AlfalfaGEDB | Msa1388040

M. sativa cultivar zhongmu-4 / Msa1388040

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1388040	XP_013453441.1	92.881	295	18	1	1	292	1	295	7.18e-171	484

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1388040	A0A072UNQ3	92.881	295	18	1	1	292	1	295	3.43e-171	484

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008850	Msa1388040	0.828662	7.937205e-55	-8.615850e-47
Msa0011720	Msa1388040	0.805537	1.272775e-49	-8.615850e-47
Msa0027540	Msa1388040	0.812669	3.774020e-51	-8.615850e-47
Msa0030000	Msa1388040	0.806946	6.426276e-50	-8.615850e-47
Msa0060600	Msa1388040	0.802008	6.877238e-49	-8.615850e-47
Msa0075310	Msa1388040	0.814270	1.678312e-51	-8.615850e-47
Msa0084680	Msa1388040	0.800532	1.378702e-48	-8.615850e-47
Msa0091770	Msa1388040	0.807941	3.952047e-50	-8.615850e-47
Msa0105340	Msa1388040	0.810885	9.226551e-51	-8.615850e-47
Msa1347620	Msa1388040	0.810992	8.746324e-51	-8.615850e-47
Msa1352290	Msa1388040	0.805373	1.377425e-49	-8.615850e-47
Msa1355260	Msa1388040	0.833046	6.676813e-56	-8.615850e-47
Msa1387090	Msa1388040	0.800003	1.767280e-48	-8.615850e-47
Msa1388040	Msa1395570	0.803425	3.508064e-49	-8.615850e-47
Msa1388040	Msa1405180	0.811794	5.858670e-51	-8.615850e-47
Msa1388040	Msa1418200	0.825005	5.932246e-54	-8.615850e-47
Msa1388040	Msa1428420	0.823469	1.362531e-53	-8.615850e-47
Msa1388040	Msa1431000	0.820788	5.699426e-53	-8.615850e-47
Msa1388040	Msa1435470	0.807508	4.885251e-50	-8.615850e-47
Msa1388040	Msa1447560	0.840323	9.318636e-58	-8.615850e-47
Msa1388040	Msa1456810	0.849192	3.785900e-60	-8.615850e-47
Msa1388040	Msa1458920	0.808663	2.772335e-50	-8.615850e-47
Msa1388040	Msa1464560	0.852124	5.670795e-61	-8.615850e-47
Msa0605620	Msa1388040	0.802648	5.076825e-49	-8.615850e-47
Msa0606060	Msa1388040	0.818510	1.887847e-52	-8.615850e-47
Msa0617370	Msa1388040	0.809042	2.300917e-50	-8.615850e-47
Msa0619330	Msa1388040	0.827719	1.339382e-54	-8.615850e-47
Msa0621890	Msa1388040	0.819952	8.863761e-53	-8.615850e-47
Msa0624730	Msa1388040	0.834834	2.382849e-56	-8.615850e-47
Msa0647000	Msa1388040	0.824734	6.875475e-54	-8.615850e-47
Msa0655660	Msa1388040	-0.804754	1.855961e-49	-8.615850e-47
Msa0663090	Msa1388040	0.807844	4.144483e-50	-8.615850e-47
Msa0674220	Msa1388040	0.836989	6.773334e-57	-8.615850e-47
Msa0674300	Msa1388040	0.808269	3.364877e-50	-8.615850e-47
Msa0681890	Msa1388040	0.806864	6.687738e-50	-8.615850e-47
Msa0686610	Msa1388040	0.820766	5.766043e-53	-8.615850e-47
Msa0707780	Msa1388040	0.803667	3.124776e-49	-8.615850e-47
Msa0714600	Msa1388040	0.821840	3.260090e-53	-8.615850e-47
Msa0723140	Msa1388040	0.805785	1.128561e-49	-8.615850e-47
Msa0724050	Msa1388040	0.834269	3.305163e-56	-8.615850e-47
Msa0726610	Msa1388040	0.821991	3.007152e-53	-8.615850e-47
Msa0730180	Msa1388040	0.801996	6.917082e-49	-8.615850e-47
Msa0733000	Msa1388040	0.827265	1.721096e-54	-8.615850e-47
Msa0739570	Msa1388040	0.808643	2.799582e-50	-8.615850e-47
Msa0750380	Msa1388040	0.801943	7.093388e-49	-8.615850e-47
Msa0754860	Msa1388040	0.940218	3.396284e-100	-8.615850e-47
Msa0763880	Msa1388040	0.823733	1.181710e-53	-8.615850e-47
Msa0763910	Msa1388040	0.806086	9.755167e-50	-8.615850e-47
Msa0772150	Msa1388040	0.803095	4.105904e-49	-8.615850e-47
Msa0772210	Msa1388040	0.811373	7.232381e-51	-8.615850e-47
Msa0791070	Msa1388040	0.808782	2.614623e-50	-8.615850e-47
Msa0796590	Msa1388040	0.984450	1.348468e-160	-8.615850e-47
Msa0796810	Msa1388040	0.902919	5.923163e-79	-8.615850e-47
Msa0810020	Msa1388040	0.816293	5.958913e-52	-8.615850e-47
Msa0811510	Msa1388040	0.811100	8.287200e-51	-8.615850e-47
Msa0820670	Msa1388040	0.807907	4.017945e-50	-8.615850e-47
Msa0833940	Msa1388040	0.951612	1.414622e-109	-8.615850e-47
Msa0834130	Msa1388040	0.987131	3.642106e-169	-8.615850e-47
Msa0837990	Msa1388040	0.814159	1.775384e-51	-8.615850e-47
Msa0125230	Msa1388040	0.805945	1.044719e-49	-8.615850e-47
Msa0141670	Msa1388040	0.808094	3.666144e-50	-8.615850e-47
Msa0149500	Msa1388040	0.801251	9.834721e-49	-8.615850e-47
Msa0159750	Msa1388040	0.801888	7.279232e-49	-8.615850e-47
Msa0164360	Msa1388040	0.844758	6.201532e-59	-8.615850e-47
Msa0168100	Msa1388040	0.810017	1.420902e-50	-8.615850e-47
Msa0183610	Msa1388040	0.801260	9.794166e-49	-8.615850e-47
Msa0185480	Msa1388040	0.817930	2.553494e-52	-8.615850e-47
Msa0194570	Msa1388040	0.803423	3.510459e-49	-8.615850e-47
Msa0203640	Msa1388040	0.809923	1.488370e-50	-8.615850e-47
Msa0207000	Msa1388040	0.818949	1.500503e-52	-8.615850e-47
Msa0208520	Msa1388040	0.817967	2.505911e-52	-8.615850e-47
Msa0222070	Msa1388040	0.811669	6.237351e-51	-8.615850e-47
Msa0222120	Msa1388040	0.813386	2.627249e-51	-8.615850e-47
Msa0227290	Msa1388040	0.800269	1.560026e-48	-8.615850e-47
Msa0227500	Msa1388040	0.814557	1.450329e-51	-8.615850e-47
Msa1262310	Msa1388040	0.808617	2.835736e-50	-8.615850e-47
Msa1265960	Msa1388040	0.816323	5.867214e-52	-8.615850e-47
Msa1303780	Msa1388040	0.816415	5.596184e-52	-8.615850e-47
Msa1341930	Msa1388040	0.800933	1.142096e-48	-8.615850e-47
Msa1343820	Msa1388040	0.805951	1.041584e-49	-8.615850e-47
Msa0371610	Msa1388040	0.817955	2.521471e-52	-8.615850e-47
