AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1029210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029210 MtrunA17_Chr7g0246111 92.353 510 7 4 1 482 1 506 0.0 939
Msa1029210 MtrunA17_Chr6g0459561 48.495 299 143 5 193 481 362 659 1.46e-95 302
Msa1029210 MtrunA17_Chr6g0459541 44.720 322 134 6 199 481 28 344 1.48e-90 280
Msa1029210 MtrunA17_Chr4g0026631 43.168 322 145 4 196 480 110 430 8.74e-80 254
Msa1029210 MtrunA17_Chr2g0321241 42.991 321 145 4 197 480 116 435 1.22e-79 254
Msa1029210 MtrunA17_Chr6g0459551 39.200 375 170 10 147 479 44 402 4.41e-79 253
Msa1029210 MtrunA17_Chr4g0004121 38.320 381 209 7 121 481 154 528 4.64e-77 250
Msa1029210 MtrunA17_Chr4g0052271 51.012 247 117 3 198 442 104 348 1.63e-76 245
Msa1029210 MtrunA17_Chr4g0038101 44.326 282 142 5 213 480 721 1001 1.06e-70 242
Msa1029210 MtrunA17_Chr5g0397121 42.532 308 131 8 213 480 513 814 6.91e-70 238
Msa1029210 MtrunA17_Chr6g0459531 40.753 292 137 4 199 481 53 317 7.14e-70 225
Msa1029210 MtrunA17_Chr6g0462581 41.391 302 141 6 213 480 500 799 8.03e-67 229
Msa1029210 MtrunA17_Chr3g0127401 41.042 307 163 6 163 461 40 336 8.75e-66 216
Msa1029210 MtrunA17_Chr8g0387641 39.812 319 135 7 213 480 521 833 1.32e-65 226
Msa1029210 MtrunA17_Chr1g0195731 42.321 293 143 6 213 480 934 1225 3.23e-65 228
Msa1029210 MtrunA17_Chr1g0195741 41.638 293 145 6 213 480 938 1229 1.99e-64 226
Msa1029210 MtrunA17_Chr3g0127431 41.727 278 150 5 163 438 43 310 6.87e-64 212
Msa1029210 MtrunA17_Chr1g0202371 38.816 304 148 4 213 480 397 698 2.32e-62 215
Msa1029210 MtrunA17_Chr3g0116131 42.373 295 140 6 213 480 902 1193 3.61e-62 219
Msa1029210 MtrunA17_Chr1g0202381 41.463 287 148 6 164 438 416 694 1.78e-61 214
Msa1029210 MtrunA17_Chr1g0204031 40.328 305 143 6 213 480 557 859 1.42e-60 213
Msa1029210 MtrunA17_Chr1g0192151 35.294 289 161 8 185 457 130 408 9.30e-49 172
Msa1029210 MtrunA17_Chr4g0014731 35.294 289 161 8 185 457 131 409 1.26e-48 172
Msa1029210 MtrunA17_Chr7g0255721 39.464 261 140 8 211 463 683 933 2.06e-48 179
Msa1029210 MtrunA17_Chr7g0255721 33.032 221 143 3 218 436 391 608 1.36e-25 110
Msa1029210 MtrunA17_Chr1g0180791 39.630 270 146 5 208 463 200 466 1.14e-47 176
Msa1029210 MtrunA17_Chr1g0180791 38.627 233 134 5 211 437 476 705 4.16e-46 171
Msa1029210 MtrunA17_Chr3g0145011 37.770 278 153 8 212 482 138 402 4.15e-47 167
Msa1029210 MtrunA17_Chr7g0264521 39.259 270 147 5 208 463 201 467 7.28e-47 173
Msa1029210 MtrunA17_Chr7g0264521 39.056 233 133 5 211 437 477 706 2.51e-46 172
Msa1029210 MtrunA17_Chr2g0327121 38.627 233 134 5 211 437 478 707 6.35e-46 171
Msa1029210 MtrunA17_Chr2g0327121 42.308 234 127 5 208 437 202 431 3.39e-44 166
Msa1029210 MtrunA17_Chr3g0141901 37.681 276 152 8 212 480 135 397 8.83e-46 164
Msa1029210 MtrunA17_Chr4g0050561 36.397 272 153 8 196 458 139 399 2.05e-45 164
Msa1029210 MtrunA17_Chr7g0255641 37.453 267 145 8 211 467 656 910 5.26e-44 166
Msa1029210 MtrunA17_Chr7g0255641 32.609 276 163 7 214 472 394 663 4.98e-29 121
Msa1029210 MtrunA17_Chr1g0182711 35.496 262 154 6 201 456 176 428 1.16e-41 154
Msa1029210 MtrunA17_Chr7g0262801 35.878 262 153 6 201 456 175 427 1.22e-41 154
Msa1029210 MtrunA17_Chr7g0255901 32.143 336 193 10 162 479 601 919 3.54e-41 157
Msa1029210 MtrunA17_Chr2g0277831 35.870 276 162 6 211 474 531 803 7.68e-41 156
Msa1029210 MtrunA17_Chr2g0277831 29.568 301 162 9 215 472 245 538 1.36e-29 122
Msa1029210 MtrunA17_Chr4g0033451 34.672 274 159 6 212 467 379 650 6.37e-38 148
Msa1029210 MtrunA17_Chr3g0108321 40.104 192 107 4 211 396 157 346 1.08e-36 139
Msa1029210 MtrunA17_Chr8g0345461 33.884 242 149 6 202 436 154 391 3.49e-36 139
Msa1029210 MtrunA17_Chr2g0316851 35.652 230 138 4 215 436 596 823 9.68e-36 142
Msa1029210 MtrunA17_Chr3g0086411 35.106 282 152 10 211 466 213 489 1.00e-35 139
Msa1029210 MtrunA17_Chr3g0086411 29.075 227 117 7 300 482 7 233 8.76e-16 79.7
Msa1029210 MtrunA17_Chr3g0135721 36.047 258 151 8 212 463 223 472 1.83e-35 140
Msa1029210 MtrunA17_Chr5g0432631 34.201 269 162 8 202 463 217 477 2.33e-35 140
Msa1029210 MtrunA17_Chr8g0362771 37.445 227 130 8 212 432 236 456 4.29e-35 139
Msa1029210 MtrunA17_Chr7g0255651 36.052 233 140 5 211 437 280 509 7.28e-35 137
Msa1029210 MtrunA17_Chr7g0255651 29.964 277 167 10 220 480 24 289 8.55e-16 80.1
Msa1029210 MtrunA17_Chr1g0200081 33.884 242 148 7 202 436 164 400 5.07e-34 132
Msa1029210 MtrunA17_Chr7g0255691 32.595 316 199 8 156 464 228 536 8.59e-34 134
Msa1029210 MtrunA17_Chr7g0255691 33.803 284 159 11 216 480 20 293 2.81e-27 115
Msa1029210 MtrunA17_Chr4g0043381 33.829 269 162 6 192 449 810 1073 9.28e-34 135
Msa1029210 MtrunA17_Chr4g0043381 27.037 270 170 11 218 462 554 821 1.32e-11 67.4
Msa1029210 MtrunA17_Chr4g0052411 36.797 231 136 6 212 436 228 454 1.43e-33 134
Msa1029210 MtrunA17_Chr2g0297281 36.797 231 136 6 212 436 285 511 3.29e-33 133
Msa1029210 MtrunA17_Chr7g0217421 36.364 231 137 6 212 436 38 264 3.52e-33 130
Msa1029210 MtrunA17_Chr6g0456351 36.207 232 141 5 209 436 313 541 5.79e-33 132
Msa1029210 MtrunA17_Chr2g0327231 36.649 191 115 3 189 375 322 510 8.26e-33 130
Msa1029210 MtrunA17_Chr2g0327231 36.585 123 69 3 208 329 148 262 3.60e-15 77.8
Msa1029210 MtrunA17_Chr3g0143721 36.364 231 137 6 212 436 248 474 1.20e-32 131
Msa1029210 MtrunA17_Chr3g0135761 34.496 258 155 8 212 463 221 470 1.68e-32 131
Msa1029210 MtrunA17_Chr6g0476861 35.565 239 139 7 208 436 192 425 9.32e-32 129
Msa1029210 MtrunA17_Chr7g0260601 35.146 239 140 7 208 436 235 468 2.18e-31 128
Msa1029210 MtrunA17_Chr3g0086401 30.303 297 174 7 211 479 383 674 3.48e-31 127
Msa1029210 MtrunA17_Chr3g0086401 31.159 276 144 8 247 479 128 400 3.15e-26 112
Msa1029210 MtrunA17_Chr3g0104211 35.565 239 141 7 208 437 299 533 9.63e-31 126
Msa1029210 MtrunA17_Chr7g0248361 35.294 238 131 8 213 436 192 420 2.26e-30 124
Msa1029210 MtrunA17_Chr5g0429571 29.738 343 193 9 139 437 204 542 6.40e-30 124
Msa1029210 MtrunA17_Chr4g0031821 35.043 234 137 7 213 436 320 548 6.45e-30 124
Msa1029210 MtrunA17_Chr2g0331161 31.522 276 171 7 207 472 409 676 7.48e-29 120
Msa1029210 MtrunA17_Chr2g0289231 29.703 303 191 8 142 430 224 518 1.24e-28 119
Msa1029210 MtrunA17_Chr5g0432641 33.929 224 141 5 212 432 190 409 1.73e-28 119
Msa1029210 MtrunA17_Chr1g0158881 33.992 253 158 7 215 464 331 577 1.81e-28 119
Msa1029210 MtrunA17_Chr8g0388371 33.465 254 149 7 205 443 396 644 3.57e-28 118
Msa1029210 MtrunA17_Chr3g0094871 33.761 234 141 7 212 436 10 238 1.48e-27 114
Msa1029210 MtrunA17_Chr3g0129971 36.864 236 137 7 212 437 295 528 3.06e-27 115
Msa1029210 MtrunA17_Chr3g0135781 39.264 163 93 4 212 372 54 212 3.36e-27 108
