Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796810 | XP_013453441.1 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 1.43e-170 | 484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796810 | A0A072UNQ3 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 6.84e-171 | 484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0796810 | 0.817975 | 2.495376e-52 | -8.615850e-47 |
| Msa0008850 | Msa0796810 | 0.847000 | 1.524843e-59 | -8.615850e-47 |
| Msa0017120 | Msa0796810 | 0.833183 | 6.172742e-56 | -8.615850e-47 |
| Msa0020630 | Msa0796810 | 0.802748 | 4.842798e-49 | -8.615850e-47 |
| Msa0024680 | Msa0796810 | 0.800003 | 1.766961e-48 | -8.615850e-47 |
| Msa0027540 | Msa0796810 | 0.833432 | 5.351419e-56 | -8.615850e-47 |
| Msa0030000 | Msa0796810 | 0.824499 | 7.807537e-54 | -8.615850e-47 |
| Msa0030730 | Msa0796810 | 0.809877 | 1.522629e-50 | -8.615850e-47 |
| Msa0038310 | Msa0796810 | 0.805387 | 1.368428e-49 | -8.615850e-47 |
| Msa0057260 | Msa0796810 | 0.810061 | 1.389640e-50 | -8.615850e-47 |
| Msa0060600 | Msa0796810 | 0.801243 | 9.872940e-49 | -8.615850e-47 |
| Msa0065390 | Msa0796810 | 0.824890 | 6.316505e-54 | -8.615850e-47 |
| Msa0075310 | Msa0796810 | 0.830763 | 2.444881e-55 | -8.615850e-47 |
| Msa0079250 | Msa0796810 | 0.812301 | 4.541032e-51 | -8.615850e-47 |
| Msa0084680 | Msa0796810 | 0.818528 | 1.869830e-52 | -8.615850e-47 |
| Msa0087110 | Msa0796810 | 0.808704 | 2.717850e-50 | -8.615850e-47 |
| Msa0105340 | Msa0796810 | 0.801381 | 9.250420e-49 | -8.615850e-47 |
| Msa0110710 | Msa0796810 | 0.830599 | 2.682460e-55 | -8.615850e-47 |
| Msa0605620 | Msa0796810 | 0.810588 | 1.069752e-50 | -8.615850e-47 |
| Msa0606060 | Msa0796810 | 0.836758 | 7.754622e-57 | -8.615850e-47 |
| Msa0614230 | Msa0796810 | 0.805988 | 1.023133e-49 | -8.615850e-47 |
| Msa0619330 | Msa0796810 | 0.822916 | 1.833461e-53 | -8.615850e-47 |
| Msa0624730 | Msa0796810 | 0.820740 | 5.845562e-53 | -8.615850e-47 |
| Msa0631840 | Msa0796810 | 0.835883 | 1.294507e-56 | -8.615850e-47 |
| Msa0640880 | Msa0796810 | 0.805803 | 1.119159e-49 | -8.615850e-47 |
| Msa0647000 | Msa0796810 | 0.832830 | 7.557904e-56 | -8.615850e-47 |
| Msa0650650 | Msa0796810 | 0.808507 | 2.993571e-50 | -8.615850e-47 |
| Msa0650740 | Msa0796810 | 0.801536 | 8.595809e-49 | -8.615850e-47 |
| Msa0654060 | Msa0796810 | 0.800657 | 1.300699e-48 | -8.615850e-47 |
| Msa0667220 | Msa0796810 | 0.809683 | 1.676267e-50 | -8.615850e-47 |
| Msa0674220 | Msa0796810 | 0.819827 | 9.464994e-53 | -8.615850e-47 |