Msa0413740	Msa1388040	0.815357	9.636810e-52	-8.615850e-47
Msa0418000	Msa1388040	0.817427	3.316218e-52	-8.615850e-47
Msa0423360	Msa1388040	-0.800644	1.308181e-48	-8.615850e-47
Msa0427050	Msa1388040	0.808583	2.884447e-50	-8.615850e-47
Msa0458790	Msa1388040	0.809701	1.661485e-50	-8.615850e-47
Msa0480320	Msa1388040	0.802610	5.170884e-49	-8.615850e-47
Msa0482680	Msa1388040	0.809766	1.608708e-50	-8.615850e-47
Msa0988480	Msa1388040	0.804188	2.435765e-49	-8.615850e-47
Msa0990520	Msa1388040	0.808941	2.418013e-50	-8.615850e-47
Msa1038320	Msa1388040	0.848664	5.306920e-60	-8.615850e-47
Msa1044040	Msa1388040	0.802376	5.777253e-49	-8.615850e-47
Msa1072350	Msa1388040	0.815472	9.084949e-52	-8.615850e-47
Msa1089530	Msa1388040	0.815104	1.096794e-51	-8.615850e-47
Msa1098560	Msa1388040	0.803359	3.619846e-49	-8.615850e-47
Msa0240780	Msa1388040	0.800452	1.431721e-48	-8.615850e-47
Msa0252180	Msa1388040	0.842397	2.651280e-58	-8.615850e-47
Msa0263620	Msa1388040	0.809904	1.502499e-50	-8.615850e-47
Msa0269360	Msa1388040	0.808009	3.823335e-50	-8.615850e-47
Msa0278620	Msa1388040	0.823193	1.580242e-53	-8.615850e-47
Msa0288240	Msa1388040	0.805728	1.160630e-49	-8.615850e-47
Msa0288330	Msa1388040	0.802635	5.109429e-49	-8.615850e-47
Msa0296760	Msa1388040	0.807114	5.921007e-50	-8.615850e-47
Msa0298940	Msa1388040	0.814635	1.393284e-51	-8.615850e-47
Msa0298970	Msa1388040	0.812565	3.976776e-51	-8.615850e-47
Msa0301180	Msa1388040	0.822244	2.627100e-53	-8.615850e-47
Msa0306130	Msa1388040	0.819928	8.977412e-53	-8.615850e-47
Msa0318000	Msa1388040	0.827334	1.656734e-54	-8.615850e-47
Msa0320540	Msa1388040	0.813881	2.045361e-51	-8.615850e-47
Msa0323630	Msa1388040	0.800796	1.218492e-48	-8.615850e-47
Msa0330270	Msa1388040	0.817160	3.808121e-52	-8.615850e-47
Msa0331780	Msa1388040	0.801517	8.675478e-49	-8.615850e-47
Msa0336270	Msa1388040	0.819917	9.027217e-53	-8.615850e-47
Msa0342200	Msa1388040	0.812753	3.616903e-51	-8.615850e-47
Msa0344070	Msa1388040	0.801556	8.514383e-49	-8.615850e-47
Msa0357380	Msa1388040	0.805650	1.205153e-49	-8.615850e-47
Msa0357390	Msa1388040	0.801778	7.666739e-49	-8.615850e-47
Msa1118140	Msa1388040	0.822895	1.854602e-53	-8.615850e-47
Msa1122510	Msa1388040	0.805127	1.550717e-49	-8.615850e-47
Msa1140010	Msa1388040	0.810169	1.317721e-50	-8.615850e-47
Msa1157160	Msa1388040	0.809272	2.054001e-50	-8.615850e-47
Msa1172590	Msa1388040	0.815644	8.318890e-52	-8.615850e-47
Msa1204120	Msa1388040	0.815601	8.502791e-52	-8.615850e-47
Msa1210770	Msa1388040	0.804999	1.649601e-49	-8.615850e-47
Msa1220230	Msa1388040	0.804345	2.258406e-49	-8.615850e-47
Msa0505390	Msa1388040	0.815484	9.028300e-52	-8.615850e-47
Msa0505660	Msa1388040	0.815483	9.033270e-52	-8.615850e-47
Msa0524050	Msa1388040	0.838275	3.167710e-57	-8.615850e-47
Msa0524090	Msa1388040	0.815567	8.652977e-52	-8.615850e-47
Msa0524120	Msa1388040	0.846829	1.698773e-59	-8.615850e-47
Msa0535450	Msa1388040	0.815586	8.569567e-52	-8.615850e-47
Msa0540320	Msa1388040	0.833013	6.804694e-56	-8.615850e-47
Msa0546740	Msa1388040	0.802500	5.447218e-49	-8.615850e-47
Msa0576420	Msa1388040	0.805580	1.246668e-49	-8.615850e-47
Msa0582110	Msa1388040	0.836308	1.009538e-56	-8.615850e-47
Msa0596100	Msa1388040	0.824180	9.278835e-54	-8.615850e-47
Msa0598250	Msa1388040	0.822896	1.853188e-53	-8.615850e-47
Msa0845590	Msa1388040	-0.803998	2.667818e-49	-8.615850e-47
Msa0847200	Msa1388040	0.802070	6.677737e-49	-8.615850e-47
Msa0851740	Msa1388040	0.815286	9.993419e-52	-8.615850e-47
Msa0860270	Msa1388040	0.817678	2.911953e-52	-8.615850e-47
Msa0886980	Msa1388040	0.816165	6.365746e-52	-8.615850e-47
Msa0903730	Msa1388040	0.803197	3.910634e-49	-8.615850e-47
Msa0937940	Msa1388040	0.806320	8.711294e-50	-8.615850e-47
Msa0951710	Msa1388040	0.804997	1.650989e-49	-8.615850e-47
Msa0952950	Msa1388040	0.802466	5.536027e-49	-8.615850e-47
Msa0952990	Msa1388040	0.811556	6.599326e-51	-8.615850e-47
Msa0973230	Msa1388040	0.816806	4.573148e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1388040	MtrunA17_Chr5g0399691	93.040	273	16	1	1	270	1	273	2.82e-157	440

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1388040	AT4G17540.1	45.714	280	123	5	10	285	28	282	3.96e-65	206

Find 101 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCCATTTACTTTGAAATT+TGG	0.141463	tig0021032:-83679	Msa1388040:CDS
TGTCCAAATTTCAAAGTAAA+TGG	0.158302	tig0021032:+83676	None:intergenic
GCATTAGATGACAGGTATTT+AGG	0.201098	tig0021032:-79994	Msa1388040:three_prime_UTR
GTTGGAAGCCCTTTAAATTT+AGG	0.210875	tig0021032:-83610	Msa1388040:intron
GGACAAGTATTTACTGGTTT+TGG	0.211578	tig0021032:-83658	Msa1388040:CDS
TAAGGGAGATCTCACGGTTT+AGG	0.233689	tig0021032:+80134	None:intergenic
GCTTGCACGTTATCGCTTAA+AGG	0.246676	tig0021032:-80163	Msa1388040:three_prime_UTR
AGAGTAGTACCTAAATTTAA+AGG	0.274370	tig0021032:+83601	None:intergenic
CCTATACTATATCCTGTAAT+TGG	0.287565	tig0021032:+80061	None:intergenic
AAGGGAGATCTCACGGTTTA+GGG	0.290126	tig0021032:+80135	None:intergenic
ATGGGTTACTTACCAATTAC+AGG	0.311687	tig0021032:-80073	Msa1388040:three_prime_UTR
CAGTCTGAGAAATTTGATTC+TGG	0.317467	tig0021032:-83871	None:intergenic
GCCACAGGTGCAGTCAGTTC+TGG	0.319464	tig0021032:-82116	Msa1388040:CDS
