | 0.420589 | 3_1:+74023327 | Msa0374560:CDS |
| TGGGCAGCCCAACGAATATA+GGG | 0.423176 | 3_1:-74022997 | None:intergenic |
| TTATGGTTACATGATGTTCC+TGG | 0.429910 | 3_1:+74022609 | Msa0374560:CDS |
| GAAAGACTGACCACTGGATC+AGG | 0.433772 | 3_1:-74023078 | None:intergenic |
| TTGAGAGTGAATGCACTTAT+GGG | 0.439807 | 3_1:+74022443 | Msa0374560:CDS |
| CTCCTAACAAGCCTTCACTA+TGG | 0.444788 | 3_1:+74023315 | Msa0374560:CDS |
| TTGGGCTGCCCAAATGGCCG+TGG | 0.445681 | 3_1:+74023008 | Msa0374560:CDS |
| GAGGCTCCACTGGATGAATA+TGG | 0.446906 | 3_1:+74023750 | Msa0374560:CDS |
| AATTGGATTGTTACATCCCT+AGG | 0.447987 | 3_1:-74024207 | None:intergenic |
| TAAACCTGGGATAGTATGAT+AGG | 0.451854 | 3_1:-74022838 | None:intergenic |
| TGGGTTGCCCTATATTCGTT+GGG | 0.460338 | 3_1:+74022990 | Msa0374560:CDS |
| CATCATAAAATCCTCTTCTC+TGG | 0.461766 | 3_1:+74020151 | Msa0374560:CDS |
| GGAACATCATGTAACCATAA+TGG | 0.461861 | 3_1:-74022606 | None:intergenic |
| TCTGAAGCTGATCTCAAGTA+TGG | 0.472062 | 3_1:-74023508 | None:intergenic |
| AAAGTAAGTTTCGAGAGAAT+GGG | 0.472636 | 3_1:+74022971 | Msa0374560:CDS |
| ATGGGTTGCCCTATATTCGT+TGG | 0.474004 | 3_1:+74022989 | Msa0374560:CDS |
| TTAATTTCCAAAGCCAAAGA+AGG | 0.474275 | 3_1:+74021958 | Msa0374560:CDS |
| GACTTCAAACCGGTGTGCCT+TGG | 0.476862 | 3_1:+74023031 | Msa0374560:CDS |
| GTGCATTCACTCTCAATGTA+TGG | 0.478471 | 3_1:-74022436 | None:intergenic |
| TTGGCTTTGGAAATTAAGTC+AGG | 0.481878 | 3_1:-74021952 | None:intergenic |
| AGAACATCGTTGGTCATTAA+CGG | 0.485783 | 3_1:+74020127 | Msa0374560:CDS |
| GTTGGTGAAATCAAAATCAT+GGG | 0.486532 | 3_1:+74020022 | Msa0374560:exon |
| CAATGTGGGAGAAACTTTAA+GGG | 0.489483 | 3_1:+74023284 | Msa0374560:CDS |
| AGTGGAAGGTTTGATTTAGT+GGG | 0.498332 | 3_1:+74022361 | Msa0374560:CDS |
| ATTAAAGAAATTCAAGCTCA+AGG | 0.500012 | 3_1:+74022388 | Msa0374560:CDS |
| AAGTGATAATGATCAATTCA+AGG | 0.504392 | 3_1:+74022644 | Msa0374560:CDS |
| GCTGCCTTCTTGGAAAATAG+TGG | 0.505645 | 3_1:+74024183 | Msa0374560:CDS |
| GCCTTGTTCATAGCAAAGAA+AGG | 0.509544 | 3_1:+74023547 | Msa0374560:CDS |
| TTATTATGATGAGGCTCCAC+TGG | 0.510643 | 3_1:+74023740 | Msa0374560:CDS |
| ATGGCCGTGGGACTTCAAAC+CGG | 0.524566 | 3_1:+74023021 | Msa0374560:CDS |
| CTATCCTCGTAGCACTCCTC+AGG | 0.528740 | 3_1:+74020183 | Msa0374560:CDS |
| AAGACTACATTCTTGCAGCC+TGG | 0.529766 | 3_1:-74024276 | None:intergenic |
| CTACATTCTTGCAGCCTGGT+AGG | 0.536592 | 3_1:-74024272 | None:intergenic |
| CTTGGAAAATAGTGGACCTA+GGG | 0.539564 | 3_1:+74024191 | Msa0374560:CDS |
| GTGTCTCTTTGCACCGTCCA+TGG | 0.539794 | 3_1:+74020085 | Msa0374560:CDS |
| TCACGAGCCTCAACAAGGCC+AGG | 0.541047 | 3_1:+74022020 | Msa0374560:CDS |
| CAATGTATGGTCCAATTCGA+AGG | 0.542390 | 3_1:-74022423 | None:intergenic |
| AGGATACTCATTGATTTCCC+AGG | 0.544978 | 3_1:-74024252 | None:intergenic |
| AAGATACATCTGACTATATG+TGG | 0.549097 | 3_1:+74024635 | Msa0374560:CDS |
| ATATTTCGTATGAATTGCCT+GGG | 0.552300 | 3_1:+74024235 | Msa0374560:CDS |
| AGGACCTATCATACTATCCC+AGG | 0.553587 | 3_1:+74022834 | Msa0374560:CDS |
| CAAGAAGGCAGCACATTCTG+TGG | 0.556669 | 3_1:-74024172 | None:intergenic |
| AAGTTATGTCAATTATTACA+TGG | 0.562787 | 3_1:+74023570 | Msa0374560:CDS |
| TCCTTTCTTTGCTATGAACA+AGG | 0.565995 | 3_1:-74023548 | None:intergenic |
| AAGAATGTAGTCTTCAACAC+CGG | 0.567336 | 3_1:+74024285 | Msa0374560:CDS |
| GCTGAATTGAACTTTAATTG+TGG | 0.567491 | 3_1:-74024520 | None:intergenic |
| TCTTGGAAAATAGTGGACCT+AGG | 0.570208 | 3_1:+74024190 | Msa0374560:CDS |
| CTGTGAGCCTAAGCTGAAGG+TGG | 0.573454 | 3_1:-74023944 | None:intergenic |
| TGGGCTGCCCAAATGGCCGT+GGG | 0.573977 | 3_1:+74023009 | Msa0374560:CDS |
| CATGCAATGGCATGCAATGT+GGG | 0.574956 | 3_1:+74023270 | Msa0374560:CDS |
| ACTCAAACCACCTTCAGCTT+AGG | 0.578526 | 3_1:+74023937 | Msa0374560:CDS |
| TATCAAAATTAGTTCCTCCA+TGG | 0.578938 | 3_1:-74023689 | None:intergenic |
| ACGAATTTGATGCAGTACCA+TGG | 0.579385 | 3_1:+74023672 | Msa0374560:intron |
| CGTAGGTAACATTGCCACCA+TGG | 0.581586 | 3_1:-74020102 | None:intergenic |
| TGCAGTATGAGTTTAGTGGA+AGG | 0.589406 | 3_1:+74022347 | Msa0374560:intron |
| GGTAACATTGCCACCATGGA+CGG | 0.589509 | 3_1:-74020098 | None:intergenic |
| ATTTCCAAAGCCAAAGAAGG+AGG | 0.589753 | 3_1:+74021961 | Msa0374560:CDS |
