Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354350 | YP_009141600.1 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 3.55e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354350 | sp|Q9BBT5|RR4_LOTJA | 95.522 | 201 | 9 | 0 | 1 | 201 | 1 | 201 | 8.95e-140 | 391 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354350 | A0A0F6NLD0 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 1.70e-143 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030710 | Msa1354350 | 0.813628 | 2.324205e-51 | -8.615850e-47 |
| Msa0078110 | Msa1354350 | 0.803341 | 3.651689e-49 | -8.615850e-47 |
| Msa0095150 | Msa1354350 | 0.838621 | 2.579797e-57 | -8.615850e-47 |
| Msa0095170 | Msa1354350 | 0.846091 | 2.700398e-59 | -8.615850e-47 |
| Msa0095190 | Msa1354350 | 0.847491 | 1.118494e-59 | -8.615850e-47 |
| Msa0095210 | Msa1354350 | 0.859115 | 5.170106e-63 | -8.615850e-47 |
| Msa0095290 | Msa1354350 | 0.838974 | 2.090682e-57 | -8.615850e-47 |
| Msa1351380 | Msa1354350 | 0.802486 | 5.483891e-49 | -8.615850e-47 |
| Msa1354320 | Msa1354350 | 0.844084 | 9.413005e-59 | -8.615850e-47 |
| Msa1354330 | Msa1354350 | 0.872239 | 3.705292e-67 | -8.615850e-47 |
| Msa1354340 | Msa1354350 | 0.842029 | 3.318229e-58 | -8.615850e-47 |
| Msa1354350 | Msa1354380 | 0.897194 | 1.780115e-76 | -8.615850e-47 |
| Msa1354350 | Msa1354390 | 0.932287 | 1.067301e-94 | -8.615850e-47 |
| Msa1354350 | Msa1354860 | 0.819399 | 1.185517e-52 | -8.615850e-47 |
| Msa1354350 | Msa1354880 | 0.845380 | 4.209945e-59 | -8.615850e-47 |
| Msa1354350 | Msa1354900 | 0.870089 | 1.898997e-66 | -8.615850e-47 |
| Msa1354350 | Msa1354910 | 0.841340 | 5.041718e-58 | -8.615850e-47 |
| Msa1354350 | Msa1354920 | 0.837666 | 4.542622e-57 | -8.615850e-47 |
| Msa1354350 | Msa1354930 | 0.847064 | 1.465022e-59 | -8.615850e-47 |
| Msa1354350 | Msa1354950 | 0.924535 | 6.186933e-90 | -8.615850e-47 |
| Msa1354350 | Msa1355050 | 0.846923 | 1.600922e-59 | -8.615850e-47 |
| Msa1354350 | Msa1355070 | 0.861993 | 6.942753e-64 | -8.615850e-47 |
| Msa1354350 | Msa1355080 | 0.839633 | 1.410059e-57 | -8.615850e-47 |
| Msa1354350 | Msa1355090 | 0.841600 | 4.306101e-58 | -8.615850e-47 |
| Msa1354350 | Msa1355100 | 0.841543 | 4.458403e-58 | -8.615850e-47 |
| Msa1354350 | Msa1366000 | 0.857372 | 1.706770e-62 | -8.615850e-47 |
| Msa1354350 | Msa1366010 | 0.904894 | 7.610963e-80 | -8.615850e-47 |
| Msa1354350 | Msa1366040 | 0.840687 | 7.484254e-58 | -8.615850e-47 |
| Msa1354350 | Msa1366050 | 0.913136 | 8.725486e-84 | -8.615850e-47 |
| Msa1354350 | Msa1368270 | 0.912855 | 1.206009e-83 | -8.615850e-47 |
| Msa1354350 | Msa1368280 | 0.864827 | 9.189815e-65 | -8.615850e-47 |
| Msa1354350 | Msa1368290 | 0.905326 | 4.832064e-80 | -8.615850e-47 |
| Msa1354350 | Msa1368300 | 0.898118 | 7.253804e-77 | -8.615850e-47 |
| Msa1354350 | Msa1368310 | 0.828239 | 1.003993e-54 | -8.615850e-47 |
| Msa1354350 | Msa1374610 | 0.806357 | 8.554809e-50 | -8.615850e-47 |
| Msa1354350 | Msa1380570 | 0.844977 | 5.409815e-59 | -8.615850e-47 |
| Msa1354350 | Msa1380590 | 0.861987 | 6.971443e-64 | -8.615850e-47 |