Msa1029210 MtrunA17_Chr4g0047411 32.157 255 141 11 247 475 211 459 1.48e-22 101
Msa1029210 MtrunA17_Chr8g0357301 33.838 198 117 7 249 436 506 699 7.04e-19 90.1
Msa1029210 MtrunA17_Chr5g0432391 33.103 145 92 3 290 432 81 222 1.75e-14 75.5
Msa1029210 MtrunA17_Chr4g0062081 43.590 78 42 2 217 292 11 88 9.49e-14 67.0
Msa1029210 MtrunA17_Chr5g0404291 28.358 201 119 4 248 426 387 584 9.89e-14 73.6
Msa1029210 MtrunA17_Chr4g0039781 32.192 146 96 2 248 393 368 510 1.41e-12 70.1
Msa1029210 MtrunA17_Chr6g0450161 32.653 147 94 3 248 393 362 504 1.95e-12 69.3
Msa1029210 MtrunA17_Chr1g0190401 26.702 191 130 6 209 392 673 860 3.37e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029210 AT2G45500.1 70.707 495 128 5 1 482 1 491 0.0 678
Msa1029210 AT2G45500.5 70.850 494 125 6 1 482 11 497 0.0 670
Msa1029210 AT2G45500.2 70.850 494 125 6 1 482 1 487 0.0 670
Msa1029210 AT2G45500.4 83.607 305 45 1 183 482 50 354 0.0 526
Msa1029210 AT2G45500.3 83.607 305 45 1 183 482 50 354 0.0 526
Msa1029210 AT3G27120.1 50.502 299 137 6 193 481 380 677 2.33e-96 305
Msa1029210 AT2G27600.1 43.168 322 145 4 196 480 112 432 1.45e-79 254
Msa1029210 AT1G80350.1 44.013 309 153 5 192 481 215 522 2.42e-78 254
Msa1029210 AT2G34560.2 43.478 299 151 5 198 481 94 389 1.06e-74 240
Msa1029210 AT2G34560.1 43.478 299 151 5 198 481 85 380 1.08e-74 240
Msa1029210 AT1G50140.2 43.038 316 158 8 183 480 658 969 3.47e-71 244
Msa1029210 AT1G50140.5 43.038 316 158 8 183 480 658 969 3.47e-71 244
Msa1029210 AT1G50140.3 43.038 316 158 8 183 480 680 991 4.22e-71 244
Msa1029210 AT1G50140.1 43.038 316 158 8 183 480 680 991 4.22e-71 244
Msa1029210 AT1G50140.4 43.038 316 158 8 183 480 680 991 4.22e-71 244
Msa1029210 AT3G19740.1 42.089 316 161 8 183 480 670 981 2.22e-70 242
Msa1029210 AT4G27680.1 41.275 298 161 5 169 458 42 333 4.97e-68 223
Msa1029210 AT1G64110.1 41.967 305 135 8 212 480 512 810 1.03e-67 232
Msa1029210 AT1G64110.5 41.967 305 135 8 212 480 515 813 1.26e-67 232
Msa1029210 AT1G64110.3 41.967 305 135 8 212 480 515 813 1.26e-67 232
Msa1029210 AT1G64110.2 41.967 305 135 8 212 480 517 815 1.31e-67 232
Msa1029210 AT1G64110.4 41.967 305 135 8 212 480 517 815 1.31e-67 232
Msa1029210 AT4G02480.1 42.662 293 142 5 213 480 960 1251 2.75e-66 231
Msa1029210 AT5G53540.1 40.604 298 163 5 169 458 45 336 3.95e-66 218
Msa1029210 AT4G28000.1 40.461 304 143 6 213 480 515 816 5.72e-66 228
Msa1029210 AT4G28000.2 40.461 304 143 6 213 480 517 818 6.10e-66 228
Msa1029210 AT5G52882.1 40.132 304 144 5 213 480 514 815 9.56e-66 227
Msa1029210 AT4G28000.3 47.368 228 116 3 213 438 517 742 2.74e-65 225
Msa1029210 AT4G24860.4 46.888 241 124 3 201 438 778 1017 1.46e-64 226
Msa1029210 AT4G24860.1 46.888 241 124 3 201 438 805 1044 1.70e-64 226
Msa1029210 AT4G24860.3 46.888 241 124 3 201 438 803 1042 1.78e-64 226
Msa1029210 AT4G24860.2 46.888 241 124 3 201 438 801 1040 1.86e-64 226
Msa1029210 AT1G02890.1 42.321 293 143 5 213 480 941 1232 1.34e-63 224
Msa1029210 AT1G62130.2 37.201 293 148 6 212 480 742 1022 9.01e-50 183
Msa1029210 AT1G62130.1 37.201 293 148 6 212 480 749 1029 9.63e-50 183
Msa1029210 AT3G56690.1 39.502 281 150 8 192 463 700 969 1.09e-48 180
Msa1029210 AT3G56690.1 35.747 221 138 2 218 436 387 605 3.18e-34 137
Msa1029210 AT1G09100.1 35.294 289 161 8 185 457 130 408 3.64e-48 171
Msa1029210 AT3G05530.1 35.052 291 163 8 183 457 129 409 5.39e-48 171
Msa1029210 AT1G02890.2 37.201 293 130 6 213 480 941 1204 1.90e-47 176
Msa1029210 AT5G43010.1 37.770 278 149 9 212 480 135 397 2.55e-46 166
Msa1029210 AT3G09840.1 37.762 286 159 6 208 477 199 481 2.85e-46 172
Msa1029210 AT3G09840.1 39.316 234 132 5 211 437 475 705 4.15e-44 166
Msa1029210 AT5G03340.1 38.889 270 148 5 208 463 199 465 3.13e-46 172
Msa1029210 AT5G03340.1 39.485 233 132 5 211 437 475 704 2.70e-45 169
Msa1029210 AT1G45000.1 37.681 276 152 8 212 480 135 397 4.22e-46 165
Msa1029210 AT3G53230.1 38.519 270 149 5 208 463 200 466 8.65e-46 171
Msa1029210 AT3G53230.1 39.056 233 133 5 211 437 476 705 7.89e-45 168
Msa1029210 AT5G19990.1 36.765 272 152 8 196 458 141 401 1.35e-44 162
Msa1029210 AT5G19990.3 36.765 272 152 8 196 458 141 401 1.35e-44 162
Msa1029210 AT5G20000.1 36.765 272 152 8 196 458 141 401 1.65e-44 161
Msa1029210 AT5G19990.2 36.765 272 152 8 196 458 83 343 1.87e-44 160
Msa1029210 AT1G03000.1 35.417 288 163 6 211 479 653 936 5.22e-43 163
Msa1029210 AT4G29040.1 36.641 262 151 6 201 456 173 425 6.18e-43 158
Msa1029210 AT2G20140.1 36.641 262 151 6 201 456 173 425 1.07e-42 157
Msa1029210 AT3G01610.1 36.900 271 154 7 211 468 523 789 1.61e-41 158
Msa1029210 AT3G01610.1 32.500 240 140 5 215 438 232 465 4.33e-28 118
Msa1029210 AT3G01610.2 36.900 271 154 7 211 468 523 789 1.63e-41 159
Msa1029210 AT3G01610.2 32.500 240 140 5 215 438 232 465 4.37e-28 118
Msa1029210 AT5G58290.1 37.768 233 136 5 211 437 150 379 3.62e-41 152
Msa1029210 AT3G15120.2 36.245 229 136 4 215 435 728 954 2.12e-37 147
Msa1029210 AT3G15120.1 36.245 229 136 4 215 435 718 944 2.41e-37 147
Msa1029210 AT2G03670.1 34.752 282 167 8 202 476 272 543 3.31e-36 142
Msa1029210 AT2G03670.1 35.842 279 153 11 217 480 23 290 2.93e-34 136
Msa1029210 AT1G05910.1 34.307 274 156 8 213 466 378 647 6.39e-36 142
Msa1029210 AT1G53750.1 33.884 242 149 6 202 436 154 391 7.32e-36 138
Msa1029210 AT2G03670.2 35.842 279 153 11 217 480 23 290 4.88e-35 136
Msa1029210 AT2G03670.2 42.000 150 82 2 202 346 272 421 3.49e-23 102
Msa1029210 AT3G02450.1 37.190 242 137 7 209 442 327 561 6.22e-35 138
Msa1029210 AT1G06430.1 36.797 231 136 6 212 436 216 442 1.27e-33 135
Msa1029210 AT1G06430.3 36.797 231 136 6 212 436 216 442 1.27e-33 135
Msa1029210 AT1G06430.2 36.797 231 136 6 212 436 216 442 1.27e-33 135
Msa1029210 AT2G30950.4 36.364 231 137 6 212 436 227 453 1.65e-33 134
Msa1029210 AT2G30950.1 36.364 231 137 6 212 436 223 449 1.74e-33 134
Msa1029210 AT2G30950.2 36.364 231 137 6 212 436 223 449 1.74e-33 134
Msa1029210 AT2G30950.3 36.364 231 137 6 212 436 223 449 1.74e-33 134
Msa1029210 AT5G42270.1 37.229 231 135 6 212 436 246 472 2.56e-33 134
Msa1029210 AT2G26140.1 35.156 256 156 7 212 463 223 472 4.13e-33 133
Msa1029210 AT1G50250.1 36.364 231 137 6 212 436 258 484 1.20e-32 132
Msa1029210 AT1G53780.2 32.780 241 151 6 202 435 347 583 1.42e-32 131
Msa1029210 AT1G53780.3 32.780 241 151 6 202 435 325 561 1.59e-32 131
Msa1029210 AT1G53780.1 32.780 241 151 6 202 435 326 562 1.63e-32 131
Msa1029210 AT1G53780.4 32.780 241 151 6 202 435 326 562 1.63e-32 131
Msa1029210 AT1G07510.1 35.417 240 140 7 213 442 324 558 3.71e-32 130
Msa1029210 AT5G08470.3 35.526 228 137 5 215 437 834 1056 4.63e-32 130
