Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690250 | XP_003607297.1 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.49e-40 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690250 | G7JPM7 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 7.14e-41 | 137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0690250 | 0.816826 | 4.527729e-52 | -8.615850e-47 |
| Msa0003470 | Msa0690250 | 0.809229 | 2.097465e-50 | -8.615850e-47 |
| Msa0030310 | Msa0690250 | 0.815832 | 7.553512e-52 | -8.615850e-47 |
| Msa0030380 | Msa0690250 | 0.843149 | 1.673808e-58 | -8.615850e-47 |
| Msa0032840 | Msa0690250 | -0.835211 | 1.915305e-56 | -8.615850e-47 |
| Msa0044710 | Msa0690250 | 0.806223 | 9.132244e-50 | -8.615850e-47 |
| Msa0050430 | Msa0690250 | 0.804224 | 2.393440e-49 | -8.615850e-47 |
| Msa0050580 | Msa0690250 | 0.803246 | 3.820348e-49 | -8.615850e-47 |
| Msa0072810 | Msa0690250 | 0.814590 | 1.425809e-51 | -8.615850e-47 |
| Msa0074320 | Msa0690250 | 0.802192 | 6.303631e-49 | -8.615850e-47 |
| Msa0079250 | Msa0690250 | 0.813868 | 2.058419e-51 | -8.615850e-47 |
| Msa0085360 | Msa0690250 | -0.809357 | 1.969635e-50 | -8.615850e-47 |
| Msa0092710 | Msa0690250 | 0.810460 | 1.140218e-50 | -8.615850e-47 |
| Msa0095380 | Msa0690250 | 0.849382 | 3.351330e-60 | -8.615850e-47 |
| Msa0103000 | Msa0690250 | 0.815425 | 9.307997e-52 | -8.615850e-47 |
| Msa0104290 | Msa0690250 | 0.815496 | 8.973176e-52 | -8.615850e-47 |
| Msa0113160 | Msa0690250 | 0.807985 | 3.867138e-50 | -8.615850e-47 |
| Msa0114540 | Msa0690250 | -0.808856 | 2.521571e-50 | -8.615850e-47 |
| Msa0607200 | Msa0690250 | 0.828645 | 8.012204e-55 | -8.615850e-47 |
| Msa0607510 | Msa0690250 | 0.802517 | 5.402699e-49 | -8.615850e-47 |
| Msa0618010 | Msa0690250 | 0.862068 | 6.583973e-64 | -8.615850e-47 |
| Msa0627910 | Msa0690250 | 0.835603 | 1.524545e-56 | -8.615850e-47 |
| Msa0642650 | Msa0690250 | 0.824783 | 6.695140e-54 | -8.615850e-47 |
| Msa0647380 | Msa0690250 | 0.839771 | 1.297796e-57 | -8.615850e-47 |
| Msa0669220 | Msa0690250 | 0.802334 | 5.892977e-49 | -8.615850e-47 |
| Msa0669850 | Msa0690250 | 0.862861 | 3.754555e-64 | -8.615850e-47 |
| Msa0670270 | Msa0690250 | 0.804422 | 2.176860e-49 | -8.615850e-47 |
| Msa0677290 | Msa0690250 | 0.807972 | 3.893291e-50 | -8.615850e-47 |
| Msa0680240 | Msa0690250 | 0.809433 | 1.897136e-50 | -8.615850e-47 |
| Msa0690250 | Msa0692080 | 0.819818 | 9.513254e-53 | -8.615850e-47 |
| Msa0690250 | Msa0696620 | 0.810723 | 1.000209e-50 | -8.615850e-47 |
| Msa0690250 | Msa0712310 | 0.828634 | 8.059658e-55 | -8.615850e-47 |
| Msa0690250 | Msa0718740 | 0.806729 | 7.142530e-50 | -8.615850e-47 |
| Msa0690250 | Msa0725920 | 0.811818 | 5.787299e-51 | -8.615850e-47 |
| Msa0690250 | Msa0734660 | 0.837892 | 3.973844e-57 | -8.615850e-47 |
