Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556100 | XP_003607904.1 | 94.570 | 221 | 10 | 1 | 1 | 219 | 1 | 221 | 2.23e-150 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556100 | sp|Q3T168|CYBP_BOVIN | 34.211 | 228 | 122 | 5 | 3 | 211 | 6 | 224 | 2.95e-28 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556100 | Q2MGR2 | 94.570 | 221 | 10 | 1 | 1 | 219 | 1 | 221 | 1.06e-150 | 427 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0556100 | 0.801415 | 9.100090e-49 | -8.615850e-47 |
| Msa0006110 | Msa0556100 | 0.831124 | 1.993935e-55 | -8.615850e-47 |
| Msa0011660 | Msa0556100 | -0.816280 | 5.997810e-52 | -8.615850e-47 |
| Msa0020410 | Msa0556100 | 0.824362 | 8.410425e-54 | -8.615850e-47 |
| Msa0022550 | Msa0556100 | 0.829331 | 5.465346e-55 | -8.615850e-47 |
| Msa0025740 | Msa0556100 | 0.801098 | 1.057065e-48 | -8.615850e-47 |
| Msa0031180 | Msa0556100 | 0.803692 | 3.087084e-49 | -8.615850e-47 |
| Msa0031340 | Msa0556100 | 0.803160 | 3.980596e-49 | -8.615850e-47 |
| Msa0037880 | Msa0556100 | 0.816198 | 6.256532e-52 | -8.615850e-47 |
| Msa0041960 | Msa0556100 | 0.816936 | 4.275761e-52 | -8.615850e-47 |
| Msa0043980 | Msa0556100 | 0.818497 | 1.900933e-52 | -8.615850e-47 |
| Msa0045490 | Msa0556100 | 0.808323 | 3.277228e-50 | -8.615850e-47 |
| Msa0051630 | Msa0556100 | 0.810343 | 1.208353e-50 | -8.615850e-47 |
| Msa0051740 | Msa0556100 | 0.812407 | 4.306875e-51 | -8.615850e-47 |
| Msa0051750 | Msa0556100 | 0.816650 | 4.957805e-52 | -8.615850e-47 |
| Msa0054820 | Msa0556100 | 0.807307 | 5.388125e-50 | -8.615850e-47 |
| Msa0056450 | Msa0556100 | 0.801440 | 8.995723e-49 | -8.615850e-47 |
| Msa0078480 | Msa0556100 | 0.802456 | 5.561537e-49 | -8.615850e-47 |
| Msa0080830 | Msa0556100 | 0.810445 | 1.148781e-50 | -8.615850e-47 |
| Msa0083280 | Msa0556100 | 0.816068 | 6.690732e-52 | -8.615850e-47 |
| Msa0090360 | Msa0556100 | 0.812138 | 4.930092e-51 | -8.615850e-47 |
| Msa0095560 | Msa0556100 | 0.803630 | 3.180425e-49 | -8.615850e-47 |
| Msa0100000 | Msa0556100 | 0.810718 | 1.002892e-50 | -8.615850e-47 |
| Msa0100160 | Msa0556100 | 0.815196 | 1.046518e-51 | -8.615850e-47 |
| Msa0104800 | Msa0556100 | 0.834394 | 3.073729e-56 | -8.615850e-47 |
| Msa0105520 | Msa0556100 | 0.801539 | 8.584655e-49 | -8.615850e-47 |
| Msa0126370 | Msa0556100 | 0.801959 | 7.039918e-49 | -8.615850e-47 |
| Msa0137840 | Msa0556100 | 0.808835 | 2.547894e-50 | -8.615850e-47 |
| Msa0138020 | Msa0556100 | 0.805832 | 1.103609e-49 | -8.615850e-47 |
| Msa0138750 | Msa0556100 | 0.802064 | 6.698091e-49 | -8.615850e-47 |
| Msa0140300 | Msa0556100 | 0.805568 | 1.253387e-49 | -8.615850e-47 |
| Msa0150800 | Msa0556100 | 0.810538 | 1.096725e-50 | -8.615850e-47 |
| Msa0151180 | Msa0556100 | 0.841071 | 5.933785e-58 | -8.615850e-47 |
| Msa0168870 | Msa0556100 | 0.809079 | 2.259565e-50 | -8.615850e-47 |
| Msa0170570 | Msa0556100 | 0.825767 | 3.917566e-54 | -8.615850e-47 |
| Msa0171120 | Msa0556100 | 0.837853 | 4.068317e-57 | -8.615850e-47 |
| Msa0171290 | Msa0556100 | 0.811823 | 5.773803e-51 | -8.615850e-47 |
| Msa0173390 | Msa0556100 | 0.806864 | 6.688100e-50 | -8.615850e-47 |
| Msa0183050 | Msa0556100 | 0.805060 | 1.602076e-49 | -8.615850e-47 |
| Msa0184040 | Msa0556100 | 0.811315 | 7.445977e-51 | -8.615850e-47 |
| Msa0188150 | Msa0556100 | 0.801865 | 7.359911e-49 | -8.615850e-47 |
| Msa0205010 | Msa0556100 | 0.808502 | 3.001610e-50 | -8.615850e-47 |
| Msa0207030 | Msa0556100 | 0.812628 | 3.853409e-51 | -8.615850e-47 |
| Msa0212990 | Msa0556100 | 0.800179 | 1.627541e-48 | -8.615850e-47 |
| Msa0223740 | Msa0556100 | 0.813274 | 2.780320e-51 | -8.615850e-47 |
| Msa0237200 | Msa0556100 | 0.817878 | 2.623507e-52 | -8.615850e-47 |
| Msa0378970 | Msa0556100 | 0.811550 | 6.620766e-51 | -8.615850e-47 |
| Msa0389910 | Msa0556100 | 0.831436 | 1.670738e-55 | -8.615850e-47 |
| Msa0392270 | Msa0556100 | 0.801723 | 7.871550e-49 | -8.615850e-47 |
| Msa0417270 | Msa0556100 | 0.811651 | 6.293133e-51 | -8.615850e-47 |
| Msa0426900 | Msa0556100 | 0.842310 | 2.795553e-58 | -8.615850e-47 |
| Msa0427040 | Msa0556100 | 0.823407 | 1.408583e-53 | -8.615850e-47 |
| Msa0428050 | Msa0556100 | 0.803914 | 2.776268e-49 | -8.615850e-47 |
| Msa0430870 | Msa0556100 | 0.817813 | 2.714370e-52 | -8.615850e-47 |
| Msa0436760 | Msa0556100 | 0.841545 | 4.451871e-58 | -8.615850e-47 |
| Msa0480780 | Msa0556100 | 0.804318 | 2.287712e-49 | -8.615850e-47 |
| Msa0481530 | Msa0556100 | 0.828293 | 9.745121e-55 | -8.615850e-47 |
| Msa0240300 | Msa0556100 | 0.805778 | 1.132550e-49 | -8.615850e-47 |
| Msa0241190 | Msa0556100 | 0.804807 | 1.808796e-49 | -8.615850e-47 |
| Msa0245940 | Msa0556100 | 0.807127 | 5.882883e-50 | -8.615850e-47 |
| Msa0259370 | Msa0556100 | 0.804169 | 2.458162e-49 | -8.615850e-47 |
| Msa0264930 | Msa0556100 | 0.807125 | 5.888303e-50 | -8.615850e-47 |
| Msa0271530 | Msa0556100 | 0.817408 | 3.349738e-52 | -8.615850e-47 |
| Msa0274970 | Msa0556100 | 0.824928 | 6.186592e-54 | -8.615850e-47 |
| Msa0285330 | Msa0556100 | 0.813441 | 2.555291e-51 | -8.615850e-47 |
| Msa0287410 | Msa0556100 | 0.802107 | 6.562865e-49 | -8.615850e-47 |
| Msa0287650 | Msa0556100 | 0.801851 | 7.407089e-49 | -8.615850e-47 |
| Msa0288100 | Msa0556100 | 0.813917 | 2.007730e-51 | -8.615850e-47 |
| Msa0291500 | Msa0556100 | 0.810112 | 1.355257e-50 | -8.615850e-47 |
| Msa0315680 | Msa0556100 | 0.822363 | 2.465346e-53 | -8.615850e-47 |
| Msa0324240 | Msa0556100 | 0.828172 | 1.042156e-54 | -8.615850e-47 |
| Msa0330340 | Msa0556100 | 0.800620 | 1.323199e-48 | -8.615850e-47 |
| Msa0334360 | Msa0556100 | 0.813501 | 2.478679e-51 | -8.615850e-47 |
| Msa0351810 | Msa0556100 | 0.805530 | 1.277159e-49 | -8.615850e-47 |
| Msa0359030 | Msa0556100 | 0.810594 | 1.066520e-50 | -8.615850e-47 |
