Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796590 | XP_013453441.1 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 7.18e-171 | 484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796590 | A0A072UNQ3 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 3.43e-171 | 484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0796590 | 0.840220 | 9.911033e-58 | -8.615850e-47 |
| Msa0011720 | Msa0796590 | 0.813562 | 2.403654e-51 | -8.615850e-47 |
| Msa0017120 | Msa0796590 | 0.810427 | 1.159243e-50 | -8.615850e-47 |
| Msa0017160 | Msa0796590 | 0.802223 | 6.210857e-49 | -8.615850e-47 |
| Msa0020630 | Msa0796590 | 0.805643 | 1.208818e-49 | -8.615850e-47 |
| Msa0027540 | Msa0796590 | 0.818700 | 1.709777e-52 | -8.615850e-47 |
| Msa0030000 | Msa0796590 | 0.820750 | 5.817352e-53 | -8.615850e-47 |
| Msa0055280 | Msa0796590 | 0.800572 | 1.353072e-48 | -8.615850e-47 |
| Msa0056040 | Msa0796590 | 0.804916 | 1.716650e-49 | -8.615850e-47 |
| Msa0060600 | Msa0796590 | 0.813786 | 2.145608e-51 | -8.615850e-47 |
| Msa0075310 | Msa0796590 | 0.820648 | 6.138124e-53 | -8.615850e-47 |
| Msa0079250 | Msa0796590 | 0.807558 | 4.767938e-50 | -8.615850e-47 |
| Msa0084680 | Msa0796590 | 0.801503 | 8.733397e-49 | -8.615850e-47 |
| Msa0089210 | Msa0796590 | 0.801574 | 8.442503e-49 | -8.615850e-47 |
| Msa0091770 | Msa0796590 | 0.816434 | 5.541619e-52 | -8.615850e-47 |
| Msa0105340 | Msa0796590 | 0.819819 | 9.506978e-53 | -8.615850e-47 |
| Msa0105420 | Msa0796590 | 0.800788 | 1.222991e-48 | -8.615850e-47 |
| Msa0114250 | Msa0796590 | 0.800355 | 1.498662e-48 | -8.615850e-47 |
| Msa0605230 | Msa0796590 | 0.802225 | 6.207152e-49 | -8.615850e-47 |
| Msa0605620 | Msa0796590 | 0.801391 | 9.207661e-49 | -8.615850e-47 |
| Msa0606060 | Msa0796590 | 0.833958 | 3.954005e-56 | -8.615850e-47 |
| Msa0614230 | Msa0796590 | 0.812521 | 4.065976e-51 | -8.615850e-47 |
| Msa0617370 | Msa0796590 | 0.817302 | 3.538900e-52 | -8.615850e-47 |
| Msa0619330 | Msa0796590 | 0.836237 | 1.052515e-56 | -8.615850e-47 |
| Msa0621890 | Msa0796590 | 0.822651 | 2.113914e-53 | -8.615850e-47 |
| Msa0624730 | Msa0796590 | 0.846009 | 2.843276e-59 | -8.615850e-47 |
| Msa0631840 | Msa0796590 | 0.808001 | 3.838381e-50 | -8.615850e-47 |
| Msa0647000 | Msa0796590 | 0.835523 | 1.597015e-56 | -8.615850e-47 |
| Msa0654060 | Msa0796590 | 0.807533 | 4.825447e-50 | -8.615850e-47 |
| Msa0655660 | Msa0796590 | -0.814260 | 1.686616e-51 | -8.615850e-47 |
| Msa0663090 | Msa0796590 | 0.817975 | 2.494391e-52 | -8.615850e-47 |
| Msa0674220 | Msa0796590 | 0.846708 | 1.833435e-59 | -8.615850e-47 |
| Msa0674300 | Msa0796590 | 0.818385 | 2.015280e-52 | -8.615850e-47 |
| Msa0681890 | Msa0796590 | 0.822087 | 2.857891e-53 | -8.615850e-47 |
| Msa0686610 | Msa0796590 | 0.835046 | 2.107084e-56 | -8.615850e-47 |
| Msa0697140 | Msa0796590 | 0.801476 | 8.844928e-49 | -8.615850e-47 |
| Msa0700070 | Msa0796590 | 0.804070 | 2.577171e-49 | -8.615850e-47 |
| Msa0706370 | Msa0796590 | 0.805756 | 1.145027e-49 | -8.615850e-47 |
| Msa0707780 | Msa0796590 | 0.811266 | 7.627587e-51 | -8.615850e-47 |
| Msa0714600 | Msa0796590 | 0.819315 | 1.238845e-52 | -8.615850e-47 |
| Msa0719340 | Msa0796590 | 0.805567 | 1.253994e-49 | -8.615850e-47 |
| Msa0723140 | Msa0796590 | 0.806590 | 7.640370e-50 | -8.615850e-47 |
| Msa0724050 | Msa0796590 | 0.842259 | 2.884070e-58 | -8.615850e-47 |
| Msa0726610 | Msa0796590 | 0.830553 | 2.751748e-55 | -8.615850e-47 |
| Msa0730180 | Msa0796590 | 0.810745 | 9.895605e-51 | -8.615850e-47 |
| Msa0733000 | Msa0796590 | 0.832122 | 1.131976e-55 | -8.615850e-47 |
| Msa0739570 | Msa0796590 | 0.824037 | 1.002809e-53 | -8.615850e-47 |
| Msa0750380 | Msa0796590 | 0.805562 | 1.257126e-49 | -8.615850e-47 |
| Msa0754860 | Msa0796590 | 0.944965 | 7.366601e-104 | -8.615850e-47 |
| Msa0763880 | Msa0796590 | 0.836250 | 1.044521e-56 | -8.615850e-47 |
| Msa0763910 | Msa0796590 | 0.820970 | 5.174777e-53 | -8.615850e-47 |
| Msa0772150 | Msa0796590 | 0.813690 | 2.252952e-51 | -8.615850e-47 |
| Msa0772210 | Msa0796590 | 0.823293 | 1.497718e-53 | -8.615850e-47 |
| Msa0775440 | Msa0796590 | 0.800058 | 1.722098e-48 | -8.615850e-47 |
| Msa0782330 | Msa0796590 | 0.807308 | 5.385591e-50 | -8.615850e-47 |
| Msa0789270 | Msa0796590 | 0.800900 | 1.160065e-48 | -8.615850e-47 |
| Msa0789280 | Msa0796590 | 0.803251 | 3.810303e-49 | -8.615850e-47 |
| Msa0789290 | Msa0796590 | 0.802100 | 6.583916e-49 | -8.615850e-47 |
| Msa0789300 | Msa0796590 | 0.801426 | 9.052979e-49 | -8.615850e-47 |
| Msa0791070 | Msa0796590 | 0.810710 | 1.006921e-50 | -8.615850e-47 |
| Msa0796590 | Msa0796810 | 0.904093 | 1.758867e-79 | -8.615850e-47 |
| Msa0796590 | Msa0797220 | 0.809677 | 1.681296e-50 | -8.615850e-47 |
| Msa0796590 | Msa0810020 | 0.816168 | 6.355982e-52 | -8.615850e-47 |
| Msa0796590 | Msa0811510 | 0.816144 | 6.434355e-52 | -8.615850e-47 |
| Msa0796590 | Msa0820670 | 0.811871 | 5.637175e-51 | -8.615850e-47 |
| Msa0796590 | Msa0830720 | 0.805950 | 1.041953e-49 | -8.615850e-47 |
| Msa0796590 | Msa0833940 | 0.953206 | 4.565625e-111 | -8.615850e-47 |
| Msa0796590 | Msa0834130 | 0.979836 | 7.509268e-149 | -8.615850e-47 |
| Msa0796590 | Msa0837990 | 0.819760 | 9.803819e-53 | -8.615850e-47 |
| Msa0796590 | Msa0844100 | 0.805268 | 1.449297e-49 | -8.615850e-47 |
| Msa0796590 | Msa0847200 | 0.814493 | 1.498172e-51 | -8.615850e-47 |
| Msa0796590 | Msa0851740 | 0.819833 | 9.436550e-53 | -8.615850e-47 |
| Msa0796590 | Msa0860270 | 0.829187 | 5.923661e-55 | -8.615850e-47 |
| Msa0796590 | Msa0872660 | 0.806470 | 8.100831e-50 | -8.615850e-47 |
| Msa0796590 | Msa0886980 | 0.812522 | 4.063385e-51 | -8.615850e-47 |
| Msa0796590 | Msa0890250 | 0.808716 | 2.701208e-50 | -8.615850e-47 |
| Msa0796590 | Msa0903730 | 0.815813 | 7.626853e-52 | -8.615850e-47 |
| Msa0796590 | Msa0907700 | 0.806312 | 8.743123e-50 | -8.615850e-47 |
| Msa0796590 | Msa0925160 | 0.810541 | 1.095310e-50 | -8.615850e-47 |
| Msa0796590 | Msa0937940 | 0.808813 | 2.575616e-50 | -8.615850e-47 |
| Msa0796590 | Msa0951710 | 0.810372 | 1.191311e-50 | -8.615850e-47 |
| Msa0796590 | Msa0952950 | 0.802612 | 5.165501e-49 | -8.615850e-47 |
| Msa0796590 | Msa0952990 | 0.810297 | 1.236588e-50 | -8.615850e-47 |
| Msa0796590 | Msa0955260 | 0.801919 | 7.174545e-49 | -8.615850e-47 |