TTCATATAGTTGAGGAAGAT+TGG	0.320215	tig0021032:-83205	Msa1388040:intron
AAATTTGGACAAGTATTTAC+TGG	0.322518	tig0021032:-83664	Msa1388040:CDS
CAAGTTCTTCAATCATTTGC+TGG	0.323313	tig0021032:+80370	None:intergenic
CTACAAGTTGCCCCTGCTAA+TGG	0.340138	tig0021032:-80092	Msa1388040:three_prime_UTR
GTTGGATGTGGAGTTGGTTT+CGG	0.345001	tig0021032:-83160	Msa1388040:CDS
CTTGCACGTTATCGCTTAAA+GGG	0.350496	tig0021032:-80162	Msa1388040:three_prime_UTR
ACAAAGATGATGATGAAGTT+TGG	0.354809	tig0021032:-82194	Msa1388040:CDS
ACCCGGATTAAACGGTAAAC+TGG	0.357165	tig0021032:+82163	None:intergenic
AGAACTAGCTTCAAGTTTGC+TGG	0.358017	tig0021032:+80293	None:intergenic
TCCCAGTTTACCGTTTAATC+CGG	0.367717	tig0021032:-82165	Msa1388040:CDS
TACAAGTTGCCCCTGCTAAT+GGG	0.377837	tig0021032:-80091	Msa1388040:three_prime_UTR
TTGGTTGGAGAGGAGTAAAA+TGG	0.387600	tig0021032:-79888	Msa1388040:three_prime_UTR
AAACTTGAAGCTAGTTCTTC+AGG	0.400339	tig0021032:-80288	Msa1388040:CDS
TCAACCAATGAACATTGGTT+TGG	0.414979	tig0021032:-82033	Msa1388040:CDS
TACATGGGCAAGGGTCTGTT+TGG	0.419304	tig0021032:-79907	Msa1388040:three_prime_UTR
TCTGCAAAATCCACTGTTGA+AGG	0.419732	tig0021032:-81931	Msa1388040:CDS
AAAGCCAAACCAATGTTCAT+TGG	0.422194	tig0021032:+82029	None:intergenic
TGCACCTGTGGCACTTTGTA+AGG	0.422373	tig0021032:+82127	None:intergenic
GAGTAGTACCTAAATTTAAA+GGG	0.424503	tig0021032:+83602	None:intergenic
GTGGGTGTTGGATGTGGAGT+TGG	0.433318	tig0021032:-83166	Msa1388040:CDS
GGCAATGCACCCGGATTAAA+CGG	0.440473	tig0021032:+82155	None:intergenic
CATTAGCAGGGGCAACTTGT+AGG	0.443920	tig0021032:+80093	None:intergenic
ATCAAGTTATGAGTGCTACT+AGG	0.451482	tig0021032:-83349	Msa1388040:CDS
TTTGGAATCGGTTGTGGAGT+TGG	0.458433	tig0021032:-83640	Msa1388040:CDS
ATGAGAGCTTACTGATTCGC+TGG	0.460415	tig0021032:+81893	None:intergenic
TCAAGTTATGAGTGCTACTA+GGG	0.471040	tig0021032:-83348	Msa1388040:CDS
TTGGTAAGTAACCCATTAGC+AGG	0.472572	tig0021032:+80080	None:intergenic
TGTGGAGTTGGTTTCGGTCA+TGG	0.472934	tig0021032:-83154	Msa1388040:CDS
ACAGGACTTGCTGTGAAACC+TGG	0.477065	tig0021032:-82343	Msa1388040:intron
CCAATTACAGGATATAGTAT+AGG	0.478483	tig0021032:-80061	Msa1388040:three_prime_UTR
GAATCAATGGAAGCAATTGT+TGG	0.479648	tig0021032:+83842	None:intergenic
GTTGGTTTCGGTCATGGTGT+TGG	0.481887	tig0021032:-83148	Msa1388040:CDS
ATTGAAGTGGGTGTTGGATG+TGG	0.485704	tig0021032:-83172	Msa1388040:CDS
TGGAGGAAAATGAGAAGCTT+CGG	0.486885	tig0021032:-80347	Msa1388040:CDS
GCGGTTACAGCTTGAATCAA+TGG	0.487029	tig0021032:+83829	None:intergenic
CCTCCTTCTCCCTTCAACAG+TGG	0.488432	tig0021032:+81921	None:intergenic
TGGGCAAGGGTCTGTTTGGT+TGG	0.489899	tig0021032:-79903	Msa1388040:three_prime_UTR
AAAAGATAAGAGTAGTATTG+AGG	0.494638	tig0021032:-83742	Msa1388040:five_prime_UTR
AAGGGTCTGTTTGGTTGGAG+AGG	0.496557	tig0021032:-79898	Msa1388040:three_prime_UTR
ACTTCAGCCGACTCTACATA+TGG	0.500649	tig0021032:-81984	Msa1388040:CDS
TGTGGAGTTGGTATCGGTGT+TGG	0.502325	tig0021032:-83628	Msa1388040:CDS
TTCGGTCATGGTGTTGGAGT+TGG	0.502955	tig0021032:-83142	Msa1388040:intron
CCCAGTTTACCGTTTAATCC+GGG	0.504429	tig0021032:-82164	Msa1388040:CDS
TGAATTTGATTCAACACCCC+AGG	0.508485	tig0021032:+82325	None:intergenic
ACTAATTAGCATTAGATGAC+AGG	0.510013	tig0021032:-80002	Msa1388040:three_prime_UTR
AAGAAAACAAAGAAGAAAGT+AGG	0.525920	tig0021032:-80220	Msa1388040:exon
CACTCAAAACAATCAGTACA+TGG	0.527145	tig0021032:+80246	None:intergenic
CTGCAAAATCCACTGTTGAA+GGG	0.528070	tig0021032:-81930	Msa1388040:CDS
AAGAATATTGAAGTGGGTGT+TGG	0.528611	tig0021032:-83178	Msa1388040:CDS
ATCGGTTGTGGAGTTGGTAT+CGG	0.538819	tig0021032:-83634	Msa1388040:CDS
ATAAGAGTAGTATTGAGGAA+TGG	0.547460	tig0021032:-83737	Msa1388040:exon
AGATGACAGGTATTTAGGAA+TGG	0.555064	tig0021032:-79989	Msa1388040:three_prime_UTR
CCCGGATTAAACGGTAAACT+GGG	0.556288	tig0021032:+82164	None:intergenic
GCAAATGATTGAAGAACTTG+TGG	0.559081	tig0021032:-80367	Msa1388040:CDS
AAGGATGCTGGCAATGCACC+CGG	0.560291	tig0021032:+82146	None:intergenic
CAGGACTTGCTGTGAAACCT+GGG	0.561209	tig0021032:-82342	Msa1388040:CDS
AGAGAACAAAATACTTCAGA+TGG	0.561726	tig0021032:-80541	Msa1388040:intron
ATAATATAGTAAAAGATACA+TGG	0.562231	tig0021032:-79923	Msa1388040:three_prime_UTR
TAGTAAAAGATACATGGGCA+AGG	0.571477	tig0021032:-79917	Msa1388040:three_prime_UTR
TCCAGAACTGACTGCACCTG+TGG	0.578803	tig0021032:+82115	None:intergenic
TGGTAAGTAACCCATTAGCA+GGG	0.583261	tig0021032:+80081	None:intergenic
CTAGCTTCAAGTTTGCTGGA+TGG	0.583563	tig0021032:+80297	None:intergenic
TGAGAGCTTACTGATTCGCT+GGG	0.586043	tig0021032:+81894	None:intergenic
GTGGCACTTTGTAAGGATGC+TGG	0.588800	tig0021032:+82134	None:intergenic
AATCCACTGTTGAAGGGAGA+AGG	0.589188	tig0021032:-81924	Msa1388040:CDS
GCATCCTTACAAAGTGCCAC+AGG	0.589278	tig0021032:-82131	Msa1388040:CDS
TCAGCTGATCAGTTATCTCA+AGG	0.590242	tig0021032:-82068	Msa1388040:intron
GTTGGAGAGGAGTAAAATGG+AGG	0.596132	tig0021032:-79885	None:intergenic
ATATGGCAGTCGAACTGAGA+AGG	0.597072	tig0021032:-81967	Msa1388040:CDS
TGGAGCTAAGAATATTGAAG+TGG	0.597204	tig0021032:-83185	Msa1388040:CDS
CCACTGTTGAAGGGAGAAGG+AGG	0.603974	tig0021032:-81921	Msa1388040:CDS
GGAGCTAAGAATATTGAAGT+GGG	0.605534	tig0021032:-83184	Msa1388040:CDS