| Msa0363790 | Msa0556100 | 0.806937 | 6.454067e-50 | -8.615850e-47 |
| Msa0484840 | Msa0556100 | 0.809397 | 1.930710e-50 | -8.615850e-47 |
| Msa0517090 | Msa0556100 | 0.806923 | 6.498724e-50 | -8.615850e-47 |
| Msa0517640 | Msa0556100 | 0.800526 | 1.382946e-48 | -8.615850e-47 |
| Msa0518380 | Msa0556100 | 0.806919 | 6.509721e-50 | -8.615850e-47 |
| Msa0523050 | Msa0556100 | 0.804283 | 2.326731e-49 | -8.615850e-47 |
| Msa0529890 | Msa0556100 | 0.821948 | 3.076921e-53 | -8.615850e-47 |
| Msa0532980 | Msa0556100 | 0.829793 | 4.219833e-55 | -8.615850e-47 |
| Msa0556100 | Msa0556860 | 0.812517 | 4.073266e-51 | -8.615850e-47 |
| Msa0556100 | Msa0557320 | 0.830310 | 3.155244e-55 | -8.615850e-47 |
| Msa0556100 | Msa0558230 | 0.833470 | 5.236381e-56 | -8.615850e-47 |
| Msa0556100 | Msa0561230 | 0.814016 | 1.909726e-51 | -8.615850e-47 |
| Msa0556100 | Msa0571130 | 0.827447 | 1.556601e-54 | -8.615850e-47 |
| Msa0556100 | Msa0571780 | 0.825645 | 4.186980e-54 | -8.615850e-47 |
| Msa0556100 | Msa0574390 | 0.820708 | 5.945364e-53 | -8.615850e-47 |
| Msa0556100 | Msa0575470 | 0.814138 | 1.794258e-51 | -8.615850e-47 |
| Msa0556100 | Msa0585560 | 0.822165 | 2.741012e-53 | -8.615850e-47 |
| Msa0556100 | Msa0587190 | 0.800318 | 1.524489e-48 | -8.615850e-47 |
| Msa0556100 | Msa0592440 | 0.816194 | 6.269903e-52 | -8.615850e-47 |
| Msa0556100 | Msa0612960 | 0.821096 | 4.840856e-53 | -8.615850e-47 |
| Msa0556100 | Msa0620230 | 0.809121 | 2.212343e-50 | -8.615850e-47 |
| Msa0556100 | Msa0620910 | 0.810836 | 9.455439e-51 | -8.615850e-47 |
| Msa0556100 | Msa0625720 | 0.820381 | 7.068983e-53 | -8.615850e-47 |
| Msa0556100 | Msa0627350 | 0.800165 | 1.638002e-48 | -8.615850e-47 |
| Msa0556100 | Msa0628500 | 0.803741 | 3.016362e-49 | -8.615850e-47 |
| Msa0556100 | Msa0636020 | 0.802064 | 6.698091e-49 | -8.615850e-47 |
| Msa0556100 | Msa0637900 | 0.808170 | 3.532803e-50 | -8.615850e-47 |
| Msa0556100 | Msa0652690 | 0.807702 | 4.442778e-50 | -8.615850e-47 |
| Msa0556100 | Msa0654720 | 0.816174 | 6.334282e-52 | -8.615850e-47 |
| Msa0556100 | Msa0661320 | 0.801870 | 7.341901e-49 | -8.615850e-47 |
| Msa0556100 | Msa0663390 | 0.826518 | 2.596782e-54 | -8.615850e-47 |
| Msa0556100 | Msa0667050 | 0.805288 | 1.435371e-49 | -8.615850e-47 |
| Msa0556100 | Msa0667790 | 0.806756 | 7.047523e-50 | -8.615850e-47 |
| Msa0556100 | Msa0679550 | 0.801511 | 8.698628e-49 | -8.615850e-47 |
| Msa0556100 | Msa0688070 | 0.821286 | 4.376072e-53 | -8.615850e-47 |
| Msa0556100 | Msa0692060 | 0.802912 | 4.478717e-49 | -8.615850e-47 |
| Msa0556100 | Msa0693430 | 0.810881 | 9.246245e-51 | -8.615850e-47 |
| Msa0556100 | Msa0698360 | 0.819295 | 1.251976e-52 | -8.615850e-47 |
| Msa0556100 | Msa0705190 | 0.803240 | 3.831210e-49 | -8.615850e-47 |
| Msa0556100 | Msa0710270 | 0.817535 | 3.136419e-52 | -8.615850e-47 |
| Msa0556100 | Msa0712560 | 0.815961 | 7.066990e-52 | -8.615850e-47 |
| Msa0556100 | Msa0715470 | 0.815549 | 8.731842e-52 | -8.615850e-47 |
| Msa0556100 | Msa0716960 | 0.803538 | 3.324169e-49 | -8.615850e-47 |
| Msa0556100 | Msa0717010 | 0.802783 | 4.762468e-49 | -8.615850e-47 |
| Msa0556100 | Msa0718750 | 0.803583 | 3.252988e-49 | -8.615850e-47 |
| Msa0556100 | Msa0721970 | 0.808824 | 2.561733e-50 | -8.615850e-47 |
| Msa0556100 | Msa0724000 | 0.811193 | 7.914545e-51 | -8.615850e-47 |
| Msa0556100 | Msa0740510 | 0.800278 | 1.553414e-48 | -8.615850e-47 |
| Msa0556100 | Msa0744100 | 0.810818 | 9.538020e-51 | -8.615850e-47 |
| Msa0556100 | Msa0748430 | 0.802932 | 4.435618e-49 | -8.615850e-47 |
| Msa0556100 | Msa0748730 | 0.810544 | 1.093508e-50 | -8.615850e-47 |
| Msa0556100 | Msa0750170 | 0.832974 | 6.960210e-56 | -8.615850e-47 |
| Msa0556100 | Msa0753990 | -0.811266 | 7.630981e-51 | -8.615850e-47 |
| Msa0556100 | Msa0762970 | 0.826452 | 2.692159e-54 | -8.615850e-47 |
| Msa0556100 | Msa0763890 | 0.807839 | 4.154118e-50 | -8.615850e-47 |
| Msa0556100 | Msa0763920 | 0.804289 | 2.320416e-49 | -8.615850e-47 |
| Msa0556100 | Msa0773590 | 0.830622 | 2.646907e-55 | -8.615850e-47 |
| Msa0556100 | Msa0790660 | -0.806982 | 6.313106e-50 | -8.615850e-47 |
| Msa0556100 | Msa0794730 | 0.844900 | 5.676336e-59 | -8.615850e-47 |
| Msa0556100 | Msa0795250 | 0.806361 | 8.539578e-50 | -8.615850e-47 |
| Msa0556100 | Msa0811040 | 0.815306 | 9.892473e-52 | -8.615850e-47 |
| Msa0556100 | Msa0816590 | 0.819818 | 9.510871e-53 | -8.615850e-47 |
| Msa0556100 | Msa0820770 | 0.802501 | 5.444755e-49 | -8.615850e-47 |
| Msa0556100 | Msa0825270 | 0.800087 | 1.698638e-48 | -8.615850e-47 |
| Msa0556100 | Msa0827280 | 0.825826 | 3.793729e-54 | -8.615850e-47 |
| Msa0556100 | Msa0831590 | 0.811815 | 5.795714e-51 | -8.615850e-47 |
| Msa0556100 | Msa0844110 | 0.802610 | 5.170314e-49 | -8.615850e-47 |
| Msa0556100 | Msa0861090 | 0.803010 | 4.273788e-49 | -8.615850e-47 |
| Msa0556100 | Msa0861930 | 0.806839 | 6.769755e-50 | -8.615850e-47 |
| Msa0556100 | Msa0866400 | 0.833361 | 5.573224e-56 | -8.615850e-47 |
| Msa0556100 | Msa0866410 | 0.833153 | 6.278973e-56 | -8.615850e-47 |
| Msa0556100 | Msa0868160 | 0.806664 | 7.372050e-50 | -8.615850e-47 |
| Msa0556100 | Msa0869100 | 0.821680 | 3.549727e-53 | -8.615850e-47 |
| Msa0556100 | Msa0897080 | 0.805874 | 1.081305e-49 | -8.615850e-47 |
| Msa0556100 | Msa0897330 | 0.802493 | 5.466246e-49 | -8.615850e-47 |
| Msa0556100 | Msa0902760 | 0.800371 | 1.487448e-48 | -8.615850e-47 |
| Msa0556100 | Msa0906690 | 0.815140 | 1.076950e-51 | -8.615850e-47 |
| Msa0556100 | Msa0928130 | 0.800167 | 1.636549e-48 | -8.615850e-47 |
| Msa0556100 | Msa0932570 | 0.809372 | 1.954887e-50 | -8.615850e-47 |
| Msa0556100 | Msa0933100 | 0.810235 | 1.274835e-50 | -8.615850e-47 |
| Msa0556100 | Msa0933230 | 0.830802 | 2.391509e-55 | -8.615850e-47 |
| Msa0556100 | Msa0933310 | 0.839050 | 1.997933e-57 | -8.615850e-47 |