| Msa0674300 | Msa0796810 | 0.804950 | 1.688544e-49 | -8.615850e-47 |
| Msa0681890 | Msa0796810 | 0.835276 | 1.843678e-56 | -8.615850e-47 |
| Msa0686610 | Msa0796810 | 0.838295 | 3.130544e-57 | -8.615850e-47 |
| Msa0702070 | Msa0796810 | 0.802583 | 5.237960e-49 | -8.615850e-47 |
| Msa0707780 | Msa0796810 | 0.806646 | 7.433743e-50 | -8.615850e-47 |
| Msa0714600 | Msa0796810 | 0.812709 | 3.697969e-51 | -8.615850e-47 |
| Msa0719340 | Msa0796810 | 0.820409 | 6.963256e-53 | -8.615850e-47 |
| Msa0724050 | Msa0796810 | 0.836476 | 9.150919e-57 | -8.615850e-47 |
| Msa0726610 | Msa0796810 | 0.814594 | 1.422965e-51 | -8.615850e-47 |
| Msa0730180 | Msa0796810 | 0.815201 | 1.043753e-51 | -8.615850e-47 |
| Msa0733000 | Msa0796810 | 0.825140 | 5.514378e-54 | -8.615850e-47 |
| Msa0743640 | Msa0796810 | 0.808042 | 3.762044e-50 | -8.615850e-47 |
| Msa0754860 | Msa0796810 | 0.938872 | 3.274067e-99 | -8.615850e-47 |
| Msa0763880 | Msa0796810 | 0.830371 | 3.048754e-55 | -8.615850e-47 |
| Msa0763910 | Msa0796810 | 0.814291 | 1.660607e-51 | -8.615850e-47 |
| Msa0770430 | Msa0796810 | 0.801416 | 9.098868e-49 | -8.615850e-47 |
| Msa0772150 | Msa0796810 | 0.831104 | 2.016835e-55 | -8.615850e-47 |
| Msa0772210 | Msa0796810 | 0.814365 | 1.599209e-51 | -8.615850e-47 |
| Msa0787720 | Msa0796810 | 0.809204 | 2.124208e-50 | -8.615850e-47 |
| Msa0789270 | Msa0796810 | 0.801789 | 7.626951e-49 | -8.615850e-47 |
| Msa0789280 | Msa0796810 | 0.801635 | 8.206150e-49 | -8.615850e-47 |
| Msa0796590 | Msa0796810 | 0.904093 | 1.758867e-79 | -8.615850e-47 |
| Msa0796810 | Msa0797220 | 0.800725 | 1.259574e-48 | -8.615850e-47 |
| Msa0796810 | Msa0799710 | 0.813947 | 1.977676e-51 | -8.615850e-47 |
| Msa0796810 | Msa0811510 | 0.815692 | 8.114191e-52 | -8.615850e-47 |
| Msa0796810 | Msa0820670 | 0.809897 | 1.507894e-50 | -8.615850e-47 |
| Msa0796810 | Msa0828570 | 0.803526 | 3.342594e-49 | -8.615850e-47 |
| Msa0796810 | Msa0830720 | 0.806233 | 9.084145e-50 | -8.615850e-47 |
| Msa0796810 | Msa0833940 | 0.937765 | 2.032499e-98 | -8.615850e-47 |
| Msa0796810 | Msa0834130 | 0.904236 | 1.514553e-79 | -8.615850e-47 |
| Msa0796810 | Msa0837990 | 0.815133 | 1.080719e-51 | -8.615850e-47 |
| Msa0796810 | Msa0844100 | 0.800780 | 1.227198e-48 | -8.615850e-47 |
| Msa0796810 | Msa0851740 | 0.815781 | 7.753655e-52 | -8.615850e-47 |
| Msa0796810 | Msa0860270 | 0.810815 | 9.553539e-51 | -8.615850e-47 |
| Msa0796810 | Msa0863760 | 0.803250 | 3.813738e-49 | -8.615850e-47 |
| Msa0796810 | Msa0872660 | 0.809263 | 2.063394e-50 | -8.615850e-47 |