AGTAAAAGATACATGGGCAA+GGG	0.606431	tig0021032:-79916	Msa1388040:three_prime_UTR
AATGATTGAAGAACTTGTGG+AGG	0.616671	tig0021032:-80364	Msa1388040:CDS
TAATATAGTAAAAGATACAT+GGG	0.620520	tig0021032:-79922	Msa1388040:three_prime_UTR
CTGTTGAAGGGAGAAGGAGG+AGG	0.623525	tig0021032:-81918	Msa1388040:CDS
TCGACTGCCATATGTAGAGT+CGG	0.624499	tig0021032:+81977	None:intergenic
GGGTCTCAACCAATGAACAT+TGG	0.632984	tig0021032:-82038	Msa1388040:CDS
GCTTCGGCAGATACTAGTGA+AGG	0.640377	tig0021032:-80331	Msa1388040:CDS
TGTTGCAGTGAGTTGAGTTG+AGG	0.643118	tig0021032:+83784	None:intergenic
CTCATAACTTGATTCAACAT+CGG	0.655826	tig0021032:+83359	None:intergenic
TTGCACGTTATCGCTTAAAG+GGG	0.660290	tig0021032:-80161	Msa1388040:three_prime_UTR
AGGGAGATCTCACGGTTTAG+GGG	0.678296	tig0021032:+80136	None:intergenic
GGTAAGTAACCCATTAGCAG+GGG	0.690059	tig0021032:+80082	None:intergenic
AGGACTTGCTGTGAAACCTG+GGG	0.707838	tig0021032:-82341	Msa1388040:CDS
CAAGTTATGAGTGCTACTAG+GGG	0.719794	tig0021032:-83347	Msa1388040:CDS
ATCGTATTCGTAGAACGTGG+CGG	0.735634	tig0021032:+83810	None:intergenic
AGCATCGTATTCGTAGAACG+TGG	0.739027	tig0021032:+83807	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATATATATATATATATAT+TGG	+	tig0021032:83045-83064	None:intergenic	0.0%
!!	AAAAAAAAAAAAAGTGAAAA+AGG	+	tig0021032:80284-80303	None:intergenic	10.0%
!!!	AATTTTACAAAATACTATTT+TGG	+	tig0021032:82276-82295	None:intergenic	10.0%
!!!	TATTGTTATTTTTTTCAAAA+CGG	-	tig0021032:82445-82464	Msa1388040:intron	10.0%
!!!	ATTATTTCTTAATTTTTCTT+GGG	+	tig0021032:83806-83825	None:intergenic	10.0%
!!!	TATTATTTCTTAATTTTTCT+TGG	+	tig0021032:83807-83826	None:intergenic	10.0%
!!!	TAACTTTAAAAAGTGTATTT+AGG	-	tig0021032:80696-80715	Msa1388040:intron	15.0%
!!!	AACTTTAAAAAGTGTATTTA+GGG	-	tig0021032:80697-80716	Msa1388040:intron	15.0%
!!!	TTTTGAATTATTGATCATTT+AGG	-	tig0021032:80723-80742	Msa1388040:intron	15.0%
!!!	TTTTCTTTTATTATTATGAC+AGG	-	tig0021032:81383-81402	Msa1388040:intron	15.0%
!!!	TTGTTTCTTTATATACTTTT+TGG	-	tig0021032:82890-82909	Msa1388040:intron	15.0%
!!!	TGTTTATTTATTTTTTCCTA+TGG	-	tig0021032:83334-83353	Msa1388040:CDS	15.0%
!!	ATAATATAGTAAAAGATACA+TGG	-	tig0021032:83821-83840	Msa1388040:five_prime_UTR	15.0%
!!	TAATATAGTAAAAGATACAT+GGG	-	tig0021032:83822-83841	Msa1388040:five_prime_UTR	15.0%
!!!	AATCCATTTACTTTGAAATT+TGG	-	tig0021032:80065-80084	Msa1388040:three_prime_UTR	20.0%
!!!	CGAATTTTTTTAGATCATTT+AGG	-	tig0021032:80776-80795	Msa1388040:intron	20.0%
!!!	CATAATATTGAAAATTTTCC+AGG	-	tig0021032:80808-80827	Msa1388040:intron	20.0%
!!!	TCTATTCATGAGTTTTTTTT+GGG	+	tig0021032:82299-82318	None:intergenic	20.0%
!!!	ATCTATTCATGAGTTTTTTT+TGG	+	tig0021032:82300-82319	None:intergenic	20.0%
!!	TTTCAAATATCACATTTGTT+TGG	-	tig0021032:82651-82670	Msa1388040:intron	20.0%
!!!	TTATTTTTTCCTATGGTTAT+AGG	-	tig0021032:83341-83360	Msa1388040:CDS	20.0%
!	AAAAGATAAGAGTAGTATTG+AGG	-	tig0021032:80002-80021	Msa1388040:three_prime_UTR	25.0%
!	TGTCCAAATTTCAAAGTAAA+TGG	+	tig0021032:80071-80090	None:intergenic	25.0%
!	AAATTTGGACAAGTATTTAC+TGG	-	tig0021032:80080-80099	Msa1388040:three_prime_UTR	25.0%
!	GAGTAGTACCTAAATTTAAA+GGG	+	tig0021032:80145-80164	None:intergenic	25.0%
!	AGAGTAGTACCTAAATTTAA+AGG	+	tig0021032:80146-80165	None:intergenic	25.0%
!	AATCCATAGTAATGTGAAAT+TGG	+	tig0021032:80191-80210	None:intergenic	25.0%
!	TTTCACATTACTATGGATTT+CGG	-	tig0021032:80192-80211	Msa1388040:three_prime_UTR	25.0%
!	AAAAGGTAATAAGAGATACA+TGG	+	tig0021032:80267-80286	None:intergenic	25.0%
!!!	TCTTATTCTGAATTTGTTGT+AGG	-	tig0021032:80355-80374	Msa1388040:CDS	25.0%
!!!	ACTTGTTTTTCATATAGTTG+AGG	-	tig0021032:80531-80550	Msa1388040:intron	25.0%
!	TGAATTATTGATCATTTAGG+AGG	-	tig0021032:80726-80745	Msa1388040:intron	25.0%
!!	AATATTGAAAATTTTCCAGG+AGG	-	tig0021032:80811-80830	Msa1388040:intron	25.0%
!	ATCTATGATCTATAATACAC+AGG	+	tig0021032:80871-80890	None:intergenic	25.0%
!	ATAACAGTTCATAAAGCATA+AGG	-	tig0021032:80960-80979	Msa1388040:intron	25.0%
!	TAACAGTTCATAAAGCATAA+GGG	-	tig0021032:80961-80980	Msa1388040:intron	25.0%
!!!	GTTTTTTAATATACAGTTCG+AGG	+	tig0021032:81082-81101	None:intergenic	25.0%
!	AAAGAAAATATGGAAAGGAT+GGG	+	tig0021032:81273-81292	None:intergenic	25.0%
!	TAAAGAAAATATGGAAAGGA+TGG	+	tig0021032:81274-81293	None:intergenic	25.0%
!	ATGAAGTGGTAAAGAAAATA+TGG	+	tig0021032:81283-81302	None:intergenic	25.0%
!!	ATTTTCTTTACCACTTCATA+TGG	-	tig0021032:81284-81303	Msa1388040:intron	25.0%
!!	TTTTCTTTACCACTTCATAT+GGG	-	tig0021032:81285-81304	Msa1388040:intron	25.0%
!	TTAAACATGAGATACACAAA+AGG	+	tig0021032:81505-81524	None:intergenic	25.0%
!	TAAAAAATCCTCATTCCAAA+TGG	+	tig0021032:82090-82109	None:intergenic	25.0%
!!!	ATTTGGAATGAGGATTTTTT+AGG	-	tig0021032:82089-82108	Msa1388040:CDS	25.0%
!!!	TTTGGAATGAGGATTTTTTA+GGG	-	tig0021032:82090-82109	Msa1388040:CDS	25.0%
!	AAAAACTCATGAATAGATGT+TGG	-	tig0021032:82302-82321	Msa1388040:intron	25.0%
!	AAAACTCATGAATAGATGTT+GGG	-	tig0021032:82303-82322	Msa1388040:intron	25.0%
!!	TTAAATTTTCTTGAGACAGA+GGG	+	tig0021032:82692-82711	None:intergenic	25.0%
!	CTCAAGAAAATTTAAGTACA+AGG	-	tig0021032:82697-82716	Msa1388040:intron	25.0%
!!	TGATATTTAAGATACATTGC+AGG	-	tig0021032:83164-83183	Msa1388040:CDS	25.0%