| CAATTCTCTGTCCATAGTGA+AGG | 0.589841 | 3_1:-74023326 | None:intergenic |
| GAGGTTACCTGGCCTTGTTG+AGG | 0.591838 | 3_1:-74022027 | None:intergenic |
| GTTTGAGTTCCATCAAGTAG+AGG | 0.592892 | 3_1:-74023922 | None:intergenic |
| TACCTACGACAGAACATCGT+TGG | 0.596916 | 3_1:+74020117 | Msa0374560:CDS |
| TTGCTGTGAGCCTAAGCTGA+AGG | 0.597462 | 3_1:-74023947 | None:intergenic |
| ATGCAGATCAACGCATGCAA+TGG | 0.599303 | 3_1:+74023257 | Msa0374560:intron |
| AATAACAGCTTATTATGATG+AGG | 0.614024 | 3_1:+74023731 | Msa0374560:CDS |
| TCTTGTTTACACATCATCCA+AGG | 0.616222 | 3_1:-74023048 | None:intergenic |
| ACCATACCATATTCATCCAG+TGG | 0.618114 | 3_1:-74023756 | None:intergenic |
| GTTCTTAGTATATACAGTCA+AGG | 0.620590 | 3_1:+74024820 | Msa0374560:CDS |
| AGTGAATTGAACCAGAGAAG+AGG | 0.633803 | 3_1:-74020162 | None:intergenic |
| AGCTGTTATTATGAAAGCAG+AGG | 0.636343 | 3_1:-74023718 | None:intergenic |
| AGTATCGGCAAAATTAGGGA+TGG | 0.638859 | 3_1:-74024569 | None:intergenic |
| AAATCAAAATCATGGGAGAG+TGG | 0.642102 | 3_1:+74020029 | Msa0374560:exon |
| AATGTATGGTCCAATTCGAA+GGG | 0.643269 | 3_1:-74022422 | None:intergenic |
| TGTAGTCTTCAACACCGGCA+AGG | 0.643630 | 3_1:+74024290 | Msa0374560:CDS |
| CACACCGGTTTGAAGTCCCA+CGG | 0.651964 | 3_1:-74023025 | None:intergenic |
| AGATGATGCTCCTGATCCAG+TGG | 0.653215 | 3_1:+74023068 | Msa0374560:CDS |
| AATCTTCACGAGCCTCAACA+AGG | 0.655545 | 3_1:+74022015 | Msa0374560:CDS |
| ACACATCATCCAAGGCACAC+CGG | 0.656038 | 3_1:-74023040 | None:intergenic |
| GACCAACGATGTTCTGTCGT+AGG | 0.656925 | 3_1:-74020119 | None:intergenic |
| GCATGCAATGGCATGCAATG+TGG | 0.659047 | 3_1:+74023269 | Msa0374560:CDS |
| AAATCAATGAGTATCCTACC+AGG | 0.665635 | 3_1:+74024258 | Msa0374560:CDS |
| TCAAAATCATGGGAGAGTGG+TGG | 0.675828 | 3_1:+74020032 | Msa0374560:exon |
| TTGGTTAGACAACCAAAATG+GGG | 0.683195 | 3_1:+74023856 | Msa0374560:CDS |
| TCTCTTTGCACCGTCCATGG+TGG | 0.685695 | 3_1:+74020088 | Msa0374560:CDS |
| AATGTGGGAGAAACTTTAAG+GGG | 0.688593 | 3_1:+74023285 | Msa0374560:CDS |
| AATTTGATGCAGTACCATGG+AGG | 0.742597 | 3_1:+74023675 | Msa0374560:intron |
| CGTACCTGAGGAGTGCTACG+AGG | 0.747266 | 3_1:-74020187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAATTAAATAATAT+TGG | - | chr3_1:74021367-74021386 | None:intergenic | 0.0% |
| !!! | AAGTTTTTTTTTTTTTTTTG+AGG | + | chr3_1:74020304-74020323 | Msa0374560:intron | 10.0% |
| !! | TCATATATGATTAATAAATT+TGG | + | chr3_1:74020753-74020772 | Msa0374560:intron | 10.0% |
| !! | TATTAGTTAAACTATATTAT+CGG | + | chr3_1:74021225-74021244 | Msa0374560:intron | 10.0% |
| !! | AAATAATTAAATAATATTGG+AGG | - | chr3_1:74021364-74021383 | None:intergenic | 10.0% |
| !! | TCACATATGAAAAATAAATT+TGG | + | chr3_1:74020650-74020669 | Msa0374560:intron | 15.0% |
| !! | GTATACTTCATAAATAAAAT+TGG | - | chr3_1:74020985-74021004 | None:intergenic | 15.0% |
| !! | ATTAGTTAAACTATATTATC+GGG | + | chr3_1:74021226-74021245 | Msa0374560:intron | 15.0% |
| !! | TGATATATATAACTAACAAT+TGG | - | chr3_1:74021265-74021284 | None:intergenic | 15.0% |
| !! | CGATATTATTAATTAAGATT+AGG | + | chr3_1:74021301-74021320 | Msa0374560:intron | 15.0% |
| !! | AAGGAAAAAAAAACTTTATA+AGG | + | chr3_1:74021427-74021446 | Msa0374560:intron | 15.0% |
| !! | AGGAAAAAAAAACTTTATAA+GGG | + | chr3_1:74021428-74021447 | Msa0374560:intron | 15.0% |
| !!! | TTACATAATTTGTATGAATT+TGG | + | chr3_1:74021809-74021828 | Msa0374560:intron | 15.0% |
| !!! | ATATTTGAAATTGTTTTTGT+TGG | + | chr3_1:74022894-74022913 | Msa0374560:intron | 15.0% |
| !!! | TTATTGTATGTTTTTAAAGC+TGG | + | chr3_1:74020396-74020415 | Msa0374560:intron | 20.0% |
| !! | GTTATATTTCTTACCTAATA+AGG | - | chr3_1:74020498-74020517 | None:intergenic | 20.0% |
| !!! | GTTTTATAATTCATTCAAGA+TGG | - | chr3_1:74020533-74020552 | None:intergenic | 20.0% |
| !!! | TTCTTATGTTTTATCATTGA+TGG | + | chr3_1:74021043-74021062 | Msa0374560:intron | 20.0% |
| !!! | CTAATTTTATATGTTTCACA+TGG | + | chr3_1:74021104-74021123 | Msa0374560:intron | 20.0% |
| !! | AATTAAAAACTCTTTCTCAA+GGG | - | chr3_1:74021135-74021154 | None:intergenic | 20.0% |
| !! | TAATTAAAAACTCTTTCTCA+AGG | - | chr3_1:74021136-74021155 | None:intergenic | 20.0% |
| !! | ATTCACATAATTTCAGAAAA+AGG | - | chr3_1:74021192-74021211 | None:intergenic | 20.0% |