| Msa0796810 | Msa0890250 | 0.819660 | 1.033579e-52 | -8.615850e-47 |
| Msa0796810 | Msa0903730 | 0.803303 | 3.717631e-49 | -8.615850e-47 |
| Msa0796810 | Msa0907700 | 0.810042 | 1.403153e-50 | -8.615850e-47 |
| Msa0796810 | Msa0925160 | 0.820939 | 5.261879e-53 | -8.615850e-47 |
| Msa0796810 | Msa0930330 | 0.813823 | 2.105543e-51 | -8.615850e-47 |
| Msa0796810 | Msa0955260 | 0.812388 | 4.346503e-51 | -8.615850e-47 |
| Msa0796810 | Msa0971860 | 0.818500 | 1.897952e-52 | -8.615850e-47 |
| Msa0796810 | Msa0973230 | 0.804325 | 2.280869e-49 | -8.615850e-47 |
| Msa0796810 | Msa0990520 | 0.835323 | 1.794449e-56 | -8.615850e-47 |
| Msa0796810 | Msa0992570 | 0.800286 | 1.547871e-48 | -8.615850e-47 |
| Msa0796810 | Msa1002040 | 0.825777 | 3.896220e-54 | -8.615850e-47 |
| Msa0796810 | Msa1029320 | 0.801232 | 9.924523e-49 | -8.615850e-47 |
| Msa0796810 | Msa1038320 | 0.860949 | 1.445553e-63 | -8.615850e-47 |
| Msa0796810 | Msa1043870 | 0.807183 | 5.724955e-50 | -8.615850e-47 |
| Msa0796810 | Msa1044040 | 0.828351 | 9.436945e-55 | -8.615850e-47 |
| Msa0796810 | Msa1044340 | 0.809519 | 1.818094e-50 | -8.615850e-47 |
| Msa0796810 | Msa1089530 | 0.817036 | 4.060473e-52 | -8.615850e-47 |
| Msa0796810 | Msa1106560 | 0.802849 | 4.615168e-49 | -8.615850e-47 |
| Msa0796810 | Msa1118140 | 0.807549 | 4.787943e-50 | -8.615850e-47 |
| Msa0796810 | Msa1122510 | 0.817942 | 2.538519e-52 | -8.615850e-47 |
| Msa0796810 | Msa1133660 | 0.810988 | 8.764200e-51 | -8.615850e-47 |
| Msa0796810 | Msa1140010 | 0.810928 | 9.030308e-51 | -8.615850e-47 |
| Msa0796810 | Msa1159360 | 0.812379 | 4.367351e-51 | -8.615850e-47 |
| Msa0796810 | Msa1164800 | -0.804365 | 2.237384e-49 | -8.615850e-47 |
| Msa0796810 | Msa1166180 | 0.821247 | 4.469536e-53 | -8.615850e-47 |
| Msa0796810 | Msa1166280 | 0.816924 | 4.302625e-52 | -8.615850e-47 |
| Msa0796810 | Msa1210770 | 0.816269 | 6.032191e-52 | -8.615850e-47 |
| Msa0796810 | Msa1214900 | 0.800440 | 1.439572e-48 | -8.615850e-47 |
| Msa0796810 | Msa1220450 | -0.801360 | 9.342595e-49 | -8.615850e-47 |
| Msa0796810 | Msa1220460 | -0.800989 | 1.112284e-48 | -8.615850e-47 |
| Msa0796810 | Msa1220480 | -0.800482 | 1.411848e-48 | -8.615850e-47 |
| Msa0796810 | Msa1220740 | 0.813575 | 2.387610e-51 | -8.615850e-47 |
| Msa0796810 | Msa1222030 | -0.817181 | 3.767081e-52 | -8.615850e-47 |
| Msa0796810 | Msa1226600 | 0.818251 | 2.161049e-52 | -8.615850e-47 |
| Msa0796810 | Msa1262310 | 0.819515 | 1.115428e-52 | -8.615850e-47 |
| Msa0796810 | Msa1263030 | 0.803821 | 2.902624e-49 | -8.615850e-47 |