| Msa0796590 | Msa0971860 | 0.811543 | 6.641208e-51 | -8.615850e-47 |
| Msa0796590 | Msa0973230 | 0.825945 | 3.553993e-54 | -8.615850e-47 |
| Msa0796590 | Msa0980440 | 0.804200 | 2.421525e-49 | -8.615850e-47 |
| Msa0796590 | Msa0988480 | 0.810636 | 1.044314e-50 | -8.615850e-47 |
| Msa0796590 | Msa0990520 | 0.818965 | 1.488346e-52 | -8.615850e-47 |
| Msa0796590 | Msa1002040 | 0.809438 | 1.891858e-50 | -8.615850e-47 |
| Msa0796590 | Msa1038320 | 0.859500 | 3.962323e-63 | -8.615850e-47 |
| Msa0796590 | Msa1044040 | 0.813927 | 1.997753e-51 | -8.615850e-47 |
| Msa0796590 | Msa1072350 | 0.821787 | 3.353932e-53 | -8.615850e-47 |
| Msa0796590 | Msa1089530 | 0.830013 | 3.729540e-55 | -8.615850e-47 |
| Msa0796590 | Msa1098560 | 0.804591 | 2.006713e-49 | -8.615850e-47 |
| Msa0796590 | Msa1118140 | 0.825266 | 5.148069e-54 | -8.615850e-47 |
| Msa0796590 | Msa1122510 | 0.810353 | 1.202211e-50 | -8.615850e-47 |
| Msa0796590 | Msa1140010 | 0.824345 | 8.488202e-54 | -8.615850e-47 |
| Msa0796590 | Msa1157160 | 0.819107 | 1.381258e-52 | -8.615850e-47 |
| Msa0796590 | Msa1159360 | 0.806586 | 7.653603e-50 | -8.615850e-47 |
| Msa0796590 | Msa1166180 | 0.806732 | 7.129577e-50 | -8.615850e-47 |
| Msa0796590 | Msa1166280 | 0.800781 | 1.226619e-48 | -8.615850e-47 |
| Msa0796590 | Msa1172590 | 0.817245 | 3.644832e-52 | -8.615850e-47 |
| Msa0796590 | Msa1204120 | 0.822155 | 2.755789e-53 | -8.615850e-47 |
| Msa0796590 | Msa1210770 | 0.810712 | 1.005658e-50 | -8.615850e-47 |
| Msa0796590 | Msa1214900 | 0.808782 | 2.614636e-50 | -8.615850e-47 |
| Msa0796590 | Msa1220230 | 0.801915 | 7.187766e-49 | -8.615850e-47 |
| Msa0796590 | Msa1226600 | 0.812227 | 4.714068e-51 | -8.615850e-47 |
| Msa0796590 | Msa1252230 | 0.807122 | 5.898649e-50 | -8.615850e-47 |
| Msa0796590 | Msa1262310 | 0.813645 | 2.304271e-51 | -8.615850e-47 |
| Msa0796590 | Msa1265960 | 0.820517 | 6.579094e-53 | -8.615850e-47 |
| Msa0796590 | Msa1280130 | 0.800051 | 1.727992e-48 | -8.615850e-47 |
| Msa0796590 | Msa1303780 | 0.819017 | 1.448016e-52 | -8.615850e-47 |
| Msa0796590 | Msa1323060 | 0.807517 | 4.864054e-50 | -8.615850e-47 |
| Msa0796590 | Msa1341930 | 0.803050 | 4.193413e-49 | -8.615850e-47 |
| Msa0796590 | Msa1347620 | 0.804944 | 1.693690e-49 | -8.615850e-47 |
| Msa0796590 | Msa1352290 | 0.815484 | 9.030576e-52 | -8.615850e-47 |
| Msa0796590 | Msa1355260 | 0.831785 | 1.371237e-55 | -8.615850e-47 |
| Msa0796590 | Msa1367940 | 0.800650 | 1.304503e-48 | -8.615850e-47 |
| Msa0796590 | Msa1381130 | 0.815879 | 7.373625e-52 | -8.615850e-47 |
| Msa0796590 | Msa1387090 | 0.805230 | 1.475515e-49 | -8.615850e-47 |
| Msa0796590 | Msa1388040 | 0.984450 | 1.348468e-160 | -8.615850e-47 |
| Msa0796590 | Msa1395570 | 0.822699 | 2.059477e-53 | -8.615850e-47 |
| Msa0796590 | Msa1397540 | 0.804525 | 2.072124e-49 | -8.615850e-47 |
| Msa0796590 | Msa1405180 | 0.818300 | 2.106426e-52 | -8.615850e-47 |
| Msa0796590 | Msa1405770 | 0.800522 | 1.385631e-48 | -8.615850e-47 |
| Msa0796590 | Msa1418200 | 0.831768 | 1.384360e-55 | -8.615850e-47 |
| Msa0796590 | Msa1428420 | 0.833702 | 4.581858e-56 | -8.615850e-47 |
| Msa0796590 | Msa1431000 | 0.824915 | 6.230437e-54 | -8.615850e-47 |
| Msa0796590 | Msa1435470 | 0.814774 | 1.298158e-51 | -8.615850e-47 |
| Msa0796590 | Msa1447560 | 0.844647 | 6.641433e-59 | -8.615850e-47 |
| Msa0796590 | Msa1456810 | 0.860398 | 2.124150e-63 | -8.615850e-47 |
| Msa0796590 | Msa1458920 | 0.818954 | 1.496754e-52 | -8.615850e-47 |
| Msa0796590 | Msa1464560 | 0.857427 | 1.644961e-62 | -8.615850e-47 |
| Msa0125230 | Msa0796590 | 0.819210 | 1.308891e-52 | -8.615850e-47 |
| Msa0141550 | Msa0796590 | 0.804483 | 2.114143e-49 | -8.615850e-47 |
| Msa0141670 | Msa0796590 | 0.816951 | 4.242591e-52 | -8.615850e-47 |
| Msa0146020 | Msa0796590 | 0.819058 | 1.417762e-52 | -8.615850e-47 |
| Msa0149500 | Msa0796590 | 0.807748 | 4.344407e-50 | -8.615850e-47 |
| Msa0151690 | Msa0796590 | 0.806895 | 6.586009e-50 | -8.615850e-47 |
| Msa0159750 | Msa0796590 | 0.807927 | 3.978445e-50 | -8.615850e-47 |
| Msa0164360 | Msa0796590 | 0.851676 | 7.599180e-61 | -8.615850e-47 |
| Msa0168100 | Msa0796590 | 0.814776 | 1.296491e-51 | -8.615850e-47 |
| Msa0183610 | Msa0796590 | 0.804865 | 1.759828e-49 | -8.615850e-47 |
| Msa0183620 | Msa0796590 | 0.804997 | 1.651303e-49 | -8.615850e-47 |
| Msa0185390 | Msa0796590 | 0.809609 | 1.739184e-50 | -8.615850e-47 |
| Msa0185480 | Msa0796590 | 0.807498 | 4.908575e-50 | -8.615850e-47 |
| Msa0194570 | Msa0796590 | 0.803246 | 3.820027e-49 | -8.615850e-47 |
| Msa0203640 | Msa0796590 | 0.805251 | 1.460607e-49 | -8.615850e-47 |
| Msa0207000 | Msa0796590 | 0.831784 | 1.371545e-55 | -8.615850e-47 |
| Msa0208520 | Msa0796590 | 0.819690 | 1.017477e-52 | -8.615850e-47 |
| Msa0222070 | Msa0796590 | 0.823071 | 1.687413e-53 | -8.615850e-47 |
| Msa0222120 | Msa0796590 | 0.824210 | 9.132088e-54 | -8.615850e-47 |
| Msa0227290 | Msa0796590 | 0.808065 | 3.719180e-50 | -8.615850e-47 |
| Msa0227490 | Msa0796590 | 0.800035 | 1.740430e-48 | -8.615850e-47 |
| Msa0227500 | Msa0796590 | 0.819047 | 1.425893e-52 | -8.615850e-47 |
| Msa0371070 | Msa0796590 | 0.803472 | 3.429519e-49 | -8.615850e-47 |
| Msa0371610 | Msa0796590 | 0.827064 | 1.922962e-54 | -8.615850e-47 |
| Msa0413740 | Msa0796590 | 0.822752 | 2.002649e-53 | -8.615850e-47 |
| Msa0414070 | Msa0796590 | 0.809293 | 2.032772e-50 | -8.615850e-47 |
| Msa0418000 | Msa0796590 | 0.812343 | 4.446294e-51 | -8.615850e-47 |
| Msa0421800 | Msa0796590 | 0.808115 | 3.628774e-50 | -8.615850e-47 |
| Msa0423360 | Msa0796590 | -0.811802 | 5.835697e-51 | -8.615850e-47 |
| Msa0423600 | Msa0796590 | 0.800163 | 1.639181e-48 | -8.615850e-47 |
| Msa0427050 | Msa0796590 | 0.817350 | 3.452329e-52 | -8.615850e-47 |
| Msa0458790 | Msa0796590 | 0.822286 | 2.569483e-53 | -8.615850e-47 |
| Msa0459120 | Msa0796590 | 0.804705 | 1.900104e-49 | -8.615850e-47 |
| Msa0480320 | Msa0796590 | 0.810862 | 9.332766e-51 | -8.615850e-47 |
| Msa0482680 | Msa0796590 | 0.810281 | 1.246207e-50 | -8.615850e-47 |
| Msa0240780 | Msa0796590 | 0.807247 | 5.549197e-50 | -8.615850e-47 |
| Msa0252180 | Msa0796590 | 0.844094 | 9.349817e-59 | -8.615850e-47 |
| Msa0257130 | Msa0796590 | 0.802817 | 4.686620e-49 | -8.615850e-47 |
| Msa0263620 | Msa0796590 | 0.820588 | 6.336180e-53 | -8.615850e-47 |