!	AAGAAAACAAAGAAGAAAGT+AGG	-	tig0021032:83524-83543	Msa1388040:intron	25.0%
!!!	AGATCTCCCTTAATTTTTTT+GGG	-	tig0021032:83621-83640	Msa1388040:CDS	25.0%
!	ACAAGACCCAAAAAAATTAA+GGG	+	tig0021032:83630-83649	None:intergenic	25.0%
!	AACAAGACCCAAAAAAATTA+AGG	+	tig0021032:83631-83650	None:intergenic	25.0%
!	ATAAGAGTAGTATTGAGGAA+TGG	-	tig0021032:80007-80026	Msa1388040:three_prime_UTR	30.0%
	GGAATGGAAAACAAAAATGA+AGG	-	tig0021032:80023-80042	Msa1388040:three_prime_UTR	30.0%
!!!	GTATTTACTGGTTTTGGAAT+CGG	-	tig0021032:80092-80111	Msa1388040:three_prime_UTR	30.0%
	AATTGGAAGAGAATAAGGAA+GGG	+	tig0021032:80174-80193	None:intergenic	30.0%
	AAATTGGAAGAGAATAAGGA+AGG	+	tig0021032:80175-80194	None:intergenic	30.0%
	TGTGAAATTGGAAGAGAATA+AGG	+	tig0021032:80179-80198	None:intergenic	30.0%
	CTTCCAATTTCACATTACTA+TGG	-	tig0021032:80185-80204	Msa1388040:three_prime_UTR	30.0%
!!!	TTTTTGAGTAGGGGAATTTT+GGG	+	tig0021032:80244-80263	None:intergenic	30.0%
!!!	AGATACATGGTTTTTGAGTA+GGG	+	tig0021032:80254-80273	None:intergenic	30.0%
	CTCATAACTTGATTCAACAT+CGG	+	tig0021032:80388-80407	None:intergenic	30.0%
	TTCATATAGTTGAGGAAGAT+TGG	-	tig0021032:80539-80558	Msa1388040:intron	30.0%
!	TGGTTTGAAAACCATTTTCA+TGG	+	tig0021032:80912-80931	None:intergenic	30.0%
	AACAGTTCATAAAGCATAAG+GGG	-	tig0021032:80962-80981	Msa1388040:intron	30.0%
	GTGGTAAAGAAAATATGGAA+AGG	+	tig0021032:81278-81297	None:intergenic	30.0%
	TGAAGAATGTTCACAAAACA+TGG	+	tig0021032:81348-81367	None:intergenic	30.0%
!	ACAAAGATGATGATGAAGTT+TGG	-	tig0021032:81550-81569	Msa1388040:intron	30.0%
	CACTTTATGCTTCACATAAA+TGG	-	tig0021032:81991-82010	Msa1388040:CDS	30.0%
!!!	AGGATTTTTTAGGGCTATAA+GGG	-	tig0021032:82099-82118	Msa1388040:CDS	30.0%
!	GCAAGAATCAAATTTTTCCT+AGG	+	tig0021032:82227-82246	None:intergenic	30.0%
!!!	CATACTTTTCCAAAAGTGTT+TGG	-	tig0021032:82246-82265	Msa1388040:intron	30.0%
!	TTTGGAAAACCAAACACTTT+TGG	+	tig0021032:82258-82277	None:intergenic	30.0%
	AAACTCATGAATAGATGTTG+GGG	-	tig0021032:82304-82323	Msa1388040:intron	30.0%
!!!	TTTTGGCGATAATGGAATTT+GGG	-	tig0021032:82327-82346	Msa1388040:CDS	30.0%
!!!	TTTTTTTCAAAACGGTATCC+TGG	-	tig0021032:82453-82472	Msa1388040:intron	30.0%
!!!	TTTTTTCAAAACGGTATCCT+GGG	-	tig0021032:82454-82473	Msa1388040:intron	30.0%
!	TAAATTTTCTTGAGACAGAG+GGG	+	tig0021032:82691-82710	None:intergenic	30.0%
!	CTTAAATTTTCTTGAGACAG+AGG	+	tig0021032:82693-82712	None:intergenic	30.0%
	TTGTTGAGACTGGAAAAATA+TGG	-	tig0021032:82749-82768	Msa1388040:intron	30.0%
!!	TACTTTTTGGTGATTAACTG+TGG	-	tig0021032:82903-82922	Msa1388040:intron	30.0%
	AGAGAACAAAATACTTCAGA+TGG	-	tig0021032:83203-83222	Msa1388040:intron	30.0%
	GTTTCAAAACCTATAACCAT+AGG	+	tig0021032:83353-83372	None:intergenic	30.0%
	AAAAATTAAGGGAGATCTCA+CGG	+	tig0021032:83619-83638	None:intergenic	30.0%
!!!	GAGATCTCCCTTAATTTTTT+TGG	-	tig0021032:83620-83639	Msa1388040:CDS	30.0%
	CCTATACTATATCCTGTAAT+TGG	+	tig0021032:83686-83705	None:intergenic	30.0%
	CCAATTACAGGATATAGTAT+AGG	-	tig0021032:83683-83702	Msa1388040:CDS	30.0%
	ACTAATTAGCATTAGATGAC+AGG	-	tig0021032:83742-83761	Msa1388040:five_prime_UTR	30.0%
	GAATCAATGGAAGCAATTGT+TGG	+	tig0021032:79905-79924	None:intergenic	35.0%
!!!	GGACAAGTATTTACTGGTTT+TGG	-	tig0021032:80086-80105	Msa1388040:three_prime_UTR	35.0%
	GTTGGAAGCCCTTTAAATTT+AGG	-	tig0021032:80134-80153	Msa1388040:three_prime_UTR	35.0%
!!	TTTTGAGTAGGGGAATTTTG+GGG	+	tig0021032:80243-80262	None:intergenic	35.0%
!!!	GTTTTTGAGTAGGGGAATTT+TGG	+	tig0021032:80245-80264	None:intergenic	35.0%
!!!	GATACATGGTTTTTGAGTAG+GGG	+	tig0021032:80253-80272	None:intergenic	35.0%
!!!	GAGATACATGGTTTTTGAGT+AGG	+	tig0021032:80255-80274	None:intergenic	35.0%
!	ATCAAGTTATGAGTGCTACT+AGG	-	tig0021032:80395-80414	Msa1388040:intron	35.0%
!	TCAAGTTATGAGTGCTACTA+GGG	-	tig0021032:80396-80415	Msa1388040:intron	35.0%
	TGGAGCTAAGAATATTGAAG+TGG	-	tig0021032:80559-80578	Msa1388040:CDS	35.0%
	GGAGCTAAGAATATTGAAGT+GGG	-	tig0021032:80560-80579	Msa1388040:CDS	35.0%
	AAGAATATTGAAGTGGGTGT+TGG	-	tig0021032:80566-80585	Msa1388040:intron	35.0%
!	TTGAAAATTTTCCAGGAGGT+AGG	-	tig0021032:80815-80834	Msa1388040:intron	35.0%
	AGTTATGCACTCCATGAAAA+TGG	-	tig0021032:80898-80917	Msa1388040:intron	35.0%
!	AAATGGTTTTCAAACCACCT+CGG	-	tig0021032:80915-80934	Msa1388040:intron	35.0%
	TTGAAGCAGAAGATGTTGTT+AGG	-	tig0021032:81154-81173	Msa1388040:intron	35.0%
	TGAAGCAGAAGATGTTGTTA+GGG	-	tig0021032:81155-81174	Msa1388040:intron	35.0%
	AAATATGGAAAGGATGGGAT+AGG	+	tig0021032:81268-81287	None:intergenic	35.0%
	CATCTTTGTCATTGTCATCT+AGG	+	tig0021032:81539-81558	None:intergenic	35.0%
	AGTTATCTCAAGGTCTAGTA+GGG	-	tig0021032:81686-81705	Msa1388040:intron	35.0%
!	TCAACCAATGAACATTGGTT+TGG	-	tig0021032:81711-81730	Msa1388040:intron	35.0%
	AAAGCCAAACCAATGTTCAT+TGG	+	tig0021032:81718-81737	None:intergenic	35.0%
	GCTTCAATGATCAGAAGAAA+AGG	+	tig0021032:81913-81932	None:intergenic	35.0%
!!	ACCATTTTCCATTTGGAATG+AGG	-	tig0021032:82079-82098	Msa1388040:CDS	35.0%
	TCCTCATTCCAAATGGAAAA+TGG	+	tig0021032:82083-82102	None:intergenic	35.0%
!!!	GAGGATTTTTTAGGGCTATA+AGG	-	tig0021032:82098-82117	Msa1388040:CDS	35.0%
!!!	ATTTTTTAGGGCTATAAGGG+AGG	-	tig0021032:82102-82121	Msa1388040:CDS	35.0%