| Msa0556100 | Msa0939000 | 0.829809 | 4.182746e-55 | -8.615850e-47 |
| Msa0556100 | Msa0944660 | 0.807917 | 3.998277e-50 | -8.615850e-47 |
| Msa0556100 | Msa0945240 | 0.805464 | 1.318529e-49 | -8.615850e-47 |
| Msa0556100 | Msa0969520 | 0.809548 | 1.791623e-50 | -8.615850e-47 |
| Msa0556100 | Msa0970530 | 0.811398 | 7.142937e-51 | -8.615850e-47 |
| Msa0556100 | Msa0971090 | 0.834429 | 3.013026e-56 | -8.615850e-47 |
| Msa0556100 | Msa0974070 | 0.816211 | 6.215684e-52 | -8.615850e-47 |
| Msa0556100 | Msa0975940 | 0.811795 | 5.856394e-51 | -8.615850e-47 |
| Msa0556100 | Msa0980880 | 0.814562 | 1.446439e-51 | -8.615850e-47 |
| Msa0556100 | Msa0992580 | 0.801345 | 9.405536e-49 | -8.615850e-47 |
| Msa0556100 | Msa0999100 | 0.823767 | 1.160252e-53 | -8.615850e-47 |
| Msa0556100 | Msa1021540 | 0.804274 | 2.337263e-49 | -8.615850e-47 |
| Msa0556100 | Msa1023920 | 0.816493 | 5.375478e-52 | -8.615850e-47 |
| Msa0556100 | Msa1024750 | 0.805576 | 1.248554e-49 | -8.615850e-47 |
| Msa0556100 | Msa1028970 | 0.806105 | 9.668074e-50 | -8.615850e-47 |
| Msa0556100 | Msa1036300 | 0.800385 | 1.477817e-48 | -8.615850e-47 |
| Msa0556100 | Msa1036410 | 0.827324 | 1.666356e-54 | -8.615850e-47 |
| Msa0556100 | Msa1036440 | 0.807426 | 5.085533e-50 | -8.615850e-47 |
| Msa0556100 | Msa1043390 | 0.803883 | 2.818453e-49 | -8.615850e-47 |
| Msa0556100 | Msa1043450 | 0.803798 | 2.935653e-49 | -8.615850e-47 |
| Msa0556100 | Msa1050740 | 0.800037 | 1.739037e-48 | -8.615850e-47 |
| Msa0556100 | Msa1062920 | 0.815653 | 8.280180e-52 | -8.615850e-47 |
| Msa0556100 | Msa1082500 | 0.804728 | 1.879634e-49 | -8.615850e-47 |
| Msa0556100 | Msa1089320 | 0.820972 | 5.169997e-53 | -8.615850e-47 |
| Msa0556100 | Msa1093530 | 0.800810 | 1.210460e-48 | -8.615850e-47 |
| Msa0556100 | Msa1107900 | 0.808516 | 2.980318e-50 | -8.615850e-47 |
| Msa0556100 | Msa1113170 | 0.813271 | 2.784505e-51 | -8.615850e-47 |
| Msa0556100 | Msa1118110 | 0.806389 | 8.423962e-50 | -8.615850e-47 |
| Msa0556100 | Msa1130530 | 0.823613 | 1.260295e-53 | -8.615850e-47 |
| Msa0556100 | Msa1144890 | 0.802394 | 5.728569e-49 | -8.615850e-47 |
| Msa0556100 | Msa1147970 | 0.806482 | 8.052994e-50 | -8.615850e-47 |
| Msa0556100 | Msa1151910 | 0.801941 | 7.098893e-49 | -8.615850e-47 |
| Msa0556100 | Msa1154280 | 0.811101 | 8.283407e-51 | -8.615850e-47 |
| Msa0556100 | Msa1162780 | 0.805961 | 1.036760e-49 | -8.615850e-47 |
| Msa0556100 | Msa1188600 | -0.802675 | 5.011945e-49 | -8.615850e-47 |
| Msa0556100 | Msa1193290 | 0.807472 | 4.970608e-50 | -8.615850e-47 |
| Msa0556100 | Msa1207310 | 0.801677 | 8.041987e-49 | -8.615850e-47 |
| Msa0556100 | Msa1214880 | 0.806691 | 7.273394e-50 | -8.615850e-47 |
| Msa0556100 | Msa1214890 | 0.815653 | 8.280180e-52 | -8.615850e-47 |
| Msa0556100 | Msa1215920 | 0.809676 | 1.682456e-50 | -8.615850e-47 |
| Msa0556100 | Msa1224480 | 0.825771 | 3.907675e-54 | -8.615850e-47 |
| Msa0556100 | Msa1235740 | 0.816869 | 4.427300e-52 | -8.615850e-47 |
| Msa0556100 | Msa1240510 | 0.815630 | 8.377024e-52 | -8.615850e-47 |
| Msa0556100 | Msa1242580 | -0.823216 | 1.560826e-53 | -8.615850e-47 |
| Msa0556100 | Msa1270660 | 0.810999 | 8.715850e-51 | -8.615850e-47 |
| Msa0556100 | Msa1297290 | 0.806402 | 8.370057e-50 | -8.615850e-47 |
| Msa0556100 | Msa1305340 | 0.800551 | 1.366519e-48 | -8.615850e-47 |
| Msa0556100 | Msa1320820 | 0.816944 | 4.257702e-52 | -8.615850e-47 |
| Msa0556100 | Msa1331320 | 0.809917 | 1.493034e-50 | -8.615850e-47 |
| Msa0556100 | Msa1331350 | 0.814362 | 1.601417e-51 | -8.615850e-47 |
| Msa0556100 | Msa1331910 | 0.808271 | 3.361360e-50 | -8.615850e-47 |
| Msa0556100 | Msa1333730 | 0.812912 | 3.339398e-51 | -8.615850e-47 |
| Msa0556100 | Msa1341490 | 0.804270 | 2.341532e-49 | -8.615850e-47 |
| Msa0556100 | Msa1349520 | 0.860196 | 2.445503e-63 | -8.615850e-47 |
| Msa0556100 | Msa1359560 | 0.807223 | 5.612869e-50 | -8.615850e-47 |
| Msa0556100 | Msa1364210 | 0.821863 | 3.220670e-53 | -8.615850e-47 |
| Msa0556100 | Msa1368430 | 0.801591 | 8.377365e-49 | -8.615850e-47 |
| Msa0556100 | Msa1369000 | 0.812156 | 4.885082e-51 | -8.615850e-47 |
| Msa0556100 | Msa1370070 | -0.805546 | 1.267188e-49 | -8.615850e-47 |
| Msa0556100 | Msa1370740 | 0.817191 | 3.748412e-52 | -8.615850e-47 |
| Msa0556100 | Msa1371640 | 0.802675 | 5.013445e-49 | -8.615850e-47 |
| Msa0556100 | Msa1374470 | 0.830195 | 3.367698e-55 | -8.615850e-47 |
| Msa0556100 | Msa1376200 | 0.810765 | 9.797607e-51 | -8.615850e-47 |
| Msa0556100 | Msa1383230 | 0.808079 | 3.694482e-50 | -8.615850e-47 |
| Msa0556100 | Msa1384870 | 0.802827 | 4.662581e-49 | -8.615850e-47 |
| Msa0556100 | Msa1385000 | 0.807761 | 4.315957e-50 | -8.615850e-47 |
| Msa0556100 | Msa1391750 | 0.806264 | 8.951807e-50 | -8.615850e-47 |
| Msa0556100 | Msa1407580 | 0.800580 | 1.348076e-48 | -8.615850e-47 |
| Msa0556100 | Msa1410100 | 0.800145 | 1.653325e-48 | -8.615850e-47 |
| Msa0556100 | Msa1426570 | 0.822373 | 2.452926e-53 | -8.615850e-47 |
| Msa0556100 | Msa1449520 | 0.801034 | 1.088999e-48 | -8.615850e-47 |
| Msa0556100 | Msa1454620 | 0.815021 | 1.144137e-51 | -8.615850e-47 |
| Msa0556100 | Msa1466540 | 0.801836 | 7.462465e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556100 | MtrunA17_Chr4g0043821 | 94.570 | 221 | 10 | 1 | 1 | 219 | 1 | 221 | 2.05e-154 | 427 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0556100 | AT1G30070.1 | 66.516 | 221 | 70 | 1 | 1 | 217 | 1 | 221 | 1.42e-107 | 308 |
| Msa0556100 | AT1G30070.2 | 64.474 | 228 | 70 | 2 | 1 | 217 | 1 | 228 | 1.14e-104 | 301 |
Find 72 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGACATCAAACGAATT+TGG | 0.215867 | 4_1:+54141696 | None:intergenic |
| TAAACATAAACACTTATTCT+TGG | 0.255740 | 4_1:-54140718 | Msa0556100:three_prime_UTR |
| GCTCAACGATAGCTACTTAA+AGG | 0.259882 | 4_1:+54141118 | None:intergenic |