| Msa0269360 | Msa0796590 | 0.819003 | 1.458559e-52 | -8.615850e-47 |
| Msa0278620 | Msa0796590 | 0.841461 | 4.684948e-58 | -8.615850e-47 |
| Msa0281570 | Msa0796590 | 0.804420 | 2.178529e-49 | -8.615850e-47 |
| Msa0282170 | Msa0796590 | 0.804131 | 2.502640e-49 | -8.615850e-47 |
| Msa0288240 | Msa0796590 | 0.818012 | 2.447312e-52 | -8.615850e-47 |
| Msa0288330 | Msa0796590 | 0.806444 | 8.202324e-50 | -8.615850e-47 |
| Msa0296760 | Msa0796590 | 0.817044 | 4.043335e-52 | -8.615850e-47 |
| Msa0298940 | Msa0796590 | 0.817405 | 3.355212e-52 | -8.615850e-47 |
| Msa0298970 | Msa0796590 | 0.813842 | 2.085773e-51 | -8.615850e-47 |
| Msa0301180 | Msa0796590 | 0.834208 | 3.422443e-56 | -8.615850e-47 |
| Msa0306130 | Msa0796590 | 0.832300 | 1.022545e-55 | -8.615850e-47 |
| Msa0318000 | Msa0796590 | 0.845888 | 3.065517e-59 | -8.615850e-47 |
| Msa0320540 | Msa0796590 | 0.823894 | 1.083326e-53 | -8.615850e-47 |
| Msa0323630 | Msa0796590 | 0.800869 | 1.177090e-48 | -8.615850e-47 |
| Msa0330270 | Msa0796590 | 0.829693 | 4.462494e-55 | -8.615850e-47 |
| Msa0331780 | Msa0796590 | 0.802895 | 4.515518e-49 | -8.615850e-47 |
| Msa0336270 | Msa0796590 | 0.826400 | 2.769898e-54 | -8.615850e-47 |
| Msa0342200 | Msa0796590 | 0.824035 | 1.003937e-53 | -8.615850e-47 |
| Msa0344070 | Msa0796590 | 0.806504 | 7.967725e-50 | -8.615850e-47 |
| Msa0357380 | Msa0796590 | 0.809708 | 1.655488e-50 | -8.615850e-47 |
| Msa0357390 | Msa0796590 | 0.803989 | 2.679209e-49 | -8.615850e-47 |
| Msa0490350 | Msa0796590 | 0.800454 | 1.430490e-48 | -8.615850e-47 |
| Msa0505390 | Msa0796590 | 0.823193 | 1.580326e-53 | -8.615850e-47 |
| Msa0505660 | Msa0796590 | 0.823614 | 1.259760e-53 | -8.615850e-47 |
| Msa0508200 | Msa0796590 | 0.801900 | 7.239366e-49 | -8.615850e-47 |
| Msa0514260 | Msa0796590 | 0.808211 | 3.462344e-50 | -8.615850e-47 |
| Msa0524050 | Msa0796590 | 0.843745 | 1.159724e-58 | -8.615850e-47 |
| Msa0524090 | Msa0796590 | 0.823709 | 1.197226e-53 | -8.615850e-47 |
| Msa0524120 | Msa0796590 | 0.856886 | 2.374583e-62 | -8.615850e-47 |
| Msa0535450 | Msa0796590 | 0.826205 | 3.082768e-54 | -8.615850e-47 |
| Msa0540320 | Msa0796590 | 0.846180 | 2.553952e-59 | -8.615850e-47 |
| Msa0546380 | Msa0796590 | 0.802927 | 4.447563e-49 | -8.615850e-47 |
| Msa0546740 | Msa0796590 | 0.813797 | 2.134098e-51 | -8.615850e-47 |
| Msa0576420 | Msa0796590 | 0.815811 | 7.636556e-52 | -8.615850e-47 |
| Msa0582110 | Msa0796590 | 0.849049 | 4.149486e-60 | -8.615850e-47 |
| Msa0596100 | Msa0796590 | 0.839022 | 2.031026e-57 | -8.615850e-47 |
| Msa0598250 | Msa0796590 | 0.830708 | 2.521615e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796590 | MtrunA17_Chr5g0399691 | 93.040 | 273 | 16 | 1 | 1 | 270 | 1 | 273 | 2.82e-157 | 440 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796590 | AT4G17540.1 | 45.714 | 280 | 123 | 5 | 10 | 285 | 28 | 282 | 3.96e-65 | 206 |
Find 101 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCATTTACTTTGAAATT+TGG | 0.141463 | 5_3:-8644414 | Msa0796590:CDS |
| TGTCCAAATTTCAAAGTAAA+TGG | 0.158302 | 5_3:+8644411 | None:intergenic |
| GCATTAGATGACAGGTATTT+AGG | 0.201098 | 5_3:-8640754 | Msa0796590:three_prime_UTR |
| GTTGGAAGCCCTTTAAATTT+AGG | 0.210875 | 5_3:-8644345 | Msa0796590:intron |
| GGACAAGTATTTACTGGTTT+TGG | 0.211578 | 5_3:-8644393 | Msa0796590:CDS |
| TAAGGGAGATCTCACGGTTT+AGG | 0.233689 | 5_3:+8640894 | None:intergenic |
| AAAGTAGTACCTAAATTTAA+AGG | 0.245845 | 5_3:+8644336 | None:intergenic |
| GCTTGCACGTTATCGCTTAA+AGG | 0.246676 | 5_3:-8640923 | Msa0796590:three_prime_UTR |
| CCTATACTATATCCTGTAAT+TGG | 0.287565 | 5_3:+8640821 | None:intergenic |
| AAGGGAGATCTCACGGTTTA+GGG | 0.290126 | 5_3:+8640895 | None:intergenic |
| ATGGGTTACTTACCAATTAC+AGG | 0.311687 | 5_3:-8640833 | Msa0796590:three_prime_UTR |
| CAGTCTGAGAAATTTGATTC+TGG | 0.317467 | 5_3:-8644608 | None:intergenic |
| GCCACAGGTGCAGTCAGTTC+TGG | 0.319464 | 5_3:-8642862 | Msa0796590:CDS |
| TTCATATAGTTGAGGAAGAT+TGG | 0.320215 | 5_3:-8643949 | Msa0796590:intron |
| AAATTTGGACAAGTATTTAC+TGG | 0.322518 | 5_3:-8644399 | Msa0796590:CDS |
| CAAGTTCTTCAATCATTTGC+TGG | 0.323313 | 5_3:+8641130 | None:intergenic |
| CTACAAGTTGCCCCTGCTAA+TGG | 0.340138 | 5_3:-8640852 | Msa0796590:three_prime_UTR |
| GTTGGATGTGGAGTTGGTTT+CGG | 0.345001 | 5_3:-8643904 | Msa0796590:CDS |
| CTTGCACGTTATCGCTTAAA+GGG | 0.350496 | 5_3:-8640922 | Msa0796590:three_prime_UTR |
| ACAAAGATGATGATGAAGTT+TGG | 0.354809 | 5_3:-8642940 | Msa0796590:CDS |
| ACCCGGATTAAACGGTAAAC+TGG | 0.357165 | 5_3:+8642909 | None:intergenic |
| AGAACTAGCTTCAAGTTTGC+TGG | 0.358017 | 5_3:+8641053 | None:intergenic |
| TCCCAGTTTACCGTTTAATC+CGG | 0.367717 | 5_3:-8642911 | Msa0796590:CDS |
| TACAAGTTGCCCCTGCTAAT+GGG | 0.377837 | 5_3:-8640851 | Msa0796590:three_prime_UTR |
| TTGGTTGGAGAGGAGTAAAA+TGG | 0.387600 | 5_3:-8640648 | Msa0796590:three_prime_UTR |
| AAACTTGAAGCTAGTTCTTC+AGG | 0.400339 | 5_3:-8641048 | Msa0796590:CDS |
| AAGTAGTACCTAAATTTAAA+GGG | 0.405312 | 5_3:+8644337 | None:intergenic |
| TCAACCAATGAACATTGGTT+TGG | 0.414979 | 5_3:-8642779 | Msa0796590:CDS |
| TACATGGGCAAGGGTCTGTT+TGG | 0.419304 | 5_3:-8640667 | Msa0796590:three_prime_UTR |
| TCTGCAAAATCCACTGTTGA+AGG | 0.419732 | 5_3:-8642677 | Msa0796590:CDS |
| AAAGCCAAACCAATGTTCAT+TGG | 0.422194 | 5_3:+8642775 | None:intergenic |
| TGCACCTGTGGCACTTTGTA+AGG | 0.422373 | 5_3:+8642873 | None:intergenic |
| GTGGGTGTTGGATGTGGAGT+TGG | 0.433318 | 5_3:-8643910 | Msa0796590:CDS |
| GGCAATGCACCCGGATTAAA+CGG | 0.440473 | 5_3:+8642901 | None:intergenic |
| CATTAGCAGGGGCAACTTGT+AGG | 0.443920 | 5_3:+8640853 | None:intergenic |
| ATCAAGTTATGAGTGCTACT+AGG | 0.451482 | 5_3:-8644093 | Msa0796590:CDS |
| TTTGGAATCGGTTGTGGAGT+TGG | 0.458433 | 5_3:-8644375 | Msa0796590:CDS |
| ATGAGAGCTTACTGATTCGC+TGG | 0.460415 | 5_3:+8642639 | None:intergenic |
| TCAAGTTATGAGTGCTACTA+GGG | 0.471040 | 5_3:-8644092 | Msa0796590:CDS |
| TTGGTAAGTAACCCATTAGC+AGG | 0.472572 | 5_3:+8640840 | None:intergenic |
| TGTGGAGTTGGTTTCGGTCA+TGG | 0.472934 | 5_3:-8643898 | Msa0796590:CDS |
| ACAGGACTTGCTGTGAAACC+TGG | 0.477065 | 5_3:-8643089 | Msa0796590:intron |
| CCAATTACAGGATATAGTAT+AGG | 0.478483 | 5_3:-8640821 | Msa0796590:three_prime_UTR |
| GAATCAATGGAAGCAATTGT+TGG | 0.479648 | 5_3:+8644579 | None:intergenic |