!	ATGAATAGATGTTGGGGTTT+TGG	-	tig0021032:82310-82329	Msa1388040:intron	35.0%
!!!	GTTTTGGCGATAATGGAATT+TGG	-	tig0021032:82326-82345	Msa1388040:CDS	35.0%
!	AATGTTCGCGTATTGTTTTC+AGG	+	tig0021032:82590-82609	None:intergenic	35.0%
	GCTGTTTAAATTGTTGAGAC+TGG	-	tig0021032:82739-82758	Msa1388040:intron	35.0%
	AAATATGGTTATCTGCTGAG+AGG	-	tig0021032:82764-82783	Msa1388040:intron	35.0%
!	CTGTGTGACAATTTTAAACG+AGG	-	tig0021032:82855-82874	Msa1388040:intron	35.0%
	TGGTGATTAACTGTGGTATT+TGG	-	tig0021032:82910-82929	Msa1388040:intron	35.0%
	GGTGATTAACTGTGGTATTT+GGG	-	tig0021032:82911-82930	Msa1388040:intron	35.0%
	CAGAAAAAACTCACGAAAGA+GGG	+	tig0021032:83118-83137	None:intergenic	35.0%
	TCAGAAAAAACTCACGAAAG+AGG	+	tig0021032:83119-83138	None:intergenic	35.0%
!	ATTTAAGATACATTGCAGGC+TGG	-	tig0021032:83168-83187	Msa1388040:CDS	35.0%
!!!	CTTGTTGATTTTTTTTGCGC+TGG	-	tig0021032:83288-83307	Msa1388040:intron	35.0%
	CAAGTTCTTCAATCATTTGC+TGG	+	tig0021032:83377-83396	None:intergenic	35.0%
	GCAAATGATTGAAGAACTTG+TGG	-	tig0021032:83377-83396	Msa1388040:intron	35.0%
	AATGATTGAAGAACTTGTGG+AGG	-	tig0021032:83380-83399	Msa1388040:intron	35.0%
!	AAACTTGAAGCTAGTTCTTC+AGG	-	tig0021032:83456-83475	Msa1388040:intron	35.0%
	CACTCAAAACAATCAGTACA+TGG	+	tig0021032:83501-83520	None:intergenic	35.0%
!	ATGGGTTACTTACCAATTAC+AGG	-	tig0021032:83671-83690	Msa1388040:CDS	35.0%
	GCATTAGATGACAGGTATTT+AGG	-	tig0021032:83750-83769	Msa1388040:five_prime_UTR	35.0%
	AGATGACAGGTATTTAGGAA+TGG	-	tig0021032:83755-83774	Msa1388040:five_prime_UTR	35.0%
	TAGTAAAAGATACATGGGCA+AGG	-	tig0021032:83827-83846	Msa1388040:five_prime_UTR	35.0%
	AGTAAAAGATACATGGGCAA+GGG	-	tig0021032:83828-83847	Msa1388040:five_prime_UTR	35.0%
	GAAGAGAATAAGGAAGGGAA+AGG	+	tig0021032:80169-80188	None:intergenic	40.0%
!	CAAGTTATGAGTGCTACTAG+GGG	-	tig0021032:80397-80416	Msa1388040:intron	40.0%
!!	ATGCATTTTCTGGTGTTAGC+AGG	-	tig0021032:80428-80447	Msa1388040:intron	40.0%
!	CAAGCCTTATCGCTTTAAGT+GGG	-	tig0021032:81017-81036	Msa1388040:intron	40.0%
!	AAGCCTTATCGCTTTAAGTG+GGG	-	tig0021032:81018-81037	Msa1388040:intron	40.0%
	TCTGCAGTATCCAGAGATTT+AGG	+	tig0021032:81199-81218	None:intergenic	40.0%
	TCTTTACCACTTCATATGGG+TGG	-	tig0021032:81288-81307	Msa1388040:intron	40.0%
	CATAATCCACCCATATGAAG+TGG	+	tig0021032:81297-81316	None:intergenic	40.0%
	TGAATTTGATTCAACACCCC+AGG	+	tig0021032:81422-81441	None:intergenic	40.0%
	TCCCAGTTTACCGTTTAATC+CGG	-	tig0021032:81579-81598	Msa1388040:intron	40.0%
	TCAGCTGATCAGTTATCTCA+AGG	-	tig0021032:81676-81695	Msa1388040:intron	40.0%
	CAGTTATCTCAAGGTCTAGT+AGG	-	tig0021032:81685-81704	Msa1388040:intron	40.0%
	TCTGCAAAATCCACTGTTGA+AGG	-	tig0021032:81813-81832	Msa1388040:intron	40.0%
	CTGCAAAATCCACTGTTGAA+GGG	-	tig0021032:81814-81833	Msa1388040:intron	40.0%
!	TGCTGAGACCATTTTCCATT+TGG	-	tig0021032:82072-82091	Msa1388040:CDS	40.0%
	GAGAAGGTAGGCTAAAATTC+AGG	-	tig0021032:82153-82172	Msa1388040:CDS	40.0%
!!	GTGCCATTTGACTTGTATCA+CGG	-	tig0021032:82199-82218	Msa1388040:CDS	40.0%
!!	ATGAGTTGGTCATGTTGGTT+GGG	-	tig0021032:82419-82438	Msa1388040:intron	40.0%
!!!	CTTGGTTTTTGGCCAAAACA+GGG	-	tig0021032:82508-82527	Msa1388040:intron	40.0%
!!!	TTGGTTTTTGGCCAAAACAG+GGG	-	tig0021032:82509-82528	Msa1388040:intron	40.0%
	AAAAACTCACGAAAGAGGGA+AGG	+	tig0021032:83114-83133	None:intergenic	40.0%
	TTCCAAGTCTATCAGTGTTG+AGG	+	tig0021032:83245-83264	None:intergenic	40.0%
	TGGAGGAAAATGAGAAGCTT+CGG	-	tig0021032:83397-83416	Msa1388040:intron	40.0%
!	AGAACTAGCTTCAAGTTTGC+TGG	+	tig0021032:83454-83473	None:intergenic	40.0%
	CTTGCACGTTATCGCTTAAA+GGG	-	tig0021032:83582-83601	Msa1388040:intron	40.0%
	TTGCACGTTATCGCTTAAAG+GGG	-	tig0021032:83583-83602	Msa1388040:intron	40.0%
	TGGTAAGTAACCCATTAGCA+GGG	+	tig0021032:83666-83685	None:intergenic	40.0%
	TTGGTAAGTAACCCATTAGC+AGG	+	tig0021032:83667-83686	None:intergenic	40.0%
	GCGGTTACAGCTTGAATCAA+TGG	+	tig0021032:79918-79937	None:intergenic	45.0%
	ATCGTATTCGTAGAACGTGG+CGG	+	tig0021032:79937-79956	None:intergenic	45.0%
	AGCATCGTATTCGTAGAACG+TGG	+	tig0021032:79940-79959	None:intergenic	45.0%
!	TGTTGCAGTGAGTTGAGTTG+AGG	+	tig0021032:79963-79982	None:intergenic	45.0%
!!!	ACTGGTTTTGGAATCGGTTG+TGG	-	tig0021032:80098-80117	Msa1388040:three_prime_UTR	45.0%
!	TTTGGAATCGGTTGTGGAGT+TGG	-	tig0021032:80104-80123	Msa1388040:three_prime_UTR	45.0%
!!	ATCGGTTGTGGAGTTGGTAT+CGG	-	tig0021032:80110-80129	Msa1388040:three_prime_UTR	45.0%
!!	GGGGAATTTTGGGGAGATTT+GGG	+	tig0021032:80234-80253	None:intergenic	45.0%
!!	AGGGGAATTTTGGGGAGATT+TGG	+	tig0021032:80235-80254	None:intergenic	45.0%
!	GGTGCAACTGATGCATTTTC+TGG	-	tig0021032:80418-80437	Msa1388040:intron	45.0%
!!	ATTGAAGTGGGTGTTGGATG+TGG	-	tig0021032:80572-80591	Msa1388040:intron	45.0%
!	GTTGGATGTGGAGTTGGTTT+CGG	-	tig0021032:80584-80603	Msa1388040:intron	45.0%
!	TTCCAGGAGGTAGGTTTTTG+TGG	-	tig0021032:80824-80843	Msa1388040:intron	45.0%
	TTCCACAAAAACCTACCTCC+TGG	+	tig0021032:80829-80848	None:intergenic	45.0%
	CCACTTAAAGCGATAAGGCT+TGG	+	tig0021032:81019-81038	None:intergenic	45.0%
!	CCAAGCCTTATCGCTTTAAG+TGG	-	tig0021032:81016-81035	Msa1388040:intron	45.0%
!	CTTATCGCTTTAAGTGGGGT+CGG	-	tig0021032:81022-81041	Msa1388040:intron	45.0%