| Msa0690250 | Msa0743260 | 0.802736 | 4.870717e-49 | -8.615850e-47 |
| Msa0690250 | Msa0755340 | 0.824413 | 8.181768e-54 | -8.615850e-47 |
| Msa0690250 | Msa0776220 | 0.847350 | 1.222347e-59 | -8.615850e-47 |
| Msa0690250 | Msa0787750 | 0.813215 | 2.865715e-51 | -8.615850e-47 |
| Msa0690250 | Msa0790610 | 0.806098 | 9.700882e-50 | -8.615850e-47 |
| Msa0690250 | Msa0795010 | 0.805991 | 1.021807e-49 | -8.615850e-47 |
| Msa0690250 | Msa0795030 | 0.817373 | 3.409763e-52 | -8.615850e-47 |
| Msa0690250 | Msa0797120 | 0.811809 | 5.814364e-51 | -8.615850e-47 |
| Msa0690250 | Msa0805500 | 0.800917 | 1.150790e-48 | -8.615850e-47 |
| Msa0690250 | Msa0806920 | 0.814483 | 1.505888e-51 | -8.615850e-47 |
| Msa0690250 | Msa0813670 | 0.823331 | 1.467578e-53 | -8.615850e-47 |
| Msa0690250 | Msa0813720 | 0.843920 | 1.041049e-58 | -8.615850e-47 |
| Msa0690250 | Msa0830990 | 0.829633 | 4.616097e-55 | -8.615850e-47 |
| Msa0690250 | Msa0831870 | 0.805624 | 1.220350e-49 | -8.615850e-47 |
| Msa0690250 | Msa0846030 | 0.834625 | 2.690169e-56 | -8.615850e-47 |
| Msa0690250 | Msa0852730 | 0.821492 | 3.922949e-53 | -8.615850e-47 |
| Msa0690250 | Msa0854120 | 0.836253 | 1.043101e-56 | -8.615850e-47 |
| Msa0690250 | Msa0863450 | 0.805679 | 1.187942e-49 | -8.615850e-47 |
| Msa0690250 | Msa0871890 | 0.809499 | 1.836141e-50 | -8.615850e-47 |
| Msa0690250 | Msa0874500 | 0.852193 | 5.422099e-61 | -8.615850e-47 |
| Msa0690250 | Msa0874570 | 0.825514 | 4.496262e-54 | -8.615850e-47 |
| Msa0690250 | Msa0890250 | 0.817565 | 3.088060e-52 | -8.615850e-47 |
| Msa0690250 | Msa0900630 | 0.825391 | 4.809450e-54 | -8.615850e-47 |
| Msa0690250 | Msa0903330 | 0.828649 | 7.995665e-55 | -8.615850e-47 |
| Msa0690250 | Msa0905260 | 0.804603 | 1.995747e-49 | -8.615850e-47 |
| Msa0690250 | Msa0909000 | -0.803286 | 3.747789e-49 | -8.615850e-47 |
| Msa0690250 | Msa0922540 | 0.808047 | 3.752322e-50 | -8.615850e-47 |
| Msa0690250 | Msa0926460 | 0.818599 | 1.802151e-52 | -8.615850e-47 |
| Msa0690250 | Msa0965860 | 0.816129 | 6.484413e-52 | -8.615850e-47 |
| Msa0690250 | Msa0974530 | 0.809100 | 2.235803e-50 | -8.615850e-47 |
| Msa0690250 | Msa0974810 | 0.808516 | 2.980885e-50 | -8.615850e-47 |
| Msa0690250 | Msa1004900 | -0.800448 | 1.434613e-48 | -8.615850e-47 |
| Msa0690250 | Msa1015060 | 0.813528 | 2.445041e-51 | -8.615850e-47 |
| Msa0690250 | Msa1018790 | 0.812990 | 3.209469e-51 | -8.615850e-47 |
| Msa0690250 | Msa1026760 | 0.803828 | 2.893545e-49 | -8.615850e-47 |
| Msa0690250 | Msa1026790 | 0.802377 | 5.775921e-49 | -8.615850e-47 |
| Msa0690250 | Msa1047400 | 0.820539 | 6.503503e-53 | -8.615850e-47 |
| Msa0690250 | Msa1048330 | 0.817871 | 2.633943e-52 | -8.615850e-47 |
| Msa0690250 | Msa1054240 | 0.807486 | 4.937922e-50 | -8.615850e-47 |
| Msa0690250 | Msa1069660 | -0.830317 | 3.142837e-55 | -8.615850e-47 |
