Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518610 | XP_003602691.1 | 90.723 | 636 | 50 | 1 | 1 | 636 | 1 | 627 | 0.0 | 1119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518610 | sp|Q9MA92|FPP3_ARATH | 40.816 | 637 | 288 | 13 | 1 | 621 | 1 | 564 | 1.09e-110 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518610 | G7J2M7 | 90.723 | 636 | 50 | 1 | 1 | 636 | 1 | 627 | 0.0 | 1119 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0518610 | -0.805676 | 1.189955e-49 | -8.615850e-47 |
| Msa0006390 | Msa0518610 | 0.811837 | 5.732556e-51 | -8.615850e-47 |
| Msa0007230 | Msa0518610 | 0.818546 | 1.852336e-52 | -8.615850e-47 |
| Msa0011720 | Msa0518610 | 0.809938 | 1.477414e-50 | -8.615850e-47 |
| Msa0055590 | Msa0518610 | 0.827413 | 1.586183e-54 | -8.615850e-47 |
| Msa0058340 | Msa0518610 | 0.810442 | 1.150370e-50 | -8.615850e-47 |
| Msa0060350 | Msa0518610 | 0.803290 | 3.740110e-49 | -8.615850e-47 |
| Msa0094100 | Msa0518610 | 0.829160 | 6.012850e-55 | -8.615850e-47 |
| Msa0105420 | Msa0518610 | 0.833784 | 4.371929e-56 | -8.615850e-47 |
| Msa0120330 | Msa0518610 | 0.806891 | 6.599595e-50 | -8.615850e-47 |
| Msa0140910 | Msa0518610 | 0.801259 | 9.798788e-49 | -8.615850e-47 |
| Msa0151690 | Msa0518610 | 0.803093 | 4.109902e-49 | -8.615850e-47 |
| Msa0162030 | Msa0518610 | 0.810567 | 1.081083e-50 | -8.615850e-47 |
| Msa0162050 | Msa0518610 | 0.834340 | 3.171958e-56 | -8.615850e-47 |
| Msa0162070 | Msa0518610 | 0.817262 | 3.613156e-52 | -8.615850e-47 |
| Msa0193650 | Msa0518610 | 0.856970 | 2.243549e-62 | -8.615850e-47 |
| Msa0195770 | Msa0518610 | 0.829594 | 4.716131e-55 | -8.615850e-47 |
| Msa0197230 | Msa0518610 | 0.809473 | 1.859540e-50 | -8.615850e-47 |
| Msa0200260 | Msa0518610 | 0.804345 | 2.258292e-49 | -8.615850e-47 |
| Msa0208630 | Msa0518610 | 0.833287 | 5.816054e-56 | -8.615850e-47 |
| Msa0217400 | Msa0518610 | 0.846359 | 2.282490e-59 | -8.615850e-47 |
| Msa0221060 | Msa0518610 | 0.819812 | 9.542303e-53 | -8.615850e-47 |
| Msa0230770 | Msa0518610 | 0.829594 | 4.716131e-55 | -8.615850e-47 |
| Msa0371540 | Msa0518610 | 0.807879 | 4.074851e-50 | -8.615850e-47 |
| Msa0378460 | Msa0518610 | 0.802605 | 5.182076e-49 | -8.615850e-47 |
| Msa0424480 | Msa0518610 | 0.803798 | 2.935173e-49 | -8.615850e-47 |
| Msa0427880 | Msa0518610 | 0.918836 | 9.522765e-87 | -8.615850e-47 |
| Msa0437710 | Msa0518610 | 0.806238 | 9.065044e-50 | -8.615850e-47 |
| Msa0440110 | Msa0518610 | 0.813713 | 2.227202e-51 | -8.615850e-47 |
| Msa0442880 | Msa0518610 | 0.800912 | 1.153551e-48 | -8.615850e-47 |
| Msa0448550 | Msa0518610 | -0.825211 | 5.303194e-54 | -8.615850e-47 |
| Msa0458440 | Msa0518610 | 0.805304 | 1.424017e-49 | -8.615850e-47 |
| Msa0466060 | Msa0518610 | 0.812256 | 4.646330e-51 | -8.615850e-47 |
| Msa0471530 | Msa0518610 | 0.806262 | 8.958523e-50 | -8.615850e-47 |
| Msa0474110 | Msa0518610 | 0.938984 | 2.720010e-99 | -8.615850e-47 |
| Msa0257250 | Msa0518610 | 0.847152 | 1.385505e-59 | -8.615850e-47 |
| Msa0262520 | Msa0518610 | 0.820032 | 8.498204e-53 | -8.615850e-47 |
| Msa0264350 | Msa0518610 | 0.801017 | 1.097875e-48 | -8.615850e-47 |
| Msa0265820 | Msa0518610 | 0.826680 | 2.375149e-54 | -8.615850e-47 |
| Msa0266000 | Msa0518610 | -0.824645 | 7.215949e-54 | -8.615850e-47 |
| Msa0269360 | Msa0518610 | 0.835048 | 2.105548e-56 | -8.615850e-47 |
| Msa0270270 | Msa0518610 | 0.822515 | 2.273252e-53 | -8.615850e-47 |
| Msa0294950 | Msa0518610 | 0.801486 | 8.803928e-49 | -8.615850e-47 |
| Msa0296560 | Msa0518610 | 0.842476 | 2.526415e-58 | -8.615850e-47 |
| Msa0304740 | Msa0518610 | 0.803035 | 4.224244e-49 | -8.615850e-47 |
| Msa0313990 | Msa0518610 | 0.860116 | 2.584417e-63 | -8.615850e-47 |
| Msa0325470 | Msa0518610 | 0.813749 | 2.186255e-51 | -8.615850e-47 |
| Msa0331590 | Msa0518610 | 0.803432 | 3.495358e-49 | -8.615850e-47 |
| Msa0331920 | Msa0518610 | 0.820427 | 6.899653e-53 | -8.615850e-47 |
| Msa0335040 | Msa0518610 | 0.844358 | 7.942874e-59 | -8.615850e-47 |
| Msa0338110 | Msa0518610 | 0.812148 | 4.904362e-51 | -8.615850e-47 |
| Msa0342200 | Msa0518610 | 0.814710 | 1.341176e-51 | -8.615850e-47 |
| Msa0349080 | Msa0518610 | 0.813323 | 2.713128e-51 | -8.615850e-47 |
| Msa0491040 | Msa0518610 | 0.809241 | 2.085719e-50 | -8.615850e-47 |
| Msa0509970 | Msa0518610 | 0.804203 | 2.418126e-49 | -8.615850e-47 |
| Msa0517340 | Msa0518610 | 0.813628 | 2.325068e-51 | -8.615850e-47 |
| Msa0518610 | Msa0524890 | -0.822713 | 2.044841e-53 | -8.615850e-47 |
| Msa0518610 | Msa0526710 | 0.804725 | 1.881970e-49 | -8.615850e-47 |
| Msa0518610 | Msa0528970 | 0.818180 | 2.242772e-52 | -8.615850e-47 |
| Msa0518610 | Msa0548280 | -0.813616 | 2.339456e-51 | -8.615850e-47 |
| Msa0518610 | Msa0578970 | 0.817754 | 2.798464e-52 | -8.615850e-47 |
| Msa0518610 | Msa0581760 | 0.801614 | 8.284556e-49 | -8.615850e-47 |
| Msa0518610 | Msa0583930 | 0.807804 | 4.225572e-50 | -8.615850e-47 |
| Msa0518610 | Msa0583940 | 0.828807 | 7.321843e-55 | -8.615850e-47 |
| Msa0518610 | Msa0585700 | 0.802130 | 6.492587e-49 | -8.615850e-47 |
| Msa0518610 | Msa0603680 | 0.800037 | 1.738693e-48 | -8.615850e-47 |
| Msa0518610 | Msa0606160 | 0.800514 | 1.390567e-48 | -8.615850e-47 |
| Msa0518610 | Msa0610590 | 0.814885 | 1.226557e-51 | -8.615850e-47 |
| Msa0518610 | Msa0621590 | 0.806288 | 8.847006e-50 | -8.615850e-47 |
| Msa0518610 | Msa0621890 | 0.822981 | 1.770761e-53 | -8.615850e-47 |
| Msa0518610 | Msa0647130 | 0.804499 | 2.097715e-49 | -8.615850e-47 |
| Msa0518610 | Msa0649970 | 0.816707 | 4.812982e-52 | -8.615850e-47 |
| Msa0518610 | Msa0651190 | 0.822578 | 2.197900e-53 | -8.615850e-47 |
| Msa0518610 | Msa0677400 | 0.807454 | 5.015524e-50 | -8.615850e-47 |
| Msa0518610 | Msa0697140 | 0.832146 | 1.116589e-55 | -8.615850e-47 |
| Msa0518610 | Msa0702350 | 0.805585 | 1.243264e-49 | -8.615850e-47 |
| Msa0518610 | Msa0702680 | 0.822962 | 1.788877e-53 | -8.615850e-47 |
| Msa0518610 | Msa0703490 | 0.801047 | 1.082367e-48 | -8.615850e-47 |
| Msa0518610 | Msa0719490 | -0.800473 | 1.417700e-48 | -8.615850e-47 |
| Msa0518610 | Msa0722930 | 0.806668 | 7.354772e-50 | -8.615850e-47 |
| Msa0518610 | Msa0748930 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
| Msa0518610 | Msa0749460 | 0.804215 | 2.404108e-49 | -8.615850e-47 |
| Msa0518610 | Msa0757950 | 0.844023 | 9.770885e-59 | -8.615850e-47 |
| Msa0518610 | Msa0769390 | 0.800833 | 1.197201e-48 | -8.615850e-47 |
| Msa0518610 | Msa0789690 | 0.806031 | 1.002039e-49 | -8.615850e-47 |
| Msa0518610 | Msa0791070 | 0.810862 | 9.331658e-51 | -8.615850e-47 |
| Msa0518610 | Msa0792510 | 0.807013 | 6.218524e-50 | -8.615850e-47 |
| Msa0518610 | Msa0802470 | -0.803248 | 3.817246e-49 | -8.615850e-47 |
| Msa0518610 | Msa0810480 | 0.844304 | 8.215273e-59 | -8.615850e-47 |
| Msa0518610 | Msa0832370 | 0.817464 | 3.252970e-52 | -8.615850e-47 |