| ACCAGAGAAATGTAAGATTT+TGG | 0.261703 | 4_1:-54141613 | Msa0556100:CDS |
| ATATGCTTCACTTAATTTCA+TGG | 0.296866 | 4_1:-54141053 | Msa0556100:three_prime_UTR |
| ACCAAAATCTTACATTTCTC+TGG | 0.339359 | 4_1:+54141612 | None:intergenic |
| CTCCTCTCGCTTCATTCAGT+TGG | 0.363708 | 4_1:-54142539 | Msa0556100:CDS |
| ACCGTAGTTCCGGTTGAAAT+TGG | 0.369259 | 4_1:+54142588 | None:intergenic |
| CGCTTCATTCAGTTGGGATC+AGG | 0.369919 | 4_1:-54142532 | Msa0556100:CDS |
| AGAGGAATTTGCTTTAGATT+TGG | 0.371302 | 4_1:-54142842 | Msa0556100:CDS |
| CAAATCTAGCCAGTTTGCTT+TGG | 0.378797 | 4_1:+54141551 | None:intergenic |
| TCCTCTCGCTTCATTCAGTT+GGG | 0.385459 | 4_1:-54142538 | Msa0556100:CDS |
| CCAATCCATCTCTTTGTTGT+GGG | 0.393164 | 4_1:-54140896 | Msa0556100:three_prime_UTR |
| ACATATATACGCCAACAAAA+AGG | 0.393168 | 4_1:-54142908 | Msa0556100:five_prime_UTR |
| TCTTTCTCTTTATCCATGGC+TGG | 0.411562 | 4_1:+54141419 | None:intergenic |
| CGGGTCTTTCTCTTTATCCA+TGG | 0.420024 | 4_1:+54141415 | None:intergenic |
| TGAAGGTGAGACCGTAGTTC+CGG | 0.422141 | 4_1:+54142578 | None:intergenic |
| TCCAATCCATCTCTTTGTTG+TGG | 0.426159 | 4_1:-54140897 | Msa0556100:three_prime_UTR |
| ATATTATGAAATGAATACTT+TGG | 0.426551 | 4_1:-54141021 | Msa0556100:three_prime_UTR |
| AGTTCTTCCCTTGAATATCA+TGG | 0.429177 | 4_1:+54141673 | None:intergenic |
| CGAGATTCGTAACTTAGAAA+AGG | 0.436022 | 4_1:-54142758 | Msa0556100:intron |
| TGAAGGCTTCCAAAGCAAAC+TGG | 0.463661 | 4_1:-54141560 | Msa0556100:CDS |
| GCATGGACTGATGCTAGAAC+TGG | 0.466170 | 4_1:-54141154 | Msa0556100:CDS |
| TTTGCACTTCAAAGAAGATA+AGG | 0.467678 | 4_1:-54141532 | Msa0556100:intron |
| AGACCCGATGGCAGGAATCA+TGG | 0.483862 | 4_1:-54141399 | Msa0556100:CDS |
| ATTCCACCACCAATTTCAAC+CGG | 0.485269 | 4_1:-54142597 | Msa0556100:CDS |
| GTCAAGTTCCATGATATTCA+AGG | 0.487655 | 4_1:-54141681 | Msa0556100:CDS |
| CCCACAACAAAGAGATGGAT+TGG | 0.488099 | 4_1:+54140896 | None:intergenic |
| ACCAATTTCAACCGGAACTA+CGG | 0.489576 | 4_1:-54142589 | Msa0556100:CDS |
| AGTCCATGATTCCTGCCATC+GGG | 0.496977 | 4_1:+54141396 | None:intergenic |
| GTAGTTCCGGTTGAAATTGG+TGG | 0.503010 | 4_1:+54142591 | None:intergenic |
| TGCTCTGAGATTTGATCTCT+CGG | 0.507833 | 4_1:+54140801 | None:intergenic |
| TAAAAGGGTAATCATCACTT+TGG | 0.508151 | 4_1:-54141583 | Msa0556100:CDS |
| GAATTGAACATCTAAACCAC+TGG | 0.517518 | 4_1:+54141092 | None:intergenic |
| TATGTAGATATATGTGTCAC+TGG | 0.518048 | 4_1:-54141757 | Msa0556100:intron |
| TGCAGAATATGTATGAGGAT+GGG | 0.520999 | 4_1:-54141207 | Msa0556100:intron |
| CTCAACGATAGCTACTTAAA+GGG | 0.526180 | 4_1:+54141119 | None:intergenic |
| TAAGTACTCTGAGGATTGGT+GGG | 0.532481 | 4_1:-54140850 | Msa0556100:three_prime_UTR |
| TTGCAGAATATGTATGAGGA+TGG | 0.536928 | 4_1:-54141208 | Msa0556100:intron |
| GTTCCGGTTGAAATTGGTGG+TGG | 0.541368 | 4_1:+54142594 | None:intergenic |
| GAGATGGATTGGAGCGAACA+CGG | 0.541899 | 4_1:+54140907 | None:intergenic |
| AGGAATCATGGACTTGATGA+AGG | 0.541947 | 4_1:-54141387 | Msa0556100:intron |
| AAGTCCATGATTCCTGCCAT+CGG | 0.543469 | 4_1:+54141395 | None:intergenic |
| GCAGAATATGTATGAGGATG+GGG | 0.545792 | 4_1:-54141206 | Msa0556100:intron |
| AAAGAGAAAGACCCGATGGC+AGG | 0.547559 | 4_1:-54141407 | Msa0556100:CDS |
| AGAGGAGAATAACTGAGTAC+AGG | 0.548081 | 4_1:+54142555 | None:intergenic |
| AGAAAACAATTGCAAAAGCA+TGG | 0.549544 | 4_1:-54141171 | Msa0556100:CDS |
| GTAAGTACTCTGAGGATTGG+TGG | 0.555476 | 4_1:-54140851 | Msa0556100:three_prime_UTR |
| GTGAGAAGAGAAAGGATTCG+AGG | 0.555972 | 4_1:+54142784 | None:intergenic |
| TCTCGGAAGTGAGAAGAGAA+AGG | 0.558117 | 4_1:+54142776 | None:intergenic |
| TGAATTGCAGAATATGTATG+AGG | 0.568596 | 4_1:-54141212 | Msa0556100:intron |
| AAAGACCCACAACAAAGAGA+TGG | 0.579888 | 4_1:+54140891 | None:intergenic |
| GGTAATCATCACTTTGGTGA+AGG | 0.580072 | 4_1:-54141577 | Msa0556100:CDS |
| AGATGGATTGGAGCGAACAC+GGG | 0.591261 | 4_1:+54140908 | None:intergenic |
| AATTGAGCAGTTATCGTCTG+AGG | 0.602215 | 4_1:-54142646 | Msa0556100:intron |
| TATGTAAGTACTCTGAGGAT+TGG | 0.605560 | 4_1:-54140854 | Msa0556100:three_prime_UTR |
| GAGATCAAATCTCAGAGCAG+TGG | 0.615444 | 4_1:-54140797 | Msa0556100:three_prime_UTR |
| TCAAGTTCCATGATATTCAA+GGG | 0.618824 | 4_1:-54141680 | Msa0556100:CDS |
| TGCAATAGTGAAATTGCACA+AGG | 0.622130 | 4_1:-54141643 | Msa0556100:CDS |
| GTTGCAGCTGAAGCCAGCCA+TGG | 0.626054 | 4_1:-54141432 | Msa0556100:intron |
| TCAGGATAACGACAAAGTCA+AGG | 0.635580 | 4_1:-54142514 | Msa0556100:intron |
| GAATAACTGAGTACAGGTGA+AGG | 0.637142 | 4_1:+54142561 | None:intergenic |
| TAGATATATGTGTCACTGGA+GGG | 0.651331 | 4_1:-54141753 | Msa0556100:CDS |
| AATTGAACATCTAAACCACT+GGG | 0.662544 | 4_1:+54141093 | None:intergenic |
| TCCCAACTGAATGAAGCGAG+AGG | 0.662613 | 4_1:+54142537 | None:intergenic |
| TTGTATATGTAAGTACTCTG+AGG | 0.663394 | 4_1:-54140859 | Msa0556100:three_prime_UTR |
| GGAGGGTGTTGATGAGAGCA+AGG | 0.664107 | 4_1:-54141736 | Msa0556100:CDS |
| TGATGCTAGAACTGGAAAAG+CGG | 0.666042 | 4_1:-54141146 | Msa0556100:CDS |
| GGATAAAGAGAAAGACCCGA+TGG | 0.666807 | 4_1:-54141411 | Msa0556100:CDS |
| TGGAATCTGTGATGCACGTG+CGG | 0.678359 | 4_1:+54142614 | None:intergenic |
| GTAGATATATGTGTCACTGG+AGG | 0.689960 | 4_1:-54141754 | Msa0556100:intron |
| GCTATCGTTGAGCAACCCAG+TGG | 0.716143 | 4_1:-54141108 | Msa0556100:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAACAATACATCA+TGG | + | chr4_1:54141186-54141205 | None:intergenic | 15.0% |
| !! | AAATAAGCTAAAACAATTTA+TGG | - | chr4_1:54141438-54141457 | Msa0556100:intron | 15.0% |
| !! | ATATTATGAAATGAATACTT+TGG | - | chr4_1:54142616-54142635 | Msa0556100:CDS | 15.0% |
| !! | AAAATAATAACAATACATCA+TGG | + | chr4_1:54141186-54141205 | None:intergenic | 15.0% |
| !! | AAATAAGCTAAAACAATTTA+TGG | - | chr4_1:54141438-54141457 | Msa0556100:intron | 15.0% |