| Msa0690250 | Msa1072460 | -0.804996 | 1.651640e-49 | -8.615850e-47 |
| Msa0690250 | Msa1082700 | 0.828969 | 6.690375e-55 | -8.615850e-47 |
| Msa0690250 | Msa1084470 | 0.806667 | 7.361223e-50 | -8.615850e-47 |
| Msa0690250 | Msa1092820 | 0.802364 | 5.811574e-49 | -8.615850e-47 |
| Msa0690250 | Msa1094420 | 0.809030 | 2.313965e-50 | -8.615850e-47 |
| Msa0690250 | Msa1109570 | 0.828285 | 9.788318e-55 | -8.615850e-47 |
| Msa0690250 | Msa1126120 | -0.839980 | 1.144909e-57 | -8.615850e-47 |
| Msa0690250 | Msa1126770 | 0.801297 | 9.624652e-49 | -8.615850e-47 |
| Msa0690250 | Msa1134110 | 0.819064 | 1.412724e-52 | -8.615850e-47 |
| Msa0690250 | Msa1135690 | 0.825447 | 4.664840e-54 | -8.615850e-47 |
| Msa0690250 | Msa1166010 | 0.829976 | 3.808652e-55 | -8.615850e-47 |
| Msa0690250 | Msa1166860 | 0.803544 | 3.313987e-49 | -8.615850e-47 |
| Msa0690250 | Msa1166870 | 0.802817 | 4.686273e-49 | -8.615850e-47 |
| Msa0690250 | Msa1174010 | 0.821567 | 3.770302e-53 | -8.615850e-47 |
| Msa0690250 | Msa1183660 | 0.802232 | 6.185993e-49 | -8.615850e-47 |
| Msa0690250 | Msa1193950 | -0.803218 | 3.872215e-49 | -8.615850e-47 |
| Msa0690250 | Msa1223840 | 0.825054 | 5.776529e-54 | -8.615850e-47 |
| Msa0690250 | Msa1224670 | 0.844828 | 5.936784e-59 | -8.615850e-47 |
| Msa0690250 | Msa1226620 | 0.802701 | 4.951723e-49 | -8.615850e-47 |
| Msa0690250 | Msa1237030 | 0.827979 | 1.159882e-54 | -8.615850e-47 |
| Msa0690250 | Msa1246530 | -0.818525 | 1.872826e-52 | -8.615850e-47 |
| Msa0690250 | Msa1249870 | 0.801608 | 8.311195e-49 | -8.615850e-47 |
| Msa0690250 | Msa1263030 | 0.804654 | 1.947557e-49 | -8.615850e-47 |
| Msa0690250 | Msa1269580 | -0.820856 | 5.499236e-53 | -8.615850e-47 |
| Msa0690250 | Msa1284520 | 0.816729 | 4.758894e-52 | -8.615850e-47 |
| Msa0690250 | Msa1324000 | 0.816303 | 5.927636e-52 | -8.615850e-47 |
| Msa0690250 | Msa1335940 | 0.828275 | 9.844755e-55 | -8.615850e-47 |
| Msa0690250 | Msa1362510 | 0.808616 | 2.837421e-50 | -8.615850e-47 |
| Msa0690250 | Msa1363330 | 0.812503 | 4.103698e-51 | -8.615850e-47 |
| Msa0690250 | Msa1373510 | 0.832390 | 9.715138e-56 | -8.615850e-47 |
| Msa0690250 | Msa1374440 | 0.821071 | 4.906315e-53 | -8.615850e-47 |
| Msa0690250 | Msa1379760 | 0.810041 | 1.404095e-50 | -8.615850e-47 |
| Msa0690250 | Msa1382310 | 0.850505 | 1.626225e-60 | -8.615850e-47 |
| Msa0690250 | Msa1382410 | 0.819046 | 1.426254e-52 | -8.615850e-47 |
| Msa0690250 | Msa1386600 | 0.811888 | 5.587533e-51 | -8.615850e-47 |
| Msa0690250 | Msa1390310 | 0.835533 | 1.587704e-56 | -8.615850e-47 |
| Msa0690250 | Msa1397050 | 0.822860 | 1.889187e-53 | -8.615850e-47 |
| Msa0690250 | Msa1403930 | -0.807650 | 4.557458e-50 | -8.615850e-47 |
| Msa0690250 | Msa1404190 | 0.800042 | 1.735315e-48 | -8.615850e-47 |
| Msa0690250 | Msa1406040 | 0.800412 | 1.459097e-48 | -8.615850e-47 |