| Msa0518610 | Msa0844240 | 0.808268 | 3.366831e-50 | -8.615850e-47 |
| Msa0518610 | Msa0890250 | 0.805804 | 1.118271e-49 | -8.615850e-47 |
| Msa0518610 | Msa0893810 | 0.804635 | 1.964973e-49 | -8.615850e-47 |
| Msa0518610 | Msa0896210 | 0.823728 | 1.184853e-53 | -8.615850e-47 |
| Msa0518610 | Msa0896220 | 0.810157 | 1.325083e-50 | -8.615850e-47 |
| Msa0518610 | Msa0900200 | 0.800462 | 1.425258e-48 | -8.615850e-47 |
| Msa0518610 | Msa0901100 | 0.802561 | 5.291337e-49 | -8.615850e-47 |
| Msa0518610 | Msa0907700 | 0.802107 | 6.562364e-49 | -8.615850e-47 |
| Msa0518610 | Msa0908170 | 0.803370 | 3.600085e-49 | -8.615850e-47 |
| Msa0518610 | Msa0937940 | 0.811161 | 8.038337e-51 | -8.615850e-47 |
| Msa0518610 | Msa0951720 | 0.810622 | 1.051779e-50 | -8.615850e-47 |
| Msa0518610 | Msa0969570 | 0.800926 | 1.145730e-48 | -8.615850e-47 |
| Msa0518610 | Msa0980440 | 0.813697 | 2.245252e-51 | -8.615850e-47 |
| Msa0518610 | Msa0996080 | 0.803115 | 4.065518e-49 | -8.615850e-47 |
| Msa0518610 | Msa1000020 | 0.801508 | 8.710040e-49 | -8.615850e-47 |
| Msa0518610 | Msa1008490 | 0.860089 | 2.634328e-63 | -8.615850e-47 |
| Msa0518610 | Msa1009000 | 0.851233 | 1.014269e-60 | -8.615850e-47 |
| Msa0518610 | Msa1019020 | 0.816764 | 4.673993e-52 | -8.615850e-47 |
| Msa0518610 | Msa1020710 | 0.831044 | 2.086688e-55 | -8.615850e-47 |
| Msa0518610 | Msa1033440 | -0.816138 | 6.452872e-52 | -8.615850e-47 |
| Msa0518610 | Msa1036390 | 0.821833 | 3.272783e-53 | -8.615850e-47 |
| Msa0518610 | Msa1038050 | 0.815195 | 1.046916e-51 | -8.615850e-47 |
| Msa0518610 | Msa1038480 | 0.800238 | 1.583216e-48 | -8.615850e-47 |
| Msa0518610 | Msa1040120 | 0.810590 | 1.068548e-50 | -8.615850e-47 |
| Msa0518610 | Msa1055280 | 0.815552 | 8.719920e-52 | -8.615850e-47 |
| Msa0518610 | Msa1068200 | -0.809476 | 1.857226e-50 | -8.615850e-47 |
| Msa0518610 | Msa1073110 | -0.816039 | 6.791683e-52 | -8.615850e-47 |
| Msa0518610 | Msa1075220 | -0.817502 | 3.189454e-52 | -8.615850e-47 |
| Msa0518610 | Msa1076680 | 0.822092 | 2.849294e-53 | -8.615850e-47 |
| Msa0518610 | Msa1081600 | 0.805469 | 1.314816e-49 | -8.615850e-47 |
| Msa0518610 | Msa1083410 | 0.842324 | 2.772473e-58 | -8.615850e-47 |
| Msa0518610 | Msa1087470 | 0.802831 | 4.655291e-49 | -8.615850e-47 |
| Msa0518610 | Msa1087530 | 0.809749 | 1.622550e-50 | -8.615850e-47 |
| Msa0518610 | Msa1098560 | 0.858304 | 9.033996e-63 | -8.615850e-47 |
| Msa0518610 | Msa1099030 | 0.842238 | 2.921144e-58 | -8.615850e-47 |
| Msa0518610 | Msa1104000 | 0.823098 | 1.663251e-53 | -8.615850e-47 |
| Msa0518610 | Msa1128160 | 0.818925 | 1.519343e-52 | -8.615850e-47 |
| Msa0518610 | Msa1129720 | 0.800779 | 1.228142e-48 | -8.615850e-47 |
| Msa0518610 | Msa1130270 | -0.801491 | 8.782819e-49 | -8.615850e-47 |
| Msa0518610 | Msa1147570 | 0.822996 | 1.756472e-53 | -8.615850e-47 |
| Msa0518610 | Msa1151730 | 0.828331 | 9.539873e-55 | -8.615850e-47 |
| Msa0518610 | Msa1162550 | -0.815119 | 1.088194e-51 | -8.615850e-47 |
| Msa0518610 | Msa1165360 | 0.814527 | 1.472024e-51 | -8.615850e-47 |
| Msa0518610 | Msa1166370 | 0.808268 | 3.366850e-50 | -8.615850e-47 |
| Msa0518610 | Msa1188860 | 0.801935 | 7.120797e-49 | -8.615850e-47 |
| Msa0518610 | Msa1201990 | 0.808535 | 2.953387e-50 | -8.615850e-47 |
| Msa0518610 | Msa1220230 | 0.828046 | 1.117804e-54 | -8.615850e-47 |
| Msa0518610 | Msa1222970 | 0.812090 | 5.049927e-51 | -8.615850e-47 |
| Msa0518610 | Msa1228210 | 0.825697 | 4.070589e-54 | -8.615850e-47 |
| Msa0518610 | Msa1269080 | 0.845350 | 4.289335e-59 | -8.615850e-47 |
| Msa0518610 | Msa1271280 | 0.824740 | 6.852050e-54 | -8.615850e-47 |
| Msa0518610 | Msa1271300 | 0.815971 | 7.033320e-52 | -8.615850e-47 |
| Msa0518610 | Msa1278840 | 0.856038 | 4.213924e-62 | -8.615850e-47 |
| Msa0518610 | Msa1280130 | 0.829483 | 5.020270e-55 | -8.615850e-47 |
| Msa0518610 | Msa1284140 | 0.809317 | 2.008867e-50 | -8.615850e-47 |
| Msa0518610 | Msa1316620 | 0.804003 | 2.661352e-49 | -8.615850e-47 |
| Msa0518610 | Msa1318240 | 0.845927 | 2.991870e-59 | -8.615850e-47 |
| Msa0518610 | Msa1329990 | 0.808442 | 3.090598e-50 | -8.615850e-47 |
| Msa0518610 | Msa1355260 | 0.800381 | 1.479982e-48 | -8.615850e-47 |
| Msa0518610 | Msa1363890 | 0.843706 | 1.188262e-58 | -8.615850e-47 |
| Msa0518610 | Msa1367080 | 0.803635 | 3.172328e-49 | -8.615850e-47 |
| Msa0518610 | Msa1371960 | 0.802561 | 5.291337e-49 | -8.615850e-47 |
| Msa0518610 | Msa1373950 | 0.808984 | 2.367012e-50 | -8.615850e-47 |
| Msa0518610 | Msa1408790 | 0.808097 | 3.662018e-50 | -8.615850e-47 |
| Msa0518610 | Msa1409520 | 0.804297 | 2.311395e-49 | -8.615850e-47 |
| Msa0518610 | Msa1414740 | 0.824535 | 7.656548e-54 | -8.615850e-47 |
| Msa0518610 | Msa1427760 | 0.802200 | 6.280899e-49 | -8.615850e-47 |
| Msa0518610 | Msa1436040 | 0.807070 | 6.048285e-50 | -8.615850e-47 |
| Msa0518610 | Msa1453710 | 0.818675 | 1.731784e-52 | -8.615850e-47 |
| Msa0518610 | Msa1457670 | -0.807662 | 4.530285e-50 | -8.615850e-47 |
| Msa0518610 | Msa1461250 | -0.800826 | 1.201320e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518610 | MtrunA17_Chr3g0130811 | 90.723 | 636 | 50 | 1 | 1 | 636 | 1 | 627 | 0.0 | 1119 |
| Msa0518610 | MtrunA17_Chr8g0384881 | 62.188 | 521 | 153 | 6 | 1 | 501 | 1 | 497 | 0.0 | 556 |
| Msa0518610 | MtrunA17_Chr8g0384881 | 49.724 | 181 | 81 | 2 | 474 | 654 | 379 | 549 | 4.17e-36 | 144 |
| Msa0518610 | MtrunA17_Chr1g0159951 | 42.466 | 584 | 291 | 11 | 48 | 609 | 126 | 686 | 2.20e-105 | 338 |
| Msa0518610 | MtrunA17_Chr3g0142411 | 42.035 | 226 | 108 | 3 | 64 | 266 | 93 | 318 | 6.79e-37 | 148 |
| Msa0518610 | MtrunA17_Chr1g0156371 | 32.181 | 376 | 197 | 9 | 1 | 338 | 1 | 356 | 1.21e-33 | 138 |
| Msa0518610 | MtrunA17_Chr5g0405291 | 33.445 | 299 | 166 | 5 | 1 | 266 | 1 | 299 | 6.45e-30 | 125 |
| Msa0518610 | MtrunA17_Chr4g0053121 | 33.916 | 286 | 130 | 6 | 1 | 258 | 1 | 255 | 3.88e-29 | 124 |
| Msa0518610 | MtrunA17_Chr5g0401911 | 28.467 | 411 | 215 | 13 | 1 | 389 | 1 | 354 | 1.68e-23 | 105 |
| Msa0518610 | MtrunA17_Chr4g0044561 | 28.214 | 280 | 150 | 9 | 1 | 266 | 1 | 243 | 2.49e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0518610 | AT3G05270.3 | 40.816 | 637 | 288 | 13 | 1 | 621 | 1 | 564 | 1.11e-111 | 349 |
| Msa0518610 | AT3G05270.2 | 40.816 | 637 | 288 | 13 | 1 | 621 | 1 | 564 | 1.11e-111 | 349 |
| Msa0518610 | AT3G05270.1 | 40.816 | 637 | 288 | 13 | 1 | 621 | 1 | 564 | 1.11e-111 | 349 |
| Msa0518610 | AT1G77580.1 | 45.190 | 343 | 136 | 6 | 46 | 387 | 8 | 299 | 3.87e-71 | 243 |
| Msa0518610 | AT1G77580.4 | 45.190 | 343 | 136 | 6 | 46 | 387 | 8 | 299 | 9.09e-70 | 241 |
| Msa0518610 | AT1G77580.2 | 45.190 | 343 | 136 | 6 | 46 | 387 | 42 | 333 | 1.04e-69 | 242 |
| Msa0518610 | AT1G77580.3 | 45.190 | 343 | 136 | 6 | 46 | 387 | 42 | 333 | 1.04e-69 | 242 |