| GTTGGTTTCGGTCATGGTGT+TGG | 0.481887 | 5_3:-8643892 | Msa0796590:CDS |
| ATTGAAGTGGGTGTTGGATG+TGG | 0.485704 | 5_3:-8643916 | Msa0796590:CDS |
| TGGAGGAAAATGAGAAGCTT+CGG | 0.486885 | 5_3:-8641107 | Msa0796590:CDS |
| CCTCCTTCTCCCTTCAACAG+TGG | 0.488432 | 5_3:+8642667 | None:intergenic |
| TGGGCAAGGGTCTGTTTGGT+TGG | 0.489899 | 5_3:-8640663 | Msa0796590:three_prime_UTR |
| AAAAGATAAGAGTAGTATTG+AGG | 0.494638 | 5_3:-8644477 | Msa0796590:five_prime_UTR |
| AAGGGTCTGTTTGGTTGGAG+AGG | 0.496557 | 5_3:-8640658 | Msa0796590:three_prime_UTR |
| ACTTCAGCCGACTCTACATA+TGG | 0.500649 | 5_3:-8642730 | Msa0796590:CDS |
| TGTGGAGTTGGTATCGGTGT+TGG | 0.502325 | 5_3:-8644363 | Msa0796590:CDS |
| TTCGGTCATGGTGTTGGAGT+TGG | 0.502955 | 5_3:-8643886 | Msa0796590:intron |
| CCCAGTTTACCGTTTAATCC+GGG | 0.504429 | 5_3:-8642910 | Msa0796590:CDS |
| TGAATTTGATTCAACACCCC+AGG | 0.508485 | 5_3:+8643071 | None:intergenic |
| ACTAATTAGCATTAGATGAC+AGG | 0.510013 | 5_3:-8640762 | Msa0796590:three_prime_UTR |
| AAGAAAACAAAGAAGAAAGT+AGG | 0.525920 | 5_3:-8640980 | Msa0796590:exon |
| CACTCAAAACAATCAGTACA+TGG | 0.527145 | 5_3:+8641006 | None:intergenic |
| CTGCAAAATCCACTGTTGAA+GGG | 0.528070 | 5_3:-8642676 | Msa0796590:CDS |
| AAGAATATTGAAGTGGGTGT+TGG | 0.528611 | 5_3:-8643922 | Msa0796590:CDS |
| ATCGGTTGTGGAGTTGGTAT+CGG | 0.538819 | 5_3:-8644369 | Msa0796590:CDS |
| ATAAGAGTAGTATTGAGGAA+TGG | 0.547460 | 5_3:-8644472 | Msa0796590:exon |
| GGTTACACAGCTTGAATCAA+TGG | 0.548648 | 5_3:+8644566 | None:intergenic |
| AGATGACAGGTATTTAGGAA+TGG | 0.555064 | 5_3:-8640749 | Msa0796590:three_prime_UTR |
| CCCGGATTAAACGGTAAACT+GGG | 0.556288 | 5_3:+8642910 | None:intergenic |
| GCAAATGATTGAAGAACTTG+TGG | 0.559081 | 5_3:-8641127 | Msa0796590:CDS |
| AAGGATGCTGGCAATGCACC+CGG | 0.560291 | 5_3:+8642892 | None:intergenic |
| CAGGACTTGCTGTGAAACCT+GGG | 0.561209 | 5_3:-8643088 | Msa0796590:CDS |
| AGAGAACAAAATACTTCAGA+TGG | 0.561726 | 5_3:-8641301 | Msa0796590:intron |
| ATAATATAGTAAAAGATACA+TGG | 0.562231 | 5_3:-8640683 | Msa0796590:three_prime_UTR |
| TAGTAAAAGATACATGGGCA+AGG | 0.571477 | 5_3:-8640677 | Msa0796590:three_prime_UTR |
| TCCAGAACTGACTGCACCTG+TGG | 0.578803 | 5_3:+8642861 | None:intergenic |
| TGGTAAGTAACCCATTAGCA+GGG | 0.583261 | 5_3:+8640841 | None:intergenic |
| CTAGCTTCAAGTTTGCTGGA+TGG | 0.583563 | 5_3:+8641057 | None:intergenic |
| TGAGAGCTTACTGATTCGCT+GGG | 0.586043 | 5_3:+8642640 | None:intergenic |
| GTGGCACTTTGTAAGGATGC+TGG | 0.588800 | 5_3:+8642880 | None:intergenic |
| AATCCACTGTTGAAGGGAGA+AGG | 0.589188 | 5_3:-8642670 | Msa0796590:CDS |
| GCATCCTTACAAAGTGCCAC+AGG | 0.589278 | 5_3:-8642877 | Msa0796590:CDS |
| TCAGCTGATCAGTTATCTCA+AGG | 0.590242 | 5_3:-8642814 | Msa0796590:intron |
| GTTGGAGAGGAGTAAAATGG+AGG | 0.596132 | 5_3:-8640645 | None:intergenic |
| ATATGGCAGTCGAACTGAGA+AGG | 0.597072 | 5_3:-8642713 | Msa0796590:CDS |
| TGGAGCTAAGAATATTGAAG+TGG | 0.597204 | 5_3:-8643929 | Msa0796590:CDS |
| CCACTGTTGAAGGGAGAAGG+AGG | 0.603974 | 5_3:-8642667 | Msa0796590:CDS |
| GGAGCTAAGAATATTGAAGT+GGG | 0.605534 | 5_3:-8643928 | Msa0796590:CDS |
| AGTAAAAGATACATGGGCAA+GGG | 0.606431 | 5_3:-8640676 | Msa0796590:three_prime_UTR |
| AATGATTGAAGAACTTGTGG+AGG | 0.616671 | 5_3:-8641124 | Msa0796590:CDS |
| TAATATAGTAAAAGATACAT+GGG | 0.620520 | 5_3:-8640682 | Msa0796590:three_prime_UTR |
| CTGTTGAAGGGAGAAGGAGG+AGG | 0.623525 | 5_3:-8642664 | Msa0796590:CDS |
| TCGACTGCCATATGTAGAGT+CGG | 0.624499 | 5_3:+8642723 | None:intergenic |
| GGGTCTCAACCAATGAACAT+TGG | 0.632984 | 5_3:-8642784 | Msa0796590:CDS |
| GCTTCGGCAGATACTAGTGA+AGG | 0.640377 | 5_3:-8641091 | Msa0796590:CDS |
| TGTTGCAGTGAGTTGAGTTG+AGG | 0.643118 | 5_3:+8644519 | None:intergenic |
| CTCATAACTTGATTCAACAT+CGG | 0.655826 | 5_3:+8644103 | None:intergenic |
| TTGCACGTTATCGCTTAAAG+GGG | 0.660290 | 5_3:-8640921 | Msa0796590:three_prime_UTR |
| AGGGAGATCTCACGGTTTAG+GGG | 0.678296 | 5_3:+8640896 | None:intergenic |
| GGTAAGTAACCCATTAGCAG+GGG | 0.690059 | 5_3:+8640842 | None:intergenic |
| AGGACTTGCTGTGAAACCTG+GGG | 0.707838 | 5_3:-8643087 | Msa0796590:CDS |
| CAAGTTATGAGTGCTACTAG+GGG | 0.719794 | 5_3:-8644091 | Msa0796590:CDS |
| ATCGTATTCGTAGAACGTGG+CGG | 0.735634 | 5_3:+8644545 | None:intergenic |
| AGCATCGTATTCGTAGAACG+TGG | 0.739027 | 5_3:+8644542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | + | chr5_3:8643796-8643815 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAGTGAAAA+AGG | + | chr5_3:8641037-8641056 | None:intergenic | 10.0% |
| !!! | AATTTTACAAAATACTATTT+TGG | + | chr5_3:8643027-8643046 | None:intergenic | 10.0% |
| !!! | TATTGTTATTTTTTTCAAAA+CGG | - | chr5_3:8643196-8643215 | Msa0796590:intron | 10.0% |
| !!! | ATTATTTCTTAATTTTTCTT+GGG | + | chr5_3:8644543-8644562 | None:intergenic | 10.0% |
| !!! | TATTATTTCTTAATTTTTCT+TGG | + | chr5_3:8644544-8644563 | None:intergenic | 10.0% |
| !!! | TTTTGAATTATTGATCATTT+AGG | - | chr5_3:8641474-8641493 | Msa0796590:intron | 15.0% |
| !!! | TTTTCTTTTATTATTATGAC+AGG | - | chr5_3:8642134-8642153 | Msa0796590:intron | 15.0% |
| !!! | TTGTTTCTTTATATACTTTT+TGG | - | chr5_3:8643641-8643660 | Msa0796590:intron | 15.0% |
| !!! | TGTTTATTTATTTTTTCCTA+TGG | - | chr5_3:8644071-8644090 | Msa0796590:CDS | 15.0% |
| !! | ATAATATAGTAAAAGATACA+TGG | - | chr5_3:8644558-8644577 | Msa0796590:five_prime_UTR | 15.0% |
| !! | TAATATAGTAAAAGATACAT+GGG | - | chr5_3:8644559-8644578 | Msa0796590:five_prime_UTR | 15.0% |
| !!! | AATCCATTTACTTTGAAATT+TGG | - | chr5_3:8640827-8640846 | Msa0796590:three_prime_UTR | 20.0% |
| !! | AAGTAGTACCTAAATTTAAA+GGG | + | chr5_3:8640907-8640926 | None:intergenic | 20.0% |
| !! | AAAGTAGTACCTAAATTTAA+AGG | + | chr5_3:8640908-8640927 | None:intergenic | 20.0% |
| !! | TTGTAACTTTAAGTGTATTT+AGG | - | chr5_3:8641447-8641466 | Msa0796590:intron | 20.0% |
| !! | TGTAACTTTAAGTGTATTTA+GGG | - | chr5_3:8641448-8641467 | Msa0796590:intron | 20.0% |
| !!! | CGAATTTTTTTAGATCATTT+AGG | - | chr5_3:8641527-8641546 | Msa0796590:intron | 20.0% |
| !!! | CATAATATTGAAAATTTTCC+AGG | - | chr5_3:8641559-8641578 | Msa0796590:intron | 20.0% |
| !!! | TCTATTCATGAGTTTTTTTT+GGG | + | chr5_3:8643050-8643069 | None:intergenic | 20.0% |
| !!! | ATCTATTCATGAGTTTTTTT+TGG | + | chr5_3:8643051-8643070 | None:intergenic | 20.0% |