Msa1029210 AT5G08470.1 35.526 228 137 5 215 437 843 1065 4.96e-32 130
Msa1029210 AT2G29080.1 35.146 239 141 7 213 442 319 552 2.24e-31 128
Msa1029210 AT3G47060.1 30.220 364 196 11 121 442 209 556 3.72e-31 127
Msa1029210 AT5G15250.1 35.498 231 139 6 212 436 220 446 4.57e-31 127
Msa1029210 AT5G53170.1 35.294 255 152 8 215 464 361 607 2.13e-30 125
Msa1029210 AT5G58870.1 30.887 327 180 9 154 437 232 555 1.09e-29 123
Msa1029210 AT4G23940.1 35.968 253 144 6 205 443 419 667 1.14e-29 123
Msa1029210 AT5G15250.2 33.202 253 138 8 212 436 220 469 2.41e-28 118
Msa1029210 AT5G64580.1 32.993 294 163 9 156 437 274 545 4.51e-28 118
Msa1029210 AT4G04180.1 31.489 235 141 7 208 430 311 537 1.16e-26 114
Msa1029210 AT4G04180.2 31.489 235 141 7 208 430 306 532 1.22e-26 113
Msa1029210 AT3G16290.1 30.249 281 172 8 207 477 401 667 1.12e-25 111
Msa1029210 AT1G45000.2 38.849 139 79 3 212 345 135 272 6.44e-25 105
Msa1029210 AT5G08470.2 37.037 135 80 2 215 346 843 975 5.86e-22 100
Msa1029210 AT4G04910.1 31.395 258 139 11 247 475 248 496 1.88e-21 98.2
Msa1029210 AT1G79560.3 34.804 204 119 6 249 442 526 725 3.96e-21 97.4
Msa1029210 AT1G79560.1 34.804 204 119 6 249 442 526 725 4.28e-21 97.4
Msa1029210 AT1G79560.2 34.804 204 119 6 249 442 526 725 4.90e-21 97.4
Msa1029210 AT2G18330.1 32.394 142 91 3 248 388 384 521 2.46e-13 72.8
Msa1029210 AT4G24710.3 32.716 162 89 4 250 393 215 374 2.82e-12 69.3
Msa1029210 AT5G16930.1 32.192 146 94 3 248 392 397 538 2.84e-12 69.3
Msa1029210 AT4G24710.1 32.716 162 89 4 250 393 203 362 2.96e-12 68.9
Msa1029210 AT4G36580.1 31.690 142 92 3 248 388 381 518 4.55e-12 68.9
Msa1029210 AT3G03060.1 30.882 204 112 6 248 426 385 584 5.69e-12 68.6

Find 108 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATGTTTGACTAGGTTTC+GGG 0.221153 7_1:-62532380 None:intergenic
TTTCAAGGCAATATGATTTC+AGG 0.222782 7_1:-62535759 None:intergenic
ATCCAATTCCTGTGGCTTAT+TGG 0.227753 7_1:-62534497 None:intergenic
CAGCTTCCTTGACGTCAAAA+TGG 0.244361 7_1:+62532853 Msa1029210:CDS
CAAGTTTAAACAAAAGTAAA+TGG 0.245979 7_1:+62535552 Msa1029210:CDS
CATTGAAGAAGCACTGAAAT+TGG 0.247194 7_1:-62530482 None:intergenic
GACAAGGGCACCAAAGTTTA+TGG 0.255512 7_1:+62535698 Msa1029210:three_prime_UTR
CCAGATGTTTGACTAGGTTT+CGG 0.283554 7_1:-62532381 None:intergenic
GATGACATTGTGATTGTAAT+TGG 0.285252 7_1:+62533798 Msa1029210:CDS
AGGAGAGAAAACACAGTTAA+AGG 0.307847 7_1:-62530425 None:intergenic
TTTGAGATTTATCATAGATT+TGG 0.310939 7_1:-62530261 None:intergenic
AAAGGCAAAGCAAGCTTTAA+TGG 0.312478 7_1:+62532570 Msa1029210:CDS
AGGTAGCTCATTTGCCAATC+AGG 0.328156 7_1:+62532039 Msa1029210:intron
AATTGGATGATGCCGTTCTT+AGG 0.330851 7_1:+62534512 Msa1029210:CDS
GTAGTATTTGATAGTTTAGT+TGG 0.333617 7_1:-62532300 None:intergenic
AACAAGTCTCTTCTCTTTGT+TGG 0.337816 7_1:-62532607 None:intergenic
CTTTACCAAATGAAAATGTT+AGG 0.342458 7_1:+62534805 Msa1029210:CDS
ACCTTCTTCTCCTTCTTCTT+CGG 0.351247 7_1:+62530513 Msa1029210:CDS
ATGTTGAAACTATTTATTGA+TGG 0.354439 7_1:+62535732 Msa1029210:three_prime_UTR
AAGAAATCGATAAAGCTGTT+AGG 0.359640 7_1:+62530590 Msa1029210:CDS
TTAGAACCCAGCTCTCTAAT+TGG 0.361235 7_1:-62535342 None:intergenic
GAATTCCTTATCCAGTTTGA+TGG 0.364436 7_1:+62533759 Msa1029210:CDS
CTCTTTGGTCCGCCTGGTAA+TGG 0.372609 7_1:+62532768 Msa1029210:CDS
GAGAGATGGAATGAGGAGTT+TGG 0.374466 7_1:+62535584 Msa1029210:CDS
GCTTGTACGGACACTATTCT+TGG 0.381631 7_1:+62532997 Msa1029210:CDS
TGATTCTGAAGCCACTGCTT+TGG 0.387336 7_1:-62532805 None:intergenic
ATTTAAAACAAAGCCTTTCA+AGG 0.392962 7_1:-62535774 None:intergenic
AATTCCTTATCCAGTTTGAT+GGG 0.396055 7_1:+62533760 Msa1029210:CDS
AACCAATAAGCCACAGGAAT+TGG 0.397626 7_1:+62534495 Msa1029210:CDS
AGCTGTTAGGGCTGAAGAAT+GGG 0.399219 7_1:+62530603 Msa1029210:CDS
TAGGGCTGAAGAATGGGGTT+TGG 0.399472 7_1:+62530609 Msa1029210:CDS
CAATTTCAGTGCTTCTTCAA+TGG 0.404872 7_1:+62530483 Msa1029210:CDS
CATAAAAGTGATTATGCAAA+AGG 0.419153 7_1:-62530346 None:intergenic
TGGATGTCACCCCATCAAAC+TGG 0.427668 7_1:-62533770 None:intergenic
ACAAGTTTCTGAGAGATTGC+AGG 0.447126 7_1:+62531886 Msa1029210:CDS
TCGTTTGAAACCGAAGAAGA+AGG 0.449660 7_1:-62530523 None:intergenic
CACGTGTATGTATAATATAA+TGG 0.451025 7_1:-62535835 None:intergenic
TCACCCCATCAAACTGGATA+AGG 0.451624 7_1:-62533764 None:intergenic
AAGCTGTTAGGGCTGAAGAA+TGG 0.453233 7_1:+62530602 Msa1029210:CDS
AAATCCAGGTGGCCTGGAAA+AGG 0.456194 7_1:+62532552 Msa1029210:intron
AGCTTCCTTGACGTCAAAAT+GGG 0.456655 7_1:+62532854 Msa1029210:CDS
AGAAATCGATAAAGCTGTTA+GGG 0.462705 7_1:+62530591 Msa1029210:CDS
TTGCTTCTCTTTGGTCCGCC+TGG 0.465849 7_1:+62532762 Msa1029210:CDS
AATGGCAACCATTCCATTCA+AGG 0.471071 7_1:-62535817 None:intergenic
ATCGTCAAAAGATATCAAAA+TGG 0.471460 7_1:+62531858 Msa1029210:CDS
CCATTCAAGGCTGTATTGCC+AGG 0.472571 7_1:-62535804 None:intergenic
TCAAAAGATATCAAAATGGC+AGG 0.473502 7_1:+62531862 Msa1029210:CDS
CCTGGCAATACAGCCTTGAA+TGG 0.483864 7_1:+62535804 Msa1029210:three_prime_UTR
TTCCTTCATTCATCACTCCC+AGG 0.485135 7_1:+62530698 Msa1029210:CDS
TGAAATCATATTGCCTTGAA+AGG 0.485549 7_1:+62535761 Msa1029210:three_prime_UTR
CATTGCAGCTTCTTCACACA+AGG 0.491414 7_1:-62535316 None:intergenic
TTATCGAAATCCAGGTGGCC+TGG 0.491589 7_1:+62532546 Msa1029210:intron
AATGGGAAGAGCTTGAGAGA+TGG 0.492767 7_1:+62535570 Msa1029210:CDS
CCGAAACCTAGTCAAACATC+TGG 0.497956 7_1:+62532381 Msa1029210:CDS
AGCAGTTTGTGCACGGTTTG+AGG 0.498983 7_1:-62532271 None:intergenic
AATCACAATGTCATCAGGAT+TGG 0.499345 7_1:-62533790 None:intergenic
TTCACTACAGGAATGCTCAT+AGG 0.499729 7_1:+62530647 Msa1029210:CDS
TGAAAATTATGATACGAAAC+TGG 0.500786 7_1:+62532404 Msa1029210:CDS
AGCCACTGCTTTGGCAAGCA+TGG 0.503878 7_1:-62532796 None:intergenic
ATTACAATCACAATGTCATC+AGG 0.507002 7_1:-62533795 None:intergenic
ATGACGCTATTCTTCACTAC+AGG 0.510224 7_1:+62530635 Msa1029210:CDS
AATGATGCCAATTAGAGAGC+TGG 0.511129 7_1:+62535335 Msa1029210:CDS
AGCACGTCGCTTACTAGGTA+AGG 0.512942 7_1:-62534868 None:intergenic
GAGAACATAGCATACCTGAT+TGG 0.513560 7_1:-62532053 None:intergenic
AGAGCTTGAGAGATGGAATG+AGG 0.517140 7_1:+62535577 Msa1029210:CDS
AAGTTTAAACAAAAGTAAAT+GGG 0.518697 7_1:+62535553 Msa1029210:CDS
ACCGAAGAAGAAGGAGAAGA+AGG 0.522002 7_1:-62530514 None:intergenic
AGGTAGAGATCTAGAGATGC+TGG 0.523797 7_1:+62535113 Msa1029210:intron
GCATGGTTTACAGGATACTC+TGG 0.534864 7_1:+62535279 Msa1029210:intron
CAGGCTCTCAGTAGACGAGC+AGG 0.535200 7_1:+62531905 Msa1029210:CDS
ATAGAAGTCCTTCTGTTCGA+TGG 0.538003 7_1:+62532454 Msa1029210:CDS
AAAGCAAGCTTTAATGGAGA+TGG 0.543064 7_1:+62532576 Msa1029210:CDS
TCCAAGGCAATACCTCTAGC+TGG 0.549612 7_1:-62532646 None:intergenic
GGAGTGATGAATGAAGGAAC+AGG 0.553232 7_1:-62530694 None:intergenic