| Msa0518610 | AT1G21810.3 | 36.364 | 550 | 235 | 17 | 79 | 601 | 13 | 474 | 1.13e-60 | 214 |
| Msa0518610 | AT1G21810.1 | 36.364 | 550 | 235 | 17 | 79 | 601 | 13 | 474 | 1.13e-60 | 214 |
| Msa0518610 | AT1G19835.6 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT1G19835.5 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT1G19835.3 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT1G19835.1 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT1G19835.4 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT1G19835.2 | 34.675 | 323 | 180 | 5 | 1 | 296 | 1 | 319 | 3.42e-37 | 149 |
| Msa0518610 | AT4G36120.2 | 33.887 | 301 | 166 | 4 | 1 | 268 | 1 | 301 | 1.30e-30 | 129 |
| Msa0518610 | AT4G36120.1 | 33.887 | 301 | 166 | 4 | 1 | 268 | 1 | 301 | 1.30e-30 | 129 |
| Msa0518610 | AT1G47900.3 | 36.842 | 228 | 121 | 3 | 64 | 268 | 114 | 341 | 4.24e-28 | 121 |
| Msa0518610 | AT1G47900.1 | 36.842 | 228 | 121 | 3 | 64 | 268 | 114 | 341 | 4.24e-28 | 121 |
| Msa0518610 | AT1G47900.2 | 36.842 | 228 | 121 | 3 | 64 | 268 | 114 | 341 | 4.50e-28 | 121 |
| Msa0518610 | AT1G21810.2 | 33.729 | 421 | 177 | 18 | 211 | 601 | 3 | 351 | 1.23e-27 | 117 |
| Msa0518610 | AT2G23360.1 | 33.333 | 237 | 135 | 4 | 53 | 266 | 16 | 252 | 4.05e-17 | 86.3 |
Find 165 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAACAACTCTTGTAAT+TGG | 0.137119 | 3_4:+70451300 | Msa0518610:CDS |
| TCATAAACCATCTTATATTT+TGG | 0.149682 | 3_4:+70452963 | Msa0518610:three_prime_UTR |
| CCAGATTCCAGAAAATATTT+TGG | 0.153566 | 3_4:+70452908 | Msa0518610:three_prime_UTR |
| CCACTCAAGCTCGTCTCTTT+TGG | 0.200759 | 3_4:-70451327 | None:intergenic |
| GGCTTTGTCTGCTGATAATT+TGG | 0.210676 | 3_4:+70452600 | Msa0518610:CDS |
| GTAGGGACCATTTGTGGATT+TGG | 0.220541 | 3_4:-70449422 | None:intergenic |
| CTGCTTTACCAAATCTTCTT+TGG | 0.249118 | 3_4:-70450836 | None:intergenic |
| AAGAGAAAGCAAGCAATATT+TGG | 0.255370 | 3_4:+70451541 | Msa0518610:CDS |
| TCAGGGTGGAGGCGTGAAAT+TGG | 0.256871 | 3_4:+70449537 | Msa0518610:five_prime_UTR |
| GTAATACCTCGAGCTGCTTT+TGG | 0.280342 | 3_4:-70452084 | None:intergenic |
| TAGGGACCATTTGTGGATTT+GGG | 0.282405 | 3_4:-70449421 | None:intergenic |
| AGTCTCATAGACGGTTTAAA+TGG | 0.285979 | 3_4:+70453553 | Msa0518610:three_prime_UTR |
| TGCTTTCTCTTTCTGCAGCT+TGG | 0.289852 | 3_4:-70451529 | None:intergenic |
| GCTTTCTCTTTCTGCAGCTT+GGG | 0.293528 | 3_4:-70451528 | None:intergenic |
| TCACCGCCATCTTGGGGAGC+TGG | 0.312775 | 3_4:-70453151 | None:intergenic |
| CTAAATCCATCTATTAGCTT+TGG | 0.314378 | 3_4:+70453217 | Msa0518610:three_prime_UTR |
| GTCTGCTTCAATTACAGAAT+TGG | 0.315854 | 3_4:+70451802 | Msa0518610:CDS |
| GATCAAGTTAGTCATCTTAA+TGG | 0.317493 | 3_4:+70451206 | Msa0518610:CDS |
| TGATCTTCTGCAGAGGCTTC+AGG | 0.318270 | 3_4:+70451415 | Msa0518610:CDS |
| CAACTGCTCACCGCCATCTT+GGG | 0.319126 | 3_4:-70453158 | None:intergenic |
| GCAGTATTTCAGTGTCTTGA+TGG | 0.319413 | 3_4:-70452678 | None:intergenic |
| CACCGCCATCTTGGGGAGCT+GGG | 0.323771 | 3_4:-70453150 | None:intergenic |
| ATCAAGTTAGTCATCTTAAT+GGG | 0.324475 | 3_4:+70451207 | Msa0518610:CDS |
| CATTAGTGCCAAAGAAGATT+TGG | 0.331279 | 3_4:+70450828 | Msa0518610:CDS |
| CAGGGTGGAGGCGTGAAATT+GGG | 0.334375 | 3_4:+70449538 | Msa0518610:five_prime_UTR |
| CAAACTCCTTCCCGGCAAAA+AGG | 0.338349 | 3_4:-70453442 | None:intergenic |
| GGAGAAGAAGCTAGCGAAAA+TGG | 0.341125 | 3_4:+70452021 | Msa0518610:CDS |
| GGTTGGTCTGATGCAGTATC+TGG | 0.344154 | 3_4:-70451929 | None:intergenic |
| TGTTCTGCTCAAGACCTTGT+AGG | 0.358228 | 3_4:-70453271 | None:intergenic |
| AATGTTCAAGCAGGTAAGTT+TGG | 0.363999 | 3_4:+70452726 | Msa0518610:CDS |
| ACTGATGTGCATACTCTAAC+TGG | 0.369885 | 3_4:+70450781 | Msa0518610:CDS |
| GCAGCCACGGAAATGACTTC+TGG | 0.375082 | 3_4:-70450739 | None:intergenic |
| TCAACTGCTCACCGCCATCT+TGG | 0.379423 | 3_4:-70453159 | None:intergenic |
| GACAGCTTCTTCAGCAACTT+TGG | 0.380920 | 3_4:-70450863 | None:intergenic |
| ACAGATAGCATGTCAGATAA+TGG | 0.389217 | 3_4:+70451689 | Msa0518610:CDS |
| TACAAGGTCTTGAGCAGAAC+AGG | 0.395141 | 3_4:+70453273 | Msa0518610:three_prime_UTR |
| GATGGATGATTTCCTCGAAA+TGG | 0.408615 | 3_4:+70451889 | Msa0518610:CDS |
| TTCCCTGGCCAACATTTGGT+TGG | 0.409152 | 3_4:-70451946 | None:intergenic |
| CAGCAAGCCTTTCCATTTCG+AGG | 0.412193 | 3_4:-70451901 | None:intergenic |
| GAAAGTGATATGCGTAAATT+CGG | 0.418055 | 3_4:+70451731 | Msa0518610:CDS |
| GCATGATTCAAACTCCTTCC+CGG | 0.419206 | 3_4:-70453450 | None:intergenic |
| TGCAAACAACTCTTGTAATT+GGG | 0.422194 | 3_4:+70451301 | Msa0518610:CDS |
| TGTGAATGACTCTGCATAAA+CGG | 0.424603 | 3_4:-70451669 | None:intergenic |
| TCTGTTCCCTGGCCAACATT+TGG | 0.426822 | 3_4:-70451950 | None:intergenic |
| TCATCTTAATGGGGAACTAA+AGG | 0.428665 | 3_4:+70451217 | Msa0518610:CDS |
| GGCCATGAGTCATAATGCTT+TGG | 0.432790 | 3_4:-70451779 | None:intergenic |
| ACTTGATTCAGAGGACACTA+TGG | 0.441112 | 3_4:+70453105 | Msa0518610:three_prime_UTR |
| TAAAATTCAAAACCATTGAA+TGG | 0.442991 | 3_4:+70451495 | Msa0518610:CDS |
| CTGCATAGGGAAGGTATTGA+TGG | 0.443757 | 3_4:+70452697 | Msa0518610:CDS |
| TTTGTTTACTCTCGAATTCA+GGG | 0.446048 | 3_4:+70449520 | Msa0518610:five_prime_UTR |
| TTTGGCCAAGTGTGAAAAGT+TGG | 0.448967 | 3_4:+70452618 | Msa0518610:CDS |
| AAAATTCAAAACCATTGAAT+GGG | 0.454203 | 3_4:+70451496 | Msa0518610:CDS |
| GGTGCTCAAATCCCATTCAA+TGG | 0.455832 | 3_4:-70451507 | None:intergenic |
| TCTGCAGAGGCTTCAGGATG+TGG | 0.457307 | 3_4:+70451421 | Msa0518610:CDS |
| GTTGAAGTCCCTTGCAACAT+TGG | 0.462272 | 3_4:+70453072 | Msa0518610:three_prime_UTR |
| AACGGTTATGTGGAGTGAAA+GGG | 0.467551 | 3_4:-70449605 | None:intergenic |
| TAGGAGGTAGGGACCATTTG+TGG | 0.467918 | 3_4:-70449428 | None:intergenic |
| TAACGGTTATGTGGAGTGAA+AGG | 0.469155 | 3_4:-70449606 | None:intergenic |
| AAGATTATCTGCTCATGATC+AGG | 0.469911 | 3_4:+70449878 | Msa0518610:CDS |
| ACGTGTATAAATCTAAACTT+AGG | 0.476551 | 3_4:+70453364 | Msa0518610:three_prime_UTR |
| AGACCAACCAAATGTTGGCC+AGG | 0.478188 | 3_4:+70451943 | Msa0518610:CDS |
| AGAAGAACTGTGAGTTTCAC+TGG | 0.479117 | 3_4:-70449832 | None:intergenic |
| AGATAATGGAGAGAGGCTAT+TGG | 0.482617 | 3_4:+70451703 | Msa0518610:CDS |
| AGTTGTTTGCAACAGCTTCA+AGG | 0.483000 | 3_4:-70451289 | None:intergenic |
| CCGGGTAAAGGAAGCAGAGT+TGG | 0.490552 | 3_4:+70452111 | Msa0518610:CDS |
| TTAAGACCCAAATCCACAAA+TGG | 0.495797 | 3_4:+70449415 | None:intergenic |
| ACCACTGCACAAAACCGTAT+TGG | 0.496783 | 3_4:+70451845 | Msa0518610:CDS |
| TACTCTCGAATTCAGGGTGG+AGG | 0.498969 | 3_4:+70449526 | Msa0518610:five_prime_UTR |
| GTTGCTGAAGAAGCTGTCTC+AGG | 0.501906 | 3_4:+70450868 | Msa0518610:CDS |
| CATACACTGTGTCTGTTCCC+TGG | 0.502835 | 3_4:-70451961 | None:intergenic |
| GGTATCACAAAGTCGGGTAA+AGG | 0.503164 | 3_4:+70452381 | Msa0518610:CDS |
| AGCTCGAGGTATTACAAGGC+CGG | 0.505834 | 3_4:+70452092 | Msa0518610:CDS |
| GCTCAAGGTATCACAAAGTC+GGG | 0.506661 | 3_4:+70452375 | Msa0518610:CDS |