| Msa1354350 | Msa1380600 | 0.848592 | 5.554346e-60 | -8.615850e-47 |
| Msa1354350 | Msa1380610 | 0.841617 | 4.262149e-58 | -8.615850e-47 |
| Msa1354350 | Msa1380620 | 0.838710 | 2.446762e-57 | -8.615850e-47 |
| Msa1354350 | Msa1380640 | 0.897560 | 1.249537e-76 | -8.615850e-47 |
| Msa1354350 | Msa1380650 | 0.840332 | 9.266215e-58 | -8.615850e-47 |
| Msa1354350 | Msa1380710 | 0.893899 | 4.087341e-75 | -8.615850e-47 |
| Msa1354350 | Msa1385370 | 0.866030 | 3.840245e-65 | -8.615850e-47 |
| Msa1354350 | Msa1385380 | 0.825390 | 4.812380e-54 | -8.615850e-47 |
| Msa1354350 | Msa1389990 | 0.809240 | 2.086223e-50 | -8.615850e-47 |
| Msa1354350 | Msa1391160 | 0.808915 | 2.449390e-50 | -8.615850e-47 |
| Msa1354350 | Msa1394030 | 0.844826 | 5.944736e-59 | -8.615850e-47 |
| Msa1354350 | Msa1394040 | 0.857945 | 1.154643e-62 | -8.615850e-47 |
| Msa1354350 | Msa1394060 | 0.855679 | 5.365637e-62 | -8.615850e-47 |
| Msa1354350 | Msa1394130 | 0.861350 | 1.091305e-63 | -8.615850e-47 |
| Msa1354350 | Msa1394150 | 0.848231 | 6.993247e-60 | -8.615850e-47 |
| Msa1354350 | Msa1394160 | 0.841882 | 3.629367e-58 | -8.615850e-47 |
| Msa1354350 | Msa1394210 | 0.843646 | 1.233140e-58 | -8.615850e-47 |
| Msa1354350 | Msa1394220 | 0.846427 | 2.187621e-59 | -8.615850e-47 |
| Msa1354350 | Msa1394230 | 0.858217 | 9.585324e-63 | -8.615850e-47 |
| Msa1354350 | Msa1394250 | 0.857688 | 1.376169e-62 | -8.615850e-47 |
| Msa1354350 | Msa1398700 | 0.863336 | 2.676840e-64 | -8.615850e-47 |
| Msa1354350 | Msa1398710 | 0.839930 | 1.179737e-57 | -8.615850e-47 |
| Msa1354350 | Msa1398720 | 0.873283 | 1.658457e-67 | -8.615850e-47 |
| Msa1354350 | Msa1400330 | 0.803499 | 3.385421e-49 | -8.615850e-47 |
| Msa1354350 | Msa1402340 | 0.805066 | 1.597209e-49 | -8.615850e-47 |
| Msa0700430 | Msa1354350 | 0.801231 | 9.927829e-49 | -8.615850e-47 |
| Msa0704750 | Msa1354350 | 0.812946 | 3.282777e-51 | -8.615850e-47 |
| Msa0807840 | Msa1354350 | 0.802635 | 5.109606e-49 | -8.615850e-47 |
| Msa0139800 | Msa1354350 | 0.806999 | 6.261517e-50 | -8.615850e-47 |
| Msa0139810 | Msa1354350 | 0.801217 | 9.992001e-49 | -8.615850e-47 |
| Msa0141090 | Msa1354350 | 0.811645 | 6.311635e-51 | -8.615850e-47 |
| Msa0170550 | Msa1354350 | 0.804040 | 2.614153e-49 | -8.615850e-47 |
| Msa0173880 | Msa1354350 | 0.857107 | 2.043991e-62 | -8.615850e-47 |
| Msa0186750 | Msa1354350 | 0.801964 | 7.023899e-49 | -8.615850e-47 |
| Msa0202640 | Msa1354350 | 0.855205 | 7.372934e-62 | -8.615850e-47 |
| Msa0219820 | Msa1354350 | 0.809057 | 2.284063e-50 | -8.615850e-47 |
| Msa0221840 | Msa1354350 | 0.844312 | 8.172455e-59 | -8.615850e-47 |
| Msa1264300 | Msa1354350 | 0.811792 | 5.862625e-51 | -8.615850e-47 |
| Msa1269400 | Msa1354350 | 0.874011 | 9.425077e-68 | -8.615850e-47 |
| Msa1269410 | Msa1354350 | 0.821157 | 4.687177e-53 | -8.615850e-47 |
| Msa1269420 | Msa1354350 | 0.895503 | 9.012728e-76 | -8.615850e-47 |
| Msa1305090 | Msa1354350 | 0.832046 | 1.181628e-55 | -8.615850e-47 |
| Msa1317340 | Msa1354350 | 0.801404 | 9.148222e-49 | -8.615850e-47 |