| Msa0796810 | Msa1265960 | 0.800177 | 1.628885e-48 | -8.615850e-47 |
| Msa0796810 | Msa1284030 | 0.804246 | 2.368555e-49 | -8.615850e-47 |
| Msa0796810 | Msa1323060 | 0.819095 | 1.390164e-52 | -8.615850e-47 |
| Msa0796810 | Msa1334650 | 0.806680 | 7.314199e-50 | -8.615850e-47 |
| Msa0796810 | Msa1341930 | 0.826836 | 2.179811e-54 | -8.615850e-47 |
| Msa0796810 | Msa1349360 | 0.800249 | 1.574484e-48 | -8.615850e-47 |
| Msa0796810 | Msa1352290 | 0.827526 | 1.489850e-54 | -8.615850e-47 |
| Msa0796810 | Msa1354040 | 0.808282 | 3.344231e-50 | -8.615850e-47 |
| Msa0796810 | Msa1355260 | 0.803753 | 2.998552e-49 | -8.615850e-47 |
| Msa0796810 | Msa1367940 | 0.811034 | 8.564249e-51 | -8.615850e-47 |
| Msa0796810 | Msa1381130 | 0.828551 | 8.443502e-55 | -8.615850e-47 |
| Msa0796810 | Msa1388040 | 0.902919 | 5.923163e-79 | -8.615850e-47 |
| Msa0796810 | Msa1397540 | 0.802966 | 4.365855e-49 | -8.615850e-47 |
| Msa0796810 | Msa1405770 | 0.823891 | 1.084771e-53 | -8.615850e-47 |
| Msa0796810 | Msa1418200 | 0.830243 | 3.277253e-55 | -8.615850e-47 |
| Msa0796810 | Msa1428420 | 0.830470 | 2.884165e-55 | -8.615850e-47 |
| Msa0796810 | Msa1435470 | 0.812332 | 4.471262e-51 | -8.615850e-47 |
| Msa0796810 | Msa1447560 | 0.839717 | 1.341039e-57 | -8.615850e-47 |
| Msa0796810 | Msa1449880 | 0.809743 | 1.626892e-50 | -8.615850e-47 |
| Msa0796810 | Msa1450020 | 0.806120 | 9.596855e-50 | -8.615850e-47 |
| Msa0796810 | Msa1456810 | 0.828266 | 9.893194e-55 | -8.615850e-47 |
| Msa0796810 | Msa1458920 | 0.827239 | 1.745845e-54 | -8.615850e-47 |
| Msa0796810 | Msa1464560 | 0.841125 | 5.743097e-58 | -8.615850e-47 |
| Msa0125230 | Msa0796810 | 0.830030 | 3.694540e-55 | -8.615850e-47 |
| Msa0135980 | Msa0796810 | 0.804960 | 1.681198e-49 | -8.615850e-47 |
| Msa0141670 | Msa0796810 | 0.820124 | 8.095531e-53 | -8.615850e-47 |
| Msa0145950 | Msa0796810 | 0.803852 | 2.860117e-49 | -8.615850e-47 |
| Msa0146470 | Msa0796810 | 0.810250 | 1.265540e-50 | -8.615850e-47 |
| Msa0149500 | Msa0796810 | 0.814106 | 1.824028e-51 | -8.615850e-47 |
| Msa0157020 | Msa0796810 | 0.801020 | 1.096502e-48 | -8.615850e-47 |
| Msa0159750 | Msa0796810 | 0.806054 | 9.907667e-50 | -8.615850e-47 |
| Msa0164360 | Msa0796810 | 0.830756 | 2.455328e-55 | -8.615850e-47 |
| Msa0168100 | Msa0796810 | 0.817991 | 2.474290e-52 | -8.615850e-47 |
| Msa0175530 | Msa0796810 | 0.801824 | 7.501860e-49 | -8.615850e-47 |
| Msa0182930 | Msa0796810 | 0.801160 | 1.026683e-48 | -8.615850e-47 |