GGTAAGAGGACTGAGGTATG+AGG 0.557226 7_1:+62535499 Msa1029210:intron
CACCTGGGAGTGATGAATGA+AGG 0.559377 7_1:-62530700 None:intergenic
AAGAGAAGAGACTTGTTCAC+TGG 0.560846 7_1:+62532613 Msa1029210:CDS
TCTGCTAAAACACAAACTCA+AGG 0.566087 7_1:+62534833 Msa1029210:CDS
TAGAAGTCCTTCTGTTCGAT+GGG 0.566235 7_1:+62532455 Msa1029210:CDS
AGCATGGTCTTACCATTACC+AGG 0.568160 7_1:-62532780 None:intergenic
ATGATGCCAATTAGAGAGCT+GGG 0.568226 7_1:+62535336 Msa1029210:CDS
TCTGTTCGATGGGACGATGT+TGG 0.570316 7_1:+62532465 Msa1029210:CDS
GAACTGCAGCAGTTTGTGCA+CGG 0.573485 7_1:-62532278 None:intergenic
TGATGCCGTTCTTAGGAGAC+TGG 0.580216 7_1:+62534519 Msa1029210:CDS
GTGAAGCTGAAAAGCTTGTA+CGG 0.588120 7_1:+62532984 Msa1029210:CDS
ACATCGTCCCATCGAACAGA+AGG 0.588663 7_1:-62532462 None:intergenic
AAGGACGACAAATGAAAATG+AGG 0.591136 7_1:+62533716 Msa1029210:CDS
AGGTGCAACCAATAAGCCAC+AGG 0.594898 7_1:+62534489 Msa1029210:intron
CAATACAGCCTTGAATGGAA+TGG 0.604940 7_1:+62535809 Msa1029210:three_prime_UTR
CTGAAATGTAGAGCAAGACA+AGG 0.607620 7_1:+62535682 Msa1029210:three_prime_UTR
GACCATGCTTGCCAAAGCAG+TGG 0.609312 7_1:+62532794 Msa1029210:CDS
GAGTAGAACTAGCTTCGAGA+AGG 0.613002 7_1:-62530672 None:intergenic
TCATCAATGAAAATTACAGA+TGG 0.615857 7_1:-62533037 None:intergenic
GCTGTTAGGGCTGAAGAATG+GGG 0.620550 7_1:+62530604 Msa1029210:CDS
ATTCCTTATCCAGTTTGATG+GGG 0.624550 7_1:+62533761 Msa1029210:CDS
GAATCCTCAAAGAAAAGATG+AGG 0.629125 7_1:+62532341 Msa1029210:CDS
TCTCACCAGTCTCCTAAGAA+CGG 0.637516 7_1:-62534524 None:intergenic
CTGCTAAAACACAAACTCAA+GGG 0.643305 7_1:+62534834 Msa1029210:CDS
AGAAGGACTTCTATCTACAA+TGG 0.646183 7_1:-62532445 None:intergenic
CAAAAGATATCAAAATGGCA+GGG 0.647481 7_1:+62531863 Msa1029210:CDS
TGAGGACTTCAAGAAAGCAA+TGG 0.650387 7_1:+62535517 Msa1029210:CDS
ACGGCATCATCCAATTCCTG+TGG 0.676070 7_1:-62534505 None:intergenic
TGAAATGTAGAGCAAGACAA+GGG 0.680291 7_1:+62535683 Msa1029210:three_prime_UTR
GGTCTTCGAAGACCAGCTAG+AGG 0.690852 7_1:+62532634 Msa1029210:CDS
TTTACCAGGTAAGAGGACTG+AGG 0.698763 7_1:+62535492 Msa1029210:intron
TTGATAGTATAATGTCAACA+AGG 0.721787 7_1:+62533697 Msa1029210:CDS
ATGCTGGTAAAAGAAACCGA+AGG 0.728590 7_1:+62535129 Msa1029210:CDS
ATGGTCTTACCATTACCAGG+CGG 0.798518 7_1:-62532777 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTCAATTAAAATAAATTTA+TGG - chr7_1:62531521-62531540 None:intergenic 10.0%
!!! TTAAGGTTAATTATTTTTTT+TGG + chr7_1:62535468-62535487 Msa1029210:intron 10.0%
!! CAAAAAATCATTTAATACAA+GGG - chr7_1:62533185-62533204 None:intergenic 15.0%
!! ACAAAAAATCATTTAATACA+AGG - chr7_1:62533186-62533205 None:intergenic 15.0%
!! TTTCATCTTCTAATTAAAAT+AGG + chr7_1:62533318-62533337 Msa1029210:intron 15.0%
!! TGTTTAATTAGTTAAATAGA+TGG + chr7_1:62533578-62533597 Msa1029210:intron 15.0%
!! ATGCAATTATAATTATTAGA+TGG + chr7_1:62534102-62534121 Msa1029210:intron 15.0%
!! TGCAATTATAATTATTAGAT+GGG + chr7_1:62534103-62534122 Msa1029210:intron 15.0%
!! CAAAAATAATGAATCATATT+TGG - chr7_1:62535255-62535274 None:intergenic 15.0%
!! AAGTTTAAACAAAAGTAAAT+GGG + chr7_1:62535553-62535572 Msa1029210:CDS 15.0%
!!! ATTAATTTTACCATAAACTT+TGG - chr7_1:62535711-62535730 None:intergenic 15.0%
!!! TTTGAGATTTATCATAGATT+TGG - chr7_1:62530264-62530283 None:intergenic 20.0%
!!! ATTTGAATGATTTGTTTATG+TGG + chr7_1:62530777-62530796 Msa1029210:intron 20.0%
!!! TTTGAATGATTTGTTTATGT+GGG + chr7_1:62530778-62530797 Msa1029210:intron 20.0%
!!! TTTTTTCATTGATTAGTTGA+AGG + chr7_1:62530817-62530836 Msa1029210:intron 20.0%
!!! TTTTTCATTGATTAGTTGAA+GGG + chr7_1:62530818-62530837 Msa1029210:intron 20.0%
!! TGATTTAATATTTGTGTTGT+TGG + chr7_1:62530873-62530892 Msa1029210:intron 20.0%
!!! CTATTATTCAACTTTGATTT+TGG - chr7_1:62531266-62531285 None:intergenic 20.0%
!!! AGTTAAAATCTCTCTATTTT+TGG + chr7_1:62531423-62531442 Msa1029210:intron 20.0%
!! GATAATAAGAATCAAACAAA+TGG - chr7_1:62532531-62532550 None:intergenic 20.0%
!! ATGAAAACTATAATTCTTTG+AGG + chr7_1:62533128-62533147 Msa1029210:intron 20.0%
!!! ATGATTTTTTGTTTAATGCT+TGG + chr7_1:62533194-62533213 Msa1029210:intron 20.0%
!!! AGTAATCTACCTTTTTTTTT+TGG - chr7_1:62533359-62533378 None:intergenic 20.0%
!! ATTTACTAAACAGAAAGAAA+AGG + chr7_1:62533601-62533620 Msa1029210:intron 20.0%
!! TTAATATCATTTGAATGAAG+TGG - chr7_1:62533653-62533672 None:intergenic 20.0%
!! TTTAAAAGTGAAAACAAGAT+AGG - chr7_1:62534225-62534244 None:intergenic 20.0%
!!! ATATAAAAGTTTAGTATCGA+GGG - chr7_1:62534902-62534921 None:intergenic 20.0%
!!! AACTTTTATATGCATATTCT+TGG + chr7_1:62534911-62534930 Msa1029210:intron 20.0%
!! ATGCAAAAAAATTACCAATT+GGG + chr7_1:62534953-62534972 Msa1029210:intron 20.0%
!!! TTTTATTGTGTCCAAAATTT+GGG + chr7_1:62535227-62535246 Msa1029210:intron 20.0%
!!! TTCATTATTTTTGTTTTGCA+TGG + chr7_1:62535262-62535281 Msa1029210:intron 20.0%
!! ATAATTAACCTTAACAACAA+AGG - chr7_1:62535462-62535481 None:intergenic 20.0%
!!! TTATTTTTTTTGGTTTTACC+AGG + chr7_1:62535478-62535497 Msa1029210:intron 20.0%
!!! CATTTACTTTTGTTTAAACT+TGG - chr7_1:62535554-62535573 None:intergenic 20.0%
!! CAAGTTTAAACAAAAGTAAA+TGG + chr7_1:62535552-62535571 Msa1029210:CDS 20.0%
!! ATGTTGAAACTATTTATTGA+TGG + chr7_1:62535732-62535751 Msa1029210:three_prime_UTR 20.0%
!!! AAAGGCTTTGTTTTAAATTT+AGG + chr7_1:62535779-62535798 Msa1029210:three_prime_UTR 20.0%
!!! AAGGCTTTGTTTTAAATTTA+GGG + chr7_1:62535780-62535799 Msa1029210:three_prime_UTR 20.0%
! CATAAAAGTGATTATGCAAA+AGG - chr7_1:62530349-62530368 None:intergenic 25.0%
! GTTTCTGCTATATTAATGAT+GGG + chr7_1:62530725-62530744 Msa1029210:intron 25.0%
!!! TTTTCATTGATTAGTTGAAG+GGG + chr7_1:62530819-62530838 Msa1029210:intron 25.0%
! TTATCTTGTTAGAGTATGTT+TGG + chr7_1:62531010-62531029 Msa1029210:intron 25.0%
!! TTTTGACAAAAGCTATACTT+TGG + chr7_1:62531188-62531207 Msa1029210:intron 25.0%
! TCTTCAATTGACAGTAATTA+AGG - chr7_1:62531299-62531318 None:intergenic 25.0%
! TACAAACTTACATACGTTTA+TGG - chr7_1:62531479-62531498 None:intergenic 25.0%
! GCTAAAAGTTAATCCAATTT+CGG + chr7_1:62531552-62531571 Msa1029210:intron 25.0%
! ATTATAACTAAGACCGAAAT+TGG - chr7_1:62531568-62531587 None:intergenic 25.0%
! AATAGCAGATTTCTGATATT+CGG + chr7_1:62531585-62531604 Msa1029210:intron 25.0%
! TATGATTAACTCACTGAATT+CGG - chr7_1:62531666-62531685 None:intergenic 25.0%
! AATTCAGTGAGTTAATCATA+AGG + chr7_1:62531666-62531685 Msa1029210:intron 25.0%
! ATTCAGTGAGTTAATCATAA+GGG + chr7_1:62531667-62531686 Msa1029210:intron 25.0%
! CAACAAAAACATAAGATCAT+AGG - chr7_1:62531779-62531798 None:intergenic 25.0%
!!! CTATGATCTTATGTTTTTGT+TGG + chr7_1:62531777-62531796 Msa1029210:intron 25.0%
! ATCGTCAAAAGATATCAAAA+TGG + chr7_1:62531858-62531877 Msa1029210:CDS 25.0%