| Msa0690250 | Msa1422270 | 0.827986 | 1.155171e-54 | -8.615850e-47 |
| Msa0690250 | Msa1429360 | -0.812250 | 4.659043e-51 | -8.615850e-47 |
| Msa0690250 | Msa1432640 | 0.816690 | 4.856381e-52 | -8.615850e-47 |
| Msa0690250 | Msa1438640 | 0.810829 | 9.490233e-51 | -8.615850e-47 |
| Msa0690250 | Msa1442850 | 0.811967 | 5.371118e-51 | -8.615850e-47 |
| Msa0690250 | Msa1449880 | 0.821709 | 3.495708e-53 | -8.615850e-47 |
| Msa0690250 | Msa1450280 | 0.803238 | 3.834672e-49 | -8.615850e-47 |
| Msa0690250 | Msa1452470 | 0.800778 | 1.228560e-48 | -8.615850e-47 |
| Msa0690250 | Msa1453620 | 0.840169 | 1.022164e-57 | -8.615850e-47 |
| Msa0690250 | Msa1455660 | 0.802870 | 4.569539e-49 | -8.615850e-47 |
| Msa0690250 | Msa1456650 | 0.805339 | 1.400267e-49 | -8.615850e-47 |
| Msa0690250 | Msa1460470 | 0.806151 | 9.452785e-50 | -8.615850e-47 |
| Msa0690250 | Msa1461490 | 0.807043 | 6.127923e-50 | -8.615850e-47 |
| Msa0126900 | Msa0690250 | 0.804716 | 1.890164e-49 | -8.615850e-47 |
| Msa0141830 | Msa0690250 | 0.814448 | 1.532490e-51 | -8.615850e-47 |
| Msa0143080 | Msa0690250 | 0.832106 | 1.141908e-55 | -8.615850e-47 |
| Msa0145950 | Msa0690250 | 0.818809 | 1.614407e-52 | -8.615850e-47 |
| Msa0148120 | Msa0690250 | 0.801815 | 7.535483e-49 | -8.615850e-47 |
| Msa0162770 | Msa0690250 | -0.804202 | 2.419511e-49 | -8.615850e-47 |
| Msa0165950 | Msa0690250 | 0.801435 | 9.014715e-49 | -8.615850e-47 |
| Msa0167480 | Msa0690250 | 0.809126 | 2.207490e-50 | -8.615850e-47 |
| Msa0168100 | Msa0690250 | 0.800821 | 1.203714e-48 | -8.615850e-47 |
| Msa0168640 | Msa0690250 | -0.835835 | 1.331135e-56 | -8.615850e-47 |
| Msa0172350 | Msa0690250 | 0.839040 | 2.010137e-57 | -8.615850e-47 |
| Msa0172960 | Msa0690250 | -0.800613 | 1.327441e-48 | -8.615850e-47 |
| Msa0173740 | Msa0690250 | 0.838058 | 3.603092e-57 | -8.615850e-47 |
| Msa0173820 | Msa0690250 | 0.833666 | 4.677916e-56 | -8.615850e-47 |
| Msa0173830 | Msa0690250 | 0.807173 | 5.753087e-50 | -8.615850e-47 |
| Msa0182640 | Msa0690250 | 0.800754 | 1.242709e-48 | -8.615850e-47 |
| Msa0183620 | Msa0690250 | 0.807899 | 4.034360e-50 | -8.615850e-47 |
| Msa0188890 | Msa0690250 | 0.814969 | 1.174904e-51 | -8.615850e-47 |
| Msa0194970 | Msa0690250 | 0.835426 | 1.689802e-56 | -8.615850e-47 |
| Msa0199690 | Msa0690250 | 0.818535 | 1.863715e-52 | -8.615850e-47 |
| Msa0224730 | Msa0690250 | 0.805276 | 1.443243e-49 | -8.615850e-47 |
| Msa0227400 | Msa0690250 | 0.801116 | 1.047951e-48 | -8.615850e-47 |
| Msa0230550 | Msa0690250 | -0.832375 | 9.796517e-56 | -8.615850e-47 |
| Msa0231380 | Msa0690250 | 0.807235 | 5.580333e-50 | -8.615850e-47 |
| Msa0236270 | Msa0690250 | 0.811951 | 5.413931e-51 | -8.615850e-47 |
| Msa0236980 | Msa0690250 | 0.844816 | 5.980541e-59 | -8.615850e-47 |
