Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269420 | YP_009141600.1 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 3.55e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269420 | sp|Q9BBT5|RR4_LOTJA | 95.522 | 201 | 9 | 0 | 1 | 201 | 1 | 201 | 8.95e-140 | 391 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269420 | A0A0F6NLD0 | 100.000 | 201 | 0 | 0 | 1 | 201 | 1 | 201 | 1.70e-143 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030710 | Msa1269420 | 0.825316 | 5.009246e-54 | -8.615850e-47 |
| Msa0095150 | Msa1269420 | 0.812981 | 3.224507e-51 | -8.615850e-47 |
| Msa0095170 | Msa1269420 | 0.828185 | 1.034605e-54 | -8.615850e-47 |
| Msa0095190 | Msa1269420 | 0.848233 | 6.985013e-60 | -8.615850e-47 |
| Msa0095210 | Msa1269420 | 0.834106 | 3.630782e-56 | -8.615850e-47 |
| Msa0095290 | Msa1269420 | 0.845035 | 5.220572e-59 | -8.615850e-47 |
| Msa0102290 | Msa1269420 | 0.803670 | 3.120742e-49 | -8.615850e-47 |
| Msa0704750 | Msa1269420 | 0.809780 | 1.597412e-50 | -8.615850e-47 |
| Msa0707870 | Msa1269420 | 0.816170 | 6.349015e-52 | -8.615850e-47 |
| Msa0724120 | Msa1269420 | 0.800043 | 1.733885e-48 | -8.615850e-47 |
| Msa0727020 | Msa1269420 | 0.822288 | 2.566991e-53 | -8.615850e-47 |
| Msa0807840 | Msa1269420 | 0.809147 | 2.184280e-50 | -8.615850e-47 |
| Msa0139800 | Msa1269420 | 0.807354 | 5.266787e-50 | -8.615850e-47 |
| Msa0141090 | Msa1269420 | 0.812405 | 4.311341e-51 | -8.615850e-47 |
| Msa0147070 | Msa1269420 | 0.815535 | 8.796165e-52 | -8.615850e-47 |
| Msa0170550 | Msa1269420 | 0.810413 | 1.167230e-50 | -8.615850e-47 |
| Msa0173880 | Msa1269420 | 0.829685 | 4.482463e-55 | -8.615850e-47 |
| Msa0181740 | Msa1269420 | 0.801653 | 8.135263e-49 | -8.615850e-47 |
| Msa0186750 | Msa1269420 | 0.803299 | 3.725794e-49 | -8.615850e-47 |
| Msa0202640 | Msa1269420 | 0.831058 | 2.069355e-55 | -8.615850e-47 |
| Msa0221840 | Msa1269420 | 0.842016 | 3.344021e-58 | -8.615850e-47 |
| Msa0225050 | Msa1269420 | 0.817280 | 3.579648e-52 | -8.615850e-47 |
| Msa1236990 | Msa1269420 | 0.803201 | 3.903048e-49 | -8.615850e-47 |
| Msa1263600 | Msa1269420 | 0.800003 | 1.766850e-48 | -8.615850e-47 |
| Msa1264300 | Msa1269420 | 0.806385 | 8.440875e-50 | -8.615850e-47 |
| Msa1267800 | Msa1269420 | 0.828402 | 9.170812e-55 | -8.615850e-47 |
| Msa1269400 | Msa1269420 | 0.918468 | 1.502044e-86 | -8.615850e-47 |
| Msa1269410 | Msa1269420 | 0.834302 | 3.242762e-56 | -8.615850e-47 |
| Msa1269420 | Msa1305090 | 0.821581 | 3.741192e-53 | -8.615850e-47 |
| Msa1269420 | Msa1317340 | 0.809861 | 1.534801e-50 | -8.615850e-47 |
| Msa1269420 | Msa1351380 | 0.800885 | 1.168316e-48 | -8.615850e-47 |
| Msa1269420 | Msa1354320 | 0.848810 | 4.834539e-60 | -8.615850e-47 |
| Msa1269420 | Msa1354330 | 0.825448 | 4.661465e-54 | -8.615850e-47 |
| Msa1269420 | Msa1354340 | 0.841786 | 3.847126e-58 | -8.615850e-47 |
| Msa1269420 | Msa1354350 | 0.895503 | 9.012728e-76 | -8.615850e-47 |
| Msa1269420 | Msa1354380 | 0.906101 | 2.125118e-80 | -8.615850e-47 |