	GTTCGAGGCATAGAACACTA+TGG	+	tig0021032:81067-81086	None:intergenic	45.0%
	CCCGGATTAAACGGTAAACT+GGG	+	tig0021032:81583-81602	None:intergenic	45.0%
	CCCAGTTTACCGTTTAATCC+GGG	-	tig0021032:81580-81599	Msa1388040:intron	45.0%
	ACCCGGATTAAACGGTAAAC+TGG	+	tig0021032:81584-81603	None:intergenic	45.0%
	GGGTCTCAACCAATGAACAT+TGG	-	tig0021032:81706-81725	Msa1388040:intron	45.0%
!!	GTCGGCTGAAGTGTCTTTTA+TGG	+	tig0021032:81752-81771	None:intergenic	45.0%
!	ACTTCAGCCGACTCTACATA+TGG	-	tig0021032:81760-81779	Msa1388040:intron	45.0%
	TCGACTGCCATATGTAGAGT+CGG	+	tig0021032:81770-81789	None:intergenic	45.0%
	ATATGGCAGTCGAACTGAGA+AGG	-	tig0021032:81777-81796	Msa1388040:intron	45.0%
	AATCCACTGTTGAAGGGAGA+AGG	-	tig0021032:81820-81839	Msa1388040:intron	45.0%
!!	TGAGAGCTTACTGATTCGCT+GGG	+	tig0021032:81853-81872	None:intergenic	45.0%
!!	ATGAGAGCTTACTGATTCGC+TGG	+	tig0021032:81854-81873	None:intergenic	45.0%
	TAGTGTGGAGATGAGAAGGT+AGG	-	tig0021032:82141-82160	Msa1388040:CDS	45.0%
	TCAAATGGCACAAAGCCCTT+TGG	+	tig0021032:82190-82209	None:intergenic	45.0%
	GAGCCGTGATACAAGTCAAA+TGG	+	tig0021032:82205-82224	None:intergenic	45.0%
!!	TGTTGGGGTTTTGGCGATAA+TGG	-	tig0021032:82319-82338	Msa1388040:CDS	45.0%
!!	TACTGGTATGGTGGGTAGAA+AGG	-	tig0021032:82392-82411	Msa1388040:intron	45.0%
	GGTAGAAAGGATGGATGAGT+TGG	-	tig0021032:82405-82424	Msa1388040:intron	45.0%
!!	GATGGATGAGTTGGTCATGT+TGG	-	tig0021032:82414-82433	Msa1388040:intron	45.0%
!!	GATGAGTTGGTCATGTTGGT+TGG	-	tig0021032:82418-82437	Msa1388040:intron	45.0%
!	TGGGGTTTTCTTTAACACCC+AGG	+	tig0021032:82474-82493	None:intergenic	45.0%
!!	CTCCCTATGAGCTTGGTTTT+TGG	-	tig0021032:82497-82516	Msa1388040:intron	45.0%
	GGCCAAAAACCAAGCTCATA+GGG	+	tig0021032:82502-82521	None:intergenic	45.0%
	TGGCCAAAAACCAAGCTCAT+AGG	+	tig0021032:82503-82522	None:intergenic	45.0%
!!!	GCTTGGTTTTTGGCCAAAAC+AGG	-	tig0021032:82507-82526	Msa1388040:intron	45.0%
!	GATGCAACATTCCCCTGTTT+TGG	+	tig0021032:82523-82542	None:intergenic	45.0%
	TAACAACAGACGATGCCTAC+AGG	+	tig0021032:82833-82852	None:intergenic	45.0%
	GTCCTCAACACTGATAGACT+TGG	-	tig0021032:83240-83259	Msa1388040:intron	45.0%
!!	CTAGCTTCAAGTTTGCTGGA+TGG	+	tig0021032:83450-83469	None:intergenic	45.0%
	GCTTGCACGTTATCGCTTAA+AGG	-	tig0021032:83581-83600	Msa1388040:intron	45.0%
	AAGGGAGATCTCACGGTTTA+GGG	+	tig0021032:83612-83631	None:intergenic	45.0%
	TAAGGGAGATCTCACGGTTT+AGG	+	tig0021032:83613-83632	None:intergenic	45.0%
	TACAAGTTGCCCCTGCTAAT+GGG	-	tig0021032:83653-83672	Msa1388040:CDS	45.0%
	GGTAAGTAACCCATTAGCAG+GGG	+	tig0021032:83665-83684	None:intergenic	45.0%
!!	TGTGGAGTTGGTATCGGTGT+TGG	-	tig0021032:80116-80135	Msa1388040:three_prime_UTR	50.0%
!	TGTGGAGTTGGTTTCGGTCA+TGG	-	tig0021032:80590-80609	Msa1388040:intron	50.0%
!	GTTGGTTTCGGTCATGGTGT+TGG	-	tig0021032:80596-80615	Msa1388040:intron	50.0%
!	TTCGGTCATGGTGTTGGAGT+TGG	-	tig0021032:80602-80621	Msa1388040:intron	50.0%
!	TTTTCAAACCACCTCGGCAC+TGG	-	tig0021032:80921-80940	Msa1388040:intron	50.0%
	CGACCCCACTTAAAGCGATA+AGG	+	tig0021032:81024-81043	None:intergenic	50.0%
	TTTAAGTGGGGTCGGCTACA+AGG	-	tig0021032:81030-81049	Msa1388040:intron	50.0%
!!	ACAGGACTTGCTGTGAAACC+TGG	-	tig0021032:81401-81420	Msa1388040:intron	50.0%
!!	CAGGACTTGCTGTGAAACCT+GGG	-	tig0021032:81402-81421	Msa1388040:intron	50.0%
!!	AGGACTTGCTGTGAAACCTG+GGG	-	tig0021032:81403-81422	Msa1388040:intron	50.0%
	GGCAATGCACCCGGATTAAA+CGG	+	tig0021032:81592-81611	None:intergenic	50.0%
	GTGGCACTTTGTAAGGATGC+TGG	+	tig0021032:81613-81632	None:intergenic	50.0%
!	GCATCCTTACAAAGTGCCAC+AGG	-	tig0021032:81613-81632	Msa1388040:intron	50.0%
	TGCACCTGTGGCACTTTGTA+AGG	+	tig0021032:81620-81639	None:intergenic	50.0%
!	CCACACTACGAGTTGGAACT+TGG	+	tig0021032:82129-82148	None:intergenic	50.0%
	CCAAGTTCCAACTCGTAGTG+TGG	-	tig0021032:82126-82145	Msa1388040:CDS	50.0%
	CTCATCTCCACACTACGAGT+TGG	+	tig0021032:82136-82155	None:intergenic	50.0%
	CTCGTAGTGTGGAGATGAGA+AGG	-	tig0021032:82137-82156	Msa1388040:CDS	50.0%
	TCAGGCAAAGTAGCCTCCAA+AGG	-	tig0021032:82171-82190	Msa1388040:CDS	50.0%
	CAGGCAAAGTAGCCTCCAAA+GGG	-	tig0021032:82172-82191	Msa1388040:CDS	50.0%
	AATGGCACAAAGCCCTTTGG+AGG	+	tig0021032:82187-82206	None:intergenic	50.0%
!	TGACTTGTATCACGGCTCCT+AGG	-	tig0021032:82207-82226	Msa1388040:intron	50.0%
	CACCACAATAGCAGCCATTG+CGG	+	tig0021032:82368-82387	None:intergenic	50.0%
!!	TGCTATTGTGGTGGTGCTAC+TGG	-	tig0021032:82375-82394	Msa1388040:intron	50.0%
!!	TTGTGGTGGTGCTACTGGTA+TGG	-	tig0021032:82380-82399	Msa1388040:intron	50.0%
!!	GGTATGGTGGGTAGAAAGGA+TGG	-	tig0021032:82396-82415	Msa1388040:intron	50.0%
	CAAGCTCATAGGGAGAGATG+GGG	+	tig0021032:82492-82511	None:intergenic	50.0%
	CCAAGCTCATAGGGAGAGAT+GGG	+	tig0021032:82493-82512	None:intergenic	50.0%
	ACCAAGCTCATAGGGAGAGA+TGG	+	tig0021032:82494-82513	None:intergenic	50.0%
	TGCACATGTCCTCTTCCTGT+AGG	-	tig0021032:82815-82834	Msa1388040:intron	50.0%
	ACTCACGAAAGAGGGAAGGT+GGG	+	tig0021032:83110-83129	None:intergenic	50.0%
	AACTCACGAAAGAGGGAAGG+TGG	+	tig0021032:83111-83130	None:intergenic	50.0%
	GCTTCGGCAGATACTAGTGA+AGG	-	tig0021032:83413-83432	Msa1388040:intron	50.0%
	AGGGAGATCTCACGGTTTAG+GGG	+	tig0021032:83611-83630	None:intergenic	50.0%