| Msa0238070 | Msa0690250 | -0.801079 | 1.066353e-48 | -8.615850e-47 |
| Msa0369220 | Msa0690250 | 0.815307 | 9.887381e-52 | -8.615850e-47 |
| Msa0376040 | Msa0690250 | 0.804656 | 1.945679e-49 | -8.615850e-47 |
| Msa0376510 | Msa0690250 | 0.812078 | 5.080788e-51 | -8.615850e-47 |
| Msa0377530 | Msa0690250 | 0.806924 | 6.494955e-50 | -8.615850e-47 |
| Msa0377900 | Msa0690250 | -0.802222 | 6.216497e-49 | -8.615850e-47 |
| Msa0378080 | Msa0690250 | 0.806470 | 8.100072e-50 | -8.615850e-47 |
| Msa0380040 | Msa0690250 | 0.845324 | 4.359287e-59 | -8.615850e-47 |
| Msa0392070 | Msa0690250 | 0.802702 | 4.948503e-49 | -8.615850e-47 |
| Msa0392940 | Msa0690250 | 0.822853 | 1.897026e-53 | -8.615850e-47 |
| Msa0402330 | Msa0690250 | 0.813234 | 2.837967e-51 | -8.615850e-47 |
| Msa0414950 | Msa0690250 | -0.824304 | 8.679148e-54 | -8.615850e-47 |
| Msa0416400 | Msa0690250 | 0.808827 | 2.557268e-50 | -8.615850e-47 |
| Msa0421780 | Msa0690250 | -0.809110 | 2.224509e-50 | -8.615850e-47 |
| Msa0425050 | Msa0690250 | 0.801454 | 8.937004e-49 | -8.615850e-47 |
| Msa0429290 | Msa0690250 | 0.854697 | 1.036005e-61 | -8.615850e-47 |
| Msa0436280 | Msa0690250 | -0.816007 | 6.904445e-52 | -8.615850e-47 |
| Msa0440130 | Msa0690250 | -0.800235 | 1.585115e-48 | -8.615850e-47 |
| Msa0441800 | Msa0690250 | 0.822158 | 2.750639e-53 | -8.615850e-47 |
| Msa0465790 | Msa0690250 | 0.807824 | 4.184409e-50 | -8.615850e-47 |
| Msa0467960 | Msa0690250 | -0.815776 | 7.771624e-52 | -8.615850e-47 |
| Msa0469910 | Msa0690250 | -0.818149 | 2.278840e-52 | -8.615850e-47 |
| Msa0470610 | Msa0690250 | 0.816164 | 6.369312e-52 | -8.615850e-47 |
| Msa0473830 | Msa0690250 | -0.801297 | 9.622853e-49 | -8.615850e-47 |
| Msa0475580 | Msa0690250 | 0.845807 | 3.225298e-59 | -8.615850e-47 |
| Msa0480320 | Msa0690250 | 0.802407 | 5.693353e-49 | -8.615850e-47 |
| Msa0242520 | Msa0690250 | 0.802981 | 4.334835e-49 | -8.615850e-47 |
| Msa0242680 | Msa0690250 | 0.848551 | 5.701839e-60 | -8.615850e-47 |
| Msa0244270 | Msa0690250 | 0.819013 | 1.451540e-52 | -8.615850e-47 |
| Msa0267760 | Msa0690250 | 0.840894 | 6.605080e-58 | -8.615850e-47 |
| Msa0270660 | Msa0690250 | 0.805433 | 1.338118e-49 | -8.615850e-47 |
| Msa0275030 | Msa0690250 | 0.810422 | 1.161943e-50 | -8.615850e-47 |
| Msa0275680 | Msa0690250 | -0.810996 | 8.731995e-51 | -8.615850e-47 |
| Msa0280430 | Msa0690250 | 0.813996 | 1.928705e-51 | -8.615850e-47 |
| Msa0280490 | Msa0690250 | 0.826511 | 2.606449e-54 | -8.615850e-47 |
| Msa0280900 | Msa0690250 | 0.815638 | 8.345485e-52 | -8.615850e-47 |
| Msa0284960 | Msa0690250 | 0.805543 | 1.268764e-49 | -8.615850e-47 |
| Msa0302650 | Msa0690250 | 0.807137 | 5.854215e-50 | -8.615850e-47 |
| Msa0320100 | Msa0690250 | 0.810073 | 1.381684e-50 | -8.615850e-47 |
| Msa0328210 | Msa0690250 | 0.853496 | 2.299748e-61 | -8.615850e-47 |