| Msa1269420 | Msa1354390 | 0.875232 | 3.623825e-68 | -8.615850e-47 |
| Msa1269420 | Msa1354880 | 0.814573 | 1.438253e-51 | -8.615850e-47 |
| Msa1269420 | Msa1354900 | 0.860467 | 2.024361e-63 | -8.615850e-47 |
| Msa1269420 | Msa1354910 | 0.819460 | 1.148253e-52 | -8.615850e-47 |
| Msa1269420 | Msa1354920 | 0.813274 | 2.780536e-51 | -8.615850e-47 |
| Msa1269420 | Msa1354930 | 0.833315 | 5.723834e-56 | -8.615850e-47 |
| Msa1269420 | Msa1354950 | 0.879100 | 1.641805e-69 | -8.615850e-47 |
| Msa1269420 | Msa1355050 | 0.827683 | 1.366706e-54 | -8.615850e-47 |
| Msa1269420 | Msa1355070 | 0.855823 | 4.871362e-62 | -8.615850e-47 |
| Msa1269420 | Msa1355080 | 0.817451 | 3.274618e-52 | -8.615850e-47 |
| Msa1269420 | Msa1355090 | 0.813521 | 2.453679e-51 | -8.615850e-47 |
| Msa1269420 | Msa1355100 | 0.836875 | 7.241976e-57 | -8.615850e-47 |
| Msa1269420 | Msa1366000 | 0.839429 | 1.593540e-57 | -8.615850e-47 |
| Msa1269420 | Msa1366010 | 0.879572 | 1.117086e-69 | -8.615850e-47 |
| Msa1269420 | Msa1366040 | 0.844584 | 6.905565e-59 | -8.615850e-47 |
| Msa1269420 | Msa1366050 | 0.873665 | 1.232851e-67 | -8.615850e-47 |
| Msa1269420 | Msa1368270 | 0.876703 | 1.130413e-68 | -8.615850e-47 |
| Msa1269420 | Msa1368280 | 0.856226 | 3.712244e-62 | -8.615850e-47 |
| Msa1269420 | Msa1368290 | 0.874002 | 9.488974e-68 | -8.615850e-47 |
| Msa1269420 | Msa1368300 | 0.869309 | 3.411299e-66 | -8.615850e-47 |
| Msa1269420 | Msa1374610 | 0.812099 | 5.027665e-51 | -8.615850e-47 |
| Msa1269420 | Msa1380570 | 0.816506 | 5.338806e-52 | -8.615850e-47 |
| Msa1269420 | Msa1380590 | 0.849799 | 2.563789e-60 | -8.615850e-47 |
| Msa1269420 | Msa1380600 | 0.837215 | 5.927046e-57 | -8.615850e-47 |
| Msa1269420 | Msa1380610 | 0.828642 | 8.024563e-55 | -8.615850e-47 |
| Msa1269420 | Msa1380620 | 0.814704 | 1.345454e-51 | -8.615850e-47 |
| Msa1269420 | Msa1380640 | 0.888091 | 8.028960e-73 | -8.615850e-47 |
| Msa1269420 | Msa1380650 | 0.822150 | 2.763397e-53 | -8.615850e-47 |
| Msa1269420 | Msa1380710 | 0.871302 | 7.578313e-67 | -8.615850e-47 |
| Msa1269420 | Msa1385370 | 0.836703 | 8.009303e-57 | -8.615850e-47 |
| Msa1269420 | Msa1389990 | 0.824218 | 9.094173e-54 | -8.615850e-47 |
| Msa1269420 | Msa1394030 | 0.820448 | 6.824583e-53 | -8.615850e-47 |
| Msa1269420 | Msa1394040 | 0.845593 | 3.686296e-59 | -8.615850e-47 |
| Msa1269420 | Msa1394060 | 0.844647 | 6.641043e-59 | -8.615850e-47 |
| Msa1269420 | Msa1394130 | 0.844569 | 6.972566e-59 | -8.615850e-47 |
| Msa1269420 | Msa1394150 | 0.839936 | 1.175954e-57 | -8.615850e-47 |
| Msa1269420 | Msa1394160 | 0.825178 | 5.401422e-54 | -8.615850e-47 |
| Msa1269420 | Msa1394170 | 0.804539 | 2.057892e-49 | -8.615850e-47 |
| Msa1269420 | Msa1394210 | 0.829679 | 4.499077e-55 | -8.615850e-47 |
| Msa1269420 | Msa1394220 | 0.845485 | 3.943300e-59 | -8.615850e-47 |
| Msa1269420 | Msa1394230 | 0.855956 | 4.453931e-62 | -8.615850e-47 |
| Msa1269420 | Msa1394250 | 0.844652 | 6.621178e-59 | -8.615850e-47 |