| TCGGGTAAAGGAAGCGGAGT+TGG | 0.507512 | 3_4:+70452393 | Msa0518610:CDS |
| GCATCATTTGATGCAGGAGA+AGG | 0.510214 | 3_4:+70452985 | Msa0518610:three_prime_UTR |
| TATAGATGGAACGAAGGAGT+TGG | 0.511290 | 3_4:+70449778 | Msa0518610:intron |
| AACTGCTCACCGCCATCTTG+GGG | 0.513505 | 3_4:-70453157 | None:intergenic |
| CCAAAAGAGACGAGCTTGAG+TGG | 0.515425 | 3_4:+70451327 | Msa0518610:CDS |
| TTCAACTCAGATCGATCTGA+TGG | 0.516137 | 3_4:+70451871 | Msa0518610:CDS |
| TTGGTAGGTTCTATCCTACA+AGG | 0.519182 | 3_4:+70453257 | Msa0518610:three_prime_UTR |
| ATATGCGTAAATTCGGAGGC+AGG | 0.521010 | 3_4:+70451738 | Msa0518610:CDS |
| TGAATTCGAGAGTAAACAAA+AGG | 0.521371 | 3_4:-70449517 | None:intergenic |
| GGTATTACAAGGCCGGGTAA+AGG | 0.522637 | 3_4:+70452099 | Msa0518610:CDS |
| CACTAATGTTATGTCATGGA+CGG | 0.525655 | 3_4:-70453486 | None:intergenic |
| AATGATGCCAAAATATAAGA+TGG | 0.526333 | 3_4:-70452970 | None:intergenic |
| ACAGGAAGACATTGTAAAAG+AGG | 0.528423 | 3_4:+70453291 | Msa0518610:three_prime_UTR |
| GAGCCACGACATTCAATCTC+TGG | 0.528546 | 3_4:-70451601 | None:intergenic |
| AGACAGGGACAAATAATTGA+AGG | 0.530202 | 3_4:-70449475 | None:intergenic |
| AGGAAGAGATTGACAAAGAG+CGG | 0.530251 | 3_4:+70452296 | Msa0518610:CDS |
| AGACACTGAAATACTGCATA+GGG | 0.534338 | 3_4:+70452684 | Msa0518610:CDS |
| CATTCTCTGTCAACGATCGC+AGG | 0.538257 | 3_4:+70451630 | Msa0518610:CDS |
| TCTGAGTTGAAAGGCCAATA+CGG | 0.539705 | 3_4:-70451859 | None:intergenic |
| GGTAAAGGAAGCGGAGTTGG+AGG | 0.539727 | 3_4:+70452396 | Msa0518610:CDS |
| AGGAAGAGATTGAGAAAGAG+CGG | 0.539922 | 3_4:+70452578 | Msa0518610:CDS |
| ATGTGGAGTGAAAGGGATGA+GGG | 0.540250 | 3_4:-70449598 | None:intergenic |
| CGGAAAACCATCGAATCTCT+AGG | 0.540417 | 3_4:+70453043 | Msa0518610:three_prime_UTR |
| ACCGCCATCTTGGGGAGCTG+GGG | 0.541230 | 3_4:-70453149 | None:intergenic |
| CTCTTCATTTGACGCAGCCA+CGG | 0.542038 | 3_4:-70450752 | None:intergenic |
| AGCTCAAGGTATCACAAAGT+CGG | 0.543179 | 3_4:+70452374 | Msa0518610:CDS |
| GGTTCAAAAGAATGATGCAT+TGG | 0.543300 | 3_4:+70452000 | Msa0518610:CDS |
| GGGAACTAAAGGATTGTATG+AGG | 0.545681 | 3_4:+70451228 | Msa0518610:CDS |
| GTGGAAAGTTACTGAGCTTG+AGG | 0.546401 | 3_4:+70451346 | Msa0518610:CDS |
| ATTATATTTAGGCTGGGAGA+AGG | 0.546698 | 3_4:+70451115 | Msa0518610:intron |
| ACTAATGTTATGTCATGGAC+GGG | 0.547239 | 3_4:-70453485 | None:intergenic |
| CTGCTGTCCTAGAGATTCGA+TGG | 0.547891 | 3_4:-70453050 | None:intergenic |
| GAGGCTTCAGGATGTGGAGA+GGG | 0.549030 | 3_4:+70451427 | Msa0518610:CDS |
| TATGTGGAGTGAAAGGGATG+AGG | 0.549470 | 3_4:-70449599 | None:intergenic |
| AGACACAGTGTATGCTGAAG+TGG | 0.551827 | 3_4:+70451970 | Msa0518610:CDS |
| GCAGGAGAAGGAACTAGCAT+TGG | 0.555868 | 3_4:+70452997 | Msa0518610:three_prime_UTR |
| AGACTTCATACTTGATTCAG+AGG | 0.557101 | 3_4:+70453096 | Msa0518610:three_prime_UTR |
| ACAAAGTCGGGTAAAGGAAG+CGG | 0.558654 | 3_4:+70452387 | Msa0518610:CDS |
| AACCAAAGCATTATGACTCA+TGG | 0.559723 | 3_4:+70451777 | Msa0518610:CDS |
| GGTAAAGGAAGCAGAGTTGG+AGG | 0.562324 | 3_4:+70452114 | Msa0518610:CDS |
| GGAAGAGATTGACAAAGAGC+GGG | 0.567707 | 3_4:+70452297 | Msa0518610:CDS |
| CGTGGCTGCGTCAAATGAAG+AGG | 0.568762 | 3_4:+70450753 | Msa0518610:CDS |
| CCAACTCTGCTTCCTTTACC+CGG | 0.569027 | 3_4:-70452111 | None:intergenic |
| TGGCGAGTTAATGTTCAAGC+AGG | 0.569151 | 3_4:+70452717 | Msa0518610:CDS |
| GCTCGAGGTATTACAAGGCC+GGG | 0.574482 | 3_4:+70452093 | Msa0518610:CDS |
| TGCAGATAAACTCGAGCTAG+AGG | 0.575538 | 3_4:+70452327 | Msa0518610:CDS |
| GGAAGAGATTGAGAAAGAGC+GGG | 0.579765 | 3_4:+70452579 | Msa0518610:CDS |
| AAGACACTGAAATACTGCAT+AGG | 0.582843 | 3_4:+70452683 | Msa0518610:CDS |
| TGATTAGTTAGTCTCATAGA+CGG | 0.583433 | 3_4:+70453544 | Msa0518610:three_prime_UTR |
| ACTGAGAGCTGCTCAAACTG+AGG | 0.583542 | 3_4:+70452240 | Msa0518610:CDS |
| ACTGAGAGCTGCTCAAACTG+AGG | 0.583542 | 3_4:+70452522 | Msa0518610:CDS |
| GGAGGCAGGGAGATAAATGA+AGG | 0.583949 | 3_4:+70451752 | Msa0518610:CDS |
| ATGATTTCCTCGAAATGGAA+AGG | 0.588479 | 3_4:+70451894 | Msa0518610:CDS |
| TGAAGTCTTCCAATGTTGCA+AGG | 0.589752 | 3_4:-70453081 | None:intergenic |
| ACAACCCCAGCTCCCCAAGA+TGG | 0.590488 | 3_4:+70453145 | Msa0518610:three_prime_UTR |
| AAGCAGCTCGAGGTATTACA+AGG | 0.592236 | 3_4:+70452088 | Msa0518610:CDS |
| TGGAACGAAGGAGTTGGATG+TGG | 0.592305 | 3_4:+70449784 | Msa0518610:CDS |
| ACGGAAATGACTTCTGGAGA+TGG | 0.595138 | 3_4:-70450733 | None:intergenic |
| AGGGTGGAGGCGTGAAATTG+GGG | 0.597128 | 3_4:+70449539 | Msa0518610:five_prime_UTR |
| GAAACACTAATGTTATGTCA+TGG | 0.597451 | 3_4:-70453490 | None:intergenic |
| TCAGATCGATCTGAGTTGAA+AGG | 0.597854 | 3_4:-70451868 | None:intergenic |
| GCATCAGACCAACCAAATGT+TGG | 0.607554 | 3_4:+70451938 | Msa0518610:CDS |
| TAATGGAGAGAGGCTATTGG+TGG | 0.608912 | 3_4:+70451706 | Msa0518610:CDS |
| ATCTCCAGAAGTCATTTCCG+TGG | 0.609448 | 3_4:+70450735 | Msa0518610:CDS |
| AGAACCTACCAAAACTGAAG+TGG | 0.609934 | 3_4:-70453246 | None:intergenic |
| GACCAACCAAATGTTGGCCA+GGG | 0.612070 | 3_4:+70451944 | Msa0518610:CDS |
| GAAGTCTTCCAATGTTGCAA+GGG | 0.615238 | 3_4:-70453080 | None:intergenic |
| AGAGGCTTCAGGATGTGGAG+AGG | 0.619121 | 3_4:+70451426 | Msa0518610:CDS |
| TATTATTATAGATGGAACGA+AGG | 0.620108 | 3_4:+70449772 | Msa0518610:intron |
| GGCACTAATGTCTAAGAGAG+CGG | 0.621884 | 3_4:-70450815 | None:intergenic |
| TGGAGATGGAACAGTTTGAG+TGG | 0.623998 | 3_4:-70450719 | None:intergenic |
| AGATAAAATTGAGCTAGAGA+TGG | 0.626676 | 3_4:+70452048 | Msa0518610:CDS |
| GTATGCTGAAGTGGAAGCAT+TGG | 0.628182 | 3_4:+70451979 | Msa0518610:CDS |
| ACCCCAGCTCCCCAAGATGG+CGG | 0.628407 | 3_4:+70453148 | Msa0518610:three_prime_UTR |
| GAGAGCTGCTCAAACTGAGG+CGG | 0.637369 | 3_4:+70452243 | Msa0518610:CDS |
| TTAACTCTGATCTTCTGCAG+AGG | 0.638024 | 3_4:+70451408 | Msa0518610:CDS |
| TTTGGAGAGTATAACGAAGG+TGG | 0.647288 | 3_4:+70451559 | Msa0518610:CDS |
| TATGCGTAAATTCGGAGGCA+GGG | 0.647344 | 3_4:+70451739 | Msa0518610:CDS |
| AATTCTGTAATTGAAGCAGA+CGG | 0.653774 | 3_4:-70451800 | None:intergenic |
| TGCTGCAAAACAGCAAAATG+CGG | 0.660097 | 3_4:+70451175 | Msa0518610:CDS |
| AGATAAACTCGAGCTAGAGG+TGG | 0.661721 | 3_4:+70452330 | Msa0518610:CDS |
| TGAACTACAATCTCGACTCG+AGG | 0.662262 | 3_4:+70451469 | Msa0518610:CDS |
| TCAAGTTAGTCATCTTAATG+GGG | 0.667984 | 3_4:+70451208 | Msa0518610:CDS |
| AGTGATATGCGTAAATTCGG+AGG | 0.673306 | 3_4:+70451734 | Msa0518610:CDS |
| ACTGAAATACTGCATAGGGA+AGG | 0.673392 | 3_4:+70452688 | Msa0518610:CDS |
| GCATGTCAGATAATGGAGAG+AGG | 0.673908 | 3_4:+70451696 | Msa0518610:CDS |
| CGAGTGCCAAAAGCAGCTCG+AGG | 0.681288 | 3_4:+70452078 | Msa0518610:CDS |
| GTGCCAGAGATTGAATGTCG+TGG | 0.689035 | 3_4:+70451598 | Msa0518610:CDS |
| ACTAATGTCTAAGAGAGCGG+CGG | 0.698941 | 3_4:-70450812 | None:intergenic |
| GTTTACTCTCGAATTCAGGG+TGG | 0.699348 | 3_4:+70449523 | Msa0518610:five_prime_UTR |