| Msa0355270 | Msa0690250 | 0.808606 | 2.851390e-50 | -8.615850e-47 |
| Msa0358170 | Msa0690250 | 0.808474 | 3.042101e-50 | -8.615850e-47 |
| Msa0484690 | Msa0690250 | 0.823539 | 1.311461e-53 | -8.615850e-47 |
| Msa0490300 | Msa0690250 | 0.815090 | 1.104831e-51 | -8.615850e-47 |
| Msa0508590 | Msa0690250 | 0.839561 | 1.471888e-57 | -8.615850e-47 |
| Msa0508630 | Msa0690250 | 0.829540 | 4.861317e-55 | -8.615850e-47 |
| Msa0508870 | Msa0690250 | 0.809470 | 1.862777e-50 | -8.615850e-47 |
| Msa0509390 | Msa0690250 | 0.823368 | 1.438462e-53 | -8.615850e-47 |
| Msa0516040 | Msa0690250 | 0.803058 | 4.177301e-49 | -8.615850e-47 |
| Msa0517490 | Msa0690250 | 0.808690 | 2.736046e-50 | -8.615850e-47 |
| Msa0517840 | Msa0690250 | 0.814872 | 1.234770e-51 | -8.615850e-47 |
| Msa0518070 | Msa0690250 | -0.800224 | 1.593327e-48 | -8.615850e-47 |
| Msa0519220 | Msa0690250 | 0.851331 | 9.512740e-61 | -8.615850e-47 |
| Msa0520320 | Msa0690250 | 0.811701 | 6.138032e-51 | -8.615850e-47 |
| Msa0525340 | Msa0690250 | 0.824907 | 6.259320e-54 | -8.615850e-47 |
| Msa0526540 | Msa0690250 | 0.814948 | 1.187824e-51 | -8.615850e-47 |
| Msa0526700 | Msa0690250 | 0.802375 | 5.779476e-49 | -8.615850e-47 |
| Msa0526710 | Msa0690250 | 0.837314 | 5.592514e-57 | -8.615850e-47 |
| Msa0527600 | Msa0690250 | 0.806608 | 7.572118e-50 | -8.615850e-47 |
| Msa0532840 | Msa0690250 | 0.811774 | 5.918366e-51 | -8.615850e-47 |
| Msa0533010 | Msa0690250 | 0.817455 | 3.268528e-52 | -8.615850e-47 |
| Msa0535030 | Msa0690250 | 0.831012 | 2.124672e-55 | -8.615850e-47 |
| Msa0535060 | Msa0690250 | 0.827572 | 1.453046e-54 | -8.615850e-47 |
| Msa0546380 | Msa0690250 | 0.801752 | 7.762021e-49 | -8.615850e-47 |
| Msa0553150 | Msa0690250 | 0.869420 | 3.137159e-66 | -8.615850e-47 |
| Msa0564930 | Msa0690250 | 0.826632 | 2.438267e-54 | -8.615850e-47 |
| Msa0571920 | Msa0690250 | 0.800293 | 1.542800e-48 | -8.615850e-47 |
| Msa0576940 | Msa0690250 | 0.821322 | 4.293835e-53 | -8.615850e-47 |
| Msa0579290 | Msa0690250 | 0.804887 | 1.740499e-49 | -8.615850e-47 |
| Msa0590680 | Msa0690250 | 0.835755 | 1.395332e-56 | -8.615850e-47 |
| Msa0591060 | Msa0690250 | 0.858824 | 6.318558e-63 | -8.615850e-47 |
| Msa0591770 | Msa0690250 | 0.857061 | 2.109311e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690250 | MtrunA17_Chr4g0038821 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.37e-44 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690250 | AT3G22210.1 | 62.500 | 64 | 23 | 1 | 5 | 68 | 6 | 68 | 1.55e-20 | 77.0 |
Find 13 sgRNAs with CRISPR-Local
Find 14 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTCGCTCTTCCAGTTT+TGG | 0.231911 | 4_4:+57917228 | Msa0690250:CDS |
| GTCTTCTAGCTCGCCTCTCT+CGG | 0.346161 | 4_4:-57917458 | None:intergenic |