| Msa1269420 | Msa1398700 | 0.871091 | 8.895273e-67 | -8.615850e-47 |
| Msa1269420 | Msa1398710 | 0.824724 | 6.910846e-54 | -8.615850e-47 |
| Msa1269420 | Msa1398720 | 0.891064 | 5.586454e-74 | -8.615850e-47 |
| Msa1269420 | Msa1400330 | 0.821957 | 3.062625e-53 | -8.615850e-47 |
| Msa0370210 | Msa1269420 | 0.831727 | 1.416539e-55 | -8.615850e-47 |
| Msa0374840 | Msa1269420 | 0.811523 | 6.707998e-51 | -8.615850e-47 |
| Msa0375100 | Msa1269420 | 0.813601 | 2.356781e-51 | -8.615850e-47 |
| Msa0398630 | Msa1269420 | 0.826845 | 2.168949e-54 | -8.615850e-47 |
| Msa0449030 | Msa1269420 | 0.800872 | 1.175616e-48 | -8.615850e-47 |
| Msa0449920 | Msa1269420 | 0.821091 | 4.853794e-53 | -8.615850e-47 |
| Msa0470850 | Msa1269420 | 0.805003 | 1.646364e-49 | -8.615850e-47 |
| Msa0983700 | Msa1269420 | 0.827127 | 1.856996e-54 | -8.615850e-47 |
| Msa0983720 | Msa1269420 | 0.839903 | 1.199192e-57 | -8.615850e-47 |
| Msa1044520 | Msa1269420 | 0.802274 | 6.062459e-49 | -8.615850e-47 |
| Msa1064410 | Msa1269420 | 0.816502 | 5.351046e-52 | -8.615850e-47 |
| Msa1081950 | Msa1269420 | 0.805665 | 1.195975e-49 | -8.615850e-47 |
| Msa1084630 | Msa1269420 | 0.819613 | 1.059411e-52 | -8.615850e-47 |
| Msa1086050 | Msa1269420 | 0.842916 | 1.930309e-58 | -8.615850e-47 |
| Msa1086070 | Msa1269420 | 0.852808 | 3.620868e-61 | -8.615850e-47 |
| Msa1086080 | Msa1269420 | 0.808745 | 2.662652e-50 | -8.615850e-47 |
| Msa1086090 | Msa1269420 | 0.823249 | 1.533250e-53 | -8.615850e-47 |
| Msa1086100 | Msa1269420 | 0.831039 | 2.091764e-55 | -8.615850e-47 |
| Msa1086140 | Msa1269420 | 0.838690 | 2.475064e-57 | -8.615850e-47 |
| Msa1086150 | Msa1269420 | 0.862620 | 4.455313e-64 | -8.615850e-47 |
| Msa1086180 | Msa1269420 | 0.854803 | 9.648670e-62 | -8.615850e-47 |
| Msa1086190 | Msa1269420 | 0.815003 | 1.154895e-51 | -8.615850e-47 |
| Msa1086200 | Msa1269420 | 0.822276 | 2.583798e-53 | -8.615850e-47 |
| Msa1086210 | Msa1269420 | 0.827608 | 1.424154e-54 | -8.615850e-47 |
| Msa1086250 | Msa1269420 | 0.809562 | 1.779718e-50 | -8.615850e-47 |
| Msa1086260 | Msa1269420 | 0.812500 | 4.109253e-51 | -8.615850e-47 |
| Msa1086270 | Msa1269420 | 0.844267 | 8.402523e-59 | -8.615850e-47 |
| Msa1086280 | Msa1269420 | 0.858452 | 8.156538e-63 | -8.615850e-47 |
| Msa1086300 | Msa1269420 | 0.834196 | 3.445997e-56 | -8.615850e-47 |
| Msa1086360 | Msa1269420 | 0.834441 | 2.992006e-56 | -8.615850e-47 |
| Msa1086380 | Msa1269420 | 0.848459 | 6.046835e-60 | -8.615850e-47 |
| Msa1086430 | Msa1269420 | 0.828382 | 9.276445e-55 | -8.615850e-47 |
| Msa1086450 | Msa1269420 | 0.847717 | 9.693858e-60 | -8.615850e-47 |
| Msa1086470 | Msa1269420 | 0.846505 | 2.082646e-59 | -8.615850e-47 |
| Msa1086660 | Msa1269420 | 0.839356 | 1.664029e-57 | -8.615850e-47 |
| Msa1086860 | Msa1269420 | 0.834177 | 3.485443e-56 | -8.615850e-47 |
| Msa1086880 | Msa1269420 | 0.854065 | 1.577769e-61 | -8.615850e-47 |
| Msa1086890 | Msa1269420 | 0.825121 | 5.570654e-54 | -8.615850e-47 |
| Msa1086900 | Msa1269420 | 0.819767 | 9.768501e-53 | -8.615850e-47 |