| GAAGAAGCTAGCGAAAATGG+AGG | 0.702295 | 3_4:+70452024 | Msa0518610:CDS |
| ATATTTGGAGAGTATAACGA+AGG | 0.713817 | 3_4:+70451556 | Msa0518610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGAATTGAATATTATTTA+AGG | - | chr3_4:70450385-70450404 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATAAACCATAA+CGG | - | chr3_4:70451024-70451043 | None:intergenic | 10.0% |
| !!! | AGTTATTTTAGATATTAAGT+TGG | + | chr3_4:70449734-70449753 | Msa0518610:intron | 15.0% |
| !! | TACTGAATTATTATTATAGA+TGG | + | chr3_4:70449764-70449783 | Msa0518610:intron | 15.0% |
| !!! | TTACATGATTTTAAGTTTAT+AGG | + | chr3_4:70450541-70450560 | Msa0518610:intron | 15.0% |
| !!! | CATTGTTTTATTTTATTCTA+CGG | + | chr3_4:70450575-70450594 | Msa0518610:intron | 15.0% |
| !!! | GCTTAGAATTTACTTTTTAA+CGG | - | chr3_4:70449626-70449645 | None:intergenic | 20.0% |
| !!! | TTAACTTCTATTTTCAATAC+AGG | + | chr3_4:70449927-70449946 | Msa0518610:intron | 20.0% |
| !!! | ATTCAACAAGGTTTTTAATA+GGG | - | chr3_4:70450497-70450516 | None:intergenic | 20.0% |
| !! | AATATTAATATAGCAGTCTT+TGG | - | chr3_4:70451093-70451112 | None:intergenic | 20.0% |
| !! | ATATTTGATTATATTTAGGC+TGG | + | chr3_4:70451108-70451127 | Msa0518610:intron | 20.0% |
| !! | TATTTGATTATATTTAGGCT+GGG | + | chr3_4:70451109-70451128 | Msa0518610:intron | 20.0% |
| !! | TAAAATTCAAAACCATTGAA+TGG | + | chr3_4:70451495-70451514 | Msa0518610:CDS | 20.0% |
| !! | AAAATTCAAAACCATTGAAT+GGG | + | chr3_4:70451496-70451515 | Msa0518610:CDS | 20.0% |
| !!! | AGTTAAAATTTTAACATGTG+AGG | + | chr3_4:70452883-70452902 | Msa0518610:three_prime_UTR | 20.0% |
| !!! | CAAAATTCCAAAATATTTTC+TGG | - | chr3_4:70452918-70452937 | None:intergenic | 20.0% |
| !!! | CAGAAAATATTTTGGAATTT+TGG | + | chr3_4:70452916-70452935 | Msa0518610:three_prime_UTR | 20.0% |
| !!! | TCATAAACCATCTTATATTT+TGG | + | chr3_4:70452963-70452982 | Msa0518610:three_prime_UTR | 20.0% |
| ! | AAAAACAAAAACATCATAGG+AGG | - | chr3_4:70449447-70449466 | None:intergenic | 25.0% |
| ! | CAGAAAAACAAAAACATCAT+AGG | - | chr3_4:70449450-70449469 | None:intergenic | 25.0% |
| ! | TCATCACTAATTAAAAGACA+GGG | - | chr3_4:70449493-70449512 | None:intergenic | 25.0% |
| ! | ATCATCACTAATTAAAAGAC+AGG | - | chr3_4:70449494-70449513 | None:intergenic | 25.0% |
| !!! | TTTACTTTTTAACGGTTATG+TGG | - | chr3_4:70449618-70449637 | None:intergenic | 25.0% |
| !! | TCTTTTTATATATTAGCACC+AGG | + | chr3_4:70449687-70449706 | Msa0518610:intron | 25.0% |
| ! | TATTATTATAGATGGAACGA+AGG | + | chr3_4:70449772-70449791 | Msa0518610:intron | 25.0% |
| ! | TAGTAACTAGTAACCATATT+TGG | + | chr3_4:70450020-70450039 | Msa0518610:intron | 25.0% |
| !!! | AGGTTGTCATTTTTGTTAAT+AGG | + | chr3_4:70450049-70450068 | Msa0518610:intron | 25.0% |
| ! | CTCTCATTAAAACAAAATTG+AGG | + | chr3_4:70450128-70450147 | Msa0518610:intron | 25.0% |
| ! | AATGACATAATTCAATGTGT+CGG | - | chr3_4:70450280-70450299 | None:intergenic | 25.0% |
| !! | GATTCAACAAGGTTTTTAAT+AGG | - | chr3_4:70450498-70450517 | None:intergenic | 25.0% |
| ! | AATGAAGGAGAAGTTTAAAA+TGG | - | chr3_4:70450908-70450927 | None:intergenic | 25.0% |
| !! | TTTTAAACTTCTCCTTCATT+TGG | + | chr3_4:70450908-70450927 | Msa0518610:intron | 25.0% |
| ! | AATCAGACCAAAAAACAAAA+AGG | - | chr3_4:70450977-70450996 | None:intergenic | 25.0% |
| ! | ACCTAATATCATCTAAACAT+AGG | + | chr3_4:70451055-70451074 | Msa0518610:intron | 25.0% |
| ! | ACCTATGTTTAGATGATATT+AGG | - | chr3_4:70451059-70451078 | None:intergenic | 25.0% |
| ! | ATCTAAACATAGGTTATCAA+AGG | + | chr3_4:70451065-70451084 | Msa0518610:intron | 25.0% |
| ! | ATCAAGTTAGTCATCTTAAT+GGG | + | chr3_4:70451207-70451226 | Msa0518610:CDS | 25.0% |
| ! | AATGATGCCAAAATATAAGA+TGG | - | chr3_4:70452973-70452992 | None:intergenic | 25.0% |
| ! | ACGTGTATAAATCTAAACTT+AGG | + | chr3_4:70453364-70453383 | Msa0518610:three_prime_UTR | 25.0% |
| !! | CATAAATTTTTCCTTTTTGC+CGG | + | chr3_4:70453431-70453450 | Msa0518610:three_prime_UTR | 25.0% |
| !! | ATAAATTTTTCCTTTTTGCC+GGG | + | chr3_4:70453432-70453451 | Msa0518610:three_prime_UTR | 25.0% |
| TGAATTCGAGAGTAAACAAA+AGG | - | chr3_4:70449520-70449539 | None:intergenic | 30.0% | |
| !! | TTTTGTTTACTCTCGAATTC+AGG | + | chr3_4:70449519-70449538 | Msa0518610:five_prime_UTR | 30.0% |
| TTTGTTTACTCTCGAATTCA+GGG | + | chr3_4:70449520-70449539 | Msa0518610:five_prime_UTR | 30.0% | |
| AATAACGTAGCCAAAAAAAG+AGG | - | chr3_4:70449906-70449925 | None:intergenic | 30.0% | |
| ! | CTTCTATTTTCAATACAGGA+AGG | + | chr3_4:70449931-70449950 | Msa0518610:intron | 30.0% |
| ! | TATTTTCAATACAGGAAGGA+GGG | + | chr3_4:70449935-70449954 | Msa0518610:intron | 30.0% |
| ! | AAGGTTTTTAATAGGGACTT+GGG | - | chr3_4:70450490-70450509 | None:intergenic | 30.0% |
| CTTGTATTCTTGATTCAACA+AGG | - | chr3_4:70450509-70450528 | None:intergenic | 30.0% | |
| AGCAACAATTTGAACAATCA+GGG | - | chr3_4:70450643-70450662 | None:intergenic | 30.0% | |
| AAGCAACAATTTGAACAATC+AGG | - | chr3_4:70450644-70450663 | None:intergenic | 30.0% | |
| ! | AAATTGTTGCTTGTTTGAGA+CGG | + | chr3_4:70450652-70450671 | Msa0518610:intron | 30.0% |
| TAAAATTGACAGCCAAATGA+AGG | - | chr3_4:70450923-70450942 | None:intergenic | 30.0% | |
| !!! | GTATCGACCTTTTTGTTTTT+TGG | + | chr3_4:70450967-70450986 | Msa0518610:intron | 30.0% |
| GATCAAGTTAGTCATCTTAA+TGG | + | chr3_4:70451206-70451225 | Msa0518610:CDS | 30.0% | |
| TCAAGTTAGTCATCTTAATG+GGG | + | chr3_4:70451208-70451227 | Msa0518610:CDS | 30.0% | |
| TTGCAAACAACTCTTGTAAT+TGG | + | chr3_4:70451300-70451319 | Msa0518610:CDS | 30.0% | |
| TGCAAACAACTCTTGTAATT+GGG | + | chr3_4:70451301-70451320 | Msa0518610:CDS | 30.0% | |
| AAGAGAAAGCAAGCAATATT+TGG | + | chr3_4:70451541-70451560 | Msa0518610:CDS | 30.0% | |
| ! | ATATTTGGAGAGTATAACGA+AGG | + | chr3_4:70451556-70451575 | Msa0518610:CDS | 30.0% |
| GAAAGTGATATGCGTAAATT+CGG | + | chr3_4:70451731-70451750 | Msa0518610:CDS | 30.0% | |
| AATTCTGTAATTGAAGCAGA+CGG | - | chr3_4:70451803-70451822 | None:intergenic | 30.0% | |
| AGATAAAATTGAGCTAGAGA+TGG | + | chr3_4:70452048-70452067 | Msa0518610:CDS | 30.0% | |
| !!! | AGCTTTCTCATTTTTTTCTC+GGG | - | chr3_4:70452212-70452231 | None:intergenic | 30.0% |
| !!! | CAGCTTTCTCATTTTTTTCT+CGG | - | chr3_4:70452213-70452232 | None:intergenic | 30.0% |
| !!! | AGCATTCTCATTTTTTGCTT+GGG | - | chr3_4:70452494-70452513 | None:intergenic | 30.0% |
| !!! | CCAAAATATTTTCTGGAATC+TGG | - | chr3_4:70452911-70452930 | None:intergenic | 30.0% |
| ! | CCAGATTCCAGAAAATATTT+TGG | + | chr3_4:70452908-70452927 | Msa0518610:three_prime_UTR | 30.0% |
| ! | CTAAATCCATCTATTAGCTT+TGG | + | chr3_4:70453217-70453236 | Msa0518610:three_prime_UTR | 30.0% |
| ! | CTTTTTCCAAAGCTAATAGA+TGG | - | chr3_4:70453226-70453245 | None:intergenic | 30.0% |
| GAAACACTAATGTTATGTCA+TGG | - | chr3_4:70453493-70453512 | None:intergenic | 30.0% | |