| Msa1334350 | Msa1354350 | 0.804253 | 2.360466e-49 | -8.615850e-47 |
| Msa0370210 | Msa1354350 | 0.836675 | 8.141362e-57 | -8.615850e-47 |
| Msa0374840 | Msa1354350 | 0.811767 | 5.937723e-51 | -8.615850e-47 |
| Msa0375100 | Msa1354350 | 0.812293 | 4.560606e-51 | -8.615850e-47 |
| Msa0398630 | Msa1354350 | 0.825194 | 5.355044e-54 | -8.615850e-47 |
| Msa0449920 | Msa1354350 | 0.834703 | 2.571410e-56 | -8.615850e-47 |
| Msa0470330 | Msa1354350 | 0.801875 | 7.324425e-49 | -8.615850e-47 |
| Msa0470850 | Msa1354350 | 0.805185 | 1.508385e-49 | -8.615850e-47 |
| Msa0983680 | Msa1354350 | 0.800099 | 1.689078e-48 | -8.615850e-47 |
| Msa0983700 | Msa1354350 | 0.848560 | 5.670299e-60 | -8.615850e-47 |
| Msa0983720 | Msa1354350 | 0.857256 | 1.847135e-62 | -8.615850e-47 |
| Msa1044520 | Msa1354350 | 0.805965 | 1.034589e-49 | -8.615850e-47 |
| Msa1064410 | Msa1354350 | 0.817381 | 3.396284e-52 | -8.615850e-47 |
| Msa1081950 | Msa1354350 | 0.804477 | 2.119801e-49 | -8.615850e-47 |
| Msa1084630 | Msa1354350 | 0.801096 | 1.057905e-48 | -8.615850e-47 |
| Msa1086050 | Msa1354350 | 0.857593 | 1.468484e-62 | -8.615850e-47 |
| Msa1086070 | Msa1354350 | 0.854891 | 9.098061e-62 | -8.615850e-47 |
| Msa1086080 | Msa1354350 | 0.828919 | 6.879564e-55 | -8.615850e-47 |
| Msa1086090 | Msa1354350 | 0.835705 | 1.435922e-56 | -8.615850e-47 |
| Msa1086100 | Msa1354350 | 0.828098 | 1.085476e-54 | -8.615850e-47 |
| Msa1086140 | Msa1354350 | 0.859971 | 2.857629e-63 | -8.615850e-47 |
| Msa1086150 | Msa1354350 | 0.855885 | 4.672881e-62 | -8.615850e-47 |
| Msa1086180 | Msa1354350 | 0.864461 | 1.196074e-64 | -8.615850e-47 |
| Msa1086190 | Msa1354350 | 0.839919 | 1.188211e-57 | -8.615850e-47 |
| Msa1086200 | Msa1354350 | 0.840114 | 1.056824e-57 | -8.615850e-47 |
| Msa1086210 | Msa1354350 | 0.826603 | 2.477816e-54 | -8.615850e-47 |
| Msa1086250 | Msa1354350 | 0.829146 | 6.058991e-55 | -8.615850e-47 |
| Msa1086260 | Msa1354350 | 0.813379 | 2.636689e-51 | -8.615850e-47 |
| Msa1086270 | Msa1354350 | 0.834022 | 3.810886e-56 | -8.615850e-47 |
| Msa1086280 | Msa1354350 | 0.869039 | 4.174333e-66 | -8.615850e-47 |
| Msa1086300 | Msa1354350 | 0.837236 | 5.854251e-57 | -8.615850e-47 |
| Msa1086360 | Msa1354350 | 0.857977 | 1.129989e-62 | -8.615850e-47 |
| Msa1086380 | Msa1354350 | 0.856691 | 2.710818e-62 | -8.615850e-47 |
| Msa1086430 | Msa1354350 | 0.848846 | 4.724728e-60 | -8.615850e-47 |
| Msa1086450 | Msa1354350 | 0.859447 | 4.109232e-63 | -8.615850e-47 |
| Msa1086470 | Msa1354350 | 0.864813 | 9.279720e-65 | -8.615850e-47 |
| Msa1086550 | Msa1354350 | 0.801971 | 6.998752e-49 | -8.615850e-47 |
| Msa1086660 | Msa1354350 | 0.852171 | 5.499226e-61 | -8.615850e-47 |
| Msa1086860 | Msa1354350 | 0.847670 | 9.985451e-60 | -8.615850e-47 |
| Msa1086880 | Msa1354350 | 0.860174 | 2.482317e-63 | -8.615850e-47 |
| Msa1086890 | Msa1354350 | 0.843672 | 1.212908e-58 | -8.615850e-47 |
| Msa1086900 | Msa1354350 | 0.846103 | 2.679387e-59 | -8.615850e-47 |
| Msa1086910 | Msa1354350 | 0.839469 | 1.555678e-57 | -8.615850e-47 |
| Msa1091700 | Msa1354350 | 0.816574 | 5.155202e-52 | -8.615850e-47 |