| !! | ATATTATGAAATGAATACTT+TGG | - | chr4_1:54142616-54142635 | Msa0556100:CDS | 15.0% |
| !! | ATGATATAGGCATTTAATTA+AGG | + | chr4_1:54141287-54141306 | None:intergenic | 20.0% |
| !!! | TCTATAAGCTATTTCTATTT+CGG | - | chr4_1:54141341-54141360 | Msa0556100:intron | 20.0% |
| !! | TACAAGATAGCTTAAAAAAA+TGG | + | chr4_1:54141630-54141649 | None:intergenic | 20.0% |
| !! | TATAGCAAAGAATAAGATAA+AGG | + | chr4_1:54141788-54141807 | None:intergenic | 20.0% |
| !! | TAAACATAAACACTTATTCT+TGG | - | chr4_1:54142919-54142938 | Msa0556100:five_prime_UTR | 20.0% |
| !! | ATGATATAGGCATTTAATTA+AGG | + | chr4_1:54141287-54141306 | None:intergenic | 20.0% |
| !!! | TCTATAAGCTATTTCTATTT+CGG | - | chr4_1:54141341-54141360 | Msa0556100:intron | 20.0% |
| !! | TACAAGATAGCTTAAAAAAA+TGG | + | chr4_1:54141630-54141649 | None:intergenic | 20.0% |
| !! | TATAGCAAAGAATAAGATAA+AGG | + | chr4_1:54141788-54141807 | None:intergenic | 20.0% |
| !! | TAAACATAAACACTTATTCT+TGG | - | chr4_1:54142919-54142938 | Msa0556100:five_prime_UTR | 20.0% |
| !!! | ATATGTGTCTGTTTTGATTT+TGG | + | chr4_1:54140715-54140734 | None:intergenic | 25.0% |
| ! | ATCGTATCATCGAAAAAAAA+TGG | - | chr4_1:54140771-54140790 | Msa0556100:three_prime_UTR | 25.0% |
| ! | AATAATTAGCACTAATCAAG+AGG | + | chr4_1:54140967-54140986 | None:intergenic | 25.0% |
| ! | TATTTATCTAATCAGTGCAT+AGG | + | chr4_1:54141264-54141283 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr4_1:54141574-54141593 | None:intergenic | 25.0% |
| ! | TGAAACTGAAAAACACAAAT+TGG | + | chr4_1:54141761-54141780 | None:intergenic | 25.0% |
| ! | ATTTATGTTGTAGTTACTCT+GGG | - | chr4_1:54141828-54141847 | Msa0556100:intron | 25.0% |
| ! | ATATGCTTCACTTAATTTCA+TGG | - | chr4_1:54142584-54142603 | Msa0556100:CDS | 25.0% |
| !! | TGGATTGAAAGATATGTTTT+TGG | - | chr4_1:54142860-54142879 | Msa0556100:exon | 25.0% |
| !! | ATTCTGATGAACTTTTATCA+TGG | - | chr4_1:54142888-54142907 | Msa0556100:five_prime_UTR | 25.0% |
| !!! | ATATGTGTCTGTTTTGATTT+TGG | + | chr4_1:54140715-54140734 | None:intergenic | 25.0% |
| ! | ATCGTATCATCGAAAAAAAA+TGG | - | chr4_1:54140771-54140790 | Msa0556100:three_prime_UTR | 25.0% |
| ! | AATAATTAGCACTAATCAAG+AGG | + | chr4_1:54140967-54140986 | None:intergenic | 25.0% |
| ! | TATTTATCTAATCAGTGCAT+AGG | + | chr4_1:54141264-54141283 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr4_1:54141574-54141593 | None:intergenic | 25.0% |
| ! | TGAAACTGAAAAACACAAAT+TGG | + | chr4_1:54141761-54141780 | None:intergenic | 25.0% |
| ! | ATTTATGTTGTAGTTACTCT+GGG | - | chr4_1:54141828-54141847 | Msa0556100:intron | 25.0% |
| ! | ATATGCTTCACTTAATTTCA+TGG | - | chr4_1:54142584-54142603 | Msa0556100:CDS | 25.0% |
| !! | TGGATTGAAAGATATGTTTT+TGG | - | chr4_1:54142860-54142879 | Msa0556100:exon | 25.0% |
| !! | ATTCTGATGAACTTTTATCA+TGG | - | chr4_1:54142888-54142907 | Msa0556100:five_prime_UTR | 25.0% |
| ACATATATACGCCAACAAAA+AGG | - | chr4_1:54140729-54140748 | Msa0556100:three_prime_UTR | 30.0% | |
| ! | AATGAAACTCTCCTTTTTGT+TGG | + | chr4_1:54140743-54140762 | None:intergenic | 30.0% |
| ! | AGAGGAATTTGCTTTAGATT+TGG | - | chr4_1:54140795-54140814 | Msa0556100:three_prime_UTR | 30.0% |
| ! | CTTTTCTAAGTTACGAATCT+CGG | + | chr4_1:54140881-54140900 | None:intergenic | 30.0% |
| GAGAAATGATTAACGGAAAA+AGG | + | chr4_1:54140945-54140964 | None:intergenic | 30.0% | |
| TCAAGAGGAGAAATGATTAA+CGG | + | chr4_1:54140952-54140971 | None:intergenic | 30.0% | |
| ! | TCTTTCATTTCATAGCCTTT+TGG | - | chr4_1:54141213-54141232 | Msa0556100:intron | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | + | chr4_1:54141575-54141594 | None:intergenic | 30.0% |
| ! | ATAAGCTGAATGTTTTGCAA+AGG | - | chr4_1:54141691-54141710 | Msa0556100:CDS | 30.0% |
| ! | TTCTTTGCTATAGATCCAAA+TGG | - | chr4_1:54141796-54141815 | Msa0556100:intron | 30.0% |
| ATAAATCTTTGTCTGCCATT+TGG | + | chr4_1:54141814-54141833 | None:intergenic | 30.0% | |
| GATTTATGTTGTAGTTACTC+TGG | - | chr4_1:54141827-54141846 | Msa0556100:intron | 30.0% | |
| TATGTAGATATATGTGTCAC+TGG | - | chr4_1:54141880-54141899 | Msa0556100:intron | 30.0% | |
| AACTTGACATCAAACGAATT+TGG | + | chr4_1:54141944-54141963 | None:intergenic | 30.0% | |
| TCAAGTTCCATGATATTCAA+GGG | - | chr4_1:54141957-54141976 | Msa0556100:intron | 30.0% | |
| ! | ACCAGAGAAATGTAAGATTT+TGG | - | chr4_1:54142024-54142043 | Msa0556100:intron | 30.0% |
| ACCAAAATCTTACATTTCTC+TGG | + | chr4_1:54142028-54142047 | None:intergenic | 30.0% | |
| ! | AAAGTGATGATTACCCTTTT+AGG | + | chr4_1:54142055-54142074 | None:intergenic | 30.0% |
| TAAAAGGGTAATCATCACTT+TGG | - | chr4_1:54142054-54142073 | Msa0556100:intron | 30.0% | |
| TTTGCACTTCAAAGAAGATA+AGG | - | chr4_1:54142105-54142124 | Msa0556100:intron | 30.0% | |
| TGAATTGCAGAATATGTATG+AGG | - | chr4_1:54142425-54142444 | Msa0556100:intron | 30.0% | |
| AGAAAACAATTGCAAAAGCA+TGG | - | chr4_1:54142466-54142485 | Msa0556100:intron | 30.0% | |
| AATTGAACATCTAAACCACT+GGG | + | chr4_1:54142547-54142566 | None:intergenic | 30.0% | |
| ! | AGATGTTCAATTCCTGTTTT+TGG | - | chr4_1:54142555-54142574 | Msa0556100:CDS | 30.0% |
| ! | TTTTAGATACATTGCACTGT+AGG | - | chr4_1:54142646-54142665 | Msa0556100:intron | 30.0% |
| TTGTATATGTAAGTACTCTG+AGG | - | chr4_1:54142778-54142797 | Msa0556100:CDS | 30.0% | |
| ACATATATACGCCAACAAAA+AGG | - | chr4_1:54140729-54140748 | Msa0556100:three_prime_UTR | 30.0% | |
| ! | AATGAAACTCTCCTTTTTGT+TGG | + | chr4_1:54140743-54140762 | None:intergenic | 30.0% |
| ! | AGAGGAATTTGCTTTAGATT+TGG | - | chr4_1:54140795-54140814 | Msa0556100:three_prime_UTR | 30.0% |
| ! | CTTTTCTAAGTTACGAATCT+CGG | + | chr4_1:54140881-54140900 | None:intergenic | 30.0% |
| GAGAAATGATTAACGGAAAA+AGG | + | chr4_1:54140945-54140964 | None:intergenic | 30.0% | |