| !! | TTTCAAATATCACATTTGTT+TGG | - | chr5_3:8643402-8643421 | Msa0796590:intron | 20.0% |
| !!! | TTATTTTTTCCTATGGTTAT+AGG | - | chr5_3:8644078-8644097 | Msa0796590:CDS | 20.0% |
| ! | AAAAGATAAGAGTAGTATTG+AGG | - | chr5_3:8640764-8640783 | Msa0796590:three_prime_UTR | 25.0% |
| ! | TGTCCAAATTTCAAAGTAAA+TGG | + | chr5_3:8640833-8640852 | None:intergenic | 25.0% |
| ! | AAATTTGGACAAGTATTTAC+TGG | - | chr5_3:8640842-8640861 | Msa0796590:three_prime_UTR | 25.0% |
| ! | AATCCATAGTAATGTGAAAT+TGG | + | chr5_3:8640944-8640963 | None:intergenic | 25.0% |
| ! | TTTCACATTACTATGGATTT+CGG | - | chr5_3:8640945-8640964 | Msa0796590:three_prime_UTR | 25.0% |
| ! | AAAAGGTAATAAGAGATACA+TGG | + | chr5_3:8641020-8641039 | None:intergenic | 25.0% |
| !!! | TCTTATTCTGAATTTGTTGT+AGG | - | chr5_3:8641108-8641127 | Msa0796590:CDS | 25.0% |
| !!! | ACTTGTTTTTCATATAGTTG+AGG | - | chr5_3:8641284-8641303 | Msa0796590:intron | 25.0% |
| ! | TGAATTATTGATCATTTAGG+AGG | - | chr5_3:8641477-8641496 | Msa0796590:intron | 25.0% |
| !! | AATATTGAAAATTTTCCAGG+AGG | - | chr5_3:8641562-8641581 | Msa0796590:intron | 25.0% |
| ! | ATCTATGATCTATAATACAC+AGG | + | chr5_3:8641622-8641641 | None:intergenic | 25.0% |
| ! | ATAACAGTTCATAAAGCATA+AGG | - | chr5_3:8641711-8641730 | Msa0796590:intron | 25.0% |
| ! | TAACAGTTCATAAAGCATAA+GGG | - | chr5_3:8641712-8641731 | Msa0796590:intron | 25.0% |
| !!! | GTTTTTTAATATACAGTTCG+AGG | + | chr5_3:8641833-8641852 | None:intergenic | 25.0% |
| ! | AAAGAAAATATGGAAAGGAT+GGG | + | chr5_3:8642024-8642043 | None:intergenic | 25.0% |
| ! | TAAAGAAAATATGGAAAGGA+TGG | + | chr5_3:8642025-8642044 | None:intergenic | 25.0% |
| ! | ATGAAGTGGTAAAGAAAATA+TGG | + | chr5_3:8642034-8642053 | None:intergenic | 25.0% |
| !! | ATTTTCTTTACCACTTCATA+TGG | - | chr5_3:8642035-8642054 | Msa0796590:intron | 25.0% |
| !! | TTTTCTTTACCACTTCATAT+GGG | - | chr5_3:8642036-8642055 | Msa0796590:intron | 25.0% |
| ! | TTAAACATGAGATACACAAA+AGG | + | chr5_3:8642256-8642275 | None:intergenic | 25.0% |
| ! | TAAAAAATCCTCATTCCAAA+TGG | + | chr5_3:8642841-8642860 | None:intergenic | 25.0% |
| !!! | ATTTGGAATGAGGATTTTTT+AGG | - | chr5_3:8642840-8642859 | Msa0796590:CDS | 25.0% |
| !!! | TTTGGAATGAGGATTTTTTA+GGG | - | chr5_3:8642841-8642860 | Msa0796590:CDS | 25.0% |
| ! | AAAAACTCATGAATAGATGT+TGG | - | chr5_3:8643053-8643072 | Msa0796590:intron | 25.0% |
| ! | AAAACTCATGAATAGATGTT+GGG | - | chr5_3:8643054-8643073 | Msa0796590:intron | 25.0% |
| !! | TTAAATTTTCTTGAGACAGA+GGG | + | chr5_3:8643443-8643462 | None:intergenic | 25.0% |
| ! | CTCAAGAAAATTTAAGTACA+AGG | - | chr5_3:8643448-8643467 | Msa0796590:intron | 25.0% |
| !! | TGATATTTAAGATACATTGC+AGG | - | chr5_3:8643901-8643920 | Msa0796590:CDS | 25.0% |
| ! | AAGAAAACAAAGAAGAAAGT+AGG | - | chr5_3:8644261-8644280 | Msa0796590:intron | 25.0% |
| !!! | AGATCTCCCTTAATTTTTTT+GGG | - | chr5_3:8644358-8644377 | Msa0796590:CDS | 25.0% |
| ! | ACAAGACCCAAAAAAATTAA+GGG | + | chr5_3:8644367-8644386 | None:intergenic | 25.0% |
| ! | AACAAGACCCAAAAAAATTA+AGG | + | chr5_3:8644368-8644387 | None:intergenic | 25.0% |
| ! | ATAAGAGTAGTATTGAGGAA+TGG | - | chr5_3:8640769-8640788 | Msa0796590:three_prime_UTR | 30.0% |
| GGAATGGAAAACAAAAATGA+AGG | - | chr5_3:8640785-8640804 | Msa0796590:three_prime_UTR | 30.0% | |
| !!! | GTATTTACTGGTTTTGGAAT+CGG | - | chr5_3:8640854-8640873 | Msa0796590:three_prime_UTR | 30.0% |
| GTGAAATTGGAAGAAGAATA+AGG | + | chr5_3:8640931-8640950 | None:intergenic | 30.0% | |
| CTTCCAATTTCACATTACTA+TGG | - | chr5_3:8640938-8640957 | Msa0796590:three_prime_UTR | 30.0% | |
| !!! | TTTTTGAGTAGGGGAATTTT+GGG | + | chr5_3:8640997-8641016 | None:intergenic | 30.0% |
| !!! | AGATACATGGTTTTTGAGTA+GGG | + | chr5_3:8641007-8641026 | None:intergenic | 30.0% |
| CTCATAACTTGATTCAACAT+CGG | + | chr5_3:8641141-8641160 | None:intergenic | 30.0% | |
| TTCATATAGTTGAGGAAGAT+TGG | - | chr5_3:8641292-8641311 | Msa0796590:intron | 30.0% | |
| ! | TGGTTTGAAAACCATTTTCA+TGG | + | chr5_3:8641663-8641682 | None:intergenic | 30.0% |
| AACAGTTCATAAAGCATAAG+GGG | - | chr5_3:8641713-8641732 | Msa0796590:intron | 30.0% | |
| GTGGTAAAGAAAATATGGAA+AGG | + | chr5_3:8642029-8642048 | None:intergenic | 30.0% | |
| TGAAGAATGTTCACAAAACA+TGG | + | chr5_3:8642099-8642118 | None:intergenic | 30.0% | |
| ! | ACAAAGATGATGATGAAGTT+TGG | - | chr5_3:8642301-8642320 | Msa0796590:intron | 30.0% |
| CACTTTATGCTTCACATAAA+TGG | - | chr5_3:8642742-8642761 | Msa0796590:CDS | 30.0% | |
| !!! | AGGATTTTTTAGGGCTATAA+GGG | - | chr5_3:8642850-8642869 | Msa0796590:CDS | 30.0% |
| ! | GCAAGAATCAAATTTTTCCT+AGG | + | chr5_3:8642978-8642997 | None:intergenic | 30.0% |
| !!! | CATACTTTTCCAAAAGTGTT+TGG | - | chr5_3:8642997-8643016 | Msa0796590:intron | 30.0% |
| ! | TTTGGAAAACCAAACACTTT+TGG | + | chr5_3:8643009-8643028 | None:intergenic | 30.0% |
| AAACTCATGAATAGATGTTG+GGG | - | chr5_3:8643055-8643074 | Msa0796590:intron | 30.0% | |
| !!! | TTTTGGCGATAATGGAATTT+GGG | - | chr5_3:8643078-8643097 | Msa0796590:CDS | 30.0% |
| !!! | TTTTTTTCAAAACGGTATCC+TGG | - | chr5_3:8643204-8643223 | Msa0796590:intron | 30.0% |
| !!! | TTTTTTCAAAACGGTATCCT+GGG | - | chr5_3:8643205-8643224 | Msa0796590:intron | 30.0% |
| ! | TAAATTTTCTTGAGACAGAG+GGG | + | chr5_3:8643442-8643461 | None:intergenic | 30.0% |
| ! | CTTAAATTTTCTTGAGACAG+AGG | + | chr5_3:8643444-8643463 | None:intergenic | 30.0% |
| TTGTTGAGACTGGAAAAATA+TGG | - | chr5_3:8643500-8643519 | Msa0796590:intron | 30.0% | |
| !! | TACTTTTTGGTGATTAACTG+TGG | - | chr5_3:8643654-8643673 | Msa0796590:intron | 30.0% |
| AGAGAACAAAATACTTCAGA+TGG | - | chr5_3:8643940-8643959 | Msa0796590:CDS | 30.0% | |
| GTTTCAAAACCTATAACCAT+AGG | + | chr5_3:8644090-8644109 | None:intergenic | 30.0% | |
| AAAAATTAAGGGAGATCTCA+CGG | + | chr5_3:8644356-8644375 | None:intergenic | 30.0% | |
| !!! | GAGATCTCCCTTAATTTTTT+TGG | - | chr5_3:8644357-8644376 | Msa0796590:CDS | 30.0% |
| CCTATACTATATCCTGTAAT+TGG | + | chr5_3:8644423-8644442 | None:intergenic | 30.0% | |
| CCAATTACAGGATATAGTAT+AGG | - | chr5_3:8644420-8644439 | Msa0796590:CDS | 30.0% | |
| ACTAATTAGCATTAGATGAC+AGG | - | chr5_3:8644479-8644498 | Msa0796590:five_prime_UTR | 30.0% | |
| GAATCAATGGAAGCAATTGT+TGG | + | chr5_3:8640665-8640684 | None:intergenic | 35.0% | |