	CATTAGCAGGGGCAACTTGT+AGG	+	tig0021032:83654-83673	None:intergenic	50.0%
	CTACAAGTTGCCCCTGCTAA+TGG	-	tig0021032:83652-83671	Msa1388040:CDS	50.0%
	TACATGGGCAAGGGTCTGTT+TGG	-	tig0021032:83837-83856	Msa1388040:five_prime_UTR	50.0%
	AAGGGTCTGTTTGGTTGGAG+AGG	-	tig0021032:83846-83865	Msa1388040:five_prime_UTR	50.0%
!!	GTGGGTGTTGGATGTGGAGT+TGG	-	tig0021032:80578-80597	Msa1388040:intron	55.0%
	AATTGTAGCCTCCAGTGCCG+AGG	+	tig0021032:80935-80954	None:intergenic	55.0%
!	TTGTTAGGGTGCCACAACCG+CGG	-	tig0021032:81169-81188	Msa1388040:intron	55.0%
	ATTTAGGCATGCCGCGGTTG+TGG	+	tig0021032:81183-81202	None:intergenic	55.0%
	CCAGAGATTTAGGCATGCCG+CGG	+	tig0021032:81189-81208	None:intergenic	55.0%
	AAGGATGCTGGCAATGCACC+CGG	+	tig0021032:81601-81620	None:intergenic	55.0%
	TCCAGAACTGACTGCACCTG+TGG	+	tig0021032:81632-81651	None:intergenic	55.0%
	CCTCCTTCTCCCTTCAACAG+TGG	+	tig0021032:81826-81845	None:intergenic	55.0%
	CCACTGTTGAAGGGAGAAGG+AGG	-	tig0021032:81823-81842	Msa1388040:intron	55.0%
	CTGTTGAAGGGAGAAGGAGG+AGG	-	tig0021032:81826-81845	Msa1388040:intron	55.0%
	ACAGCAATCGCAAGCCGCAA+TGG	-	tig0021032:82351-82370	Msa1388040:intron	55.0%
	AGCCGCAATGGCTGCTATTG+TGG	-	tig0021032:82363-82382	Msa1388040:intron	55.0%
	CGCAATGGCTGCTATTGTGG+TGG	-	tig0021032:82366-82385	Msa1388040:intron	55.0%
!!	TGGTGGTGCTACTGGTATGG+TGG	-	tig0021032:82383-82402	Msa1388040:intron	55.0%
!!	GGTGGTGCTACTGGTATGGT+GGG	-	tig0021032:82384-82403	Msa1388040:intron	55.0%
	CCCATCTCTCCCTATGAGCT+TGG	-	tig0021032:82490-82509	Msa1388040:intron	55.0%
	CAGACGATGCCTACAGGAAG+AGG	+	tig0021032:82827-82846	None:intergenic	55.0%
	CTCACGAAAGAGGGAAGGTG+GGG	+	tig0021032:83109-83128	None:intergenic	55.0%
	TGGGCAAGGGTCTGTTTGGT+TGG	-	tig0021032:83841-83860	Msa1388040:five_prime_UTR	55.0%
!	TCAAACCACCTCGGCACTGG+AGG	-	tig0021032:80924-80943	Msa1388040:intron	60.0%
	CCGCGGCATGCCTAAATCTC+TGG	-	tig0021032:81186-81205	Msa1388040:intron	60.0%
	GCCACAGGTGCAGTCAGTTC+TGG	-	tig0021032:81628-81647	Msa1388040:intron	60.0%
!	TGTAGCCTCCAGTGCCGAGG+TGG	+	tig0021032:80932-80951	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0021032	gene	79888	83878	79888	ID=Msa1388040;Name=Msa1388040
tig0021032	mRNA	79888	83878	79888	ID=Msa1388040-mRNA-1;Parent=Msa1388040;Name=Msa1388040-mRNA-1;_AED=0.18;_eAED=0.18;_QI=138\|0.85\|0.75\|1\|0.71\|0.75\|8\|333\|292
tig0021032	exon	79888	80403	79888	ID=Msa1388040-mRNA-1:exon:10987;Parent=Msa1388040-mRNA-1
tig0021032	exon	80542	80580	80542	ID=Msa1388040-mRNA-1:exon:10986;Parent=Msa1388040-mRNA-1
tig0021032	exon	81905	82059	81905	ID=Msa1388040-mRNA-1:exon:10985;Parent=Msa1388040-mRNA-1
tig0021032	exon	82069	82225	82069	ID=Msa1388040-mRNA-1:exon:10984;Parent=Msa1388040-mRNA-1
tig0021032	exon	82312	82361	82312	ID=Msa1388040-mRNA-1:exon:10983;Parent=Msa1388040-mRNA-1
tig0021032	exon	83143	83218	83143	ID=Msa1388040-mRNA-1:exon:10982;Parent=Msa1388040-mRNA-1
tig0021032	exon	83301	83389	83301	ID=Msa1388040-mRNA-1:exon:10981;Parent=Msa1388040-mRNA-1
tig0021032	exon	83611	83878	83611	ID=Msa1388040-mRNA-1:exon:10980;Parent=Msa1388040-mRNA-1
tig0021032	five_prime_UTR	83741	83878	83741	ID=Msa1388040-mRNA-1:five_prime_utr;Parent=Msa1388040-mRNA-1
tig0021032	CDS	83611	83740	83611	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	83301	83389	83301	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	83143	83218	83143	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	82312	82361	82312	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	82069	82225	82069	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	81905	82059	81905	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	80542	80580	80542	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	CDS	80221	80403	80221	ID=Msa1388040-mRNA-1:cds;Parent=Msa1388040-mRNA-1
tig0021032	three_prime_UTR	79888	80220	79888	ID=Msa1388040-mRNA-1:three_prime_utr;Parent=Msa1388040-mRNA-1

Gene Sequence

>Msa1388040

ATGGAAAACAAAAATGAAGGAAATGAAATTCGATTTTCGAATCCATTTACTTTGAAATTTGGACAAGTATTTACTGGTTTTGGAATCGGTTGTGGAGTTGGTATCGGTGTTGGAAGCCCTTTAAATTTAGGTGCAATACCGATGTTGAATCAAGTTATGAGTGCTACTAGGGGTGCAACTGATGCATTTTCTGGTGTTAGCAGGCATGTTAATACTTCTTTGAGGAAGATTGGAGCTAAGAATATTGAAGTGGGTGTTGGATGTGGAGTTGGTTTCGGTCATGGTGTTGGAGTTGGACTTGCTGTGAAACCTGGGGTGTTGAATCAAATTCAATCATGTCTCGTAATGACAATGACAAAGATGATGATGAAGTTTGGAATTACTCCCAGTTTACCGTTTAATCCGGGTGCATTGCCAGCATCCTTACAAAGTGCCACAGGTGCAGTCAGTTCTGGAAGCGTGACACAGTTAGCAACTAAATCAGCTGATCAGTTATCTCAAGGGTCTCAACCAATGAACATTGGTTTGGCTTTTGATAAAACTGCCATAAAAGACACTTCAGCCGACTCTACATATGGCAGTCGAACTGAGAAGGTTCTTAACAATTTTCTGCAAAATCCACTGTTGAAGGGAGAAGGAGGAGGACCCAGCGAATCAGCTGGACGTTTGATCACAGAGAACAAAATACTTCAGATGGTTTTGAAACACCAGCAAATGATTGAAGAACTTGTGGAGGAAAATGAGAAGCTTCGGCAGATACTAGTGAAGGAGCTGAAAGTTCCATCCAGCAAACTTGAAGCTAGTTCTTCAGGTAGAATTAGAAATAAGTTGCCATGTACTGATTGTTTTGAGTGTCGAAGAAAACAAAGAAGAAAGTAG

Protein sequence

>Msa1388040

MENKNEGNEIRFSNPFTLKFGQVFTGFGIGCGVGIGVGSPLNLGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKIGAKNIEVGVGCGVGFGHGVGVGLAVKPGVLNQIQSCLVMTMTKMMMKFGITPSLPFNPGALPASLQSATGAVSSGSVTQLATKSADQLSQGSQPMNIGLAFDKTAIKDTSADSTYGSRTEKVLNNFLQNPLLKGEGGGPSESAGRLITENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPSSKLEASSSGRIRNKLPCTDCFECRRKQRRK*