| TCAAGAGGAGAAATGATTAA+CGG | + | chr4_1:54140952-54140971 | None:intergenic | 30.0% | |
| ! | TCTTTCATTTCATAGCCTTT+TGG | - | chr4_1:54141213-54141232 | Msa0556100:intron | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | + | chr4_1:54141575-54141594 | None:intergenic | 30.0% |
| ! | ATAAGCTGAATGTTTTGCAA+AGG | - | chr4_1:54141691-54141710 | Msa0556100:CDS | 30.0% |
| ! | TTCTTTGCTATAGATCCAAA+TGG | - | chr4_1:54141796-54141815 | Msa0556100:intron | 30.0% |
| ATAAATCTTTGTCTGCCATT+TGG | + | chr4_1:54141814-54141833 | None:intergenic | 30.0% | |
| GATTTATGTTGTAGTTACTC+TGG | - | chr4_1:54141827-54141846 | Msa0556100:intron | 30.0% | |
| TATGTAGATATATGTGTCAC+TGG | - | chr4_1:54141880-54141899 | Msa0556100:intron | 30.0% | |
| AACTTGACATCAAACGAATT+TGG | + | chr4_1:54141944-54141963 | None:intergenic | 30.0% | |
| TCAAGTTCCATGATATTCAA+GGG | - | chr4_1:54141957-54141976 | Msa0556100:intron | 30.0% | |
| ! | ACCAGAGAAATGTAAGATTT+TGG | - | chr4_1:54142024-54142043 | Msa0556100:intron | 30.0% |
| ACCAAAATCTTACATTTCTC+TGG | + | chr4_1:54142028-54142047 | None:intergenic | 30.0% | |
| ! | AAAGTGATGATTACCCTTTT+AGG | + | chr4_1:54142055-54142074 | None:intergenic | 30.0% |
| TAAAAGGGTAATCATCACTT+TGG | - | chr4_1:54142054-54142073 | Msa0556100:intron | 30.0% | |
| TTTGCACTTCAAAGAAGATA+AGG | - | chr4_1:54142105-54142124 | Msa0556100:intron | 30.0% | |
| TGAATTGCAGAATATGTATG+AGG | - | chr4_1:54142425-54142444 | Msa0556100:intron | 30.0% | |
| AGAAAACAATTGCAAAAGCA+TGG | - | chr4_1:54142466-54142485 | Msa0556100:intron | 30.0% | |
| AATTGAACATCTAAACCACT+GGG | + | chr4_1:54142547-54142566 | None:intergenic | 30.0% | |
| ! | AGATGTTCAATTCCTGTTTT+TGG | - | chr4_1:54142555-54142574 | Msa0556100:CDS | 30.0% |
| ! | TTTTAGATACATTGCACTGT+AGG | - | chr4_1:54142646-54142665 | Msa0556100:intron | 30.0% |
| TTGTATATGTAAGTACTCTG+AGG | - | chr4_1:54142778-54142797 | Msa0556100:CDS | 30.0% | |
| !!! | GTGTCTGTTTTGATTTTGGA+AGG | + | chr4_1:54140711-54140730 | None:intergenic | 35.0% |
| TCATCGAAAAAAAATGGCAG+AGG | - | chr4_1:54140777-54140796 | Msa0556100:three_prime_UTR | 35.0% | |
| CGAGATTCGTAACTTAGAAA+AGG | - | chr4_1:54140879-54140898 | Msa0556100:three_prime_UTR | 35.0% | |
| GGAATAGAAGCGAAATGAAA+TGG | + | chr4_1:54140924-54140943 | None:intergenic | 35.0% | |
| ! | TCATAGCCTTTTGGATTGAA+AGG | - | chr4_1:54141222-54141241 | Msa0556100:intron | 35.0% |
| ! | CATAGCCTTTTGGATTGAAA+GGG | - | chr4_1:54141223-54141242 | Msa0556100:intron | 35.0% |
| TCGATCAGTGTCTATGATAT+AGG | + | chr4_1:54141300-54141319 | None:intergenic | 35.0% | |
| !! | CTTATTTTCACAAGCTCTTC+GGG | + | chr4_1:54141425-54141444 | None:intergenic | 35.0% |
| !! | GCTTATTTTCACAAGCTCTT+CGG | + | chr4_1:54141426-54141445 | None:intergenic | 35.0% |
| AGACTGTTCAGAATAACTAG+TGG | + | chr4_1:54141482-54141501 | None:intergenic | 35.0% | |
| CATGTCGTAAATGCTAAGAA+TGG | - | chr4_1:54141548-54141567 | Msa0556100:CDS | 35.0% | |
| AAATGAGCCAATACAAACAG+AGG | - | chr4_1:54141735-54141754 | Msa0556100:CDS | 35.0% | |
| ! | AAATTGGCCTCTGTTTGTAT+TGG | + | chr4_1:54141745-54141764 | None:intergenic | 35.0% |
| ! | TAGATATATGTGTCACTGGA+GGG | - | chr4_1:54141884-54141903 | Msa0556100:intron | 35.0% |
| GTCAAGTTCCATGATATTCA+AGG | - | chr4_1:54141956-54141975 | Msa0556100:intron | 35.0% | |
| AGTTCTTCCCTTGAATATCA+TGG | + | chr4_1:54141967-54141986 | None:intergenic | 35.0% | |
| TGCAATAGTGAAATTGCACA+AGG | - | chr4_1:54141994-54142013 | Msa0556100:intron | 35.0% | |
| !! | AGATTTTGGTCAAGCCTAAA+AGG | - | chr4_1:54142038-54142057 | Msa0556100:intron | 35.0% |
| !! | GATTTTGGTCAAGCCTAAAA+GGG | - | chr4_1:54142039-54142058 | Msa0556100:intron | 35.0% |
| TTGCAGAATATGTATGAGGA+TGG | - | chr4_1:54142429-54142448 | Msa0556100:intron | 35.0% | |
| TGCAGAATATGTATGAGGAT+GGG | - | chr4_1:54142430-54142449 | Msa0556100:intron | 35.0% | |
| CTCAACGATAGCTACTTAAA+GGG | + | chr4_1:54142521-54142540 | None:intergenic | 35.0% | |
| GAATTGAACATCTAAACCAC+TGG | + | chr4_1:54142548-54142567 | None:intergenic | 35.0% | |
| ! | TATGTAAGTACTCTGAGGAT+TGG | - | chr4_1:54142783-54142802 | Msa0556100:CDS | 35.0% |
| !!! | GTGTCTGTTTTGATTTTGGA+AGG | + | chr4_1:54140711-54140730 | None:intergenic | 35.0% |
| TCATCGAAAAAAAATGGCAG+AGG | - | chr4_1:54140777-54140796 | Msa0556100:three_prime_UTR | 35.0% | |
| CGAGATTCGTAACTTAGAAA+AGG | - | chr4_1:54140879-54140898 | Msa0556100:three_prime_UTR | 35.0% | |
| GGAATAGAAGCGAAATGAAA+TGG | + | chr4_1:54140924-54140943 | None:intergenic | 35.0% | |
| ! | TCATAGCCTTTTGGATTGAA+AGG | - | chr4_1:54141222-54141241 | Msa0556100:intron | 35.0% |
| ! | CATAGCCTTTTGGATTGAAA+GGG | - | chr4_1:54141223-54141242 | Msa0556100:intron | 35.0% |
| TCGATCAGTGTCTATGATAT+AGG | + | chr4_1:54141300-54141319 | None:intergenic | 35.0% | |
| !! | CTTATTTTCACAAGCTCTTC+GGG | + | chr4_1:54141425-54141444 | None:intergenic | 35.0% |
| !! | GCTTATTTTCACAAGCTCTT+CGG | + | chr4_1:54141426-54141445 | None:intergenic | 35.0% |
| AGACTGTTCAGAATAACTAG+TGG | + | chr4_1:54141482-54141501 | None:intergenic | 35.0% | |
| CATGTCGTAAATGCTAAGAA+TGG | - | chr4_1:54141548-54141567 | Msa0556100:CDS | 35.0% | |
| AAATGAGCCAATACAAACAG+AGG | - | chr4_1:54141735-54141754 | Msa0556100:CDS | 35.0% | |
| ! | AAATTGGCCTCTGTTTGTAT+TGG | + | chr4_1:54141745-54141764 | None:intergenic | 35.0% |
| ! | TAGATATATGTGTCACTGGA+GGG | - | chr4_1:54141884-54141903 | Msa0556100:intron | 35.0% |
| GTCAAGTTCCATGATATTCA+AGG | - | chr4_1:54141956-54141975 | Msa0556100:intron | 35.0% | |
| AGTTCTTCCCTTGAATATCA+TGG | + | chr4_1:54141967-54141986 | None:intergenic | 35.0% | |
| TGCAATAGTGAAATTGCACA+AGG | - | chr4_1:54141994-54142013 | Msa0556100:intron | 35.0% | |
| !! | AGATTTTGGTCAAGCCTAAA+AGG | - | chr4_1:54142038-54142057 | Msa0556100:intron | 35.0% |