! AATTCTCGTAAAAGTCAAAA+CGG - chr7_1:62531968-62531987 None:intergenic 25.0%
! TGGAGAAAAAGGAATATTAA+TGG - chr7_1:62532234-62532253 None:intergenic 25.0%
!!! ACAAACATTTTTGGAGAAAA+AGG - chr7_1:62532245-62532264 None:intergenic 25.0%
!! GTAGTATTTGATAGTTTAGT+TGG - chr7_1:62532303-62532322 None:intergenic 25.0%
! TGAAAATTATGATACGAAAC+TGG + chr7_1:62532404-62532423 Msa1029210:CDS 25.0%
!!! AGCAACATTTTTTAATGTCA+CGG + chr7_1:62532830-62532849 Msa1029210:CDS 25.0%
! TCATCAATGAAAATTACAGA+TGG - chr7_1:62533040-62533059 None:intergenic 25.0%
!! ATCTGTAATTTTCATTGATG+AGG + chr7_1:62533039-62533058 Msa1029210:CDS 25.0%
!!! TTTTTGTTTAATGCTTGGTT+TGG + chr7_1:62533199-62533218 Msa1029210:intron 25.0%
! TAAGAACGTAGATGTAAAAA+TGG + chr7_1:62533257-62533276 Msa1029210:intron 25.0%
! AAGAACGTAGATGTAAAAAT+GGG + chr7_1:62533258-62533277 Msa1029210:intron 25.0%
!! ATCTCTTTTGATAAACTTCT+TGG + chr7_1:62533291-62533310 Msa1029210:intron 25.0%
!! TCTCTTTTGATAAACTTCTT+GGG + chr7_1:62533292-62533311 Msa1029210:intron 25.0%
!!! AATCTACCTTTTTTTTTTGG+TGG - chr7_1:62533356-62533375 None:intergenic 25.0%
! TGTGGAAATGATTAAAAATC+TGG - chr7_1:62533471-62533490 None:intergenic 25.0%
! TAGTGCTTGTCAAATTATAT+TGG - chr7_1:62533497-62533516 None:intergenic 25.0%
!! TTGATAGTATAATGTCAACA+AGG + chr7_1:62533697-62533716 Msa1029210:CDS 25.0%
!! TGCTCTTGTTAATCTATTTT+GGG + chr7_1:62533904-62533923 Msa1029210:intron 25.0%
! ACATAAAGTCATTTGTCAAA+GGG - chr7_1:62533960-62533979 None:intergenic 25.0%
!! TATAATTATTAGATGGGCTT+TGG + chr7_1:62534109-62534128 Msa1029210:intron 25.0%
!! ATAATTATTAGATGGGCTTT+GGG + chr7_1:62534110-62534129 Msa1029210:intron 25.0%
! TTTCATCCATCAATAAATAG+AGG - chr7_1:62534304-62534323 None:intergenic 25.0%
!! TCATACTTTTAATCCAGTAA+AGG - chr7_1:62534563-62534582 None:intergenic 25.0%
!! CTAACATTTTCATTTGGTAA+AGG - chr7_1:62534807-62534826 None:intergenic 25.0%
! CTTTACCAAATGAAAATGTT+AGG + chr7_1:62534805-62534824 Msa1029210:CDS 25.0%
!! AGTTTCCTAACATTTTCATT+TGG - chr7_1:62534813-62534832 None:intergenic 25.0%
!! TATAAAAGTTTAGTATCGAG+GGG - chr7_1:62534901-62534920 None:intergenic 25.0%
! CATATAAAAGTTTAGTATCG+AGG - chr7_1:62534903-62534922 None:intergenic 25.0%
!! TTTTATATGCATATTCTTGG+AGG + chr7_1:62534914-62534933 Msa1029210:intron 25.0%
! CATGCAAAAAAATTACCAAT+TGG + chr7_1:62534952-62534971 Msa1029210:intron 25.0%
! ACAAATTATAAACTCCCAAT+TGG - chr7_1:62534970-62534989 None:intergenic 25.0%
!!! ACTTACGATTTTTTTGTTAC+AGG + chr7_1:62535093-62535112 Msa1029210:intron 25.0%
! TCAAAATCTATACTTACCTT+CGG - chr7_1:62535148-62535167 None:intergenic 25.0%
! TAAAACAAAGAAGAGAGAAA+AGG - chr7_1:62535212-62535231 None:intergenic 25.0%
!!! GTTTTATTGTGTCCAAAATT+TGG + chr7_1:62535226-62535245 Msa1029210:intron 25.0%
!!! AAAATCTTCCTTTGTTGTTA+AGG + chr7_1:62535451-62535470 Msa1029210:intron 25.0%
!! ATTTAAAACAAAGCCTTTCA+AGG - chr7_1:62535777-62535796 None:intergenic 25.0%
! CACGTGTATGTATAATATAA+TGG - chr7_1:62535838-62535857 None:intergenic 25.0%
AAGAAATCGATAAAGCTGTT+AGG + chr7_1:62530590-62530609 Msa1029210:CDS 30.0%
AGAAATCGATAAAGCTGTTA+GGG + chr7_1:62530591-62530610 Msa1029210:CDS 30.0%
GGTTTCTGCTATATTAATGA+TGG + chr7_1:62530724-62530743 Msa1029210:intron 30.0%
!! GCAAAAGCATTAATCTTGTT+AGG + chr7_1:62530895-62530914 Msa1029210:intron 30.0%
TCTTAGAGTTGTTCTTAGTT+TGG + chr7_1:62530973-62530992 Msa1029210:intron 30.0%
! AGCTTTTGTAAAAACCACTA+TGG - chr7_1:62531068-62531087 None:intergenic 30.0%
! GGTTTTTACAAAAGCTATAC+TGG + chr7_1:62531072-62531091 Msa1029210:intron 30.0%
TCGATAAAATCTCATGATCA+TGG + chr7_1:62531215-62531234 Msa1029210:intron 30.0%
ATTACTGTCAATTGAAGACT+TGG + chr7_1:62531301-62531320 Msa1029210:intron 30.0%
AGCTTCTCAATAAGAACTTA+TGG + chr7_1:62531339-62531358 Msa1029210:intron 30.0%
!!! AGAGAGATTTTAACTTGTAC+AGG - chr7_1:62531418-62531437 None:intergenic 30.0%
ATGATTAACTCACTGAATTC+GGG - chr7_1:62531665-62531684 None:intergenic 30.0%
TCAAAAGATATCAAAATGGC+AGG + chr7_1:62531862-62531881 Msa1029210:CDS 30.0%
CAAAAGATATCAAAATGGCA+GGG + chr7_1:62531863-62531882 Msa1029210:CDS 30.0%
AGTCAAAACGGAATTCAAAA+AGG - chr7_1:62531956-62531975 None:intergenic 30.0%
!!! GTTTTTTCTTTTCCTCGTTT+TGG + chr7_1:62532095-62532114 Msa1029210:intron 30.0%
TCAGTGCTTCTTAAAACATA+TGG + chr7_1:62532129-62532148 Msa1029210:intron 30.0%
TACGTTTCACTGAACATTAT+TGG + chr7_1:62532184-62532203 Msa1029210:intron 30.0%
ACGTTTCACTGAACATTATT+GGG + chr7_1:62532185-62532204 Msa1029210:intron 30.0%
GATTCTTATTATCGAAATCC+AGG + chr7_1:62532538-62532557 Msa1029210:intron 30.0%
! CTGATGAACCTTTTCATTTT+AGG + chr7_1:62532738-62532757 Msa1029210:intron 30.0%
GAAGCAAACCTAAAATGAAA+AGG - chr7_1:62532749-62532768 None:intergenic 30.0%
!!! ATTTTAGGTTTGCTTCTCTT+TGG + chr7_1:62532753-62532772 Msa1029210:intron 30.0%
AACTCAACACAAACAAGTTA+GGG - chr7_1:62532899-62532918 None:intergenic 30.0%
AAACTCAACACAAACAAGTT+AGG - chr7_1:62532900-62532919 None:intergenic 30.0%
TCTCTCTCATCTATATAGAA+AGG + chr7_1:62533064-62533083 Msa1029210:intron 30.0%
GTGCAACTCTAATTGATTAT+TGG + chr7_1:62533223-62533242 Msa1029210:intron 30.0%
AGAACGTAGATGTAAAAATG+GGG + chr7_1:62533259-62533278 Msa1029210:intron 30.0%
!! GTCAAATTATATTGGTCTTG+TGG - chr7_1:62533489-62533508 None:intergenic 30.0%
TATCGTAAGTGACTAGATTT+AGG - chr7_1:62533531-62533550 None:intergenic 30.0%
AATTCCTTATCCAGTTTGAT+GGG + chr7_1:62533760-62533779 Msa1029210:CDS 30.0%
ATTACAATCACAATGTCATC+AGG - chr7_1:62533798-62533817 None:intergenic 30.0%
GATGACATTGTGATTGTAAT+TGG + chr7_1:62533798-62533817 Msa1029210:CDS 30.0%
TTCTCTATCTGTAATGAACA+TGG + chr7_1:62533846-62533865 Msa1029210:intron 30.0%
! GTGCTCTTGTTAATCTATTT+TGG + chr7_1:62533903-62533922 Msa1029210:intron 30.0%
CATAAAGTCATTTGTCAAAG+GGG - chr7_1:62533959-62533978 None:intergenic 30.0%
CACATAAAGTCATTTGTCAA+AGG - chr7_1:62533961-62533980 None:intergenic 30.0%
CTTTGACAAATGACTTTATG+TGG + chr7_1:62533959-62533978 Msa1029210:intron 30.0%
TGTGGTTAAAATTCTCTTCT+AGG + chr7_1:62533977-62533996 Msa1029210:intron 30.0%
GTGGTTAAAATTCTCTTCTA+GGG + chr7_1:62533978-62533997 Msa1029210:intron 30.0%
AAGATAGGAGTAAACTTTAG+AGG + chr7_1:62534161-62534180 Msa1029210:intron 30.0%
TCATTCTGTAACGATGTTAT+AGG - chr7_1:62534194-62534213 None:intergenic 30.0%
TTACAATGGAAACCATATGT+GGG - chr7_1:62534261-62534280 None:intergenic 30.0%
ATTACAATGGAAACCATATG+TGG - chr7_1:62534262-62534281 None:intergenic 30.0%
ATATGGCCTCTATTTATTGA+TGG + chr7_1:62534295-62534314 Msa1029210:intron 30.0%
ATGGATGAAAAACTAAACTG+TGG + chr7_1:62534314-62534333 Msa1029210:intron 30.0%
ATTTCTTCATTGTCCTTTAC+TGG + chr7_1:62534547-62534566 Msa1029210:intron 30.0%