| !!! | GGACAAGTATTTACTGGTTT+TGG | - | chr5_3:8640848-8640867 | Msa0796590:three_prime_UTR | 35.0% |
| GTTGGAAGCCCTTTAAATTT+AGG | - | chr5_3:8640896-8640915 | Msa0796590:three_prime_UTR | 35.0% | |
| !! | TTTTGAGTAGGGGAATTTTG+GGG | + | chr5_3:8640996-8641015 | None:intergenic | 35.0% |
| !!! | GTTTTTGAGTAGGGGAATTT+TGG | + | chr5_3:8640998-8641017 | None:intergenic | 35.0% |
| !!! | GATACATGGTTTTTGAGTAG+GGG | + | chr5_3:8641006-8641025 | None:intergenic | 35.0% |
| !!! | GAGATACATGGTTTTTGAGT+AGG | + | chr5_3:8641008-8641027 | None:intergenic | 35.0% |
| ! | ATCAAGTTATGAGTGCTACT+AGG | - | chr5_3:8641148-8641167 | Msa0796590:intron | 35.0% |
| ! | TCAAGTTATGAGTGCTACTA+GGG | - | chr5_3:8641149-8641168 | Msa0796590:intron | 35.0% |
| TGGAGCTAAGAATATTGAAG+TGG | - | chr5_3:8641312-8641331 | Msa0796590:CDS | 35.0% | |
| GGAGCTAAGAATATTGAAGT+GGG | - | chr5_3:8641313-8641332 | Msa0796590:CDS | 35.0% | |
| AAGAATATTGAAGTGGGTGT+TGG | - | chr5_3:8641319-8641338 | Msa0796590:CDS | 35.0% | |
| ! | TTGAAAATTTTCCAGGAGGT+AGG | - | chr5_3:8641566-8641585 | Msa0796590:intron | 35.0% |
| AGTTATGCACTCCATGAAAA+TGG | - | chr5_3:8641649-8641668 | Msa0796590:intron | 35.0% | |
| ! | AAATGGTTTTCAAACCACCT+CGG | - | chr5_3:8641666-8641685 | Msa0796590:intron | 35.0% |
| TTGAAGCAGAAGATGTTGTT+AGG | - | chr5_3:8641905-8641924 | Msa0796590:intron | 35.0% | |
| TGAAGCAGAAGATGTTGTTA+GGG | - | chr5_3:8641906-8641925 | Msa0796590:intron | 35.0% | |
| AAATATGGAAAGGATGGGAT+AGG | + | chr5_3:8642019-8642038 | None:intergenic | 35.0% | |
| CATCTTTGTCATTGTCATCT+AGG | + | chr5_3:8642290-8642309 | None:intergenic | 35.0% | |
| AGTTATCTCAAGGTCTAGTA+GGG | - | chr5_3:8642437-8642456 | Msa0796590:intron | 35.0% | |
| ! | TCAACCAATGAACATTGGTT+TGG | - | chr5_3:8642462-8642481 | Msa0796590:intron | 35.0% |
| AAAGCCAAACCAATGTTCAT+TGG | + | chr5_3:8642469-8642488 | None:intergenic | 35.0% | |
| GCTTCAATGATCAGAAGAAA+AGG | + | chr5_3:8642664-8642683 | None:intergenic | 35.0% | |
| !! | ACCATTTTCCATTTGGAATG+AGG | - | chr5_3:8642830-8642849 | Msa0796590:CDS | 35.0% |
| TCCTCATTCCAAATGGAAAA+TGG | + | chr5_3:8642834-8642853 | None:intergenic | 35.0% | |
| !!! | GAGGATTTTTTAGGGCTATA+AGG | - | chr5_3:8642849-8642868 | Msa0796590:CDS | 35.0% |
| !!! | ATTTTTTAGGGCTATAAGGG+AGG | - | chr5_3:8642853-8642872 | Msa0796590:CDS | 35.0% |
| ! | ATGAATAGATGTTGGGGTTT+TGG | - | chr5_3:8643061-8643080 | Msa0796590:CDS | 35.0% |
| !!! | GTTTTGGCGATAATGGAATT+TGG | - | chr5_3:8643077-8643096 | Msa0796590:CDS | 35.0% |
| ! | AATGTTCGCGTATTGTTTTC+AGG | + | chr5_3:8643341-8643360 | None:intergenic | 35.0% |
| GCTGTTTAAATTGTTGAGAC+TGG | - | chr5_3:8643490-8643509 | Msa0796590:intron | 35.0% | |
| AAATATGGTTATCTGCTGAG+AGG | - | chr5_3:8643515-8643534 | Msa0796590:intron | 35.0% | |
| ! | CTGTGTGACAATTTTAAACG+AGG | - | chr5_3:8643606-8643625 | Msa0796590:intron | 35.0% |
| TGGTGATTAACTGTGGTATT+TGG | - | chr5_3:8643661-8643680 | Msa0796590:intron | 35.0% | |
| GGTGATTAACTGTGGTATTT+GGG | - | chr5_3:8643662-8643681 | Msa0796590:intron | 35.0% | |
| CAGAAAAAACTCACGAAAGA+GGG | + | chr5_3:8643855-8643874 | None:intergenic | 35.0% | |
| TCAGAAAAAACTCACGAAAG+AGG | + | chr5_3:8643856-8643875 | None:intergenic | 35.0% | |
| ! | ATTTAAGATACATTGCAGGC+TGG | - | chr5_3:8643905-8643924 | Msa0796590:CDS | 35.0% |
| !!! | CTTGTTGATTTTTTTTGCGC+TGG | - | chr5_3:8644025-8644044 | Msa0796590:intron | 35.0% |
| CAAGTTCTTCAATCATTTGC+TGG | + | chr5_3:8644114-8644133 | None:intergenic | 35.0% | |
| GCAAATGATTGAAGAACTTG+TGG | - | chr5_3:8644114-8644133 | Msa0796590:CDS | 35.0% | |
| AATGATTGAAGAACTTGTGG+AGG | - | chr5_3:8644117-8644136 | Msa0796590:intron | 35.0% | |
| ! | AAACTTGAAGCTAGTTCTTC+AGG | - | chr5_3:8644193-8644212 | Msa0796590:intron | 35.0% |
| CACTCAAAACAATCAGTACA+TGG | + | chr5_3:8644238-8644257 | None:intergenic | 35.0% | |
| ! | ATGGGTTACTTACCAATTAC+AGG | - | chr5_3:8644408-8644427 | Msa0796590:CDS | 35.0% |
| GCATTAGATGACAGGTATTT+AGG | - | chr5_3:8644487-8644506 | Msa0796590:five_prime_UTR | 35.0% | |
| AGATGACAGGTATTTAGGAA+TGG | - | chr5_3:8644492-8644511 | Msa0796590:five_prime_UTR | 35.0% | |
| TAGTAAAAGATACATGGGCA+AGG | - | chr5_3:8644564-8644583 | Msa0796590:five_prime_UTR | 35.0% | |
| AGTAAAAGATACATGGGCAA+GGG | - | chr5_3:8644565-8644584 | Msa0796590:five_prime_UTR | 35.0% | |
| GGTTACACAGCTTGAATCAA+TGG | + | chr5_3:8640678-8640697 | None:intergenic | 40.0% | |
| ! | CAAGTTATGAGTGCTACTAG+GGG | - | chr5_3:8641150-8641169 | Msa0796590:intron | 40.0% |
| !! | ATGCATTTTCTGGTGTTAGC+AGG | - | chr5_3:8641181-8641200 | Msa0796590:intron | 40.0% |
| ! | CAAGCCTTATCGCTTTAAGT+GGG | - | chr5_3:8641768-8641787 | Msa0796590:intron | 40.0% |
| ! | AAGCCTTATCGCTTTAAGTG+GGG | - | chr5_3:8641769-8641788 | Msa0796590:intron | 40.0% |
| TCTGCAGTATCCAGAGATTT+AGG | + | chr5_3:8641950-8641969 | None:intergenic | 40.0% | |
| TCTTTACCACTTCATATGGG+TGG | - | chr5_3:8642039-8642058 | Msa0796590:intron | 40.0% | |
| CATAATCCACCCATATGAAG+TGG | + | chr5_3:8642048-8642067 | None:intergenic | 40.0% | |
| TGAATTTGATTCAACACCCC+AGG | + | chr5_3:8642173-8642192 | None:intergenic | 40.0% | |
| TCCCAGTTTACCGTTTAATC+CGG | - | chr5_3:8642330-8642349 | Msa0796590:intron | 40.0% | |
| TCAGCTGATCAGTTATCTCA+AGG | - | chr5_3:8642427-8642446 | Msa0796590:intron | 40.0% | |
| CAGTTATCTCAAGGTCTAGT+AGG | - | chr5_3:8642436-8642455 | Msa0796590:intron | 40.0% | |
| TCTGCAAAATCCACTGTTGA+AGG | - | chr5_3:8642564-8642583 | Msa0796590:intron | 40.0% | |
| CTGCAAAATCCACTGTTGAA+GGG | - | chr5_3:8642565-8642584 | Msa0796590:intron | 40.0% | |
| ! | TGCTGAGACCATTTTCCATT+TGG | - | chr5_3:8642823-8642842 | Msa0796590:CDS | 40.0% |
| GAGAAGGTAGGCTAAAATTC+AGG | - | chr5_3:8642904-8642923 | Msa0796590:CDS | 40.0% | |
| !! | GTGCCATTTGACTTGTATCA+CGG | - | chr5_3:8642950-8642969 | Msa0796590:CDS | 40.0% |
| !! | ATGAGTTGGTCATGTTGGTT+GGG | - | chr5_3:8643170-8643189 | Msa0796590:intron | 40.0% |
| !!! | CTTGGTTTTTGGCCAAAACA+GGG | - | chr5_3:8643259-8643278 | Msa0796590:intron | 40.0% |
| !!! | TTGGTTTTTGGCCAAAACAG+GGG | - | chr5_3:8643260-8643279 | Msa0796590:intron | 40.0% |
| AAAAACTCACGAAAGAGGGA+AGG | + | chr5_3:8643851-8643870 | None:intergenic | 40.0% | |
| TTCCAAGTCTATCAGTGTTG+AGG | + | chr5_3:8643982-8644001 | None:intergenic | 40.0% | |
| TGGAGGAAAATGAGAAGCTT+CGG | - | chr5_3:8644134-8644153 | Msa0796590:intron | 40.0% | |