| Msa1086910 | Msa1269420 | 0.829494 | 4.989247e-55 | -8.615850e-47 |
| Msa0268170 | Msa1269420 | 0.855290 | 6.967867e-62 | -8.615850e-47 |
| Msa0268190 | Msa1269420 | 0.837086 | 6.396825e-57 | -8.615850e-47 |
| Msa0268370 | Msa1269420 | 0.830201 | 3.356209e-55 | -8.615850e-47 |
| Msa0268390 | Msa1269420 | 0.857092 | 2.065328e-62 | -8.615850e-47 |
| Msa0268400 | Msa1269420 | 0.852389 | 4.768183e-61 | -8.615850e-47 |
| Msa0268410 | Msa1269420 | 0.852212 | 5.352997e-61 | -8.615850e-47 |
| Msa0268430 | Msa1269420 | 0.827123 | 1.861542e-54 | -8.615850e-47 |
| Msa0268530 | Msa1269420 | 0.837112 | 6.300202e-57 | -8.615850e-47 |
| Msa0268550 | Msa1269420 | 0.864376 | 1.271659e-64 | -8.615850e-47 |
| Msa0268560 | Msa1269420 | 0.835587 | 1.538961e-56 | -8.615850e-47 |
| Msa0268570 | Msa1269420 | 0.813122 | 3.002444e-51 | -8.615850e-47 |
| Msa0268580 | Msa1269420 | 0.829986 | 3.785426e-55 | -8.615850e-47 |
| Msa0268630 | Msa1269420 | 0.849736 | 2.669841e-60 | -8.615850e-47 |
| Msa0268640 | Msa1269420 | 0.849343 | 3.436969e-60 | -8.615850e-47 |
| Msa0268720 | Msa1269420 | 0.852444 | 4.598038e-61 | -8.615850e-47 |
| Msa0268740 | Msa1269420 | 0.850661 | 1.470071e-60 | -8.615850e-47 |
| Msa0268750 | Msa1269420 | 0.824403 | 8.226296e-54 | -8.615850e-47 |
| Msa0268760 | Msa1269420 | 0.821342 | 4.249915e-53 | -8.615850e-47 |
| Msa0268830 | Msa1269420 | 0.832094 | 1.150123e-55 | -8.615850e-47 |
| Msa0268840 | Msa1269420 | 0.846785 | 1.746253e-59 | -8.615850e-47 |
| Msa0268860 | Msa1269420 | 0.829733 | 4.364394e-55 | -8.615850e-47 |
| Msa0268920 | Msa1269420 | 0.844591 | 6.875140e-59 | -8.615850e-47 |
| Msa0268940 | Msa1269420 | 0.856553 | 2.976495e-62 | -8.615850e-47 |
| Msa0268950 | Msa1269420 | 0.832871 | 7.379590e-56 | -8.615850e-47 |
| Msa0268960 | Msa1269420 | 0.838344 | 3.040672e-57 | -8.615850e-47 |
| Msa0269040 | Msa1269420 | 0.832490 | 9.178380e-56 | -8.615850e-47 |
| Msa0269050 | Msa1269420 | 0.858020 | 1.097364e-62 | -8.615850e-47 |
| Msa0269070 | Msa1269420 | 0.833375 | 5.530566e-56 | -8.615850e-47 |
| Msa0307490 | Msa1269420 | 0.809244 | 2.081975e-50 | -8.615850e-47 |
| Msa0344180 | Msa1269420 | 0.837881 | 4.001167e-57 | -8.615850e-47 |
| Msa0344190 | Msa1269420 | 0.850843 | 1.306775e-60 | -8.615850e-47 |
| Msa0344210 | Msa1269420 | 0.832936 | 7.110730e-56 | -8.615850e-47 |
| Msa0344280 | Msa1269420 | 0.826915 | 2.087730e-54 | -8.615850e-47 |
| Msa0344300 | Msa1269420 | 0.856328 | 3.464915e-62 | -8.615850e-47 |
| Msa0344310 | Msa1269420 | 0.822474 | 2.324112e-53 | -8.615850e-47 |
| Msa0344330 | Msa1269420 | 0.823511 | 1.331758e-53 | -8.615850e-47 |
| Msa1127530 | Msa1269420 | 0.800516 | 1.389716e-48 | -8.615850e-47 |
| Msa1143120 | Msa1269420 | 0.839243 | 1.780784e-57 | -8.615850e-47 |
| Msa1143130 | Msa1269420 | 0.843602 | 1.266836e-58 | -8.615850e-47 |
| Msa1143160 | Msa1269420 | 0.840908 | 6.548247e-58 | -8.615850e-47 |
| Msa1143170 | Msa1269420 | 0.806636 | 7.472337e-50 | -8.615850e-47 |