| !! | TTAGTTAAACTATATTATCG+GGG | + | chr3_1:74021227-74021246 | Msa0374560:intron | 20.0% |
| !!! | TCATCTTTTTCTATAAAAGA+AGG | + | chr3_1:74021616-74021635 | Msa0374560:intron | 20.0% |
| !!! | ATTTTTAAGTAATACTCGAT+TGG | - | chr3_1:74021672-74021691 | None:intergenic | 20.0% |
| !! | CAAATTATCTTGATATATGT+AGG | + | chr3_1:74021758-74021777 | Msa0374560:intron | 20.0% |
| !!! | GTCATTTTGAAGAATTATTT+CGG | - | chr3_1:74021786-74021805 | None:intergenic | 20.0% |
| !! | ATGCATAATGACATAAATAT+TGG | - | chr3_1:74021875-74021894 | None:intergenic | 20.0% |
| !! | TTGTCAAAAAAAAAAATGCA+TGG | + | chr3_1:74022303-74022322 | Msa0374560:intron | 20.0% |
| !! | TATTTGGTATGAATATTGAA+TGG | - | chr3_1:74022528-74022547 | None:intergenic | 20.0% |
| !! | AACAATTTCAAATATTGTAC+TGG | - | chr3_1:74022889-74022908 | None:intergenic | 20.0% |
| !!! | CTTTCAAGTATTATTTATCA+TGG | + | chr3_1:74023096-74023115 | Msa0374560:intron | 20.0% |
| !!! | TAAAAGAAAAACTGCAATTT+TGG | - | chr3_1:74023393-74023412 | None:intergenic | 20.0% |
| !!! | ATTAATAGTTTACAAGCTTT+TGG | + | chr3_1:74023478-74023497 | Msa0374560:intron | 20.0% |
| !! | AAGTTATGTCAATTATTACA+TGG | + | chr3_1:74023570-74023589 | Msa0374560:CDS | 20.0% |
| !! | AGTACTAGTTAAAAAAATTG+CGG | - | chr3_1:74024009-74024028 | None:intergenic | 20.0% |
| !! | ACTAGTACTACTTAAATAAA+AGG | + | chr3_1:74024020-74024039 | Msa0374560:intron | 20.0% |
| !!! | CATACGAAATATTTTGAAAT+TGG | - | chr3_1:74024227-74024246 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTATGTTCGTGT+AGG | + | chr3_1:74024465-74024484 | Msa0374560:intron | 20.0% |
| !!! | GAAACATTCTTTACTTTTGT+TGG | + | chr3_1:74020004-74020023 | Msa0374560:five_prime_UTR | 25.0% |
| !!! | CATATATATCCTGTGTTTTT+TGG | + | chr3_1:74020217-74020236 | Msa0374560:intron | 25.0% |
| !!! | TCTTTTAGAAAAGAGTAAAG+TGG | - | chr3_1:74020353-74020372 | None:intergenic | 25.0% |
| ! | AACATATGTAAGAAAAAGAG+AGG | + | chr3_1:74020436-74020455 | Msa0374560:intron | 25.0% |
| ! | TTATTCTCATTGTCCTTATT+AGG | + | chr3_1:74020482-74020501 | Msa0374560:intron | 25.0% |
| ! | ATAATTCATTCAAGATGGAA+TGG | - | chr3_1:74020528-74020547 | None:intergenic | 25.0% |
| ! | TTACAATAATGTGTGTAACA+TGG | + | chr3_1:74020955-74020974 | Msa0374560:intron | 25.0% |
| ! | TACAATAATGTGTGTAACAT+GGG | + | chr3_1:74020956-74020975 | Msa0374560:intron | 25.0% |
| !! | TTTAATTTCTCAGTGAATCT+AGG | + | chr3_1:74021334-74021353 | Msa0374560:intron | 25.0% |
| !! | AATAACGTGTAGCATATTTT+TGG | + | chr3_1:74021473-74021492 | Msa0374560:intron | 25.0% |
| ! | TATGATAACTAGTGCAATTA+AGG | - | chr3_1:74021507-74021526 | None:intergenic | 25.0% |
| ! | AATCATCTAAGTAAGTTCAA+AGG | + | chr3_1:74021588-74021607 | Msa0374560:intron | 25.0% |
| ! | AAATGTACGTAACCAAAAAA+AGG | + | chr3_1:74021688-74021707 | Msa0374560:intron | 25.0% |
| !! | TTTTCATTCTCAAATTGTCT+TGG | + | chr3_1:74021832-74021851 | Msa0374560:intron | 25.0% |
| ! | ACATAAATATTGGAACCTAT+AGG | - | chr3_1:74021865-74021884 | None:intergenic | 25.0% |
| !!! | GTTCATAATTTTAACAGATG+TGG | + | chr3_1:74021929-74021948 | Msa0374560:intron | 25.0% |
| ! | ATTATATTTATGCACCAATG+AGG | - | chr3_1:74022049-74022068 | None:intergenic | 25.0% |
| ! | AAAATAGATGATAAAACACG+AGG | - | chr3_1:74022076-74022095 | None:intergenic | 25.0% |
| ! | ATTAAAGAAATTCAAGCTCA+AGG | + | chr3_1:74022388-74022407 | Msa0374560:CDS | 25.0% |
| ! | ATGTAGCAATGGAAAATATT+TGG | - | chr3_1:74022544-74022563 | None:intergenic | 25.0% |
| !!! | TTTCTTCTAAAATGTAGCAA+TGG | - | chr3_1:74022555-74022574 | None:intergenic | 25.0% |
| !! | AAGTGATAATGATCAATTCA+AGG | + | chr3_1:74022644-74022663 | Msa0374560:CDS | 25.0% |
| !! | AACAAAAGTTATTGGTAGTT+TGG | - | chr3_1:74022672-74022691 | None:intergenic | 25.0% |
| !!! | TTTCATCATGTTGACTATTT+TGG | - | chr3_1:74022788-74022807 | None:intergenic | 25.0% |
| ! | ATATTCATTCTCAATCTACA+TGG | - | chr3_1:74022941-74022960 | None:intergenic | 25.0% |
| ! | ATGTAGATTGAGAATGAATA+TGG | + | chr3_1:74022940-74022959 | Msa0374560:intron | 25.0% |
| ! | CAAGTATTATTTATCATGGA+TGG | + | chr3_1:74023100-74023119 | Msa0374560:intron | 25.0% |
| ! | TAAAACTCATGAAACTACTT+GGG | - | chr3_1:74023180-74023199 | None:intergenic | 25.0% |
| ! | AGCAAATTATCTTATCTAAC+TGG | + | chr3_1:74023429-74023448 | Msa0374560:intron | 25.0% |