AAACAAGAAGAGAGTTAGTA+AGG - chr7_1:62534754-62534773 None:intergenic 30.0%
!!! TACACTTTTAACTTTCTACG+CGG + chr7_1:62534994-62535013 Msa1029210:intron 30.0%
!!! TTTTGTTTTGCATGGTTTAC+AGG + chr7_1:62535270-62535289 Msa1029210:intron 30.0%
GCGCAACAAAAAAATTAAAG+TGG - chr7_1:62535409-62535428 None:intergenic 30.0%
TTTCAAGGCAATATGATTTC+AGG - chr7_1:62535762-62535781 None:intergenic 30.0%
TGAAATCATATTGCCTTGAA+AGG + chr7_1:62535761-62535780 Msa1029210:three_prime_UTR 30.0%
!!! TTGTTTTAAATTTAGGGACC+TGG + chr7_1:62535786-62535805 Msa1029210:three_prime_UTR 30.0%
!!! TGATCGATGAGTTTTTTGCA+GGG + chr7_1:62530391-62530410 Msa1029210:exon 35.0%
AGGAGAGAAAACACAGTTAA+AGG - chr7_1:62530428-62530447 None:intergenic 35.0%
GAAGAAGAAGAAGAAGATTG+AGG - chr7_1:62530448-62530467 None:intergenic 35.0%
!! CATTGAAGAAGCACTGAAAT+TGG - chr7_1:62530485-62530504 None:intergenic 35.0%
CAATTTCAGTGCTTCTTCAA+TGG + chr7_1:62530483-62530502 Msa1029210:CDS 35.0%
TTAGTTGAAGGGGAGAAAAA+TGG + chr7_1:62530829-62530848 Msa1029210:intron 35.0%
AAGGGGAGAAAAATGGTATA+TGG + chr7_1:62530836-62530855 Msa1029210:intron 35.0%
AGGGGAGAAAAATGGTATAT+GGG + chr7_1:62530837-62530856 Msa1029210:intron 35.0%
! TATACTGGTTGTCCTTAGTT+TGG + chr7_1:62531087-62531106 Msa1029210:intron 35.0%
TTGTCGTGTTAGAGTATGTT+TGG + chr7_1:62531124-62531143 Msa1029210:intron 35.0%
! AGCTTTTGTCAAAACCACTA+TGG - chr7_1:62531182-62531201 None:intergenic 35.0%
AGATGCAGCAAAACAAGAAT+GGG - chr7_1:62531623-62531642 None:intergenic 35.0%
AAGATGCAGCAAAACAAGAA+TGG - chr7_1:62531624-62531643 None:intergenic 35.0%
CCTTTGTCATCAAGTTACTA+AGG - chr7_1:62531750-62531769 None:intergenic 35.0%
! CCTTAGTAACTTGATGACAA+AGG + chr7_1:62531747-62531766 Msa1029210:intron 35.0%
AAGAGGAATAGGAACAAATG+AGG - chr7_1:62532009-62532028 None:intergenic 35.0%
TGGAATGGAAAAAGAGGAAT+AGG - chr7_1:62532020-62532039 None:intergenic 35.0%
! TATTCCTCTTTTTCCATTCC+AGG + chr7_1:62532019-62532038 Msa1029210:intron 35.0%
TCTCTGTAAACTGTAAGTAC+AGG + chr7_1:62532072-62532091 Msa1029210:intron 35.0%
CTCTGTAAACTGTAAGTACA+GGG + chr7_1:62532073-62532092 Msa1029210:intron 35.0%
! ATTTTGTTGAAGCCAAAACG+AGG - chr7_1:62532110-62532129 None:intergenic 35.0%
! AGGTGCTCTACAAACATTTT+TGG - chr7_1:62532254-62532273 None:intergenic 35.0%
GAATCCTCAAAGAAAAGATG+AGG + chr7_1:62532341-62532360 Msa1029210:CDS 35.0%
! TTCACCTCATCTTTTCTTTG+AGG - chr7_1:62532348-62532367 None:intergenic 35.0%
! TTTTCACCAGATGTTTGACT+AGG - chr7_1:62532390-62532409 None:intergenic 35.0%
AGAAGGACTTCTATCTACAA+TGG - chr7_1:62532448-62532467 None:intergenic 35.0%
TCTTATTATCGAAATCCAGG+TGG + chr7_1:62532541-62532560 Msa1029210:intron 35.0%
! AAAGGCAAAGCAAGCTTTAA+TGG + chr7_1:62532570-62532589 Msa1029210:CDS 35.0%
! AAAGCAAGCTTTAATGGAGA+TGG + chr7_1:62532576-62532595 Msa1029210:CDS 35.0%
AACAAGTCTCTTCTCTTTGT+TGG - chr7_1:62532610-62532629 None:intergenic 35.0%
TTACATAACCCAAAGAGACA+AGG - chr7_1:62532673-62532692 None:intergenic 35.0%
! AGACTTAAGAAGTGTAACCA+TGG + chr7_1:62532932-62532951 Msa1029210:intron 35.0%
TAGTGAGTACAAGTTAACCA+TGG - chr7_1:62532952-62532971 None:intergenic 35.0%
ACTTGTACTCACTACTCAAT+AGG + chr7_1:62532958-62532977 Msa1029210:intron 35.0%
AAATTTATAGCAGGAGTAGG+GGG - chr7_1:62533097-62533116 None:intergenic 35.0%
CAAATTTATAGCAGGAGTAG+GGG - chr7_1:62533098-62533117 None:intergenic 35.0%
CCAAATTTATAGCAGGAGTA+GGG - chr7_1:62533099-62533118 None:intergenic 35.0%
CTTGTTGCCAAATTTATAGC+AGG - chr7_1:62533106-62533125 None:intergenic 35.0%
ACTGCACCACCAAAAAAAAA+AGG + chr7_1:62533347-62533366 Msa1029210:intron 35.0%
AAGGACGACAAATGAAAATG+AGG + chr7_1:62533716-62533735 Msa1029210:CDS 35.0%
!! TTCAGATTTTAATCGTCTGC+TGG - chr7_1:62533742-62533761 None:intergenic 35.0%
GAATTCCTTATCCAGTTTGA+TGG + chr7_1:62533759-62533778 Msa1029210:CDS 35.0%
ATTCCTTATCCAGTTTGATG+GGG + chr7_1:62533761-62533780 Msa1029210:CDS 35.0%
AATCACAATGTCATCAGGAT+TGG - chr7_1:62533793-62533812 None:intergenic 35.0%
!! ATTAACAAGAGCACTGTTCA+TGG - chr7_1:62533897-62533916 None:intergenic 35.0%
CTGGAATTCGAAAAACTCAT+GGG + chr7_1:62534005-62534024 Msa1029210:intron 35.0%
TAAATAGAGGCCATATTCTC+AGG - chr7_1:62534291-62534310 None:intergenic 35.0%
AACTGTGGCTATTGTAAATC+TGG + chr7_1:62534329-62534348 Msa1029210:intron 35.0%
TTCCTTTCCCTTCTGAATAT+AGG + chr7_1:62534469-62534488 Msa1029210:intron 35.0%
TTCTCCACTTAAAGTCACAT+CGG - chr7_1:62534609-62534628 None:intergenic 35.0%
!!! CTTCTTGTTTTTACTGTGCT+AGG + chr7_1:62534764-62534783 Msa1029210:intron 35.0%
TCTGCTAAAACACAAACTCA+AGG + chr7_1:62534833-62534852 Msa1029210:CDS 35.0%
CTGCTAAAACACAAACTCAA+GGG + chr7_1:62534834-62534853 Msa1029210:CDS 35.0%
!!! CATATTTGGTGCCCAAATTT+TGG - chr7_1:62535241-62535260 None:intergenic 35.0%
!!! TTTTGGTTTTACCAGGTAAG+AGG + chr7_1:62535485-62535504 Msa1029210:intron 35.0%
TGAAATGTAGAGCAAGACAA+GGG + chr7_1:62535683-62535702 Msa1029210:three_prime_UTR 35.0%
!!! GTGATCGATGAGTTTTTTGC+AGG + chr7_1:62530390-62530409 Msa1029210:exon 40.0%
ACCTTCTTCTCCTTCTTCTT+CGG + chr7_1:62530513-62530532 Msa1029210:CDS 40.0%
! TCGTTTGAAACCGAAGAAGA+AGG - chr7_1:62530526-62530545 None:intergenic 40.0%
ATGACGCTATTCTTCACTAC+AGG + chr7_1:62530635-62530654 Msa1029210:CDS 40.0%
TTCACTACAGGAATGCTCAT+AGG + chr7_1:62530647-62530666 Msa1029210:CDS 40.0%
ATATAGCAGAAACCTCACCT+GGG - chr7_1:62530718-62530737 None:intergenic 40.0%
AATATAGCAGAAACCTCACC+TGG - chr7_1:62530719-62530738 None:intergenic 40.0%
GGGGAGAAAAATGGTATATG+GGG + chr7_1:62530838-62530857 Msa1029210:intron 40.0%
!! TTCTTAGTTTGGTGCTAGCT+AGG + chr7_1:62530984-62531003 Msa1029210:intron 40.0%
GATGCAGCAAAACAAGAATG+GGG - chr7_1:62531622-62531641 None:intergenic 40.0%
TAATCATAAGGGACAGCCTT+TGG + chr7_1:62531678-62531697 Msa1029210:intron 40.0%
CACTGTCACACACAAGATTA+TGG - chr7_1:62531817-62531836 None:intergenic 40.0%
! ACAAGTTTCTGAGAGATTGC+AGG + chr7_1:62531886-62531905 Msa1029210:CDS 40.0%
GAGAACATAGCATACCTGAT+TGG - chr7_1:62532056-62532075 None:intergenic 40.0%
CACTGAACATTATTGGGTAC+TGG + chr7_1:62532191-62532210 Msa1029210:intron 40.0%
CAGATGTTTGACTAGGTTTC+GGG - chr7_1:62532383-62532402 None:intergenic 40.0%
CCAGATGTTTGACTAGGTTT+CGG - chr7_1:62532384-62532403 None:intergenic 40.0%
ATAGAAGTCCTTCTGTTCGA+TGG + chr7_1:62532454-62532473 Msa1029210:CDS 40.0%
TAGAAGTCCTTCTGTTCGAT+GGG + chr7_1:62532455-62532474 Msa1029210:CDS 40.0%
! AAGAGAAGAGACTTGTTCAC+TGG + chr7_1:62532613-62532632 Msa1029210:CDS 40.0%
AGCTTCCTTGACGTCAAAAT+GGG + chr7_1:62532854-62532873 Msa1029210:CDS 40.0%
!! AAGTACCCATTTTGACGTCA+AGG - chr7_1:62532862-62532881 None:intergenic 40.0%
TGTACTCACTACTCAATAGG+TGG + chr7_1:62532961-62532980 Msa1029210:intron 40.0%