| ! | AGAACTAGCTTCAAGTTTGC+TGG | + | chr5_3:8644191-8644210 | None:intergenic | 40.0% |
| CTTGCACGTTATCGCTTAAA+GGG | - | chr5_3:8644319-8644338 | Msa0796590:intron | 40.0% | |
| TTGCACGTTATCGCTTAAAG+GGG | - | chr5_3:8644320-8644339 | Msa0796590:intron | 40.0% | |
| TGGTAAGTAACCCATTAGCA+GGG | + | chr5_3:8644403-8644422 | None:intergenic | 40.0% | |
| TTGGTAAGTAACCCATTAGC+AGG | + | chr5_3:8644404-8644423 | None:intergenic | 40.0% | |
| ATCGTATTCGTAGAACGTGG+CGG | + | chr5_3:8640699-8640718 | None:intergenic | 45.0% | |
| AGCATCGTATTCGTAGAACG+TGG | + | chr5_3:8640702-8640721 | None:intergenic | 45.0% | |
| ! | TGTTGCAGTGAGTTGAGTTG+AGG | + | chr5_3:8640725-8640744 | None:intergenic | 45.0% |
| !!! | ACTGGTTTTGGAATCGGTTG+TGG | - | chr5_3:8640860-8640879 | Msa0796590:three_prime_UTR | 45.0% |
| ! | TTTGGAATCGGTTGTGGAGT+TGG | - | chr5_3:8640866-8640885 | Msa0796590:three_prime_UTR | 45.0% |
| !! | ATCGGTTGTGGAGTTGGTAT+CGG | - | chr5_3:8640872-8640891 | Msa0796590:three_prime_UTR | 45.0% |
| !! | GGGGAATTTTGGGGAGATTT+GGG | + | chr5_3:8640987-8641006 | None:intergenic | 45.0% |
| !! | AGGGGAATTTTGGGGAGATT+TGG | + | chr5_3:8640988-8641007 | None:intergenic | 45.0% |
| ! | GGTGCAACTGATGCATTTTC+TGG | - | chr5_3:8641171-8641190 | Msa0796590:intron | 45.0% |
| !! | ATTGAAGTGGGTGTTGGATG+TGG | - | chr5_3:8641325-8641344 | Msa0796590:intron | 45.0% |
| ! | GTTGGATGTGGAGTTGGTTT+CGG | - | chr5_3:8641337-8641356 | Msa0796590:intron | 45.0% |
| ! | TTCCAGGAGGTAGGTTTTTG+TGG | - | chr5_3:8641575-8641594 | Msa0796590:intron | 45.0% |
| TTCCACAAAAACCTACCTCC+TGG | + | chr5_3:8641580-8641599 | None:intergenic | 45.0% | |
| CCACTTAAAGCGATAAGGCT+TGG | + | chr5_3:8641770-8641789 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCGCTTTAAG+TGG | - | chr5_3:8641767-8641786 | Msa0796590:intron | 45.0% |
| ! | CTTATCGCTTTAAGTGGGGT+CGG | - | chr5_3:8641773-8641792 | Msa0796590:intron | 45.0% |
| GTTCGAGGCATAGAACACTA+TGG | + | chr5_3:8641818-8641837 | None:intergenic | 45.0% | |
| CCCGGATTAAACGGTAAACT+GGG | + | chr5_3:8642334-8642353 | None:intergenic | 45.0% | |
| CCCAGTTTACCGTTTAATCC+GGG | - | chr5_3:8642331-8642350 | Msa0796590:intron | 45.0% | |
| ACCCGGATTAAACGGTAAAC+TGG | + | chr5_3:8642335-8642354 | None:intergenic | 45.0% | |
| GGGTCTCAACCAATGAACAT+TGG | - | chr5_3:8642457-8642476 | Msa0796590:intron | 45.0% | |
| !! | GTCGGCTGAAGTGTCTTTTA+TGG | + | chr5_3:8642503-8642522 | None:intergenic | 45.0% |
| ! | ACTTCAGCCGACTCTACATA+TGG | - | chr5_3:8642511-8642530 | Msa0796590:intron | 45.0% |
| TCGACTGCCATATGTAGAGT+CGG | + | chr5_3:8642521-8642540 | None:intergenic | 45.0% | |
| ATATGGCAGTCGAACTGAGA+AGG | - | chr5_3:8642528-8642547 | Msa0796590:intron | 45.0% | |
| AATCCACTGTTGAAGGGAGA+AGG | - | chr5_3:8642571-8642590 | Msa0796590:intron | 45.0% | |
| !! | TGAGAGCTTACTGATTCGCT+GGG | + | chr5_3:8642604-8642623 | None:intergenic | 45.0% |
| !! | ATGAGAGCTTACTGATTCGC+TGG | + | chr5_3:8642605-8642624 | None:intergenic | 45.0% |
| TAGTGTGGAGATGAGAAGGT+AGG | - | chr5_3:8642892-8642911 | Msa0796590:CDS | 45.0% | |
| TCAAATGGCACAAAGCCCTT+TGG | + | chr5_3:8642941-8642960 | None:intergenic | 45.0% | |
| GAGCCGTGATACAAGTCAAA+TGG | + | chr5_3:8642956-8642975 | None:intergenic | 45.0% | |
| !! | TGTTGGGGTTTTGGCGATAA+TGG | - | chr5_3:8643070-8643089 | Msa0796590:CDS | 45.0% |
| !! | TACTGGTATGGTGGGTAGAA+AGG | - | chr5_3:8643143-8643162 | Msa0796590:intron | 45.0% |
| GGTAGAAAGGATGGATGAGT+TGG | - | chr5_3:8643156-8643175 | Msa0796590:intron | 45.0% | |
| !! | GATGGATGAGTTGGTCATGT+TGG | - | chr5_3:8643165-8643184 | Msa0796590:intron | 45.0% |
| !! | GATGAGTTGGTCATGTTGGT+TGG | - | chr5_3:8643169-8643188 | Msa0796590:intron | 45.0% |
| ! | TGGGGTTTTCTTTAACACCC+AGG | + | chr5_3:8643225-8643244 | None:intergenic | 45.0% |
| !! | CTCCCTATGAGCTTGGTTTT+TGG | - | chr5_3:8643248-8643267 | Msa0796590:intron | 45.0% |
| GGCCAAAAACCAAGCTCATA+GGG | + | chr5_3:8643253-8643272 | None:intergenic | 45.0% | |
| TGGCCAAAAACCAAGCTCAT+AGG | + | chr5_3:8643254-8643273 | None:intergenic | 45.0% | |
| !!! | GCTTGGTTTTTGGCCAAAAC+AGG | - | chr5_3:8643258-8643277 | Msa0796590:intron | 45.0% |
| ! | GATGCAACATTCCCCTGTTT+TGG | + | chr5_3:8643274-8643293 | None:intergenic | 45.0% |
| TAACAACAGACGATGCCTAC+AGG | + | chr5_3:8643584-8643603 | None:intergenic | 45.0% | |
| GTCCTCAACACTGATAGACT+TGG | - | chr5_3:8643977-8643996 | Msa0796590:intron | 45.0% | |
| !! | CTAGCTTCAAGTTTGCTGGA+TGG | + | chr5_3:8644187-8644206 | None:intergenic | 45.0% |
| GCTTGCACGTTATCGCTTAA+AGG | - | chr5_3:8644318-8644337 | Msa0796590:intron | 45.0% | |
| AAGGGAGATCTCACGGTTTA+GGG | + | chr5_3:8644349-8644368 | None:intergenic | 45.0% | |
| TAAGGGAGATCTCACGGTTT+AGG | + | chr5_3:8644350-8644369 | None:intergenic | 45.0% | |
| TACAAGTTGCCCCTGCTAAT+GGG | - | chr5_3:8644390-8644409 | Msa0796590:CDS | 45.0% | |
| GGTAAGTAACCCATTAGCAG+GGG | + | chr5_3:8644402-8644421 | None:intergenic | 45.0% | |
| !! | TGTGGAGTTGGTATCGGTGT+TGG | - | chr5_3:8640878-8640897 | Msa0796590:three_prime_UTR | 50.0% |
| ! | TGTGGAGTTGGTTTCGGTCA+TGG | - | chr5_3:8641343-8641362 | Msa0796590:intron | 50.0% |
| ! | GTTGGTTTCGGTCATGGTGT+TGG | - | chr5_3:8641349-8641368 | Msa0796590:intron | 50.0% |
| ! | TTCGGTCATGGTGTTGGAGT+TGG | - | chr5_3:8641355-8641374 | Msa0796590:intron | 50.0% |
| ! | TTTTCAAACCACCTCGGCAC+TGG | - | chr5_3:8641672-8641691 | Msa0796590:intron | 50.0% |
| CGACCCCACTTAAAGCGATA+AGG | + | chr5_3:8641775-8641794 | None:intergenic | 50.0% | |
| TTTAAGTGGGGTCGGCTACA+AGG | - | chr5_3:8641781-8641800 | Msa0796590:intron | 50.0% | |
| !! | ACAGGACTTGCTGTGAAACC+TGG | - | chr5_3:8642152-8642171 | Msa0796590:intron | 50.0% |
| !! | CAGGACTTGCTGTGAAACCT+GGG | - | chr5_3:8642153-8642172 | Msa0796590:intron | 50.0% |
| !! | AGGACTTGCTGTGAAACCTG+GGG | - | chr5_3:8642154-8642173 | Msa0796590:intron | 50.0% |
| GGCAATGCACCCGGATTAAA+CGG | + | chr5_3:8642343-8642362 | None:intergenic | 50.0% | |
| GTGGCACTTTGTAAGGATGC+TGG | + | chr5_3:8642364-8642383 | None:intergenic | 50.0% | |
| ! | GCATCCTTACAAAGTGCCAC+AGG | - | chr5_3:8642364-8642383 | Msa0796590:intron | 50.0% |
| TGCACCTGTGGCACTTTGTA+AGG | + | chr5_3:8642371-8642390 | None:intergenic | 50.0% | |
| ! | CCACACTACGAGTTGGAACT+TGG | + | chr5_3:8642880-8642899 | None:intergenic | 50.0% |