| !!! | GAATTTCTGCTTATTTTTCT+TGG | + | chr3_1:74023638-74023657 | Msa0374560:intron | 25.0% |
| !!! | AGGAACTAATTTTGATAGAT+TGG | + | chr3_1:74023695-74023714 | Msa0374560:CDS | 25.0% |
| ! | AATAACAGCTTATTATGATG+AGG | + | chr3_1:74023731-74023750 | Msa0374560:CDS | 25.0% |
| ! | TAATTAAGAATGAATCTTCC+TGG | + | chr3_1:74023974-74023993 | Msa0374560:intron | 25.0% |
| !!! | CTCATCGATTTTAAAAGTAA+TGG | - | chr3_1:74024404-74024423 | None:intergenic | 25.0% |
| ! | AATTTAGTTAGTGAAACTGA+AGG | + | chr3_1:74024436-74024455 | Msa0374560:intron | 25.0% |
| ! | TGTTGGTGAAATCAAAATCA+TGG | + | chr3_1:74020021-74020040 | Msa0374560:exon | 30.0% |
| ! | GTTGGTGAAATCAAAATCAT+GGG | + | chr3_1:74020022-74020041 | Msa0374560:exon | 30.0% |
| !! | ACTTTAGAACCAAAAAACAC+AGG | - | chr3_1:74020229-74020248 | None:intergenic | 30.0% |
| AAACATGAGTGCTTATCATA+TGG | - | chr3_1:74020377-74020396 | None:intergenic | 30.0% | |
| ACAATAATGTGTGTAACATG+GGG | + | chr3_1:74020957-74020976 | Msa0374560:intron | 30.0% | |
| TTTATATGTTTCACATGGTG+AGG | + | chr3_1:74021109-74021128 | Msa0374560:intron | 30.0% | |
| GGAATATCATACTCACATAA+TGG | - | chr3_1:74021171-74021190 | None:intergenic | 30.0% | |
| GCAAAACTAATGGTTTAACA+AGG | + | chr3_1:74021408-74021427 | Msa0374560:intron | 30.0% | |
| TCTTATCTAACACGATTGTA+AGG | - | chr3_1:74021532-74021551 | None:intergenic | 30.0% | |
| !!! | TCATCTTTGAAGCCTTTTTT+TGG | - | chr3_1:74021703-74021722 | None:intergenic | 30.0% |
| TTAATTTCCAAAGCCAAAGA+AGG | + | chr3_1:74021958-74021977 | Msa0374560:CDS | 30.0% | |
| ! | TCATACAAACTTACGTGTTT+TGG | + | chr3_1:74021992-74022011 | Msa0374560:CDS | 30.0% |
| ATACTTGCAAACAAAATGCA+TGG | + | chr3_1:74022277-74022296 | Msa0374560:intron | 30.0% | |
| GTGCTGAAAATTAAATCTGT+GGG | - | chr3_1:74022477-74022496 | None:intergenic | 30.0% | |
| TGTGCTGAAAATTAAATCTG+TGG | - | chr3_1:74022478-74022497 | None:intergenic | 30.0% | |
| !!! | AACTCTCAATTTTTTGCTGT+AGG | + | chr3_1:74022577-74022596 | Msa0374560:intron | 30.0% |
| !!! | ACTCTCAATTTTTTGCTGTA+GGG | + | chr3_1:74022578-74022597 | Msa0374560:intron | 30.0% |
| TCACTTCTAAATACAATTCC+AGG | - | chr3_1:74022630-74022649 | None:intergenic | 30.0% | |
| GGAAGGAAAACAAAAGTTAT+TGG | - | chr3_1:74022680-74022699 | None:intergenic | 30.0% | |
| ACTACCAAAAATTGAATGCA+TGG | - | chr3_1:74022701-74022720 | None:intergenic | 30.0% | |
| GTGAAACTGTCATTAAGAAA+AGG | - | chr3_1:74022749-74022768 | None:intergenic | 30.0% | |
| TTGCATTGAAGTTTAAACCT+GGG | - | chr3_1:74022854-74022873 | None:intergenic | 30.0% | |
| AAAGTAAGTTTCGAGAGAAT+GGG | + | chr3_1:74022971-74022990 | Msa0374560:CDS | 30.0% | |
| GTAAAACTCATGAAACTACT+TGG | - | chr3_1:74023181-74023200 | None:intergenic | 30.0% | |
| CTTCTAAACGATTCAACATT+AGG | - | chr3_1:74023203-74023222 | None:intergenic | 30.0% | |
| ! | GATGTCATTTACTTAACGTT+TGG | + | chr3_1:74023455-74023474 | Msa0374560:intron | 30.0% |
| ! | AATAGTTTACAAGCTTTTGG+TGG | + | chr3_1:74023481-74023500 | Msa0374560:intron | 30.0% |
| TATGAACAAGGCAACATTAT+AGG | - | chr3_1:74023539-74023558 | None:intergenic | 30.0% | |
| TATCAAAATTAGTTCCTCCA+TGG | - | chr3_1:74023692-74023711 | None:intergenic | 30.0% | |
| TTTGGTTAGACAACCAAAAT+GGG | + | chr3_1:74023855-74023874 | Msa0374560:CDS | 30.0% | |
| AATATTTCGTATGAATTGCC+TGG | + | chr3_1:74024234-74024253 | Msa0374560:CDS | 30.0% | |
| ATATTTCGTATGAATTGCCT+GGG | + | chr3_1:74024235-74024254 | Msa0374560:CDS | 30.0% | |
| GCTGAATTGAACTTTAATTG+TGG | - | chr3_1:74024523-74024542 | None:intergenic | 30.0% | |
| AGTTCAATTCAGCTGAAAAT+TGG | + | chr3_1:74024530-74024549 | Msa0374560:CDS | 30.0% | |
| !! | TTGAAGTATCGGCAAAATTA+GGG | - | chr3_1:74024576-74024595 | None:intergenic | 30.0% |
| !! | TTTGAAGTATCGGCAAAATT+AGG | - | chr3_1:74024577-74024596 | None:intergenic | 30.0% |
| AAGATACATCTGACTATATG+TGG | + | chr3_1:74024635-74024654 | Msa0374560:CDS | 30.0% | |
| TGTCAACAATCATCTTAGTA+AGG | - | chr3_1:74024747-74024766 | None:intergenic | 30.0% | |
| TTGACATGTTGAATTGTTGA+TGG | + | chr3_1:74024761-74024780 | Msa0374560:intron | 30.0% | |
| GTTCTTAGTATATACAGTCA+AGG | + | chr3_1:74024820-74024839 | Msa0374560:CDS | 30.0% | |
| AAATCAAAATCATGGGAGAG+TGG | + | chr3_1:74020029-74020048 | Msa0374560:exon | 35.0% | |