| Msa0268170 | Msa1354350 | 0.868966 | 4.406114e-66 | -8.615850e-47 |
| Msa0268190 | Msa1354350 | 0.865393 | 6.099949e-65 | -8.615850e-47 |
| Msa0268350 | Msa1354350 | 0.813644 | 2.305915e-51 | -8.615850e-47 |
| Msa0268370 | Msa1354350 | 0.853429 | 2.404247e-61 | -8.615850e-47 |
| Msa0268390 | Msa1354350 | 0.857519 | 1.544833e-62 | -8.615850e-47 |
| Msa0268400 | Msa1354350 | 0.849232 | 3.689523e-60 | -8.615850e-47 |
| Msa0268410 | Msa1354350 | 0.862661 | 4.327926e-64 | -8.615850e-47 |
| Msa0268430 | Msa1354350 | 0.854855 | 9.321465e-62 | -8.615850e-47 |
| Msa0268530 | Msa1354350 | 0.843501 | 1.347930e-58 | -8.615850e-47 |
| Msa0268550 | Msa1354350 | 0.872082 | 4.178426e-67 | -8.615850e-47 |
| Msa0268560 | Msa1354350 | 0.845825 | 3.188911e-59 | -8.615850e-47 |
| Msa0268570 | Msa1354350 | 0.839051 | 1.997013e-57 | -8.615850e-47 |
| Msa0268580 | Msa1354350 | 0.842605 | 2.335129e-58 | -8.615850e-47 |
| Msa0268610 | Msa1354350 | 0.801632 | 8.215920e-49 | -8.615850e-47 |
| Msa0268630 | Msa1354350 | 0.855209 | 7.355361e-62 | -8.615850e-47 |
| Msa0268640 | Msa1354350 | 0.849109 | 3.992175e-60 | -8.615850e-47 |
| Msa0268660 | Msa1354350 | 0.819666 | 1.030278e-52 | -8.615850e-47 |
| Msa0268720 | Msa1354350 | 0.860262 | 2.335028e-63 | -8.615850e-47 |
| Msa0268740 | Msa1354350 | 0.851171 | 1.055803e-60 | -8.615850e-47 |
| Msa0268750 | Msa1354350 | 0.841232 | 5.381976e-58 | -8.615850e-47 |
| Msa0268760 | Msa1354350 | 0.804751 | 1.858293e-49 | -8.615850e-47 |
| Msa0268830 | Msa1354350 | 0.857124 | 2.021601e-62 | -8.615850e-47 |
| Msa0268840 | Msa1354350 | 0.845574 | 3.730736e-59 | -8.615850e-47 |
| Msa0268860 | Msa1354350 | 0.852810 | 3.614422e-61 | -8.615850e-47 |
| Msa0268920 | Msa1354350 | 0.856318 | 3.488716e-62 | -8.615850e-47 |
| Msa0268940 | Msa1354350 | 0.858171 | 9.893880e-63 | -8.615850e-47 |
| Msa0268950 | Msa1354350 | 0.830148 | 3.457747e-55 | -8.615850e-47 |
| Msa0268960 | Msa1354350 | 0.836574 | 8.641905e-57 | -8.615850e-47 |
| Msa0269040 | Msa1354350 | 0.850825 | 1.321735e-60 | -8.615850e-47 |
| Msa0269050 | Msa1354350 | 0.860668 | 1.759219e-63 | -8.615850e-47 |
| Msa0269070 | Msa1354350 | 0.862257 | 5.760881e-64 | -8.615850e-47 |
| Msa0269090 | Msa1354350 | 0.813235 | 2.837001e-51 | -8.615850e-47 |
| Msa0307490 | Msa1354350 | 0.810548 | 1.091029e-50 | -8.615850e-47 |
| Msa0344180 | Msa1354350 | 0.841885 | 3.622623e-58 | -8.615850e-47 |
| Msa0344190 | Msa1354350 | 0.866059 | 3.758866e-65 | -8.615850e-47 |
| Msa0344210 | Msa1354350 | 0.826418 | 2.742575e-54 | -8.615850e-47 |
| Msa0344260 | Msa1354350 | 0.809118 | 2.216284e-50 | -8.615850e-47 |
| Msa0344280 | Msa1354350 | 0.860121 | 2.576193e-63 | -8.615850e-47 |
| Msa0344300 | Msa1354350 | 0.861716 | 8.435074e-64 | -8.615850e-47 |
| Msa0344310 | Msa1354350 | 0.846202 | 2.519396e-59 | -8.615850e-47 |
| Msa0344330 | Msa1354350 | 0.851407 | 9.055658e-61 | -8.615850e-47 |
| Msa1143120 | Msa1354350 | 0.849935 | 2.349866e-60 | -8.615850e-47 |
| Msa1143130 | Msa1354350 | 0.854194 | 1.447756e-61 | -8.615850e-47 |