| CCAAGTTCCAACTCGTAGTG+TGG | - | chr5_3:8642877-8642896 | Msa0796590:CDS | 50.0% | |
| CTCATCTCCACACTACGAGT+TGG | + | chr5_3:8642887-8642906 | None:intergenic | 50.0% | |
| CTCGTAGTGTGGAGATGAGA+AGG | - | chr5_3:8642888-8642907 | Msa0796590:CDS | 50.0% | |
| TCAGGCAAAGTAGCCTCCAA+AGG | - | chr5_3:8642922-8642941 | Msa0796590:CDS | 50.0% | |
| CAGGCAAAGTAGCCTCCAAA+GGG | - | chr5_3:8642923-8642942 | Msa0796590:CDS | 50.0% | |
| AATGGCACAAAGCCCTTTGG+AGG | + | chr5_3:8642938-8642957 | None:intergenic | 50.0% | |
| ! | TGACTTGTATCACGGCTCCT+AGG | - | chr5_3:8642958-8642977 | Msa0796590:intron | 50.0% |
| CACCACAATAGCAGCCATTG+CGG | + | chr5_3:8643119-8643138 | None:intergenic | 50.0% | |
| !! | TGCTATTGTGGTGGTGCTAC+TGG | - | chr5_3:8643126-8643145 | Msa0796590:intron | 50.0% |
| !! | TTGTGGTGGTGCTACTGGTA+TGG | - | chr5_3:8643131-8643150 | Msa0796590:intron | 50.0% |
| !! | GGTATGGTGGGTAGAAAGGA+TGG | - | chr5_3:8643147-8643166 | Msa0796590:intron | 50.0% |
| CAAGCTCATAGGGAGAGATG+GGG | + | chr5_3:8643243-8643262 | None:intergenic | 50.0% | |
| CCAAGCTCATAGGGAGAGAT+GGG | + | chr5_3:8643244-8643263 | None:intergenic | 50.0% | |
| ACCAAGCTCATAGGGAGAGA+TGG | + | chr5_3:8643245-8643264 | None:intergenic | 50.0% | |
| TGCACATGTCCTCTTCCTGT+AGG | - | chr5_3:8643566-8643585 | Msa0796590:intron | 50.0% | |
| ACTCACGAAAGAGGGAAGGT+GGG | + | chr5_3:8643847-8643866 | None:intergenic | 50.0% | |
| AACTCACGAAAGAGGGAAGG+TGG | + | chr5_3:8643848-8643867 | None:intergenic | 50.0% | |
| GCTTCGGCAGATACTAGTGA+AGG | - | chr5_3:8644150-8644169 | Msa0796590:intron | 50.0% | |
| AGGGAGATCTCACGGTTTAG+GGG | + | chr5_3:8644348-8644367 | None:intergenic | 50.0% | |
| CATTAGCAGGGGCAACTTGT+AGG | + | chr5_3:8644391-8644410 | None:intergenic | 50.0% | |
| CTACAAGTTGCCCCTGCTAA+TGG | - | chr5_3:8644389-8644408 | Msa0796590:CDS | 50.0% | |
| TACATGGGCAAGGGTCTGTT+TGG | - | chr5_3:8644574-8644593 | Msa0796590:five_prime_UTR | 50.0% | |
| AAGGGTCTGTTTGGTTGGAG+AGG | - | chr5_3:8644583-8644602 | Msa0796590:five_prime_UTR | 50.0% | |
| !! | GTGGGTGTTGGATGTGGAGT+TGG | - | chr5_3:8641331-8641350 | Msa0796590:intron | 55.0% |
| AATTGTAGCCTCCAGTGCCG+AGG | + | chr5_3:8641686-8641705 | None:intergenic | 55.0% | |
| ! | TTGTTAGGGTGCCACAACCG+CGG | - | chr5_3:8641920-8641939 | Msa0796590:intron | 55.0% |
| ATTTAGGCATGCCGCGGTTG+TGG | + | chr5_3:8641934-8641953 | None:intergenic | 55.0% | |
| CCAGAGATTTAGGCATGCCG+CGG | + | chr5_3:8641940-8641959 | None:intergenic | 55.0% | |
| AAGGATGCTGGCAATGCACC+CGG | + | chr5_3:8642352-8642371 | None:intergenic | 55.0% | |
| TCCAGAACTGACTGCACCTG+TGG | + | chr5_3:8642383-8642402 | None:intergenic | 55.0% | |
| CCTCCTTCTCCCTTCAACAG+TGG | + | chr5_3:8642577-8642596 | None:intergenic | 55.0% | |
| CCACTGTTGAAGGGAGAAGG+AGG | - | chr5_3:8642574-8642593 | Msa0796590:intron | 55.0% | |
| CTGTTGAAGGGAGAAGGAGG+AGG | - | chr5_3:8642577-8642596 | Msa0796590:intron | 55.0% | |
| ACAGCAATCGCAAGCCGCAA+TGG | - | chr5_3:8643102-8643121 | Msa0796590:intron | 55.0% | |
| AGCCGCAATGGCTGCTATTG+TGG | - | chr5_3:8643114-8643133 | Msa0796590:intron | 55.0% | |
| CGCAATGGCTGCTATTGTGG+TGG | - | chr5_3:8643117-8643136 | Msa0796590:intron | 55.0% | |
| !! | TGGTGGTGCTACTGGTATGG+TGG | - | chr5_3:8643134-8643153 | Msa0796590:intron | 55.0% |
| !! | GGTGGTGCTACTGGTATGGT+GGG | - | chr5_3:8643135-8643154 | Msa0796590:intron | 55.0% |
| CCCATCTCTCCCTATGAGCT+TGG | - | chr5_3:8643241-8643260 | Msa0796590:intron | 55.0% | |
| CAGACGATGCCTACAGGAAG+AGG | + | chr5_3:8643578-8643597 | None:intergenic | 55.0% | |
| CTCACGAAAGAGGGAAGGTG+GGG | + | chr5_3:8643846-8643865 | None:intergenic | 55.0% | |
| TGGGCAAGGGTCTGTTTGGT+TGG | - | chr5_3:8644578-8644597 | Msa0796590:five_prime_UTR | 55.0% | |
| ! | TCAAACCACCTCGGCACTGG+AGG | - | chr5_3:8641675-8641694 | Msa0796590:intron | 60.0% |
| CCGCGGCATGCCTAAATCTC+TGG | - | chr5_3:8641937-8641956 | Msa0796590:intron | 60.0% | |
| GCCACAGGTGCAGTCAGTTC+TGG | - | chr5_3:8642379-8642398 | Msa0796590:intron | 60.0% | |
| ! | TGTAGCCTCCAGTGCCGAGG+TGG | + | chr5_3:8641683-8641702 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 8640648 | 8644615 | 8640648 | ID=Msa0796590;Name=Msa0796590 |
| chr5_3 | mRNA | 8640648 | 8644615 | 8640648 | ID=Msa0796590-mRNA-1;Parent=Msa0796590;Name=Msa0796590-mRNA-1;_AED=0.18;_eAED=0.18;_QI=140|0.85|0.75|1|0.71|0.75|8|333|292 |
| chr5_3 | exon | 8640648 | 8641163 | 8640648 | ID=Msa0796590-mRNA-1:exon:3677;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8641302 | 8641340 | 8641302 | ID=Msa0796590-mRNA-1:exon:3676;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8642651 | 8642805 | 8642651 | ID=Msa0796590-mRNA-1:exon:3675;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8642815 | 8642971 | 8642815 | ID=Msa0796590-mRNA-1:exon:3674;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8643058 | 8643107 | 8643058 | ID=Msa0796590-mRNA-1:exon:3673;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8643887 | 8643962 | 8643887 | ID=Msa0796590-mRNA-1:exon:3672;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8644045 | 8644133 | 8644045 | ID=Msa0796590-mRNA-1:exon:3671;Parent=Msa0796590-mRNA-1 |
| chr5_3 | exon | 8644346 | 8644615 | 8644346 | ID=Msa0796590-mRNA-1:exon:3670;Parent=Msa0796590-mRNA-1 |
| chr5_3 | five_prime_UTR | 8644476 | 8644615 | 8644476 | ID=Msa0796590-mRNA-1:five_prime_utr;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8644346 | 8644475 | 8644346 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8644045 | 8644133 | 8644045 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8643887 | 8643962 | 8643887 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8643058 | 8643107 | 8643058 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8642815 | 8642971 | 8642815 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8642651 | 8642805 | 8642651 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8641302 | 8641340 | 8641302 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | CDS | 8640981 | 8641163 | 8640981 | ID=Msa0796590-mRNA-1:cds;Parent=Msa0796590-mRNA-1 |
| chr5_3 | three_prime_UTR | 8640648 | 8640980 | 8640648 | ID=Msa0796590-mRNA-1:three_prime_utr;Parent=Msa0796590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