| Msa1143180 | Msa1269420 | 0.831395 | 1.710560e-55 | -8.615850e-47 |
| Msa1171640 | Msa1269420 | 0.807680 | 4.489956e-50 | -8.615850e-47 |
| Msa1182950 | Msa1269420 | 0.804987 | 1.658781e-49 | -8.615850e-47 |
| Msa1199690 | Msa1269420 | 0.802479 | 5.503078e-49 | -8.615850e-47 |
| Msa0483990 | Msa1269420 | 0.807750 | 4.338679e-50 | -8.615850e-47 |
| Msa0495270 | Msa1269420 | 0.827737 | 1.325813e-54 | -8.615850e-47 |
| Msa0508620 | Msa1269420 | 0.805820 | 1.109742e-49 | -8.615850e-47 |
| Msa0508660 | Msa1269420 | 0.805544 | 1.268290e-49 | -8.615850e-47 |
| Msa0516340 | Msa1269420 | 0.804582 | 2.016238e-49 | -8.615850e-47 |
| Msa0571220 | Msa1269420 | 0.816920 | 4.312227e-52 | -8.615850e-47 |
| Msa0574230 | Msa1269420 | 0.808483 | 3.029580e-50 | -8.615850e-47 |
| Msa0576510 | Msa1269420 | 0.813302 | 2.741246e-51 | -8.615850e-47 |
| Msa0577140 | Msa1269420 | 0.809306 | 2.019184e-50 | -8.615850e-47 |
| Msa0582510 | Msa1269420 | 0.847516 | 1.100703e-59 | -8.615850e-47 |
| Msa0582520 | Msa1269420 | 0.856258 | 3.633331e-62 | -8.615850e-47 |
| Msa0582540 | Msa1269420 | 0.831092 | 2.030194e-55 | -8.615850e-47 |
| Msa0582610 | Msa1269420 | 0.829521 | 4.913608e-55 | -8.615850e-47 |
| Msa0582630 | Msa1269420 | 0.845557 | 3.771127e-59 | -8.615850e-47 |
| Msa0582640 | Msa1269420 | 0.817255 | 3.625669e-52 | -8.615850e-47 |
| Msa0582650 | Msa1269420 | 0.821197 | 4.588807e-53 | -8.615850e-47 |
| Msa0582660 | Msa1269420 | 0.843636 | 1.240748e-58 | -8.615850e-47 |
| Msa0582690 | Msa1269420 | 0.834995 | 2.170714e-56 | -8.615850e-47 |
| Msa0582700 | Msa1269420 | 0.862916 | 3.611261e-64 | -8.615850e-47 |
| Msa0582720 | Msa1269420 | 0.846927 | 1.597076e-59 | -8.615850e-47 |
| Msa0582730 | Msa1269420 | 0.806702 | 7.233737e-50 | -8.615850e-47 |
| Msa0582750 | Msa1269420 | 0.857935 | 1.162580e-62 | -8.615850e-47 |
| Msa0582760 | Msa1269420 | 0.833800 | 4.330719e-56 | -8.615850e-47 |
| Msa0582770 | Msa1269420 | 0.816585 | 5.125417e-52 | -8.615850e-47 |
| Msa0582780 | Msa1269420 | 0.824944 | 6.134366e-54 | -8.615850e-47 |
| Msa0582810 | Msa1269420 | 0.833840 | 4.231842e-56 | -8.615850e-47 |
| Msa0582820 | Msa1269420 | 0.862432 | 5.090886e-64 | -8.615850e-47 |
| Msa0582840 | Msa1269420 | 0.831198 | 1.912189e-55 | -8.615850e-47 |
| Msa0582890 | Msa1269420 | 0.828150 | 1.054715e-54 | -8.615850e-47 |
| Msa0582910 | Msa1269420 | 0.847500 | 1.111895e-59 | -8.615850e-47 |
| Msa0582920 | Msa1269420 | 0.822034 | 2.939212e-53 | -8.615850e-47 |
| Msa0582930 | Msa1269420 | 0.826025 | 3.400818e-54 | -8.615850e-47 |
| Msa0591370 | Msa1269420 | 0.824801 | 6.627763e-54 | -8.615850e-47 |
| Msa0591380 | Msa1269420 | 0.813633 | 2.319208e-51 | -8.615850e-47 |
| Msa0867640 | Msa1269420 | 0.878603 | 2.456779e-69 | -8.615850e-47 |
| Msa0867650 | Msa1269420 | 0.855857 | 4.761420e-62 | -8.615850e-47 |
| Msa0880370 | Msa1269420 | 0.805716 | 1.167153e-49 | -8.615850e-47 |
| Msa0883880 | Msa1269420 | 0.813503 | 2.477190e-51 | -8.615850e-47 |
| Msa0924850 | Msa1269420 | 0.825314 | 5.014712e-54 | -8.615850e-47 |