| Msa0183610 | Msa0796810 | 0.811053 | 8.487350e-51 | -8.615850e-47 |
| Msa0183620 | Msa0796810 | 0.800565 | 1.357833e-48 | -8.615850e-47 |
| Msa0185390 | Msa0796810 | 0.833608 | 4.836257e-56 | -8.615850e-47 |
| Msa0194570 | Msa0796810 | 0.815310 | 9.873070e-52 | -8.615850e-47 |
| Msa0207000 | Msa0796810 | 0.822926 | 1.824285e-53 | -8.615850e-47 |
| Msa0217470 | Msa0796810 | 0.804459 | 2.138153e-49 | -8.615850e-47 |
| Msa0222070 | Msa0796810 | 0.825864 | 3.714621e-54 | -8.615850e-47 |
| Msa0222120 | Msa0796810 | 0.828700 | 7.771897e-55 | -8.615850e-47 |
| Msa0227490 | Msa0796810 | 0.802887 | 4.532137e-49 | -8.615850e-47 |
| Msa0227500 | Msa0796810 | 0.811975 | 5.349624e-51 | -8.615850e-47 |
| Msa0371610 | Msa0796810 | 0.812194 | 4.792146e-51 | -8.615850e-47 |
| Msa0413740 | Msa0796810 | 0.828594 | 8.241498e-55 | -8.615850e-47 |
| Msa0417630 | Msa0796810 | 0.804401 | 2.199324e-49 | -8.615850e-47 |
| Msa0421800 | Msa0796810 | 0.842513 | 2.470458e-58 | -8.615850e-47 |
| Msa0427050 | Msa0796810 | 0.811779 | 5.901455e-51 | -8.615850e-47 |
| Msa0448080 | Msa0796810 | 0.804632 | 1.967822e-49 | -8.615850e-47 |
| Msa0450460 | Msa0796810 | 0.801128 | 1.042174e-48 | -8.615850e-47 |
| Msa0458790 | Msa0796810 | 0.820896 | 5.382663e-53 | -8.615850e-47 |
| Msa0462590 | Msa0796810 | 0.803638 | 3.168359e-49 | -8.615850e-47 |
| Msa0467800 | Msa0796810 | 0.815201 | 1.043774e-51 | -8.615850e-47 |
| Msa0467880 | Msa0796810 | 0.814373 | 1.592132e-51 | -8.615850e-47 |
| Msa0482680 | Msa0796810 | 0.809898 | 1.506670e-50 | -8.615850e-47 |
| Msa0252180 | Msa0796810 | 0.835267 | 1.853062e-56 | -8.615850e-47 |
| Msa0263620 | Msa0796810 | 0.825714 | 4.033035e-54 | -8.615850e-47 |
| Msa0278620 | Msa0796810 | 0.811351 | 7.312714e-51 | -8.615850e-47 |
| Msa0281570 | Msa0796810 | 0.807730 | 4.381792e-50 | -8.615850e-47 |
| Msa0282170 | Msa0796810 | 0.811648 | 6.303406e-51 | -8.615850e-47 |
| Msa0288240 | Msa0796810 | 0.820413 | 6.950566e-53 | -8.615850e-47 |
| Msa0288330 | Msa0796810 | 0.808835 | 2.548143e-50 | -8.615850e-47 |
| Msa0296760 | Msa0796810 | 0.809027 | 2.317251e-50 | -8.615850e-47 |
| Msa0298940 | Msa0796810 | 0.809959 | 1.462089e-50 | -8.615850e-47 |
| Msa0298970 | Msa0796810 | 0.809025 | 2.320220e-50 | -8.615850e-47 |
| Msa0301180 | Msa0796810 | 0.830902 | 2.260109e-55 | -8.615850e-47 |
| Msa0306130 | Msa0796810 | 0.811807 | 5.820991e-51 | -8.615850e-47 |
| Msa0318000 | Msa0796810 | 0.819107 | 1.381645e-52 | -8.615850e-47 |
| Msa0320540 | Msa0796810 | 0.824430 | 8.106452e-54 | -8.615850e-47 |