| Msa1143160 | Msa1354350 | 0.848021 | 7.990614e-60 | -8.615850e-47 |
| Msa1143170 | Msa1354350 | 0.826070 | 3.318479e-54 | -8.615850e-47 |
| Msa1143180 | Msa1354350 | 0.829809 | 4.181295e-55 | -8.615850e-47 |
| Msa1171640 | Msa1354350 | 0.813445 | 2.550083e-51 | -8.615850e-47 |
| Msa0483990 | Msa1354350 | 0.837311 | 5.601838e-57 | -8.615850e-47 |
| Msa0484040 | Msa1354350 | 0.803727 | 3.036675e-49 | -8.615850e-47 |
| Msa0495270 | Msa1354350 | 0.825058 | 5.764334e-54 | -8.615850e-47 |
| Msa0508620 | Msa1354350 | 0.805708 | 1.171681e-49 | -8.615850e-47 |
| Msa0508660 | Msa1354350 | 0.804717 | 1.889514e-49 | -8.615850e-47 |
| Msa0516340 | Msa1354350 | 0.812886 | 3.383144e-51 | -8.615850e-47 |
| Msa0574230 | Msa1354350 | 0.800043 | 1.734026e-48 | -8.615850e-47 |
| Msa0577140 | Msa1354350 | 0.809789 | 1.590526e-50 | -8.615850e-47 |
| Msa0581090 | Msa1354350 | 0.800108 | 1.682329e-48 | -8.615850e-47 |
| Msa0582510 | Msa1354350 | 0.855984 | 4.371334e-62 | -8.615850e-47 |
| Msa0582520 | Msa1354350 | 0.863818 | 1.897781e-64 | -8.615850e-47 |
| Msa0582540 | Msa1354350 | 0.842031 | 3.313422e-58 | -8.615850e-47 |
| Msa0582590 | Msa1354350 | 0.802921 | 4.460363e-49 | -8.615850e-47 |
| Msa0582610 | Msa1354350 | 0.855152 | 7.641130e-62 | -8.615850e-47 |
| Msa0582630 | Msa1354350 | 0.845719 | 3.407770e-59 | -8.615850e-47 |
| Msa0582640 | Msa1354350 | 0.842496 | 2.496087e-58 | -8.615850e-47 |
| Msa0582650 | Msa1354350 | 0.837622 | 4.661872e-57 | -8.615850e-47 |
| Msa0582660 | Msa1354350 | 0.827927 | 1.193417e-54 | -8.615850e-47 |
| Msa0582690 | Msa1354350 | 0.854607 | 1.099770e-61 | -8.615850e-47 |
| Msa0582700 | Msa1354350 | 0.874262 | 7.749116e-68 | -8.615850e-47 |
| Msa0582720 | Msa1354350 | 0.847166 | 1.372875e-59 | -8.615850e-47 |
| Msa0582730 | Msa1354350 | 0.826159 | 3.161354e-54 | -8.615850e-47 |
| Msa0582750 | Msa1354350 | 0.866583 | 2.564200e-65 | -8.615850e-47 |
| Msa0582760 | Msa1354350 | 0.850286 | 1.872958e-60 | -8.615850e-47 |
| Msa0582770 | Msa1354350 | 0.840469 | 8.534058e-58 | -8.615850e-47 |
| Msa0582780 | Msa1354350 | 0.844538 | 7.105170e-59 | -8.615850e-47 |
| Msa0582810 | Msa1354350 | 0.853186 | 2.822373e-61 | -8.615850e-47 |
| Msa0582820 | Msa1354350 | 0.867883 | 9.850333e-66 | -8.615850e-47 |
| Msa0582840 | Msa1354350 | 0.846510 | 2.075325e-59 | -8.615850e-47 |
| Msa0582890 | Msa1354350 | 0.870971 | 9.745996e-67 | -8.615850e-47 |
| Msa0582910 | Msa1354350 | 0.855753 | 5.107152e-62 | -8.615850e-47 |
| Msa0582920 | Msa1354350 | 0.840828 | 6.874373e-58 | -8.615850e-47 |
| Msa0582930 | Msa1354350 | 0.826926 | 2.074323e-54 | -8.615850e-47 |
| Msa0591370 | Msa1354350 | 0.812913 | 3.336910e-51 | -8.615850e-47 |
| Msa0591380 | Msa1354350 | 0.824505 | 7.784505e-54 | -8.615850e-47 |
| Msa0867640 | Msa1354350 | 0.876587 | 1.239805e-68 | -8.615850e-47 |
| Msa0867650 | Msa1354350 | 0.848852 | 4.706584e-60 | -8.615850e-47 |
| Msa0883880 | Msa1354350 | 0.828721 | 7.679978e-55 | -8.615850e-47 |
| Msa0908480 | Msa1354350 | 0.802815 | 4.690934e-49 | -8.615850e-47 |
| Msa0924830 | Msa1354350 | 0.801777 | 7.672628e-49 | -8.615850e-47 |