| ! | TGATTAGTTAGTCTCATAGA+CGG | + | chr3_4:70453544-70453563 | Msa0518610:three_prime_UTR | 30.0% |
| CAAAAACATCATAGGAGGTA+GGG | - | chr3_4:70449442-70449461 | None:intergenic | 35.0% | |
| ACAAAAACATCATAGGAGGT+AGG | - | chr3_4:70449443-70449462 | None:intergenic | 35.0% | |
| AGACAGGGACAAATAATTGA+AGG | - | chr3_4:70449478-70449497 | None:intergenic | 35.0% | |
| TAGAAGTTCATAACTTGACC+TGG | - | chr3_4:70449708-70449727 | None:intergenic | 35.0% | |
| AAGATTATCTGCTCATGATC+AGG | + | chr3_4:70449878-70449897 | Msa0518610:CDS | 35.0% | |
| !!! | TGATCAGGTACCTCTTTTTT+TGG | + | chr3_4:70449893-70449912 | Msa0518610:intron | 35.0% |
| ! | CTATTTTCAATACAGGAAGG+AGG | + | chr3_4:70449934-70449953 | Msa0518610:intron | 35.0% |
| ! | ATTTTCAATACAGGAAGGAG+GGG | + | chr3_4:70449936-70449955 | Msa0518610:intron | 35.0% |
| GTAACCATATTTGGAAGTGA+AGG | + | chr3_4:70450029-70450048 | Msa0518610:intron | 35.0% | |
| ACAACCTTCACTTCCAAATA+TGG | - | chr3_4:70450036-70450055 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGAGAGATTG+AGG | + | chr3_4:70450078-70450097 | Msa0518610:intron | 35.0% | |
| AGAAGAAGAAGAGAGATTGA+GGG | + | chr3_4:70450079-70450098 | Msa0518610:intron | 35.0% | |
| ! | GAGGGAAAGCTAAAATGTTT+TGG | + | chr3_4:70450097-70450116 | Msa0518610:intron | 35.0% |
| !! | GCACCAATACTTTTGATTGA+AGG | + | chr3_4:70450216-70450235 | Msa0518610:intron | 35.0% |
| ! | ACGCCTTCAATCAAAAGTAT+TGG | - | chr3_4:70450222-70450241 | None:intergenic | 35.0% |
| ! | CAAGGTTTTTAATAGGGACT+TGG | - | chr3_4:70450491-70450510 | None:intergenic | 35.0% |
| AGGGATCTCAAACTTAAAAG+CGG | - | chr3_4:70450624-70450643 | None:intergenic | 35.0% | |
| CATTAGTGCCAAAGAAGATT+TGG | + | chr3_4:70450828-70450847 | Msa0518610:CDS | 35.0% | |
| CTGCTTTACCAAATCTTCTT+TGG | - | chr3_4:70450839-70450858 | None:intergenic | 35.0% | |
| ATTATATTTAGGCTGGGAGA+AGG | + | chr3_4:70451115-70451134 | Msa0518610:intron | 35.0% | |
| TCATCTTAATGGGGAACTAA+AGG | + | chr3_4:70451217-70451236 | Msa0518610:CDS | 35.0% | |
| TGTGAATGACTCTGCATAAA+CGG | - | chr3_4:70451672-70451691 | None:intergenic | 35.0% | |
| ACAGATAGCATGTCAGATAA+TGG | + | chr3_4:70451689-70451708 | Msa0518610:CDS | 35.0% | |
| ! | AACCAAAGCATTATGACTCA+TGG | + | chr3_4:70451777-70451796 | Msa0518610:CDS | 35.0% |
| GTCTGCTTCAATTACAGAAT+TGG | + | chr3_4:70451802-70451821 | Msa0518610:CDS | 35.0% | |
| ATGATTTCCTCGAAATGGAA+AGG | + | chr3_4:70451894-70451913 | Msa0518610:CDS | 35.0% | |
| GGTTCAAAAGAATGATGCAT+TGG | + | chr3_4:70452000-70452019 | Msa0518610:CDS | 35.0% | |
| GATCTCAAAAATCTGTTCAC+TGG | + | chr3_4:70452273-70452292 | Msa0518610:CDS | 35.0% | |
| !!! | CAGCATTCTCATTTTTTGCT+TGG | - | chr3_4:70452495-70452514 | None:intergenic | 35.0% |
| GATCTCAAAAATCTGTTCAC+TGG | + | chr3_4:70452273-70452292 | Msa0518610:CDS | 35.0% | |
| ! | TTCTTCCAACTTTTCACACT+TGG | - | chr3_4:70452626-70452645 | None:intergenic | 35.0% |
| AAGACACTGAAATACTGCAT+AGG | + | chr3_4:70452683-70452702 | Msa0518610:CDS | 35.0% | |
| AGACACTGAAATACTGCATA+GGG | + | chr3_4:70452684-70452703 | Msa0518610:CDS | 35.0% | |
| AATGTTCAAGCAGGTAAGTT+TGG | + | chr3_4:70452726-70452745 | Msa0518610:CDS | 35.0% | |
| ! | GCTAACAATCTCACTCTTTT+TGG | + | chr3_4:70452810-70452829 | Msa0518610:three_prime_UTR | 35.0% |
| ! | AACAATCTCACTCTTTTTGG+AGG | + | chr3_4:70452813-70452832 | Msa0518610:three_prime_UTR | 35.0% |
| !! | ATTTTGGCATCATTTGATGC+AGG | + | chr3_4:70452979-70452998 | Msa0518610:three_prime_UTR | 35.0% |
| AGACTTCATACTTGATTCAG+AGG | + | chr3_4:70453096-70453115 | Msa0518610:three_prime_UTR | 35.0% | |
| ACAGGAAGACATTGTAAAAG+AGG | + | chr3_4:70453291-70453310 | Msa0518610:three_prime_UTR | 35.0% | |
| ACTAATGTTATGTCATGGAC+GGG | - | chr3_4:70453488-70453507 | None:intergenic | 35.0% | |
| CACTAATGTTATGTCATGGA+CGG | - | chr3_4:70453489-70453508 | None:intergenic | 35.0% | |
| TAGGGACCATTTGTGGATTT+GGG | - | chr3_4:70449424-70449443 | None:intergenic | 40.0% | |
| AACGGTTATGTGGAGTGAAA+GGG | - | chr3_4:70449608-70449627 | None:intergenic | 40.0% | |
| TAACGGTTATGTGGAGTGAA+AGG | - | chr3_4:70449609-70449628 | None:intergenic | 40.0% | |
| TATAGATGGAACGAAGGAGT+TGG | + | chr3_4:70449778-70449797 | Msa0518610:intron | 40.0% | |
| AGAAGAACTGTGAGTTTCAC+TGG | - | chr3_4:70449835-70449854 | None:intergenic | 40.0% | |
| AGCTAGCTGTTCTTTGTGTT+TGG | + | chr3_4:70449971-70449990 | Msa0518610:intron | 40.0% | |
| GCTAGCTGTTCTTTGTGTTT+GGG | + | chr3_4:70449972-70449991 | Msa0518610:intron | 40.0% | |
| CTAGCTGTTCTTTGTGTTTG+GGG | + | chr3_4:70449973-70449992 | Msa0518610:intron | 40.0% | |
| CTAGTTACTACTACTACCCT+GGG | - | chr3_4:70450010-70450029 | None:intergenic | 40.0% | |
| ACTAGTTACTACTACTACCC+TGG | - | chr3_4:70450011-70450030 | None:intergenic | 40.0% | |
| !! | CAAAAGTATTGGTGCTACAG+AGG | - | chr3_4:70450211-70450230 | None:intergenic | 40.0% |
| CAAGCTATGAAGCACAAACA+CGG | - | chr3_4:70450342-70450361 | None:intergenic | 40.0% | |
| ! | ATGCCACTTAAATACTCCAC+CGG | + | chr3_4:70450415-70450434 | Msa0518610:intron | 40.0% |
| ! | TAGTATGACTATGAGGTGTC+CGG | - | chr3_4:70450437-70450456 | None:intergenic | 40.0% |
| ATAGGGACTTGGGTATTATG+AGG | - | chr3_4:70450480-70450499 | None:intergenic | 40.0% | |
| AACTTAAAAGCGGACAGAAC+AGG | - | chr3_4:70450614-70450633 | None:intergenic | 40.0% | |
| ACTGATGTGCATACTCTAAC+TGG | + | chr3_4:70450781-70450800 | Msa0518610:CDS | 40.0% | |
| ! | TTCAAGTTCTGTCTCCGTTA+TGG | + | chr3_4:70451007-70451026 | Msa0518610:intron | 40.0% |
| TGCTGCAAAACAGCAAAATG+CGG | + | chr3_4:70451175-70451194 | Msa0518610:CDS | 40.0% | |
| GGGAACTAAAGGATTGTATG+AGG | + | chr3_4:70451228-70451247 | Msa0518610:CDS | 40.0% | |
| AGTTGTTTGCAACAGCTTCA+AGG | - | chr3_4:70451292-70451311 | None:intergenic | 40.0% | |
| TTAACTCTGATCTTCTGCAG+AGG | + | chr3_4:70451408-70451427 | Msa0518610:CDS | 40.0% | |
| ! | TTTGGAGAGTATAACGAAGG+TGG | + | chr3_4:70451559-70451578 | Msa0518610:CDS | 40.0% |
| !! | AGATAATGGAGAGAGGCTAT+TGG | + | chr3_4:70451703-70451722 | Msa0518610:CDS | 40.0% |
| AGTGATATGCGTAAATTCGG+AGG | + | chr3_4:70451734-70451753 | Msa0518610:CDS | 40.0% | |
| ! | TCTGAGTTGAAAGGCCAATA+CGG | - | chr3_4:70451862-70451881 | None:intergenic | 40.0% |
| ! | TCAGATCGATCTGAGTTGAA+AGG | - | chr3_4:70451871-70451890 | None:intergenic | 40.0% |
| TTCAACTCAGATCGATCTGA+TGG | + | chr3_4:70451871-70451890 | Msa0518610:CDS | 40.0% | |
| GATGGATGATTTCCTCGAAA+TGG | + | chr3_4:70451889-70451908 | Msa0518610:CDS | 40.0% | |
| CTCAAAAATCTGTTCACTGG+AGG | + | chr3_4:70452276-70452295 | Msa0518610:CDS | 40.0% | |
| AGGAAGAGATTGACAAAGAG+CGG | + | chr3_4:70452296-70452315 | Msa0518610:CDS | 40.0% | |
| !! | GTGATACCTTGAGCTGTTTT+TGG | - | chr3_4:70452369-70452388 | None:intergenic | 40.0% |
| ! | AGCTCAAGGTATCACAAAGT+CGG | + | chr3_4:70452374-70452393 | Msa0518610:CDS | 40.0% |