| Msa0336270 | Msa0796810 | 0.833848 | 4.213715e-56 | -8.615850e-47 |
| Msa0342200 | Msa0796810 | 0.800886 | 1.167654e-48 | -8.615850e-47 |
| Msa0344070 | Msa0796810 | 0.803973 | 2.699680e-49 | -8.615850e-47 |
| Msa0357380 | Msa0796810 | 0.812491 | 4.127385e-51 | -8.615850e-47 |
| Msa0357390 | Msa0796810 | 0.810615 | 1.055670e-50 | -8.615850e-47 |
| Msa0505390 | Msa0796810 | 0.826741 | 2.296880e-54 | -8.615850e-47 |
| Msa0505660 | Msa0796810 | 0.802987 | 4.321348e-49 | -8.615850e-47 |
| Msa0514260 | Msa0796810 | 0.844850 | 5.854414e-59 | -8.615850e-47 |
| Msa0524050 | Msa0796810 | 0.833419 | 5.390265e-56 | -8.615850e-47 |
| Msa0524090 | Msa0796810 | 0.848787 | 4.904523e-60 | -8.615850e-47 |
| Msa0524120 | Msa0796810 | 0.866650 | 2.440868e-65 | -8.615850e-47 |
| Msa0535450 | Msa0796810 | 0.830491 | 2.850132e-55 | -8.615850e-47 |
| Msa0540320 | Msa0796810 | 0.820053 | 8.405368e-53 | -8.615850e-47 |
| Msa0542040 | Msa0796810 | 0.803241 | 3.828721e-49 | -8.615850e-47 |
| Msa0546380 | Msa0796810 | 0.809048 | 2.293710e-50 | -8.615850e-47 |
| Msa0546740 | Msa0796810 | 0.820204 | 7.759737e-53 | -8.615850e-47 |
| Msa0576420 | Msa0796810 | 0.815666 | 8.224450e-52 | -8.615850e-47 |
| Msa0577230 | Msa0796810 | 0.803438 | 3.486254e-49 | -8.615850e-47 |
| Msa0579340 | Msa0796810 | 0.807144 | 5.833944e-50 | -8.615850e-47 |
| Msa0582110 | Msa0796810 | 0.819594 | 1.069884e-52 | -8.615850e-47 |
| Msa0591770 | Msa0796810 | 0.804895 | 1.733925e-49 | -8.615850e-47 |
| Msa0596100 | Msa0796810 | 0.808845 | 2.535531e-50 | -8.615850e-47 |
| Msa0598250 | Msa0796810 | 0.815109 | 1.093945e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796810 | MtrunA17_Chr5g0399691 | 93.040 | 273 | 16 | 1 | 1 | 270 | 1 | 273 | 6.07e-157 | 439 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796810 | AT4G17540.1 | 45.714 | 280 | 123 | 5 | 10 | 285 | 28 | 282 | 7.83e-65 | 205 |
Find 101 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCATTTACTTTGAAATT+TGG | 0.141463 | 5_3:+8832176 | Msa0796810:CDS |
| TGTCCAAATTTCAAAGTAAA+TGG | 0.158302 | 5_3:-8832179 | None:intergenic |
| GTTGGACTCCCTTTAAATTT+AGG | 0.167654 | 5_3:+8832245 | Msa0796810:CDS |
| GCATTAGATGACAGGTATTT+AGG | 0.201098 | 5_3:+8835836 | Msa0796810:three_prime_UTR |
| GGACAAGTATTTACTGGTTT+TGG | 0.211578 | 5_3:+8832197 | Msa0796810:CDS |
| TAAGGGAGATCTCACGGTTT+AGG | 0.233689 | 5_3:-8835696 | None:intergenic |
| GCTTGCACGTTATCGCTTAA+AGG | 0.246676 | 5_3:+8835667 | Msa0796810:three_prime_UTR |
| CCTATACTATATCCTGTAAT+TGG | 0.287565 | 5_3:-8835769 | None:intergenic |