| Msa0924850 | Msa1354350 | 0.848214 | 7.069517e-60 | -8.615850e-47 |
| Msa0924870 | Msa1354350 | 0.847377 | 1.202196e-59 | -8.615850e-47 |
| Msa0924880 | Msa1354350 | 0.845668 | 3.518461e-59 | -8.615850e-47 |
| Msa0924990 | Msa1354350 | 0.854675 | 1.050930e-61 | -8.615850e-47 |
| Msa0925040 | Msa1354350 | 0.848971 | 4.361417e-60 | -8.615850e-47 |
| Msa0931070 | Msa1354350 | 0.852921 | 3.360492e-61 | -8.615850e-47 |
| Msa0931080 | Msa1354350 | 0.861270 | 1.154324e-63 | -8.615850e-47 |
| Msa0931100 | Msa1354350 | 0.852747 | 3.769065e-61 | -8.615850e-47 |
| Msa0931110 | Msa1354350 | 0.834277 | 3.290251e-56 | -8.615850e-47 |
| Msa0931130 | Msa1354350 | 0.861720 | 8.412128e-64 | -8.615850e-47 |
| Msa0931140 | Msa1354350 | 0.861045 | 1.351929e-63 | -8.615850e-47 |
| Msa0931160 | Msa1354350 | 0.852666 | 3.975419e-61 | -8.615850e-47 |
| Msa0931190 | Msa1354350 | 0.866047 | 3.793266e-65 | -8.615850e-47 |
| Msa0931210 | Msa1354350 | 0.845716 | 3.414597e-59 | -8.615850e-47 |
| Msa0931220 | Msa1354350 | 0.816638 | 4.988030e-52 | -8.615850e-47 |
| Msa0931230 | Msa1354350 | 0.832770 | 7.821172e-56 | -8.615850e-47 |
| Msa0931240 | Msa1354350 | 0.836857 | 7.319711e-57 | -8.615850e-47 |
| Msa0931260 | Msa1354350 | 0.852888 | 3.434340e-61 | -8.615850e-47 |
| Msa0931270 | Msa1354350 | 0.840643 | 7.682565e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354350 | MtrunA17_Chr7g0229301 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1354350 | MtrunA17_Chr6g0454441 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1354350 | MtrunA17_Chr4g0016451 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1354350 | MtrunA17_Chr6g0466281 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1354350 | MtrunA17_CPg0493311 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1354350 | MtrunA17_Chr7g0229661 | 84.080 | 201 | 13 | 1 | 1 | 201 | 1 | 182 | 1.89e-115 | 327 |
| Msa1354350 | MtrunA17_Chr4g0015291 | 97.436 | 156 | 4 | 0 | 1 | 156 | 1 | 156 | 3.32e-108 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1354350 | ATCG00380.1 | 88.060 | 201 | 24 | 0 | 1 | 201 | 1 | 201 | 2.12e-126 | 355 |
Find 33 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATAATAGATAGTAAA+TGG | 0.189787 | tig0014543:-130715 | Msa1354350:CDS |
| GATTGACTAATCCTTTATAT+TGG | 0.284280 | tig0014543:+130735 | None:intergenic |
| CTTGATCCATTCCAATATAA+AGG | 0.291752 | tig0014543:-130746 | Msa1354350:CDS |
| CTTAAATACGTTCGTATCGC+TGG | 0.342652 | tig0014543:-131046 | Msa1354350:CDS |
| ACAATTACTTGAAATGCGTT+TGG | 0.359489 | tig0014543:-130990 | Msa1354350:CDS |
| TTTGAAAATTAATGAATTGC+TGG | 0.365999 | tig0014543:-130687 | Msa1354350:CDS |
| ATGGATTGGCAATTCTTCGC+GGG | 0.450528 | tig0014543:+130775 | None:intergenic |
| TACCAGGACTAACTAGTAAA+CGG | 0.463029 | tig0014543:-131189 | Msa1354350:CDS |
| TGAGGTTTGCAACGATAACT+TGG | 0.468099 | tig0014543:+130866 | None:intergenic |
| ACTAATCCTTTATATTGGAA+TGG | 0.475526 | tig0014543:+130740 | None:intergenic |
| GTCTGTGGTTAACTAATTGA+CGG | 0.477609 | tig0014543:+130921 | None:intergenic |