| !! | GATTTTGGTCAAGCCTAAAA+GGG | - | chr4_1:54142039-54142058 | Msa0556100:intron | 35.0% |
| TTGCAGAATATGTATGAGGA+TGG | - | chr4_1:54142429-54142448 | Msa0556100:intron | 35.0% | |
| TGCAGAATATGTATGAGGAT+GGG | - | chr4_1:54142430-54142449 | Msa0556100:intron | 35.0% | |
| CTCAACGATAGCTACTTAAA+GGG | + | chr4_1:54142521-54142540 | None:intergenic | 35.0% | |
| GAATTGAACATCTAAACCAC+TGG | + | chr4_1:54142548-54142567 | None:intergenic | 35.0% | |
| ! | TATGTAAGTACTCTGAGGAT+TGG | - | chr4_1:54142783-54142802 | Msa0556100:CDS | 35.0% |
| AATTGAGCAGTTATCGTCTG+AGG | - | chr4_1:54140991-54141010 | Msa0556100:three_prime_UTR | 40.0% | |
| ATTCCACCACCAATTTCAAC+CGG | - | chr4_1:54141040-54141059 | Msa0556100:three_prime_UTR | 40.0% | |
| ACCAATTTCAACCGGAACTA+CGG | - | chr4_1:54141048-54141067 | Msa0556100:three_prime_UTR | 40.0% | |
| GAATAACTGAGTACAGGTGA+AGG | + | chr4_1:54141079-54141098 | None:intergenic | 40.0% | |
| AGAGGAGAATAACTGAGTAC+AGG | + | chr4_1:54141085-54141104 | None:intergenic | 40.0% | |
| TCAGGATAACGACAAAGTCA+AGG | - | chr4_1:54141123-54141142 | Msa0556100:CDS | 40.0% | |
| TCGTACCCTTTCAATCCAAA+AGG | + | chr4_1:54141231-54141250 | None:intergenic | 40.0% | |
| GCTCATTTGAGCTTATCTAC+TGG | + | chr4_1:54141723-54141742 | None:intergenic | 40.0% | |
| ! | GTAGATATATGTGTCACTGG+AGG | - | chr4_1:54141883-54141902 | Msa0556100:intron | 40.0% |
| GGTAATCATCACTTTGGTGA+AGG | - | chr4_1:54142060-54142079 | Msa0556100:intron | 40.0% | |
| ! | CAAATCTAGCCAGTTTGCTT+TGG | + | chr4_1:54142089-54142108 | None:intergenic | 40.0% |
| TCTTTCTCTTTATCCATGGC+TGG | + | chr4_1:54142221-54142240 | None:intergenic | 40.0% | |
| AGGAATCATGGACTTGATGA+AGG | - | chr4_1:54142250-54142269 | Msa0556100:intron | 40.0% | |
| GCAGAATATGTATGAGGATG+GGG | - | chr4_1:54142431-54142450 | Msa0556100:intron | 40.0% | |
| TGATGCTAGAACTGGAAAAG+CGG | - | chr4_1:54142491-54142510 | Msa0556100:intron | 40.0% | |
| GCTCAACGATAGCTACTTAA+AGG | + | chr4_1:54142522-54142541 | None:intergenic | 40.0% | |
| GCATATCACTCTCCAAAAAC+AGG | + | chr4_1:54142570-54142589 | None:intergenic | 40.0% | |
| TCCAATCCATCTCTTTGTTG+TGG | - | chr4_1:54142740-54142759 | Msa0556100:intron | 40.0% | |
| ! | CCAATCCATCTCTTTGTTGT+GGG | - | chr4_1:54142741-54142760 | Msa0556100:intron | 40.0% |
| AAAGACCCACAACAAAGAGA+TGG | + | chr4_1:54142749-54142768 | None:intergenic | 40.0% | |
| ! | TAAGTACTCTGAGGATTGGT+GGG | - | chr4_1:54142787-54142806 | Msa0556100:CDS | 40.0% |
| !! | TGCTCTGAGATTTGATCTCT+CGG | + | chr4_1:54142839-54142858 | None:intergenic | 40.0% |
| !! | TATTCTTGGTGCTGTAGTCT+AGG | - | chr4_1:54142933-54142952 | Msa0556100:five_prime_UTR | 40.0% |
| AATTGAGCAGTTATCGTCTG+AGG | - | chr4_1:54140991-54141010 | Msa0556100:three_prime_UTR | 40.0% | |
| ATTCCACCACCAATTTCAAC+CGG | - | chr4_1:54141040-54141059 | Msa0556100:three_prime_UTR | 40.0% | |
| ACCAATTTCAACCGGAACTA+CGG | - | chr4_1:54141048-54141067 | Msa0556100:three_prime_UTR | 40.0% | |
| GAATAACTGAGTACAGGTGA+AGG | + | chr4_1:54141079-54141098 | None:intergenic | 40.0% | |
| AGAGGAGAATAACTGAGTAC+AGG | + | chr4_1:54141085-54141104 | None:intergenic | 40.0% | |
| TCAGGATAACGACAAAGTCA+AGG | - | chr4_1:54141123-54141142 | Msa0556100:CDS | 40.0% | |
| TCGTACCCTTTCAATCCAAA+AGG | + | chr4_1:54141231-54141250 | None:intergenic | 40.0% | |
| GCTCATTTGAGCTTATCTAC+TGG | + | chr4_1:54141723-54141742 | None:intergenic | 40.0% | |
| ! | GTAGATATATGTGTCACTGG+AGG | - | chr4_1:54141883-54141902 | Msa0556100:intron | 40.0% |
| GGTAATCATCACTTTGGTGA+AGG | - | chr4_1:54142060-54142079 | Msa0556100:intron | 40.0% | |
| ! | CAAATCTAGCCAGTTTGCTT+TGG | + | chr4_1:54142089-54142108 | None:intergenic | 40.0% |
| TCTTTCTCTTTATCCATGGC+TGG | + | chr4_1:54142221-54142240 | None:intergenic | 40.0% | |
| AGGAATCATGGACTTGATGA+AGG | - | chr4_1:54142250-54142269 | Msa0556100:intron | 40.0% | |
| GCAGAATATGTATGAGGATG+GGG | - | chr4_1:54142431-54142450 | Msa0556100:intron | 40.0% | |
| TGATGCTAGAACTGGAAAAG+CGG | - | chr4_1:54142491-54142510 | Msa0556100:intron | 40.0% | |
| GCTCAACGATAGCTACTTAA+AGG | + | chr4_1:54142522-54142541 | None:intergenic | 40.0% | |
| GCATATCACTCTCCAAAAAC+AGG | + | chr4_1:54142570-54142589 | None:intergenic | 40.0% | |
| TCCAATCCATCTCTTTGTTG+TGG | - | chr4_1:54142740-54142759 | Msa0556100:intron | 40.0% | |
| ! | CCAATCCATCTCTTTGTTGT+GGG | - | chr4_1:54142741-54142760 | Msa0556100:intron | 40.0% |
| AAAGACCCACAACAAAGAGA+TGG | + | chr4_1:54142749-54142768 | None:intergenic | 40.0% | |
| ! | TAAGTACTCTGAGGATTGGT+GGG | - | chr4_1:54142787-54142806 | Msa0556100:CDS | 40.0% |
| !! | TGCTCTGAGATTTGATCTCT+CGG | + | chr4_1:54142839-54142858 | None:intergenic | 40.0% |
| !! | GTCGTTTTGCGATTTCGTGA+AGG | + | chr4_1:54140834-54140853 | None:intergenic | 45.0% |
| GTGAGAAGAGAAAGGATTCG+AGG | + | chr4_1:54140856-54140875 | None:intergenic | 45.0% | |
| TCTCGGAAGTGAGAAGAGAA+AGG | + | chr4_1:54140864-54140883 | None:intergenic | 45.0% | |
| GTAGTTCCGGTTGAAATTGG+TGG | + | chr4_1:54141049-54141068 | None:intergenic | 45.0% | |
| ACCGTAGTTCCGGTTGAAAT+TGG | + | chr4_1:54141052-54141071 | None:intergenic | 45.0% | |
| TCCTCTCGCTTCATTCAGTT+GGG | - | chr4_1:54141099-54141118 | Msa0556100:three_prime_UTR | 45.0% | |
| ATGCTAAGAATGGCCCTGTT+TGG | - | chr4_1:54141558-54141577 | Msa0556100:CDS | 45.0% | |
| TGAAGGCTTCCAAAGCAAAC+TGG | - | chr4_1:54142077-54142096 | Msa0556100:intron | 45.0% | |
| CGGGTCTTTCTCTTTATCCA+TGG | + | chr4_1:54142225-54142244 | None:intergenic | 45.0% | |
| GGATAAAGAGAAAGACCCGA+TGG | - | chr4_1:54142226-54142245 | Msa0556100:intron | 45.0% | |
| AAGTCCATGATTCCTGCCAT+CGG | + | chr4_1:54142245-54142264 | None:intergenic | 45.0% | |
| CCCACAACAAAGAGATGGAT+TGG | + | chr4_1:54142744-54142763 | None:intergenic | 45.0% | |
| ! | GTAAGTACTCTGAGGATTGG+TGG | - | chr4_1:54142786-54142805 | Msa0556100:CDS | 45.0% |