| GACAGAAATCACTTCAAGAT+TGG | 0.349085 | 4_4:+57917388 | Msa0690250:intron |
| GCTGCAACAATGCCCAAAAC+TGG | 0.365881 | 4_4:-57917241 | None:intergenic |
| AGCTCGCCTCTCTCGGGAGC+TGG | 0.374844 | 4_4:-57917451 | None:intergenic |
| CTCTCTCGGGAGCTGGATGT+TGG | 0.452110 | 4_4:-57917444 | None:intergenic |
| ACAGAAATCACTTCAAGATT+GGG | 0.482353 | 4_4:+57917389 | Msa0690250:intron |
| ATTGAAACTCACTGCATAGA+AGG | 0.485260 | 4_4:-57917275 | None:intergenic |
| TCTTCTAGCTCGCCTCTCTC+GGG | 0.500761 | 4_4:-57917457 | None:intergenic |
| GATGATTCTGAATCAGAGAA+TGG | 0.538128 | 4_4:+57917411 | Msa0690250:CDS |
| CAACATCCAGCTCCCGAGAG+AGG | 0.612999 | 4_4:+57917445 | Msa0690250:CDS |
| GAGTTTCAATGAGATTAGAG+AGG | 0.641117 | 4_4:+57917288 | Msa0690250:CDS |
| GATTCTGAATCAGAGAATGG+AGG | 0.645594 | 4_4:+57917414 | Msa0690250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ACAGAAATCACTTCAAGATT+GGG | + | chr4_4:57917389-57917408 | Msa0690250:intron | 30.0% | |
| ATTGAAACTCACTGCATAGA+AGG | - | chr4_4:57917278-57917297 | None:intergenic | 35.0% | |
| GAGTTTCAATGAGATTAGAG+AGG | + | chr4_4:57917288-57917307 | Msa0690250:CDS | 35.0% | |
| GACAGAAATCACTTCAAGAT+TGG | + | chr4_4:57917388-57917407 | Msa0690250:intron | 35.0% | |
| GATGATTCTGAATCAGAGAA+TGG | + | chr4_4:57917411-57917430 | Msa0690250:CDS | 35.0% | |
| ! | CAATTCGCTCTTCCAGTTTT+GGG | + | chr4_4:57917229-57917248 | Msa0690250:CDS | 40.0% |
| GATTCTGAATCAGAGAATGG+AGG | + | chr4_4:57917414-57917433 | Msa0690250:CDS | 40.0% | |
| ! | GCAATTCGCTCTTCCAGTTT+TGG | + | chr4_4:57917228-57917247 | Msa0690250:CDS | 45.0% |
| GCTGCAACAATGCCCAAAAC+TGG | - | chr4_4:57917244-57917263 | None:intergenic | 50.0% | |
| !! | TCTTCTAGCTCGCCTCTCTC+GGG | - | chr4_4:57917460-57917479 | None:intergenic | 55.0% |
| !! | GTCTTCTAGCTCGCCTCTCT+CGG | - | chr4_4:57917461-57917480 | None:intergenic | 55.0% |
| CTCTCTCGGGAGCTGGATGT+TGG | - | chr4_4:57917447-57917466 | None:intergenic | 60.0% | |
| CAACATCCAGCTCCCGAGAG+AGG | + | chr4_4:57917445-57917464 | Msa0690250:CDS | 60.0% | |
| AGCTCGCCTCTCTCGGGAGC+TGG | - | chr4_4:57917454-57917473 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 57917217 | 57917506 | 57917217 | ID=Msa0690250;Name=Msa0690250 |
| chr4_4 | mRNA | 57917217 | 57917506 | 57917217 | ID=Msa0690250-mRNA-1;Parent=Msa0690250;Name=Msa0690250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|68 |
| chr4_4 | exon | 57917217 | 57917309 | 57917217 | ID=Msa0690250-mRNA-1:exon:15481;Parent=Msa0690250-mRNA-1 |
| chr4_4 | exon | 57917393 | 57917506 | 57917393 | ID=Msa0690250-mRNA-1:exon:15482;Parent=Msa0690250-mRNA-1 |
| chr4_4 | CDS | 57917217 | 57917309 | 57917217 | ID=Msa0690250-mRNA-1:cds;Parent=Msa0690250-mRNA-1 |
| chr4_4 | CDS | 57917393 | 57917506 | 57917393 | ID=Msa0690250-mRNA-1:cds;Parent=Msa0690250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