| AGAACATCGTTGGTCATTAA+CGG | + | chr3_1:74020127-74020146 | Msa0374560:CDS | 35.0% | |
| ! | CAGAGAAGAGGATTTTATGA+TGG | - | chr3_1:74020153-74020172 | None:intergenic | 35.0% |
| CATCATAAAATCCTCTTCTC+TGG | + | chr3_1:74020151-74020170 | Msa0374560:CDS | 35.0% | |
| ! | GCTGAAACTTAAAGCACTTA+AGG | + | chr3_1:74020903-74020922 | Msa0374560:intron | 35.0% |
| !!! | AACCATTAGTTTTGCCAAGA+CGG | - | chr3_1:74021403-74021422 | None:intergenic | 35.0% |
| AAGAATGTTTGACGATAGAG+TGG | + | chr3_1:74021548-74021567 | Msa0374560:intron | 35.0% | |
| AGAATGTTTGACGATAGAGT+GGG | + | chr3_1:74021549-74021568 | Msa0374560:intron | 35.0% | |
| !! | TTGGCTTTGGAAATTAAGTC+AGG | - | chr3_1:74021955-74021974 | None:intergenic | 35.0% |
| CCACTGAATTTCAACTACTA+AGG | - | chr3_1:74022143-74022162 | None:intergenic | 35.0% | |
| CCTTAGTAGTTGAAATTCAG+TGG | + | chr3_1:74022140-74022159 | Msa0374560:intron | 35.0% | |
| ATGTGTGTCCCACAAAAATT+TGG | + | chr3_1:74022176-74022195 | Msa0374560:intron | 35.0% | |
| ! | TAGTGGAAGGTTTGATTTAG+TGG | + | chr3_1:74022360-74022379 | Msa0374560:CDS | 35.0% |
| ! | AGTGGAAGGTTTGATTTAGT+GGG | + | chr3_1:74022361-74022380 | Msa0374560:CDS | 35.0% |
| TTATATGTGACCCTTCGAAT+TGG | + | chr3_1:74022412-74022431 | Msa0374560:CDS | 35.0% | |
| AATGTATGGTCCAATTCGAA+GGG | - | chr3_1:74022425-74022444 | None:intergenic | 35.0% | |
| ATTGAGAGTGAATGCACTTA+TGG | + | chr3_1:74022442-74022461 | Msa0374560:CDS | 35.0% | |
| TTGAGAGTGAATGCACTTAT+GGG | + | chr3_1:74022443-74022462 | Msa0374560:CDS | 35.0% | |
| !!! | CTCTCAATTTTTTGCTGTAG+GGG | + | chr3_1:74022579-74022598 | Msa0374560:intron | 35.0% |
| GGAACATCATGTAACCATAA+TGG | - | chr3_1:74022609-74022628 | None:intergenic | 35.0% | |
| TTATGGTTACATGATGTTCC+TGG | + | chr3_1:74022609-74022628 | Msa0374560:CDS | 35.0% | |
| CCAAAAATTGAATGCATGGA+AGG | - | chr3_1:74022697-74022716 | None:intergenic | 35.0% | |
| ! | CCTTCCATGCATTCAATTTT+TGG | + | chr3_1:74022694-74022713 | Msa0374560:intron | 35.0% |
| TCCTTGTGAAGCAAAAAGAT+TGG | - | chr3_1:74022815-74022834 | None:intergenic | 35.0% | |
| ! | AATCTTTTTGCTTCACAAGG+AGG | + | chr3_1:74022814-74022833 | Msa0374560:CDS | 35.0% |
| TAAACCTGGGATAGTATGAT+AGG | - | chr3_1:74022841-74022860 | None:intergenic | 35.0% | |
| GTTGCATTGAAGTTTAAACC+TGG | - | chr3_1:74022855-74022874 | None:intergenic | 35.0% | |
| CAAAGTAAGTTTCGAGAGAA+TGG | + | chr3_1:74022970-74022989 | Msa0374560:CDS | 35.0% | |
| ! | TCTTGTTTACACATCATCCA+AGG | - | chr3_1:74023051-74023070 | None:intergenic | 35.0% |
| ! | CTCCGTCTATTTTATATCGT+CGG | + | chr3_1:74023133-74023152 | Msa0374560:intron | 35.0% |
| GACCGACGATATAAAATAGA+CGG | - | chr3_1:74023138-74023157 | None:intergenic | 35.0% | |
| CAATGTGGGAGAAACTTTAA+GGG | + | chr3_1:74023284-74023303 | Msa0374560:CDS | 35.0% | |
| AATGTGGGAGAAACTTTAAG+GGG | + | chr3_1:74023285-74023304 | Msa0374560:CDS | 35.0% | |
| ! | TCCTTTCTTTGCTATGAACA+AGG | - | chr3_1:74023551-74023570 | None:intergenic | 35.0% |
| ! | ATTCGCTAAGTTGAAAGAGA+AGG | - | chr3_1:74023622-74023641 | None:intergenic | 35.0% |
| AGCTGTTATTATGAAAGCAG+AGG | - | chr3_1:74023721-74023740 | None:intergenic | 35.0% | |
| GTTTGGTTAGACAACCAAAA+TGG | + | chr3_1:74023854-74023873 | Msa0374560:CDS | 35.0% | |
| TTGGTTAGACAACCAAAATG+GGG | + | chr3_1:74023856-74023875 | Msa0374560:CDS | 35.0% | |
| AAATTGCGGAAAATATGTCC+AGG | - | chr3_1:74023995-74024014 | None:intergenic | 35.0% | |
| ! | AACTTCTGAAAACATAAGCC+TGG | - | chr3_1:74024152-74024171 | None:intergenic | 35.0% |
| AATTGGATTGTTACATCCCT+AGG | - | chr3_1:74024210-74024229 | None:intergenic | 35.0% | |
| AAATCAATGAGTATCCTACC+AGG | + | chr3_1:74024258-74024277 | Msa0374560:CDS | 35.0% | |
| AAGAATGTAGTCTTCAACAC+CGG | + | chr3_1:74024285-74024304 | Msa0374560:CDS | 35.0% | |
| ! | AACATTCGATTTTACCTTGC+CGG | - | chr3_1:74024307-74024326 | None:intergenic | 35.0% |
| ATGGTCAAATCAAGTAAAGC+AGG | - | chr3_1:74024385-74024404 | None:intergenic | 35.0% | |
| TAATTGTGGTTTCATTGCTC+TGG | - | chr3_1:74024509-74024528 | None:intergenic | 35.0% | |
| !!! | GTCTGCTCTTTTTGAAGTAT+CGG | - | chr3_1:74024587-74024606 | None:intergenic | 35.0% |
| ACTATATGTGGTACACTTTC+AGG | + | chr3_1:74024647-74024666 | Msa0374560:CDS | 35.0% | |