GTACTCACTACTCAATAGGT+GGG + chr7_1:62532962-62532981 Msa1029210:intron 40.0%
GTGAAGCTGAAAAGCTTGTA+CGG + chr7_1:62532984-62533003 Msa1029210:CDS 40.0%
CCCTACTCCTGCTATAAATT+TGG + chr7_1:62533096-62533115 Msa1029210:intron 40.0%
GCCAAATTTATAGCAGGAGT+AGG - chr7_1:62533100-62533119 None:intergenic 40.0%
ACGTAGATGTAAAAATGGGG+TGG + chr7_1:62533262-62533281 Msa1029210:intron 40.0%
ATGTAAAAATGGGGTGGCTA+AGG + chr7_1:62533268-62533287 Msa1029210:intron 40.0%
CTGACATTCAAAAAAGACGC+TGG - chr7_1:62533420-62533439 None:intergenic 40.0%
! AATTCTCTTCTAGGGAATGC+TGG + chr7_1:62533986-62534005 Msa1029210:intron 40.0%
GCTGGAATTCGAAAAACTCA+TGG + chr7_1:62534004-62534023 Msa1029210:intron 40.0%
TCAGTTGTATCTCCCACATA+TGG + chr7_1:62534246-62534265 Msa1029210:intron 40.0%
TAATCTGCCTCCTGAGAATA+TGG + chr7_1:62534278-62534297 Msa1029210:intron 40.0%
CACCTATATTCAGAAGGGAA+AGG - chr7_1:62534474-62534493 None:intergenic 40.0%
GGTTGCACCTATATTCAGAA+GGG - chr7_1:62534479-62534498 None:intergenic 40.0%
TGGTTGCACCTATATTCAGA+AGG - chr7_1:62534480-62534499 None:intergenic 40.0%
AACCAATAAGCCACAGGAAT+TGG + chr7_1:62534495-62534514 Msa1029210:CDS 40.0%
ATCCAATTCCTGTGGCTTAT+TGG - chr7_1:62534500-62534519 None:intergenic 40.0%
AATTGGATGATGCCGTTCTT+AGG + chr7_1:62534512-62534531 Msa1029210:CDS 40.0%
ACATCGGCAATATGACATTC+TGG - chr7_1:62534593-62534612 None:intergenic 40.0%
ATTGCCGATGTGACTTTAAG+TGG + chr7_1:62534602-62534621 Msa1029210:intron 40.0%
ATGCTGGTAAAAGAAACCGA+AGG + chr7_1:62535129-62535148 Msa1029210:CDS 40.0%
AATGATGCCAATTAGAGAGC+TGG + chr7_1:62535335-62535354 Msa1029210:CDS 40.0%
ATGATGCCAATTAGAGAGCT+GGG + chr7_1:62535336-62535355 Msa1029210:CDS 40.0%
TTAGAACCCAGCTCTCTAAT+TGG - chr7_1:62535345-62535364 None:intergenic 40.0%
TTCTAACATTCTCACCGTCA+AGG + chr7_1:62535359-62535378 Msa1029210:intron 40.0%
TGAGGACTTCAAGAAAGCAA+TGG + chr7_1:62535517-62535536 Msa1029210:CDS 40.0%
CTGAAATGTAGAGCAAGACA+AGG + chr7_1:62535682-62535701 Msa1029210:three_prime_UTR 40.0%
CAATACAGCCTTGAATGGAA+TGG + chr7_1:62535809-62535828 Msa1029210:three_prime_UTR 40.0%
AATGGCAACCATTCCATTCA+AGG - chr7_1:62535820-62535839 None:intergenic 40.0%
ACCGAAGAAGAAGGAGAAGA+AGG - chr7_1:62530517-62530536 None:intergenic 45.0%
AAGCTGTTAGGGCTGAAGAA+TGG + chr7_1:62530602-62530621 Msa1029210:CDS 45.0%
AGCTGTTAGGGCTGAAGAAT+GGG + chr7_1:62530603-62530622 Msa1029210:CDS 45.0%
! GAGTAGAACTAGCTTCGAGA+AGG - chr7_1:62530675-62530694 None:intergenic 45.0%
GGAGTGATGAATGAAGGAAC+AGG - chr7_1:62530697-62530716 None:intergenic 45.0%
TTCCTTCATTCATCACTCCC+AGG + chr7_1:62530698-62530717 Msa1029210:CDS 45.0%
GAAATCACATTGCGCCATAG+TGG + chr7_1:62531051-62531070 Msa1029210:intron 45.0%
!! TCCTTAGTTTGGTGCTAGCT+AGG + chr7_1:62531098-62531117 Msa1029210:intron 45.0%
TCCTAGCTAGCACCAAACTA+AGG - chr7_1:62530988-62531007 None:intergenic 45.0%
GAATTCACAGTGTGCCATAG+TGG + chr7_1:62531165-62531184 Msa1029210:intron 45.0%
CACTGAATTCGGGTGCAATT+TGG - chr7_1:62531655-62531674 None:intergenic 45.0%
CTAAGCTGTCACATAGCCAA+AGG - chr7_1:62531697-62531716 None:intergenic 45.0%
GCTACCTGGAATGGAAAAAG+AGG - chr7_1:62532026-62532045 None:intergenic 45.0%
TGATTGGCAAATGAGCTACC+TGG - chr7_1:62532040-62532059 None:intergenic 45.0%
AGGTAGCTCATTTGCCAATC+AGG + chr7_1:62532039-62532058 Msa1029210:intron 45.0%
CCGAAACCTAGTCAAACATC+TGG + chr7_1:62532381-62532400 Msa1029210:CDS 45.0%
!! AAGCTTGCTTTGCCTTTTCC+AGG - chr7_1:62532567-62532586 None:intergenic 45.0%
CCTTGGAACCTTGTCTCTTT+GGG + chr7_1:62532662-62532681 Msa1029210:intron 45.0%
! ATGGTCTTACCATTACCAGG+CGG - chr7_1:62532780-62532799 None:intergenic 45.0%
! AGCATGGTCTTACCATTACC+AGG - chr7_1:62532783-62532802 None:intergenic 45.0%
!! TGATTCTGAAGCCACTGCTT+TGG - chr7_1:62532808-62532827 None:intergenic 45.0%
CAGCTTCCTTGACGTCAAAA+TGG + chr7_1:62532853-62532872 Msa1029210:CDS 45.0%
GCTTGTACGGACACTATTCT+TGG + chr7_1:62532997-62533016 Msa1029210:CDS 45.0%
TCACCCCATCAAACTGGATA+AGG - chr7_1:62533767-62533786 None:intergenic 45.0%
GGGATTGTTCCAGAAGAACT+CGG + chr7_1:62534130-62534149 Msa1029210:intron 45.0%
!! AACTCGGCTGCTCTAAAGAT+AGG + chr7_1:62534146-62534165 Msa1029210:intron 45.0%
TCTCAGGAGGCAGATTACAA+TGG - chr7_1:62534275-62534294 None:intergenic 45.0%
ATAGAGGCCATATTCTCAGG+AGG - chr7_1:62534288-62534307 None:intergenic 45.0%
TCTCACCAGTCTCCTAAGAA+CGG - chr7_1:62534527-62534546 None:intergenic 45.0%
! AAAAGAGCACGTCGCTTACT+AGG - chr7_1:62534876-62534895 None:intergenic 45.0%
! ATGCATATTCTTGGAGGCAC+CGG + chr7_1:62534920-62534939 Msa1029210:intron 45.0%
! TTTTTGCATGTTCCGCCTTC+CGG - chr7_1:62534942-62534961 None:intergenic 45.0%
AGGTAGAGATCTAGAGATGC+TGG + chr7_1:62535113-62535132 Msa1029210:intron 45.0%
GCATGGTTTACAGGATACTC+TGG + chr7_1:62535279-62535298 Msa1029210:intron 45.0%
CATTGCAGCTTCTTCACACA+AGG - chr7_1:62535319-62535338 None:intergenic 45.0%
TTTACCAGGTAAGAGGACTG+AGG + chr7_1:62535492-62535511 Msa1029210:intron 45.0%
AATGGGAAGAGCTTGAGAGA+TGG + chr7_1:62535570-62535589 Msa1029210:CDS 45.0%
AGAGCTTGAGAGATGGAATG+AGG + chr7_1:62535577-62535596 Msa1029210:CDS 45.0%
GAGAGATGGAATGAGGAGTT+TGG + chr7_1:62535584-62535603 Msa1029210:CDS 45.0%
!! GACAAGGGCACCAAAGTTTA+TGG + chr7_1:62535698-62535717 Msa1029210:three_prime_UTR 45.0%
!!! TTTTATTTTATTTTTAAGAA+TGG - chr7_1:62530230-62530249 None:intergenic 5.0%
GCTGTTAGGGCTGAAGAATG+GGG + chr7_1:62530604-62530623 Msa1029210:CDS 50.0%
TAGGGCTGAAGAATGGGGTT+TGG + chr7_1:62530609-62530628 Msa1029210:CDS 50.0%
CACCTGGGAGTGATGAATGA+AGG - chr7_1:62530703-62530722 None:intergenic 50.0%
TCATTCATCACTCCCAGGTG+AGG + chr7_1:62530703-62530722 Msa1029210:intron 50.0%
GGCAAATGAGCTACCTGGAA+TGG - chr7_1:62532035-62532054 None:intergenic 50.0%
AGCAGTTTGTGCACGGTTTG+AGG - chr7_1:62532274-62532293 None:intergenic 50.0%
GAACTGCAGCAGTTTGTGCA+CGG - chr7_1:62532281-62532300 None:intergenic 50.0%
ACATCGTCCCATCGAACAGA+AGG - chr7_1:62532465-62532484 None:intergenic 50.0%
TCTGTTCGATGGGACGATGT+TGG + chr7_1:62532465-62532484 Msa1029210:CDS 50.0%
TTATCGAAATCCAGGTGGCC+TGG + chr7_1:62532546-62532565 Msa1029210:intron 50.0%
AAATCCAGGTGGCCTGGAAA+AGG + chr7_1:62532552-62532571 Msa1029210:intron 50.0%
!! ACCAGCTAGAGGTATTGCCT+TGG + chr7_1:62532645-62532664 Msa1029210:intron 50.0%
TCCAAGGCAATACCTCTAGC+TGG - chr7_1:62532649-62532668 None:intergenic 50.0%
GCCTTGGAACCTTGTCTCTT+TGG + chr7_1:62532661-62532680 Msa1029210:intron 50.0%
CCCAAAGAGACAAGGTTCCA+AGG - chr7_1:62532665-62532684 None:intergenic 50.0%
TTATAGCAGGAGTAGGGGGT+GGG - chr7_1:62533093-62533112 None:intergenic 50.0%
TTTATAGCAGGAGTAGGGGG+TGG - chr7_1:62533094-62533113 None:intergenic 50.0%