| TCAAATAATAGATAGTAAAT+GGG | 0.487910 | tig0014543:-130714 | Msa1354350:CDS |
| ATAATAGATAGTAAATGGGT+TGG | 0.504615 | tig0014543:-130710 | Msa1354350:CDS |
| CTAAGTTCGCTTCCAACTGT+AGG | 0.508663 | tig0014543:+131166 | None:intergenic |
| GGATCAAGAGTCAAATGGAT+TGG | 0.511159 | tig0014543:+130761 | None:intergenic |
| GGAAAAGCGAAAGGTTCAAC+CGG | 0.516182 | tig0014543:-131025 | Msa1354350:CDS |
| TCTGTGGTTAACTAATTGAC+GGG | 0.521261 | tig0014543:+130922 | None:intergenic |
| GGCCGTTTACTAGTTAGTCC+TGG | 0.527000 | tig0014543:+131187 | None:intergenic |
| AATGGATTGGCAATTCTTCG+CGG | 0.545268 | tig0014543:+130774 | None:intergenic |
| TCAAGATATTATTACAGCGA+AGG | 0.559737 | tig0014543:-130846 | Msa1354350:CDS |
| TTCGCTGTAATAATATCTTG+AGG | 0.560954 | tig0014543:+130848 | None:intergenic |
| TAATTGTAGTAAAACTTGAC+CGG | 0.568250 | tig0014543:+131006 | None:intergenic |
| ACTAGTAAACGGCCTACAGT+TGG | 0.568372 | tig0014543:-131178 | Msa1354350:CDS |
| CAAGATATTATTACAGCGAA+GGG | 0.569002 | tig0014543:-130845 | Msa1354350:CDS |
| TTAACTAATTGACGGGCTTG+AGG | 0.581554 | tig0014543:+130929 | None:intergenic |
| GGAATGGATCAAGAGTCAAA+TGG | 0.582974 | tig0014543:+130756 | None:intergenic |
| GATTGGCAATTCTTCGCGGG+GGG | 0.584547 | tig0014543:+130778 | None:intergenic |
| TGGATTGGCAATTCTTCGCG+GGG | 0.610754 | tig0014543:+130776 | None:intergenic |
| TGTTTATGTCACGTTACAGA+GGG | 0.632465 | tig0014543:-131246 | None:intergenic |
| GTGTTTATGTCACGTTACAG+AGG | 0.633128 | tig0014543:-131247 | None:intergenic |
| CGTATCGCTGGAAAAGCGAA+AGG | 0.633501 | tig0014543:-131034 | Msa1354350:CDS |
| CATTAACTAAAACATGTCTG+TGG | 0.663264 | tig0014543:+130906 | None:intergenic |
| GGATTGGCAATTCTTCGCGG+GGG | 0.681198 | tig0014543:+130777 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATAATAGATAGTAAA+TGG | - | tig0014543:131184-131203 | Msa1354350:CDS | 15.0% |
| !! | TCAAATAATAGATAGTAAAT+GGG | - | tig0014543:131185-131204 | Msa1354350:CDS | 15.0% |
| !! | TTTGAAAATTAATGAATTGC+TGG | - | tig0014543:131212-131231 | Msa1354350:CDS | 20.0% |
| !! | CAAAAATTGCGTTTTCATTA+TGG | - | tig0014543:130811-130830 | Msa1354350:CDS | 25.0% |
| ! | TAATTGTAGTAAAACTTGAC+CGG | + | tig0014543:130896-130915 | None:intergenic | 25.0% |
| !!! | GATAACATACTTTTTCGATT+GGG | - | tig0014543:130931-130950 | Msa1354350:CDS | 25.0% |
| ! | ACTAATCCTTTATATTGGAA+TGG | + | tig0014543:131162-131181 | None:intergenic | 25.0% |
| ! | GATTGACTAATCCTTTATAT+TGG | + | tig0014543:131167-131186 | None:intergenic | 25.0% |
| ! | ATAATAGATAGTAAATGGGT+TGG | - | tig0014543:131189-131208 | Msa1354350:CDS | 25.0% |
| TTTCAAAAAAATACGTCGTC+TGG | - | tig0014543:130681-130700 | Msa1354350:CDS | 30.0% | |
| TTCAAAAAAATACGTCGTCT+GGG | - | tig0014543:130682-130701 | Msa1354350:CDS | 30.0% | |
| ACAATTACTTGAAATGCGTT+TGG | - | tig0014543:130909-130928 | Msa1354350:CDS | 30.0% | |
| !!! | GGATAACATACTTTTTCGAT+TGG | - | tig0014543:130930-130949 | Msa1354350:CDS | 30.0% |
| CATTAACTAAAACATGTCTG+TGG | + | tig0014543:130996-131015 | None:intergenic | 30.0% | |
| !!! | CACAGACATGTTTTAGTTAA+TGG | - | tig0014543:130994-131013 | Msa1354350:CDS | 30.0% |