| GAGATCAAATCTCAGAGCAG+TGG | - | chr4_1:54142840-54142859 | Msa0556100:CDS | 45.0% | |
| !! | GTCGTTTTGCGATTTCGTGA+AGG | + | chr4_1:54140834-54140853 | None:intergenic | 45.0% |
| GTGAGAAGAGAAAGGATTCG+AGG | + | chr4_1:54140856-54140875 | None:intergenic | 45.0% | |
| TCTCGGAAGTGAGAAGAGAA+AGG | + | chr4_1:54140864-54140883 | None:intergenic | 45.0% | |
| GTAGTTCCGGTTGAAATTGG+TGG | + | chr4_1:54141049-54141068 | None:intergenic | 45.0% | |
| ACCGTAGTTCCGGTTGAAAT+TGG | + | chr4_1:54141052-54141071 | None:intergenic | 45.0% | |
| TCCTCTCGCTTCATTCAGTT+GGG | - | chr4_1:54141099-54141118 | Msa0556100:three_prime_UTR | 45.0% | |
| ATGCTAAGAATGGCCCTGTT+TGG | - | chr4_1:54141558-54141577 | Msa0556100:CDS | 45.0% | |
| TGAAGGCTTCCAAAGCAAAC+TGG | - | chr4_1:54142077-54142096 | Msa0556100:intron | 45.0% | |
| CGGGTCTTTCTCTTTATCCA+TGG | + | chr4_1:54142225-54142244 | None:intergenic | 45.0% | |
| GGATAAAGAGAAAGACCCGA+TGG | - | chr4_1:54142226-54142245 | Msa0556100:intron | 45.0% | |
| AAGTCCATGATTCCTGCCAT+CGG | + | chr4_1:54142245-54142264 | None:intergenic | 45.0% | |
| CCCACAACAAAGAGATGGAT+TGG | + | chr4_1:54142744-54142763 | None:intergenic | 45.0% | |
| ! | GTAAGTACTCTGAGGATTGG+TGG | - | chr4_1:54142786-54142805 | Msa0556100:CDS | 45.0% |
| GAGATCAAATCTCAGAGCAG+TGG | - | chr4_1:54142840-54142859 | Msa0556100:CDS | 45.0% | |
| TGGAATCTGTGATGCACGTG+CGG | + | chr4_1:54141026-54141045 | None:intergenic | 50.0% | |
| GTTCCGGTTGAAATTGGTGG+TGG | + | chr4_1:54141046-54141065 | None:intergenic | 50.0% | |
| TGAAGGTGAGACCGTAGTTC+CGG | + | chr4_1:54141062-54141081 | None:intergenic | 50.0% | |
| CTCCTCTCGCTTCATTCAGT+TGG | - | chr4_1:54141098-54141117 | Msa0556100:three_prime_UTR | 50.0% | |
| TCCCAACTGAATGAAGCGAG+AGG | + | chr4_1:54141103-54141122 | None:intergenic | 50.0% | |
| CGCTTCATTCAGTTGGGATC+AGG | - | chr4_1:54141105-54141124 | Msa0556100:exon | 50.0% | |
| AAAGAGAAAGACCCGATGGC+AGG | - | chr4_1:54142230-54142249 | Msa0556100:intron | 50.0% | |
| AGTCCATGATTCCTGCCATC+GGG | + | chr4_1:54142244-54142263 | None:intergenic | 50.0% | |
| ! | GCATGGACTGATGCTAGAAC+TGG | - | chr4_1:54142483-54142502 | Msa0556100:intron | 50.0% |
| !! | AGATGGATTGGAGCGAACAC+GGG | + | chr4_1:54142732-54142751 | None:intergenic | 50.0% |
| !! | GAGATGGATTGGAGCGAACA+CGG | + | chr4_1:54142733-54142752 | None:intergenic | 50.0% |
| TGGAATCTGTGATGCACGTG+CGG | + | chr4_1:54141026-54141045 | None:intergenic | 50.0% | |
| GTTCCGGTTGAAATTGGTGG+TGG | + | chr4_1:54141046-54141065 | None:intergenic | 50.0% | |
| TGAAGGTGAGACCGTAGTTC+CGG | + | chr4_1:54141062-54141081 | None:intergenic | 50.0% | |
| CTCCTCTCGCTTCATTCAGT+TGG | - | chr4_1:54141098-54141117 | Msa0556100:three_prime_UTR | 50.0% | |
| TCCCAACTGAATGAAGCGAG+AGG | + | chr4_1:54141103-54141122 | None:intergenic | 50.0% | |
| CGCTTCATTCAGTTGGGATC+AGG | - | chr4_1:54141105-54141124 | Msa0556100:exon | 50.0% | |
| AAAGAGAAAGACCCGATGGC+AGG | - | chr4_1:54142230-54142249 | Msa0556100:intron | 50.0% | |
| AGTCCATGATTCCTGCCATC+GGG | + | chr4_1:54142244-54142263 | None:intergenic | 50.0% | |
| ! | GCATGGACTGATGCTAGAAC+TGG | - | chr4_1:54142483-54142502 | Msa0556100:intron | 50.0% |
| !! | AGATGGATTGGAGCGAACAC+GGG | + | chr4_1:54142732-54142751 | None:intergenic | 50.0% |
| !! | GAGATGGATTGGAGCGAACA+CGG | + | chr4_1:54142733-54142752 | None:intergenic | 50.0% |
| !! | GGAGGGTGTTGATGAGAGCA+AGG | - | chr4_1:54141901-54141920 | Msa0556100:intron | 55.0% |
| AGACCCGATGGCAGGAATCA+TGG | - | chr4_1:54142238-54142257 | Msa0556100:intron | 55.0% | |
| GCTATCGTTGAGCAACCCAG+TGG | - | chr4_1:54142529-54142548 | Msa0556100:CDS | 55.0% | |
| !! | GGAGGGTGTTGATGAGAGCA+AGG | - | chr4_1:54141901-54141920 | Msa0556100:intron | 55.0% |
| AGACCCGATGGCAGGAATCA+TGG | - | chr4_1:54142238-54142257 | Msa0556100:intron | 55.0% | |
| GCTATCGTTGAGCAACCCAG+TGG | - | chr4_1:54142529-54142548 | Msa0556100:CDS | 55.0% | |
| GTTGCAGCTGAAGCCAGCCA+TGG | - | chr4_1:54142205-54142224 | Msa0556100:intron | 60.0% | |
| GTTGCAGCTGAAGCCAGCCA+TGG | - | chr4_1:54142205-54142224 | Msa0556100:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 54140705 | 54142954 | 54140705 | ID=Msa0556100;Name=Msa0556100 |
| chr4_1 | mRNA | 54140705 | 54142954 | 54140705 | ID=Msa0556100-mRNA-1;Parent=Msa0556100;Name=Msa0556100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=85|1|1|1|1|1|5|415|219 |
| chr4_1 | exon | 54140705 | 54141224 | 54140705 | ID=Msa0556100-mRNA-1:exon:15919;Parent=Msa0556100-mRNA-1 |
| chr4_1 | exon | 54141388 | 54141447 | 54141388 | ID=Msa0556100-mRNA-1:exon:15918;Parent=Msa0556100-mRNA-1 |
| chr4_1 | exon | 54141533 | 54141772 | 54141533 | ID=Msa0556100-mRNA-1:exon:15917;Parent=Msa0556100-mRNA-1 |
| chr4_1 | exon | 54142515 | 54142658 | 54142515 | ID=Msa0556100-mRNA-1:exon:15916;Parent=Msa0556100-mRNA-1 |
| chr4_1 | exon | 54142759 | 54142954 | 54142759 | ID=Msa0556100-mRNA-1:exon:15915;Parent=Msa0556100-mRNA-1 |
| chr4_1 | five_prime_UTR | 54142870 | 54142954 | 54142870 | ID=Msa0556100-mRNA-1:five_prime_utr;Parent=Msa0556100-mRNA-1 |
| chr4_1 | CDS | 54142759 | 54142869 | 54142759 | ID=Msa0556100-mRNA-1:cds;Parent=Msa0556100-mRNA-1 |
| chr4_1 | CDS | 54142515 | 54142658 | 54142515 | ID=Msa0556100-mRNA-1:cds;Parent=Msa0556100-mRNA-1 |
| chr4_1 | CDS | 54141533 | 54141772 | 54141533 | ID=Msa0556100-mRNA-1:cds;Parent=Msa0556100-mRNA-1 |
| chr4_1 | CDS | 54141388 | 54141447 | 54141388 | ID=Msa0556100-mRNA-1:cds;Parent=Msa0556100-mRNA-1 |
| chr4_1 | CDS | 54141120 | 54141224 | 54141120 | ID=Msa0556100-mRNA-1:cds;Parent=Msa0556100-mRNA-1 |
| chr4_1 | three_prime_UTR | 54140705 | 54141119 | 54140705 | ID=Msa0556100-mRNA-1:three_prime_utr;Parent=Msa0556100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