| CTAAGAACAGATTGTGCATT+AGG | - | chr3_1:74024808-74024827 | None:intergenic | 35.0% | |
| ! | GTTTTGCATTCTTTCGTCAA+TGG | + | chr3_1:74024847-74024866 | Msa0374560:CDS | 35.0% |
| !! | TTCGTCAATGGAGTTTTAAC+AGG | + | chr3_1:74024859-74024878 | Msa0374560:CDS | 35.0% |
| AGTGAATTGAACCAGAGAAG+AGG | - | chr3_1:74020165-74020184 | None:intergenic | 40.0% | |
| ATATGACTTGAACGTACCTG+AGG | - | chr3_1:74020202-74020221 | None:intergenic | 40.0% | |
| TGTCTTGGTCTATAGCCTAT+AGG | + | chr3_1:74021847-74021866 | Msa0374560:intron | 40.0% | |
| ATTTCCAAAGCCAAAGAAGG+AGG | + | chr3_1:74021961-74021980 | Msa0374560:CDS | 40.0% | |
| ! | TAATCCTCCTTCTTTGGCTT+TGG | - | chr3_1:74021968-74021987 | None:intergenic | 40.0% |
| GACATCTAATCCTCCTTCTT+TGG | - | chr3_1:74021974-74021993 | None:intergenic | 40.0% | |
| TGGGACACACATGATTTAGT+GGG | - | chr3_1:74022168-74022187 | None:intergenic | 40.0% | |
| ! | GTGTCTCGCCAAATTTTTGT+GGG | - | chr3_1:74022187-74022206 | None:intergenic | 40.0% |
| ! | TGTGTCTCGCCAAATTTTTG+TGG | - | chr3_1:74022188-74022207 | None:intergenic | 40.0% |
| CTTCTGCAGTATGAGTTTAG+TGG | + | chr3_1:74022343-74022362 | Msa0374560:intron | 40.0% | |
| TGCAGTATGAGTTTAGTGGA+AGG | + | chr3_1:74022347-74022366 | Msa0374560:intron | 40.0% | |
| CAATGTATGGTCCAATTCGA+AGG | - | chr3_1:74022426-74022445 | None:intergenic | 40.0% | |
| GTGCATTCACTCTCAATGTA+TGG | - | chr3_1:74022439-74022458 | None:intergenic | 40.0% | |
| ! | GCCAATCTTTTTGCTTCACA+AGG | + | chr3_1:74022811-74022830 | Msa0374560:CDS | 40.0% |
| ATACTTGAAAGACTGACCAC+TGG | - | chr3_1:74023087-74023106 | None:intergenic | 40.0% | |
| GCAATGTGGGAGAAACTTTA+AGG | + | chr3_1:74023283-74023302 | Msa0374560:CDS | 40.0% | |
| CAATTCTCTGTCCATAGTGA+AGG | - | chr3_1:74023329-74023348 | None:intergenic | 40.0% | |
| CTTCACTATGGACAGAGAAT+TGG | + | chr3_1:74023327-74023346 | Msa0374560:CDS | 40.0% | |
| ! | TCTGAAGCTGATCTCAAGTA+TGG | - | chr3_1:74023511-74023530 | None:intergenic | 40.0% |
| ! | GCCTTGTTCATAGCAAAGAA+AGG | + | chr3_1:74023547-74023566 | Msa0374560:CDS | 40.0% |
| ACGAATTTGATGCAGTACCA+TGG | + | chr3_1:74023672-74023691 | Msa0374560:intron | 40.0% | |
| AATTTGATGCAGTACCATGG+AGG | + | chr3_1:74023675-74023694 | Msa0374560:intron | 40.0% | |
| TTATTATGATGAGGCTCCAC+TGG | + | chr3_1:74023740-74023759 | Msa0374560:CDS | 40.0% | |
| TCCACTGGATGAATATGGTA+TGG | + | chr3_1:74023755-74023774 | Msa0374560:intron | 40.0% | |
| ACCATACCATATTCATCCAG+TGG | - | chr3_1:74023759-74023778 | None:intergenic | 40.0% | |
| TTTGGTTGTCTAACCAAACC+TGG | - | chr3_1:74023853-74023872 | None:intergenic | 40.0% | |
| ACCAAAATGGGGACATCTTA+AGG | + | chr3_1:74023867-74023886 | Msa0374560:CDS | 40.0% | |
| ! | TCCTTAAGATGTCCCCATTT+TGG | - | chr3_1:74023871-74023890 | None:intergenic | 40.0% |
| TGTTCACAACCTCTACTTGA+TGG | + | chr3_1:74023913-74023932 | Msa0374560:CDS | 40.0% | |
| ! | GTTTGAGTTCCATCAAGTAG+AGG | - | chr3_1:74023925-74023944 | None:intergenic | 40.0% |
| ! | TTTTCTCACCTTTTTCCACC+AGG | + | chr3_1:74024131-74024150 | Msa0374560:intron | 40.0% |
| AACATAAGCCTGGTGGAAAA+AGG | - | chr3_1:74024142-74024161 | None:intergenic | 40.0% | |
| ! | TTCTGAAAACATAAGCCTGG+TGG | - | chr3_1:74024149-74024168 | None:intergenic | 40.0% |
| ! | AGGTCCACTATTTTCCAAGA+AGG | - | chr3_1:74024190-74024209 | None:intergenic | 40.0% |
| !! | TCTTGGAAAATAGTGGACCT+AGG | + | chr3_1:74024190-74024209 | Msa0374560:CDS | 40.0% |
| !! | CTTGGAAAATAGTGGACCTA+GGG | + | chr3_1:74024191-74024210 | Msa0374560:CDS | 40.0% |
| !! | AGGATACTCATTGATTTCCC+AGG | - | chr3_1:74024255-74024274 | None:intergenic | 40.0% |
| !! | AGTATCGGCAAAATTAGGGA+TGG | - | chr3_1:74024572-74024591 | None:intergenic | 40.0% |
| CAAACATTCTTTAGTGCAGC+TGG | - | chr3_1:74024697-74024716 | None:intergenic | 40.0% | |
| !! | TGTTGAATTGTTGATGGTGC+AGG | + | chr3_1:74024767-74024786 | Msa0374560:intron | 40.0% |
| TCAAAATCATGGGAGAGTGG+TGG | + | chr3_1:74020032-74020051 | Msa0374560:exon | 45.0% | |
| TACCTACGACAGAACATCGT+TGG | + | chr3_1:74020117-74020136 | Msa0374560:CDS | 45.0% | |
| AAAAAGAGAGGCAGAGACGA+GGG | + | chr3_1:74020448-74020467 | Msa0374560:intron | 45.0% | |
| !! | TAGTTTTGCCAAGACGGCAA+AGG | - | chr3_1:74021397-74021416 | None:intergenic | 45.0% |