TGGATGTCACCCCATCAAAC+TGG - chr7_1:62533773-62533792 None:intergenic 50.0%
TTAGAGCAGCCGAGTTCTTC+TGG - chr7_1:62534142-62534161 None:intergenic 50.0%
AGGTGCAACCAATAAGCCAC+AGG + chr7_1:62534489-62534508 Msa1029210:intron 50.0%
ACGGCATCATCCAATTCCTG+TGG - chr7_1:62534508-62534527 None:intergenic 50.0%
TGATGCCGTTCTTAGGAGAC+TGG + chr7_1:62534519-62534538 Msa1029210:CDS 50.0%
AGCACGTCGCTTACTAGGTA+AGG - chr7_1:62534871-62534890 None:intergenic 50.0%
!! ATATTCTTGGAGGCACCGGA+AGG + chr7_1:62534924-62534943 Msa1029210:intron 50.0%
TCTCACCGTCAAGGCAAATC+AGG + chr7_1:62535368-62535387 Msa1029210:intron 50.0%
! GCATGCCTGATTTGCCTTGA+CGG - chr7_1:62535376-62535395 None:intergenic 50.0%
CATACCTCAGTCCTCTTACC+TGG - chr7_1:62535499-62535518 None:intergenic 50.0%
GGTAAGAGGACTGAGGTATG+AGG + chr7_1:62535499-62535518 Msa1029210:intron 50.0%
CCATTCAAGGCTGTATTGCC+AGG - chr7_1:62535807-62535826 None:intergenic 50.0%
CCTGGCAATACAGCCTTGAA+TGG + chr7_1:62535804-62535823 Msa1029210:three_prime_UTR 50.0%
CGCGTCGCGTATAAGCTGAA+AGG + chr7_1:62530547-62530566 Msa1029210:CDS 55.0%
! TTTGCCTTTTCCAGGCCACC+TGG - chr7_1:62532559-62532578 None:intergenic 55.0%
GGTCTTCGAAGACCAGCTAG+AGG + chr7_1:62532634-62532653 Msa1029210:CDS 55.0%
TTGCTTCTCTTTGGTCCGCC+TGG + chr7_1:62532762-62532781 Msa1029210:CDS 55.0%
CTCTTTGGTCCGCCTGGTAA+TGG + chr7_1:62532768-62532787 Msa1029210:CDS 55.0%
GACCATGCTTGCCAAAGCAG+TGG + chr7_1:62532794-62532813 Msa1029210:CDS 55.0%
AGCCACTGCTTTGGCAAGCA+TGG - chr7_1:62532799-62532818 None:intergenic 55.0%
TATAGCAGGAGTAGGGGGTG+GGG - chr7_1:62533092-62533111 None:intergenic 55.0%
CAGGCTCTCAGTAGACGAGC+AGG + chr7_1:62531905-62531924 Msa1029210:CDS 60.0%
ATAGCAGGAGTAGGGGGTGG+GGG - chr7_1:62533091-62533110 None:intergenic 60.0%
!! TTCTTGGAGGCACCGGAAGG+CGG + chr7_1:62534927-62534946 Msa1029210:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 62530182 62535888 62530182 ID=Msa1029210;Name=Msa1029210
chr7_1 mRNA 62530182 62535888 62530182 ID=Msa1029210-mRNA-1;Parent=Msa1029210;Name=Msa1029210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=215|0.91|0.92|1|0.91|0.92|13|272|482
chr7_1 exon 62530182 62530719 62530182 ID=Msa1029210-mRNA-1:exon:13366;Parent=Msa1029210-mRNA-1
chr7_1 exon 62531835 62531926 62531835 ID=Msa1029210-mRNA-1:exon:13367;Parent=Msa1029210-mRNA-1
chr7_1 exon 62532041 62532060 62532041 ID=Msa1029210-mRNA-1:exon:13368;Parent=Msa1029210-mRNA-1
chr7_1 exon 62532267 62532486 62532267 ID=Msa1029210-mRNA-1:exon:13369;Parent=Msa1029210-mRNA-1
chr7_1 exon 62532560 62532655 62532560 ID=Msa1029210-mRNA-1:exon:13370;Parent=Msa1029210-mRNA-1
chr7_1 exon 62532760 62532875 62532760 ID=Msa1029210-mRNA-1:exon:13371;Parent=Msa1029210-mRNA-1
chr7_1 exon 62532980 62533060 62532980 ID=Msa1029210-mRNA-1:exon:13372;Parent=Msa1029210-mRNA-1
chr7_1 exon 62533696 62533819 62533696 ID=Msa1029210-mRNA-1:exon:13373;Parent=Msa1029210-mRNA-1
chr7_1 exon 62534491 62534540 62534491 ID=Msa1029210-mRNA-1:exon:13374;Parent=Msa1029210-mRNA-1
chr7_1 exon 62534786 62534876 62534786 ID=Msa1029210-mRNA-1:exon:13375;Parent=Msa1029210-mRNA-1
chr7_1 exon 62535115 62535150 62535115 ID=Msa1029210-mRNA-1:exon:13376;Parent=Msa1029210-mRNA-1
chr7_1 exon 62535292 62535374 62535292 ID=Msa1029210-mRNA-1:exon:13377;Parent=Msa1029210-mRNA-1
chr7_1 exon 62535500 62535888 62535500 ID=Msa1029210-mRNA-1:exon:13378;Parent=Msa1029210-mRNA-1
chr7_1 five_prime_UTR 62530182 62530396 62530182 ID=Msa1029210-mRNA-1:five_prime_utr;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62530397 62530719 62530397 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62531835 62531926 62531835 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62532041 62532060 62532041 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62532267 62532486 62532267 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62532560 62532655 62532560 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62532760 62532875 62532760 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62532980 62533060 62532980 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62533696 62533819 62533696 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62534491 62534540 62534491 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62534786 62534876 62534786 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62535115 62535150 62535115 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62535292 62535374 62535292 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 CDS 62535500 62535616 62535500 ID=Msa1029210-mRNA-1:cds;Parent=Msa1029210-mRNA-1
chr7_1 three_prime_UTR 62535617 62535888 62535617 ID=Msa1029210-mRNA-1:three_prime_utr;Parent=Msa1029210-mRNA-1
Gene Sequence

>Msa1029210

ATGAGTTTTTTGCAGGGAATCATTGATTCCTTTAACTGTGTTTTCTCTCCTCAATCTTCTTCTTCTTCTTCTTCTTCTTCTCAAACCAATTTCAGTGCTTCTTCAATGGAAGCTTCACCTTCTTCTCCTTCTTCTTCGGTTTCAAACGAACGCGTCGCGTATAAGCTGAAAGGCTACTACGATTTAGCAACACAAGAAATCGATAAAGCTGTTAGGGCTGAAGAATGGGGTTTGGTTGATGACGCTATTCTTCACTACAGGAATGCTCATAGGATCCTTCTCGAAGCTAGTTCTACTCCTGTTCCTTCATTCATCACTCCCAGTGAGAAACAGAAAGTACAATCATATCGTCAAAAGATATCAAAATGGCAGGGACAAGTTTCTGAGAGATTGCAGGCTCTCAGTAGACGAGCAGGTAGCTCATTTGCCAATCAGAGCACCTCAAACCGTGCACAAACTGCTGCAGTTCCAACTAAACTATCAAATACTACAAAAAAAGTGCTACAAAAGAATCCTCAAAGAAAAGATGAGGTGAATAAAGTTCAAAGCCCGAAACCTAGTCAAACATCTGGTGAAAATTATGATACGAAACTGGTTGAAATGATTAACACTGCCATTGTAGATAGAAGTCCTTCTGTTCGATGGGACGATGTTGGTGGCCTGGAAAAGGCAAAGCAAGCTTTAATGGAGATGGTTATTTTGCCAACAAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGACCAGCTAGAGGTTTGCTTCTCTTTGGTCCGCCTGGTAATGGTAAGACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTTTTTAATGTCACGGCAGCTTCCTTGACGTCAAAATGGGTGGGTGAAGCTGAAAAGCTTGTACGGACACTATTCTTGGTAGCTGTATCGAGACAGCCATCTGTAATTTTCATTGATGAGATTGATAGTATAATGTCAACAAGGACGACAAATGAAAATGAGGCCAGCAGACGATTAAAATCTGAATTCCTTATCCAGTTTGATGGGGTGACATCCAATCCTGATGACATTGTGATTGTAATTGGTGCAACCAATAAGCCACAGGAATTGGATGATGCCGTTCTTAGGAGACTGGTTAAGAGAATATATGTACCTTTACCAAATGAAAATGTTAGGAAACTTCTGCTAAAACACAAACTCAAGGGTCAAGCGTTCTCCTTACCTAGTAGAGATCTAGAGATGCTGGTAAAAGAAACCGAAGGATACTCTGGAAGTGATCTGCAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAGCTGGGTTCTAACATTCTCACCGTAAGAGGACTGAGGTATGAGGACTTCAAGAAAGCAATGGCTGTGATCAGACCAAGTTTAAACAAAAGTAAATGGGAAGAGCTTGAGAGATGGAATGAGGAGTTTGGTTCAAATTGA

Protein sequence

>Msa1029210

MSFLQGIIDSFNCVFSPQSSSSSSSSSQTNFSASSMEASPSSPSSSVSNERVAYKLKGYYDLATQEIDKAVRAEEWGLVDDAILHYRNAHRILLEASSTPVPSFITPSEKQKVQSYRQKISKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVLQKNPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFLVAVSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVRGLRYEDFKKAMAVIRPSLNKSKWEELERWNEEFGSN*