| TTCGCTGTAATAATATCTTG+AGG | + | tig0014543:131054-131073 | None:intergenic | 30.0% | |
| TCAAGATATTATTACAGCGA+AGG | - | tig0014543:131053-131072 | Msa1354350:CDS | 30.0% | |
| CAAGATATTATTACAGCGAA+GGG | - | tig0014543:131054-131073 | Msa1354350:CDS | 30.0% | |
| CTTGATCCATTCCAATATAA+AGG | - | tig0014543:131153-131172 | Msa1354350:CDS | 30.0% | |
| !!! | CGACGTATTTTTTTGAAACG+AGG | + | tig0014543:130679-130698 | None:intergenic | 35.0% |
| TCAAAAAAATACGTCGTCTG+GGG | - | tig0014543:130683-130702 | Msa1354350:CDS | 35.0% | |
| TACCAGGACTAACTAGTAAA+CGG | - | tig0014543:130710-130729 | Msa1354350:CDS | 35.0% | |
| !!! | CATACTTTTTCGATTGGGTA+TGG | - | tig0014543:130936-130955 | Msa1354350:CDS | 35.0% |
| TCTGTGGTTAACTAATTGAC+GGG | + | tig0014543:130980-130999 | None:intergenic | 35.0% | |
| GTCTGTGGTTAACTAATTGA+CGG | + | tig0014543:130981-131000 | None:intergenic | 35.0% | |
| CAAAAAAATACGTCGTCTGG+GGG | - | tig0014543:130684-130703 | Msa1354350:CDS | 40.0% | |
| !!! | ATTTTTTACTCGAGCGCGAT+TGG | + | tig0014543:130762-130781 | None:intergenic | 40.0% |
| CTTAAATACGTTCGTATCGC+TGG | - | tig0014543:130853-130872 | Msa1354350:CDS | 40.0% | |
| !! | TTAACTAATTGACGGGCTTG+AGG | + | tig0014543:130973-130992 | None:intergenic | 40.0% |
| TGAGGTTTGCAACGATAACT+TGG | + | tig0014543:131036-131055 | None:intergenic | 40.0% | |
| !! | AATGGATTGGCAATTCTTCG+CGG | + | tig0014543:131128-131147 | None:intergenic | 40.0% |
| GGATCAAGAGTCAAATGGAT+TGG | + | tig0014543:131141-131160 | None:intergenic | 40.0% | |
| GGAATGGATCAAGAGTCAAA+TGG | + | tig0014543:131146-131165 | None:intergenic | 40.0% | |
| ACTAGTAAACGGCCTACAGT+TGG | - | tig0014543:130721-130740 | Msa1354350:CDS | 45.0% | |
| CTAAGTTCGCTTCCAACTGT+AGG | + | tig0014543:130736-130755 | None:intergenic | 45.0% | |
| GGAAAAGCGAAAGGTTCAAC+CGG | - | tig0014543:130874-130893 | Msa1354350:CDS | 45.0% | |
| !! | ATGGATTGGCAATTCTTCGC+GGG | + | tig0014543:131127-131146 | None:intergenic | 45.0% |
| GGCCGTTTACTAGTTAGTCC+TGG | + | tig0014543:130715-130734 | None:intergenic | 50.0% | |
| CGTATCGCTGGAAAAGCGAA+AGG | - | tig0014543:130865-130884 | Msa1354350:CDS | 50.0% | |
| !! | TGGATTGGCAATTCTTCGCG+GGG | + | tig0014543:131126-131145 | None:intergenic | 50.0% |
| GATTGGCAATTCTTCGCGGG+GGG | + | tig0014543:131124-131143 | None:intergenic | 55.0% | |
| ! | GGATTGGCAATTCTTCGCGG+GGG | + | tig0014543:131125-131144 | None:intergenic | 55.0% |
| CGTCGTCTGGGGGCTTTACC+AGG | - | tig0014543:130694-130713 | Msa1354350:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014543 | gene | 130658 | 131263 | 130658 | ID=Msa1354350;Name=Msa1354350 |
| tig0014543 | mRNA | 130658 | 131263 | 130658 | ID=Msa1354350-mRNA-1;Parent=Msa1354350;Name=Msa1354350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|201 |
| tig0014543 | exon | 130658 | 131263 | 130658 | ID=Msa1354350-mRNA-1:exon:9098;Parent=Msa1354350-mRNA-1 |
| tig0014543 | CDS | 130658 | 131263 | 130658 | ID=Msa1354350-mRNA-1:cds;Parent=Msa1354350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