| TGCCGTCTTGGCAAAACTAA+TGG | + | chr3_1:74021398-74021417 | Msa0374560:intron | 45.0% | |
| ATGTTTGACGATAGAGTGGG+TGG | + | chr3_1:74021552-74021571 | Msa0374560:intron | 45.0% | |
| AATCTTCACGAGCCTCAACA+AGG | + | chr3_1:74022015-74022034 | Msa0374560:CDS | 45.0% | |
| TATGCACCAATGAGGTTACC+TGG | - | chr3_1:74022041-74022060 | None:intergenic | 45.0% | |
| GTGGGACACACATGATTTAG+TGG | - | chr3_1:74022169-74022188 | None:intergenic | 45.0% | |
| AGGACCTATCATACTATCCC+AGG | + | chr3_1:74022834-74022853 | Msa0374560:CDS | 45.0% | |
| ! | ATGGGTTGCCCTATATTCGT+TGG | + | chr3_1:74022989-74023008 | Msa0374560:CDS | 45.0% |
| TGGGTTGCCCTATATTCGTT+GGG | + | chr3_1:74022990-74023009 | Msa0374560:CDS | 45.0% | |
| ATGCAGATCAACGCATGCAA+TGG | + | chr3_1:74023257-74023276 | Msa0374560:intron | 45.0% | |
| CATGCAATGGCATGCAATGT+GGG | + | chr3_1:74023270-74023289 | Msa0374560:CDS | 45.0% | |
| !! | GAAGGCTTGTTAGGAGAGTT+TGG | - | chr3_1:74023311-74023330 | None:intergenic | 45.0% |
| CTCCTAACAAGCCTTCACTA+TGG | + | chr3_1:74023315-74023334 | Msa0374560:CDS | 45.0% | |
| ! | GTCCATAGTGAAGGCTTGTT+AGG | - | chr3_1:74023320-74023339 | None:intergenic | 45.0% |
| ! | CGCTAAGTTGAAAGAGAAGG+AGG | - | chr3_1:74023619-74023638 | None:intergenic | 45.0% |
| CACAGTCAGTCACGTAACAA+TGG | - | chr3_1:74023821-74023840 | None:intergenic | 45.0% | |
| TTACGTGACTGACTGTGCTA+AGG | + | chr3_1:74023824-74023843 | Msa0374560:intron | 45.0% | |
| TGTGCTAAGGTAACCAGGTT+TGG | + | chr3_1:74023837-74023856 | Msa0374560:intron | 45.0% | |
| ACTCAAACCACCTTCAGCTT+AGG | + | chr3_1:74023937-74023956 | Msa0374560:CDS | 45.0% | |
| GCTGCCTTCTTGGAAAATAG+TGG | + | chr3_1:74024183-74024202 | Msa0374560:CDS | 45.0% | |
| AAGACTACATTCTTGCAGCC+TGG | - | chr3_1:74024279-74024298 | None:intergenic | 45.0% | |
| !!! | TATTTAATTATTTTTTTTAC+TGG | + | chr3_1:74021371-74021390 | Msa0374560:intron | 5.0% |
| GGTAACATTGCCACCATGGA+CGG | - | chr3_1:74020101-74020120 | None:intergenic | 50.0% | |
| CGTAGGTAACATTGCCACCA+TGG | - | chr3_1:74020105-74020124 | None:intergenic | 50.0% | |
| GACCAACGATGTTCTGTCGT+AGG | - | chr3_1:74020122-74020141 | None:intergenic | 50.0% | |
| GAAAAAGAGAGGCAGAGACG+AGG | + | chr3_1:74020447-74020466 | Msa0374560:intron | 50.0% | |
| ! | TCATTGATGGCAACTGCCAG+TGG | + | chr3_1:74021056-74021075 | Msa0374560:intron | 50.0% |
| GTACACACAAGTGATGCCAC+TGG | - | chr3_1:74021075-74021094 | None:intergenic | 50.0% | |
| !! | TTTACTGGCCTTTGCCGTCT+TGG | + | chr3_1:74021386-74021405 | Msa0374560:intron | 50.0% |
| ACAAGGCCAGGTAACCTCAT+TGG | + | chr3_1:74022032-74022051 | Msa0374560:intron | 50.0% | |
| GCTGTAGGGGTCTACCATTA+TGG | + | chr3_1:74022592-74022611 | Msa0374560:intron | 50.0% | |
| TGGGCAGCCCAACGAATATA+GGG | - | chr3_1:74023000-74023019 | None:intergenic | 50.0% | |
| TTGGGCAGCCCAACGAATAT+AGG | - | chr3_1:74023001-74023020 | None:intergenic | 50.0% | |
| TATTCGTTGGGCTGCCCAAA+TGG | + | chr3_1:74023002-74023021 | Msa0374560:CDS | 50.0% | |
| TTGAAGTCCCACGGCCATTT+GGG | - | chr3_1:74023019-74023038 | None:intergenic | 50.0% | |
| ! | TTTGAAGTCCCACGGCCATT+TGG | - | chr3_1:74023020-74023039 | None:intergenic | 50.0% |
| ACACATCATCCAAGGCACAC+CGG | - | chr3_1:74023043-74023062 | None:intergenic | 50.0% | |
| AGATGATGCTCCTGATCCAG+TGG | + | chr3_1:74023068-74023087 | Msa0374560:CDS | 50.0% | |
| GAAAGACTGACCACTGGATC+AGG | - | chr3_1:74023081-74023100 | None:intergenic | 50.0% | |
| GCATGCAATGGCATGCAATG+TGG | + | chr3_1:74023269-74023288 | Msa0374560:CDS | 50.0% | |
| GAGGCTCCACTGGATGAATA+TGG | + | chr3_1:74023750-74023769 | Msa0374560:CDS | 50.0% | |
| CTGACTGTGCTAAGGTAACC+AGG | + | chr3_1:74023832-74023851 | Msa0374560:intron | 50.0% | |
| TTGCTGTGAGCCTAAGCTGA+AGG | - | chr3_1:74023950-74023969 | None:intergenic | 50.0% | |
| CAAGAAGGCAGCACATTCTG+TGG | - | chr3_1:74024175-74024194 | None:intergenic | 50.0% | |
| CACAGAATGTGCTGCCTTCT+TGG | + | chr3_1:74024173-74024192 | Msa0374560:CDS | 50.0% | |
| CTACATTCTTGCAGCCTGGT+AGG | - | chr3_1:74024275-74024294 | None:intergenic | 50.0% | |
| TGTAGTCTTCAACACCGGCA+AGG | + | chr3_1:74024290-74024309 | Msa0374560:CDS | 50.0% | |
| GTGTCTCTTTGCACCGTCCA+TGG | + | chr3_1:74020085-74020104 | Msa0374560:CDS | 55.0% | |
| TCTCTTTGCACCGTCCATGG+TGG | + | chr3_1:74020088-74020107 | Msa0374560:CDS | 55.0% | |