| Msa0924870 | Msa1269420 | 0.838304 | 3.114105e-57 | -8.615850e-47 |
| Msa0924880 | Msa1269420 | 0.822783 | 1.968767e-53 | -8.615850e-47 |
| Msa0924890 | Msa1269420 | 0.805851 | 1.093299e-49 | -8.615850e-47 |
| Msa0924990 | Msa1269420 | 0.833806 | 4.316098e-56 | -8.615850e-47 |
| Msa0925040 | Msa1269420 | 0.849427 | 3.256042e-60 | -8.615850e-47 |
| Msa0931070 | Msa1269420 | 0.837089 | 6.383891e-57 | -8.615850e-47 |
| Msa0931080 | Msa1269420 | 0.845981 | 2.892064e-59 | -8.615850e-47 |
| Msa0931100 | Msa1269420 | 0.836204 | 1.073300e-56 | -8.615850e-47 |
| Msa0931110 | Msa1269420 | 0.809169 | 2.160999e-50 | -8.615850e-47 |
| Msa0931130 | Msa1269420 | 0.837395 | 5.329840e-57 | -8.615850e-47 |
| Msa0931140 | Msa1269420 | 0.845524 | 3.848663e-59 | -8.615850e-47 |
| Msa0931160 | Msa1269420 | 0.821159 | 4.682319e-53 | -8.615850e-47 |
| Msa0931190 | Msa1269420 | 0.845877 | 3.086848e-59 | -8.615850e-47 |
| Msa0931210 | Msa1269420 | 0.849625 | 2.868497e-60 | -8.615850e-47 |
| Msa0931220 | Msa1269420 | 0.817162 | 3.804800e-52 | -8.615850e-47 |
| Msa0931230 | Msa1269420 | 0.822755 | 1.998947e-53 | -8.615850e-47 |
| Msa0931240 | Msa1269420 | 0.839859 | 1.231316e-57 | -8.615850e-47 |
| Msa0931260 | Msa1269420 | 0.830287 | 3.197642e-55 | -8.615850e-47 |
| Msa0931270 | Msa1269420 | 0.825755 | 3.942859e-54 | -8.615850e-47 |
| Msa0940400 | Msa1269420 | 0.807517 | 4.864042e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269420 | MtrunA17_Chr7g0229301 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1269420 | MtrunA17_Chr6g0454441 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1269420 | MtrunA17_Chr4g0016451 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1269420 | MtrunA17_Chr6g0466281 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1269420 | MtrunA17_CPg0493311 | 97.512 | 201 | 5 | 0 | 1 | 201 | 1 | 201 | 1.37e-143 | 398 |
| Msa1269420 | MtrunA17_Chr7g0229661 | 84.080 | 201 | 13 | 1 | 1 | 201 | 1 | 182 | 1.89e-115 | 327 |
| Msa1269420 | MtrunA17_Chr4g0015291 | 97.436 | 156 | 4 | 0 | 1 | 156 | 1 | 156 | 3.32e-108 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269420 | ATCG00380.1 | 88.060 | 201 | 24 | 0 | 1 | 201 | 1 | 201 | 2.12e-126 | 355 |
Find 33 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATAATAGATAGTAAA+TGG | 0.189787 | 8_3:-2642756 | Msa1269420:CDS |
| GATTGACTAATCCTTTATAT+TGG | 0.284280 | 8_3:+2642776 | None:intergenic |
| CTTGATCCATTCCAATATAA+AGG | 0.291752 | 8_3:-2642787 | Msa1269420:CDS |
| CTTAAATACGTTCGTATCGC+TGG | 0.342652 | 8_3:-2643087 | Msa1269420:CDS |
| ACAATTACTTGAAATGCGTT+TGG | 0.359489 | 8_3:-2643031 | Msa1269420:CDS |
| TTTGAAAATTAATGAATTGC+TGG | 0.365999 | 8_3:-2642728 | Msa1269420:CDS |
| ATGGATTGGCAATTCTTCGC+GGG | 0.450528 | 8_3:+2642816 | None:intergenic |
| TACCAGGACTAACTAGTAAA+CGG | 0.463029 | 8_3:-2643230 | Msa1269420:CDS |
| TGAGGTTTGCAACGATAACT+TGG | 0.468099 | 8_3:+2642907 | None:intergenic |
| ACTAATCCTTTATATTGGAA+TGG | 0.475526 | 8_3:+2642781 | None:intergenic |