| CTCAAAAATCTGTTCACTGG+AGG | + | chr3_4:70452276-70452295 | Msa0518610:CDS | 40.0% | |
| AGGAAGAGATTGAGAAAGAG+CGG | + | chr3_4:70452578-70452597 | Msa0518610:CDS | 40.0% | |
| ! | GGCTTTGTCTGCTGATAATT+TGG | + | chr3_4:70452600-70452619 | Msa0518610:CDS | 40.0% |
| TTTGGCCAAGTGTGAAAAGT+TGG | + | chr3_4:70452618-70452637 | Msa0518610:CDS | 40.0% | |
| GCAGTATTTCAGTGTCTTGA+TGG | - | chr3_4:70452681-70452700 | None:intergenic | 40.0% | |
| ACTGAAATACTGCATAGGGA+AGG | + | chr3_4:70452688-70452707 | Msa0518610:CDS | 40.0% | |
| !! | ATCTCACTCTTTTTGGAGGA+TGG | + | chr3_4:70452817-70452836 | Msa0518610:three_prime_UTR | 40.0% |
| ! | CTAGTAGATTTTCTGAGTGC+CGG | + | chr3_4:70453023-70453042 | Msa0518610:three_prime_UTR | 40.0% |
| ! | CTAGAGATTCGATGGTTTTC+CGG | - | chr3_4:70453045-70453064 | None:intergenic | 40.0% |
| GAAGTCTTCCAATGTTGCAA+GGG | - | chr3_4:70453083-70453102 | None:intergenic | 40.0% | |
| TGAAGTCTTCCAATGTTGCA+AGG | - | chr3_4:70453084-70453103 | None:intergenic | 40.0% | |
| ACTTGATTCAGAGGACACTA+TGG | + | chr3_4:70453105-70453124 | Msa0518610:three_prime_UTR | 40.0% | |
| ! | GGAAAAAGCCACTTCAGTTT+TGG | + | chr3_4:70453238-70453257 | Msa0518610:three_prime_UTR | 40.0% |
| !! | AAAGCCACTTCAGTTTTGGT+AGG | + | chr3_4:70453242-70453261 | Msa0518610:three_prime_UTR | 40.0% |
| AGAACCTACCAAAACTGAAG+TGG | - | chr3_4:70453249-70453268 | None:intergenic | 40.0% | |
| TTGGTAGGTTCTATCCTACA+AGG | + | chr3_4:70453257-70453276 | Msa0518610:three_prime_UTR | 40.0% | |
| ! | ATTTTTCCTTTTTGCCGGGA+AGG | + | chr3_4:70453436-70453455 | Msa0518610:three_prime_UTR | 40.0% |
| GTAGGGACCATTTGTGGATT+TGG | - | chr3_4:70449425-70449444 | None:intergenic | 45.0% | |
| GTTTACTCTCGAATTCAGGG+TGG | + | chr3_4:70449523-70449542 | Msa0518610:five_prime_UTR | 45.0% | |
| ATGTGGAGTGAAAGGGATGA+GGG | - | chr3_4:70449601-70449620 | None:intergenic | 45.0% | |
| TATGTGGAGTGAAAGGGATG+AGG | - | chr3_4:70449602-70449621 | None:intergenic | 45.0% | |
| TTGGGGTTATGTGAATTCCC+AGG | + | chr3_4:70449990-70450009 | Msa0518610:intron | 45.0% | |
| TGGGGTTATGTGAATTCCCA+GGG | + | chr3_4:70449991-70450010 | Msa0518610:intron | 45.0% | |
| !! | ATTCAATGTGTCGGTGCTGT+AGG | - | chr3_4:70450271-70450290 | None:intergenic | 45.0% |
| ATCAGTGTATGTGTCATGCC+TGG | + | chr3_4:70450313-70450332 | Msa0518610:intron | 45.0% | |
| ! | TGTCCGGTGGAGTATTTAAG+TGG | - | chr3_4:70450421-70450440 | None:intergenic | 45.0% |
| CGTCGAGTAGTATGACTATG+AGG | - | chr3_4:70450444-70450463 | None:intergenic | 45.0% | |
| TACTACTCGACGTCAGACTT+AGG | + | chr3_4:70450452-70450471 | Msa0518610:intron | 45.0% | |
| ! | ATGTTTTCTCCGTGCTGTAC+AGG | + | chr3_4:70450690-70450709 | Msa0518610:intron | 45.0% |
| TGGCATATACCTGTACAGCA+CGG | - | chr3_4:70450702-70450721 | None:intergenic | 45.0% | |
| TGGAGATGGAACAGTTTGAG+TGG | - | chr3_4:70450722-70450741 | None:intergenic | 45.0% | |
| ! | ACGGAAATGACTTCTGGAGA+TGG | - | chr3_4:70450736-70450755 | None:intergenic | 45.0% |
| ATCTCCAGAAGTCATTTCCG+TGG | + | chr3_4:70450735-70450754 | Msa0518610:CDS | 45.0% | |
| ACTAATGTCTAAGAGAGCGG+CGG | - | chr3_4:70450815-70450834 | None:intergenic | 45.0% | |
| GGCACTAATGTCTAAGAGAG+CGG | - | chr3_4:70450818-70450837 | None:intergenic | 45.0% | |
| GACAGCTTCTTCAGCAACTT+TGG | - | chr3_4:70450866-70450885 | None:intergenic | 45.0% | |
| TTTATCCAGTGAGAAAGCCG+AGG | + | chr3_4:70450939-70450958 | Msa0518610:intron | 45.0% | |
| AAAGGTCGATACCAATGCCT+CGG | - | chr3_4:70450959-70450978 | None:intergenic | 45.0% | |
| GTGGAAAGTTACTGAGCTTG+AGG | + | chr3_4:70451346-70451365 | Msa0518610:CDS | 45.0% | |
| ! | TGAACTACAATCTCGACTCG+AGG | + | chr3_4:70451469-70451488 | Msa0518610:CDS | 45.0% |
| GGTGCTCAAATCCCATTCAA+TGG | - | chr3_4:70451510-70451529 | None:intergenic | 45.0% | |
| GCTTTCTCTTTCTGCAGCTT+GGG | - | chr3_4:70451531-70451550 | None:intergenic | 45.0% | |
| TGCTTTCTCTTTCTGCAGCT+TGG | - | chr3_4:70451532-70451551 | None:intergenic | 45.0% | |
| !! | GCATGTCAGATAATGGAGAG+AGG | + | chr3_4:70451696-70451715 | Msa0518610:CDS | 45.0% |
| TAATGGAGAGAGGCTATTGG+TGG | + | chr3_4:70451706-70451725 | Msa0518610:CDS | 45.0% | |
| ATATGCGTAAATTCGGAGGC+AGG | + | chr3_4:70451738-70451757 | Msa0518610:CDS | 45.0% | |
| TATGCGTAAATTCGGAGGCA+GGG | + | chr3_4:70451739-70451758 | Msa0518610:CDS | 45.0% | |
| GGCCATGAGTCATAATGCTT+TGG | - | chr3_4:70451782-70451801 | None:intergenic | 45.0% | |
| ACCACTGCACAAAACCGTAT+TGG | + | chr3_4:70451845-70451864 | Msa0518610:CDS | 45.0% | |
| GCATCAGACCAACCAAATGT+TGG | + | chr3_4:70451938-70451957 | Msa0518610:CDS | 45.0% | |
| AGACACAGTGTATGCTGAAG+TGG | + | chr3_4:70451970-70451989 | Msa0518610:CDS | 45.0% | |
| ! | GTATGCTGAAGTGGAAGCAT+TGG | + | chr3_4:70451979-70451998 | Msa0518610:CDS | 45.0% |
| GGAGAAGAAGCTAGCGAAAA+TGG | + | chr3_4:70452021-70452040 | Msa0518610:CDS | 45.0% | |
| GAAGAAGCTAGCGAAAATGG+AGG | + | chr3_4:70452024-70452043 | Msa0518610:CDS | 45.0% | |
| !! | GTAATACCTCGAGCTGCTTT+TGG | - | chr3_4:70452087-70452106 | None:intergenic | 45.0% |
| ! | AAGCAGCTCGAGGTATTACA+AGG | + | chr3_4:70452088-70452107 | Msa0518610:CDS | 45.0% |
| GGAAGAGATTGACAAAGAGC+GGG | + | chr3_4:70452297-70452316 | Msa0518610:CDS | 45.0% | |
| TGCAGATAAACTCGAGCTAG+AGG | + | chr3_4:70452327-70452346 | Msa0518610:CDS | 45.0% | |
| AGATAAACTCGAGCTAGAGG+TGG | + | chr3_4:70452330-70452349 | Msa0518610:CDS | 45.0% | |
| ! | GCTCAAGGTATCACAAAGTC+GGG | + | chr3_4:70452375-70452394 | Msa0518610:CDS | 45.0% |
| GGTATCACAAAGTCGGGTAA+AGG | + | chr3_4:70452381-70452400 | Msa0518610:CDS | 45.0% | |
| ACAAAGTCGGGTAAAGGAAG+CGG | + | chr3_4:70452387-70452406 | Msa0518610:CDS | 45.0% | |
| GGAAGAGATTGAGAAAGAGC+GGG | + | chr3_4:70452579-70452598 | Msa0518610:CDS | 45.0% | |
| !! | CTGCATAGGGAAGGTATTGA+TGG | + | chr3_4:70452697-70452716 | Msa0518610:CDS | 45.0% |
| TGGCGAGTTAATGTTCAAGC+AGG | + | chr3_4:70452717-70452736 | Msa0518610:CDS | 45.0% | |
| GCATCATTTGATGCAGGAGA+AGG | + | chr3_4:70452985-70453004 | Msa0518610:three_prime_UTR | 45.0% | |
| CGGAAAACCATCGAATCTCT+AGG | + | chr3_4:70453043-70453062 | Msa0518610:three_prime_UTR | 45.0% | |
| GTTGAAGTCCCTTGCAACAT+TGG | + | chr3_4:70453072-70453091 | Msa0518610:three_prime_UTR | 45.0% | |
| TGTTCTGCTCAAGACCTTGT+AGG | - | chr3_4:70453274-70453293 | None:intergenic | 45.0% | |
| TACAAGGTCTTGAGCAGAAC+AGG | + | chr3_4:70453273-70453292 | Msa0518610:three_prime_UTR | 45.0% | |
| GCATGATTCAAACTCCTTCC+CGG | - | chr3_4:70453453-70453472 | None:intergenic | 45.0% | |
| !! | ATTAATATTTGATTATATTT+AGG | + | chr3_4:70451104-70451123 | Msa0518610:intron | 5.0% |
| TAGGAGGTAGGGACCATTTG+TGG | - | chr3_4:70449431-70449450 | None:intergenic | 50.0% | |
| TACTCTCGAATTCAGGGTGG+AGG | + | chr3_4:70449526-70449545 | Msa0518610:five_prime_UTR | 50.0% | |
| TGGAACGAAGGAGTTGGATG+TGG | + | chr3_4:70449784-70449803 | Msa0518610:CDS | 50.0% | |