| CTATCCTCGTAGCACTCCTC+AGG | + | chr3_1:74020183-74020202 | Msa0374560:CDS | 55.0% | |
| !! | GAGGTTACCTGGCCTTGTTG+AGG | - | chr3_1:74022030-74022049 | None:intergenic | 55.0% |
| ATGGCCGTGGGACTTCAAAC+CGG | + | chr3_1:74023021-74023040 | Msa0374560:CDS | 55.0% | |
| !! | CACACCGGTTTGAAGTCCCA+CGG | - | chr3_1:74023028-74023047 | None:intergenic | 55.0% |
| GACTTCAAACCGGTGTGCCT+TGG | + | chr3_1:74023031-74023050 | Msa0374560:CDS | 55.0% | |
| CTGTGAGCCTAAGCTGAAGG+TGG | - | chr3_1:74023947-74023966 | None:intergenic | 55.0% | |
| !! | CGTACCTGAGGAGTGCTACG+AGG | - | chr3_1:74020190-74020209 | None:intergenic | 60.0% |
| AAGAGAGGCAGAGACGAGGG+AGG | + | chr3_1:74020451-74020470 | Msa0374560:intron | 60.0% | |
| AGAGAGGCAGAGACGAGGGA+GGG | + | chr3_1:74020452-74020471 | Msa0374560:intron | 60.0% | |
| TCACGAGCCTCAACAAGGCC+AGG | + | chr3_1:74022020-74022039 | Msa0374560:CDS | 60.0% | |
| TTGGGCTGCCCAAATGGCCG+TGG | + | chr3_1:74023008-74023027 | Msa0374560:CDS | 65.0% | |
| TGGGCTGCCCAAATGGCCGT+GGG | + | chr3_1:74023009-74023028 | Msa0374560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 74019969 | 74024891 | 74019969 | ID=Msa0374560;Name=Msa0374560 |
| chr3_1 | mRNA | 74019969 | 74024891 | 74019969 | ID=Msa0374560-mRNA-1;Parent=Msa0374560;Name=Msa0374560-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|0.16|0.15|1|1|1|13|0|508 |
| chr3_1 | exon | 74019969 | 74020204 | 74019969 | ID=Msa0374560-mRNA-1:exon:17013;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74021946 | 74022041 | 74021946 | ID=Msa0374560-mRNA-1:exon:17014;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74022352 | 74022464 | 74022352 | ID=Msa0374560-mRNA-1:exon:17015;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74022599 | 74022665 | 74022599 | ID=Msa0374560-mRNA-1:exon:17016;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74022763 | 74022855 | 74022763 | ID=Msa0374560-mRNA-1:exon:17017;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74022946 | 74023089 | 74022946 | ID=Msa0374560-mRNA-1:exon:17018;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74023263 | 74023357 | 74023263 | ID=Msa0374560-mRNA-1:exon:17019;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74023486 | 74023591 | 74023486 | ID=Msa0374560-mRNA-1:exon:17020;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74023687 | 74023771 | 74023687 | ID=Msa0374560-mRNA-1:exon:17021;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74023854 | 74023972 | 74023854 | ID=Msa0374560-mRNA-1:exon:17022;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74024153 | 74024311 | 74024153 | ID=Msa0374560-mRNA-1:exon:17023;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74024487 | 74024668 | 74024487 | ID=Msa0374560-mRNA-1:exon:17024;Parent=Msa0374560-mRNA-1 |
| chr3_1 | exon | 74024789 | 74024891 | 74024789 | ID=Msa0374560-mRNA-1:exon:17025;Parent=Msa0374560-mRNA-1 |
| chr3_1 | five_prime_UTR | 74019969 | 74020039 | 74019969 | ID=Msa0374560-mRNA-1:five_prime_utr;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74020040 | 74020204 | 74020040 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74021946 | 74022041 | 74021946 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74022352 | 74022464 | 74022352 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74022599 | 74022665 | 74022599 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74022763 | 74022855 | 74022763 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74022946 | 74023089 | 74022946 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74023263 | 74023357 | 74023263 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74023486 | 74023591 | 74023486 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74023687 | 74023771 | 74023687 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74023854 | 74023972 | 74023854 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74024153 | 74024311 | 74024153 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74024487 | 74024668 | 74024487 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| chr3_1 | CDS | 74024789 | 74024891 | 74024789 | ID=Msa0374560-mRNA-1:cds;Parent=Msa0374560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