| GTCTGTGGTTAACTAATTGA+CGG | 0.477609 | 8_3:+2642962 | None:intergenic |
| TCAAATAATAGATAGTAAAT+GGG | 0.487910 | 8_3:-2642755 | Msa1269420:CDS |
| ATAATAGATAGTAAATGGGT+TGG | 0.504615 | 8_3:-2642751 | Msa1269420:CDS |
| CTAAGTTCGCTTCCAACTGT+AGG | 0.508663 | 8_3:+2643207 | None:intergenic |
| GGATCAAGAGTCAAATGGAT+TGG | 0.511159 | 8_3:+2642802 | None:intergenic |
| GGAAAAGCGAAAGGTTCAAC+CGG | 0.516182 | 8_3:-2643066 | Msa1269420:CDS |
| TCTGTGGTTAACTAATTGAC+GGG | 0.521261 | 8_3:+2642963 | None:intergenic |
| GGCCGTTTACTAGTTAGTCC+TGG | 0.527000 | 8_3:+2643228 | None:intergenic |
| AATGGATTGGCAATTCTTCG+CGG | 0.545268 | 8_3:+2642815 | None:intergenic |
| TCAAGATATTATTACAGCGA+AGG | 0.559737 | 8_3:-2642887 | Msa1269420:CDS |
| TTCGCTGTAATAATATCTTG+AGG | 0.560954 | 8_3:+2642889 | None:intergenic |
| TAATTGTAGTAAAACTTGAC+CGG | 0.568250 | 8_3:+2643047 | None:intergenic |
| ACTAGTAAACGGCCTACAGT+TGG | 0.568372 | 8_3:-2643219 | Msa1269420:CDS |
| CAAGATATTATTACAGCGAA+GGG | 0.569002 | 8_3:-2642886 | Msa1269420:CDS |
| TTAACTAATTGACGGGCTTG+AGG | 0.581554 | 8_3:+2642970 | None:intergenic |
| GGAATGGATCAAGAGTCAAA+TGG | 0.582974 | 8_3:+2642797 | None:intergenic |
| GATTGGCAATTCTTCGCGGG+GGG | 0.584547 | 8_3:+2642819 | None:intergenic |
| TGGATTGGCAATTCTTCGCG+GGG | 0.610754 | 8_3:+2642817 | None:intergenic |
| TGTTTATGTCACGTTACAGA+GGG | 0.632465 | 8_3:-2643287 | None:intergenic |
| GTGTTTATGTCACGTTACAG+AGG | 0.633128 | 8_3:-2643288 | None:intergenic |
| CGTATCGCTGGAAAAGCGAA+AGG | 0.633501 | 8_3:-2643075 | Msa1269420:CDS |
| CATTAACTAAAACATGTCTG+TGG | 0.663264 | 8_3:+2642947 | None:intergenic |
| GGATTGGCAATTCTTCGCGG+GGG | 0.681198 | 8_3:+2642818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATAATAGATAGTAAA+TGG | - | chr8_3:2643225-2643244 | Msa1269420:CDS | 15.0% |
| !! | TCAAATAATAGATAGTAAAT+GGG | - | chr8_3:2643226-2643245 | Msa1269420:CDS | 15.0% |
| !! | TTTGAAAATTAATGAATTGC+TGG | - | chr8_3:2643253-2643272 | Msa1269420:CDS | 20.0% |
| !! | CAAAAATTGCGTTTTCATTA+TGG | - | chr8_3:2642852-2642871 | Msa1269420:CDS | 25.0% |
| ! | TAATTGTAGTAAAACTTGAC+CGG | + | chr8_3:2642937-2642956 | None:intergenic | 25.0% |
| !!! | GATAACATACTTTTTCGATT+GGG | - | chr8_3:2642972-2642991 | Msa1269420:CDS | 25.0% |
| ! | ACTAATCCTTTATATTGGAA+TGG | + | chr8_3:2643203-2643222 | None:intergenic | 25.0% |
| ! | GATTGACTAATCCTTTATAT+TGG | + | chr8_3:2643208-2643227 | None:intergenic | 25.0% |
| ! | ATAATAGATAGTAAATGGGT+TGG | - | chr8_3:2643230-2643249 | Msa1269420:CDS | 25.0% |
| TTTCAAAAAAATACGTCGTC+TGG | - | chr8_3:2642722-2642741 | Msa1269420:CDS | 30.0% | |
| TTCAAAAAAATACGTCGTCT+GGG | - | chr8_3:2642723-2642742 | Msa1269420:CDS | 30.0% | |
| ACAATTACTTGAAATGCGTT+TGG | - | chr8_3:2642950-2642969 | Msa1269420:CDS | 30.0% | |
| !!! | GGATAACATACTTTTTCGAT+TGG | - | chr8_3:2642971-2642990 | Msa1269420:CDS | 30.0% |
| CATTAACTAAAACATGTCTG+TGG | + | chr8_3:2643037-2643056 | None:intergenic | 30.0% | |
| !!! | CACAGACATGTTTTAGTTAA+TGG | - | chr8_3:2643035-2643054 | Msa1269420:CDS | 30.0% |