| GAACAGCTAGCTACCTACCT+AGG | - | chr3_4:70449963-70449982 | None:intergenic | 50.0% | |
| ! | TTGAAGGCGTGTCTGATGTC+TGG | + | chr3_4:70450232-70450251 | Msa0518610:intron | 50.0% |
| GCTATGAAGCACAAACACGG+AGG | - | chr3_4:70450339-70450358 | None:intergenic | 50.0% | |
| ! | TATGACTATGAGGTGTCCGG+TGG | - | chr3_4:70450434-70450453 | None:intergenic | 50.0% |
| CTCTTCATTTGACGCAGCCA+CGG | - | chr3_4:70450755-70450774 | None:intergenic | 50.0% | |
| GTTGCTGAAGAAGCTGTCTC+AGG | + | chr3_4:70450868-70450887 | Msa0518610:CDS | 50.0% | |
| ! | CCACTCAAGCTCGTCTCTTT+TGG | - | chr3_4:70451330-70451349 | None:intergenic | 50.0% |
| CCAAAAGAGACGAGCTTGAG+TGG | + | chr3_4:70451327-70451346 | Msa0518610:CDS | 50.0% | |
| TGATCTTCTGCAGAGGCTTC+AGG | + | chr3_4:70451415-70451434 | Msa0518610:CDS | 50.0% | |
| GTGCCAGAGATTGAATGTCG+TGG | + | chr3_4:70451598-70451617 | Msa0518610:CDS | 50.0% | |
| GAGCCACGACATTCAATCTC+TGG | - | chr3_4:70451604-70451623 | None:intergenic | 50.0% | |
| CATTCTCTGTCAACGATCGC+AGG | + | chr3_4:70451630-70451649 | Msa0518610:CDS | 50.0% | |
| GGAGGCAGGGAGATAAATGA+AGG | + | chr3_4:70451752-70451771 | Msa0518610:CDS | 50.0% | |
| !! | GCCAATACGGTTTTGTGCAG+TGG | - | chr3_4:70451849-70451868 | None:intergenic | 50.0% |
| CAGCAAGCCTTTCCATTTCG+AGG | - | chr3_4:70451904-70451923 | None:intergenic | 50.0% | |
| !! | GGTTGGTCTGATGCAGTATC+TGG | - | chr3_4:70451932-70451951 | None:intergenic | 50.0% |
| AGACCAACCAAATGTTGGCC+AGG | + | chr3_4:70451943-70451962 | Msa0518610:CDS | 50.0% | |
| GACCAACCAAATGTTGGCCA+GGG | + | chr3_4:70451944-70451963 | Msa0518610:CDS | 50.0% | |
| TTCCCTGGCCAACATTTGGT+TGG | - | chr3_4:70451949-70451968 | None:intergenic | 50.0% | |
| TCTGTTCCCTGGCCAACATT+TGG | - | chr3_4:70451953-70451972 | None:intergenic | 50.0% | |
| CATACACTGTGTCTGTTCCC+TGG | - | chr3_4:70451964-70451983 | None:intergenic | 50.0% | |
| ! | AGCTCGAGGTATTACAAGGC+CGG | + | chr3_4:70452092-70452111 | Msa0518610:CDS | 50.0% |
| GGTATTACAAGGCCGGGTAA+AGG | + | chr3_4:70452099-70452118 | Msa0518610:CDS | 50.0% | |
| CCAACTCTGCTTCCTTTACC+CGG | - | chr3_4:70452114-70452133 | None:intergenic | 50.0% | |
| GGTAAAGGAAGCAGAGTTGG+AGG | + | chr3_4:70452114-70452133 | Msa0518610:CDS | 50.0% | |
| ACTGAGAGCTGCTCAAACTG+AGG | + | chr3_4:70452240-70452259 | Msa0518610:CDS | 50.0% | |
| CGAGTGCCAAAAACAGCTCA+AGG | + | chr3_4:70452360-70452379 | Msa0518610:CDS | 50.0% | |
| ACTGAGAGCTGCTCAAACTG+AGG | + | chr3_4:70452240-70452259 | Msa0518610:CDS | 50.0% | |
| GCAGGAGAAGGAACTAGCAT+TGG | + | chr3_4:70452997-70453016 | Msa0518610:three_prime_UTR | 50.0% | |
| CTGCTGTCCTAGAGATTCGA+TGG | - | chr3_4:70453053-70453072 | None:intergenic | 50.0% | |
| CAAACTCCTTCCCGGCAAAA+AGG | - | chr3_4:70453445-70453464 | None:intergenic | 50.0% | |
| ! | TCAGGGTGGAGGCGTGAAAT+TGG | + | chr3_4:70449537-70449556 | Msa0518610:five_prime_UTR | 55.0% |
| ! | CAGGGTGGAGGCGTGAAATT+GGG | + | chr3_4:70449538-70449557 | Msa0518610:five_prime_UTR | 55.0% |
| ! | AGGGTGGAGGCGTGAAATTG+GGG | + | chr3_4:70449539-70449558 | Msa0518610:five_prime_UTR | 55.0% |
| ATACAGGAAGGAGGGGTCCT+AGG | + | chr3_4:70449943-70449962 | Msa0518610:intron | 55.0% | |
| GCAGCCACGGAAATGACTTC+TGG | - | chr3_4:70450742-70450761 | None:intergenic | 55.0% | |
| CGTGGCTGCGTCAAATGAAG+AGG | + | chr3_4:70450753-70450772 | Msa0518610:CDS | 55.0% | |
| CAATGCCTCGGCTTTCTCAC+TGG | - | chr3_4:70450947-70450966 | None:intergenic | 55.0% | |
| CAGTGAGAAAGCCGAGGCAT+TGG | + | chr3_4:70450945-70450964 | Msa0518610:intron | 55.0% | |
| TCTGCAGAGGCTTCAGGATG+TGG | + | chr3_4:70451421-70451440 | Msa0518610:CDS | 55.0% | |
| AGAGGCTTCAGGATGTGGAG+AGG | + | chr3_4:70451426-70451445 | Msa0518610:CDS | 55.0% | |
| GAGGCTTCAGGATGTGGAGA+GGG | + | chr3_4:70451427-70451446 | Msa0518610:CDS | 55.0% | |
| ! | GCTCGAGGTATTACAAGGCC+GGG | + | chr3_4:70452093-70452112 | Msa0518610:CDS | 55.0% |
| CCGGGTAAAGGAAGCAGAGT+TGG | + | chr3_4:70452111-70452130 | Msa0518610:CDS | 55.0% | |
| GAGAGCTGCTCAAACTGAGG+CGG | + | chr3_4:70452243-70452262 | Msa0518610:CDS | 55.0% | |
| TCGGGTAAAGGAAGCGGAGT+TGG | + | chr3_4:70452393-70452412 | Msa0518610:CDS | 55.0% | |
| GGTAAAGGAAGCGGAGTTGG+AGG | + | chr3_4:70452396-70452415 | Msa0518610:CDS | 55.0% | |
| AACTGCTCACCGCCATCTTG+GGG | - | chr3_4:70453160-70453179 | None:intergenic | 55.0% | |
| CAACTGCTCACCGCCATCTT+GGG | - | chr3_4:70453161-70453180 | None:intergenic | 55.0% | |
| TCAACTGCTCACCGCCATCT+TGG | - | chr3_4:70453162-70453181 | None:intergenic | 55.0% | |
| AGGAAGGAGGGGTCCTAGGT+AGG | + | chr3_4:70449947-70449966 | Msa0518610:intron | 60.0% | |
| GAAGCACAAACACGGAGGCC+AGG | - | chr3_4:70450334-70450353 | None:intergenic | 60.0% | |
| CGAGTGCCAAAAGCAGCTCG+AGG | + | chr3_4:70452078-70452097 | Msa0518610:CDS | 60.0% | |
| ACAACCCCAGCTCCCCAAGA+TGG | + | chr3_4:70453145-70453164 | Msa0518610:three_prime_UTR | 60.0% | |
| ACCCCAGCTCCCCAAGATGG+CGG | + | chr3_4:70453148-70453167 | Msa0518610:three_prime_UTR | 65.0% | |
| ACCGCCATCTTGGGGAGCTG+GGG | - | chr3_4:70453152-70453171 | None:intergenic | 65.0% | |
| CACCGCCATCTTGGGGAGCT+GGG | - | chr3_4:70453153-70453172 | None:intergenic | 65.0% | |
| TCACCGCCATCTTGGGGAGC+TGG | - | chr3_4:70453154-70453173 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 70449421 | 70453575 | 70449421 | ID=Msa0518610;Name=Msa0518610 |
| chr3_4 | mRNA | 70449421 | 70453575 | 70449421 | ID=Msa0518610-mRNA-1;Parent=Msa0518610;Name=Msa0518610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=190|1|1|1|0.5|0.6|5|774|656 |
| chr3_4 | exon | 70449421 | 70449493 | 70449421 | ID=Msa0518610-mRNA-1:exon:19075;Parent=Msa0518610-mRNA-1 |
| chr3_4 | exon | 70449516 | 70449632 | 70449516 | ID=Msa0518610-mRNA-1:exon:19076;Parent=Msa0518610-mRNA-1 |
| chr3_4 | exon | 70449783 | 70449899 | 70449783 | ID=Msa0518610-mRNA-1:exon:19077;Parent=Msa0518610-mRNA-1 |
| chr3_4 | exon | 70450712 | 70450889 | 70450712 | ID=Msa0518610-mRNA-1:exon:19078;Parent=Msa0518610-mRNA-1 |
| chr3_4 | exon | 70451126 | 70453575 | 70451126 | ID=Msa0518610-mRNA-1:exon:19079;Parent=Msa0518610-mRNA-1 |
| chr3_4 | five_prime_UTR | 70449421 | 70449493 | 70449421 | ID=Msa0518610-mRNA-1:five_prime_utr;Parent=Msa0518610-mRNA-1 |
| chr3_4 | five_prime_UTR | 70449516 | 70449632 | 70449516 | ID=Msa0518610-mRNA-1:five_prime_utr;Parent=Msa0518610-mRNA-1 |
| chr3_4 | CDS | 70449783 | 70449899 | 70449783 | ID=Msa0518610-mRNA-1:cds;Parent=Msa0518610-mRNA-1 |
| chr3_4 | CDS | 70450712 | 70450889 | 70450712 | ID=Msa0518610-mRNA-1:cds;Parent=Msa0518610-mRNA-1 |
| chr3_4 | CDS | 70451126 | 70452801 | 70451126 | ID=Msa0518610-mRNA-1:cds;Parent=Msa0518610-mRNA-1 |
| chr3_4 | three_prime_UTR | 70452802 | 70453575 | 70452802 | ID=Msa0518610-mRNA-1:three_prime_utr;Parent=Msa0518610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