| TTCGCTGTAATAATATCTTG+AGG | + | chr8_3:2643095-2643114 | None:intergenic | 30.0% | |
| TCAAGATATTATTACAGCGA+AGG | - | chr8_3:2643094-2643113 | Msa1269420:CDS | 30.0% | |
| CAAGATATTATTACAGCGAA+GGG | - | chr8_3:2643095-2643114 | Msa1269420:CDS | 30.0% | |
| CTTGATCCATTCCAATATAA+AGG | - | chr8_3:2643194-2643213 | Msa1269420:CDS | 30.0% | |
| !!! | CGACGTATTTTTTTGAAACG+AGG | + | chr8_3:2642720-2642739 | None:intergenic | 35.0% |
| TCAAAAAAATACGTCGTCTG+GGG | - | chr8_3:2642724-2642743 | Msa1269420:CDS | 35.0% | |
| TACCAGGACTAACTAGTAAA+CGG | - | chr8_3:2642751-2642770 | Msa1269420:CDS | 35.0% | |
| !!! | CATACTTTTTCGATTGGGTA+TGG | - | chr8_3:2642977-2642996 | Msa1269420:CDS | 35.0% |
| TCTGTGGTTAACTAATTGAC+GGG | + | chr8_3:2643021-2643040 | None:intergenic | 35.0% | |
| GTCTGTGGTTAACTAATTGA+CGG | + | chr8_3:2643022-2643041 | None:intergenic | 35.0% | |
| CAAAAAAATACGTCGTCTGG+GGG | - | chr8_3:2642725-2642744 | Msa1269420:CDS | 40.0% | |
| !!! | ATTTTTTACTCGAGCGCGAT+TGG | + | chr8_3:2642803-2642822 | None:intergenic | 40.0% |
| CTTAAATACGTTCGTATCGC+TGG | - | chr8_3:2642894-2642913 | Msa1269420:CDS | 40.0% | |
| !! | TTAACTAATTGACGGGCTTG+AGG | + | chr8_3:2643014-2643033 | None:intergenic | 40.0% |
| TGAGGTTTGCAACGATAACT+TGG | + | chr8_3:2643077-2643096 | None:intergenic | 40.0% | |
| !! | AATGGATTGGCAATTCTTCG+CGG | + | chr8_3:2643169-2643188 | None:intergenic | 40.0% |
| GGATCAAGAGTCAAATGGAT+TGG | + | chr8_3:2643182-2643201 | None:intergenic | 40.0% | |
| GGAATGGATCAAGAGTCAAA+TGG | + | chr8_3:2643187-2643206 | None:intergenic | 40.0% | |
| ACTAGTAAACGGCCTACAGT+TGG | - | chr8_3:2642762-2642781 | Msa1269420:CDS | 45.0% | |
| CTAAGTTCGCTTCCAACTGT+AGG | + | chr8_3:2642777-2642796 | None:intergenic | 45.0% | |
| GGAAAAGCGAAAGGTTCAAC+CGG | - | chr8_3:2642915-2642934 | Msa1269420:CDS | 45.0% | |
| !! | ATGGATTGGCAATTCTTCGC+GGG | + | chr8_3:2643168-2643187 | None:intergenic | 45.0% |
| GGCCGTTTACTAGTTAGTCC+TGG | + | chr8_3:2642756-2642775 | None:intergenic | 50.0% | |
| CGTATCGCTGGAAAAGCGAA+AGG | - | chr8_3:2642906-2642925 | Msa1269420:CDS | 50.0% | |
| !! | TGGATTGGCAATTCTTCGCG+GGG | + | chr8_3:2643167-2643186 | None:intergenic | 50.0% |
| GATTGGCAATTCTTCGCGGG+GGG | + | chr8_3:2643165-2643184 | None:intergenic | 55.0% | |
| ! | GGATTGGCAATTCTTCGCGG+GGG | + | chr8_3:2643166-2643185 | None:intergenic | 55.0% |
| CGTCGTCTGGGGGCTTTACC+AGG | - | chr8_3:2642735-2642754 | Msa1269420:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 2642699 | 2643304 | 2642699 | ID=Msa1269420;Name=Msa1269420 |
| chr8_3 | mRNA | 2642699 | 2643304 | 2642699 | ID=Msa1269420-mRNA-1;Parent=Msa1269420;Name=Msa1269420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|201 |
| chr8_3 | exon | 2642699 | 2643304 | 2642699 | ID=Msa1269420-mRNA-1:exon:843;Parent=Msa1269420-mRNA-1 |
| chr8_3 | CDS | 2642699 | 2643304 | 2642699 | ID=Msa1269420-mRNA-1:cds;Parent=Msa1269420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