| AAGGGAGATCTCACGGTTTA+GGG | 0.290126 | 5_3:-8835695 | None:intergenic |
| AAAGTAGTACCTAAATTTAA+AGG | 0.300602 | 5_3:-8832254 | None:intergenic |
| ATGGGTTACTTACCAATTAC+AGG | 0.311687 | 5_3:+8835757 | Msa0796810:three_prime_UTR |
| CAGTCTGAGAAATTTGATTC+TGG | 0.317467 | 5_3:+8831979 | None:intergenic |
| GCCACAGGTGCAGTCAGTTC+TGG | 0.319464 | 5_3:+8833730 | Msa0796810:CDS |
| TTCATATAGTTGAGGAAGAT+TGG | 0.320215 | 5_3:+8832641 | Msa0796810:intron |
| AAATTTGGACAAGTATTTAC+TGG | 0.322518 | 5_3:+8832191 | Msa0796810:CDS |
| CAAGTTCTTCAATCATTTGC+TGG | 0.323313 | 5_3:-8835460 | None:intergenic |
| CTACAAGTTGCCCCTGCTAA+TGG | 0.340138 | 5_3:+8835738 | Msa0796810:three_prime_UTR |
| GTTGGATGTGGAGTTGGTTT+CGG | 0.345001 | 5_3:+8832686 | Msa0796810:CDS |
| CTTGCACGTTATCGCTTAAA+GGG | 0.350496 | 5_3:+8835668 | Msa0796810:three_prime_UTR |
| ACAAAGATGATGATGAAGTT+TGG | 0.354809 | 5_3:+8833652 | Msa0796810:CDS |
| ACCCGGATTAAACGGTAAAC+TGG | 0.357165 | 5_3:-8833683 | None:intergenic |
| AGAACTAGCTTCAAGTTTGC+TGG | 0.358017 | 5_3:-8835537 | None:intergenic |
| TCCCAGTTTACCGTTTAATC+CGG | 0.367717 | 5_3:+8833681 | Msa0796810:CDS |
| TACAAGTTGCCCCTGCTAAT+GGG | 0.377837 | 5_3:+8835739 | Msa0796810:three_prime_UTR |
| TTGGTTGGAGAGGAGTAAAA+TGG | 0.387600 | 5_3:+8835942 | Msa0796810:three_prime_UTR |
| AAACTTGAAGCTAGTTCTTC+AGG | 0.400339 | 5_3:+8835542 | Msa0796810:CDS |
| TCAACCAATGAACATTGGTT+TGG | 0.414979 | 5_3:+8833813 | Msa0796810:CDS |
| TACATGGGCAAGGGTCTGTT+TGG | 0.419304 | 5_3:+8835923 | Msa0796810:three_prime_UTR |
| TCTGCAAAATCCACTGTTGA+AGG | 0.419732 | 5_3:+8833915 | Msa0796810:CDS |
| AAAGCCAAACCAATGTTCAT+TGG | 0.422194 | 5_3:-8833817 | None:intergenic |
| TGCACCTGTGGCACTTTGTA+AGG | 0.422373 | 5_3:-8833719 | None:intergenic |
| GTGGGTGTTGGATGTGGAGT+TGG | 0.433318 | 5_3:+8832680 | Msa0796810:CDS |
| TACAGTCAAGCTTGCATCAA+TGG | 0.437817 | 5_3:-8832021 | None:intergenic |
| GGCAATGCACCCGGATTAAA+CGG | 0.440473 | 5_3:-8833691 | None:intergenic |
| CATTAGCAGGGGCAACTTGT+AGG | 0.443920 | 5_3:-8835737 | None:intergenic |
| ATCAAGTTATGAGTGCTACT+AGG | 0.451482 | 5_3:+8832497 | Msa0796810:CDS |
| TTTGGAATCGGTTGTGGAGT+TGG | 0.458433 | 5_3:+8832215 | Msa0796810:CDS |
| ATGAGAGCTTACTGATTCGC+TGG | 0.460415 | 5_3:-8833953 | None:intergenic |
| TCAAGTTATGAGTGCTACTA+GGG | 0.471040 | 5_3:+8832498 | Msa0796810:CDS |
| TTGGTAAGTAACCCATTAGC+AGG | 0.472572 | 5_3:-8835750 | None:intergenic |
| TGTGGAGTTGGTTTCGGTCA+TGG | 0.472934 | 5_3:+8832692 | Msa0796810:CDS |
| TGTGGAGTTGGTATCGGTGT+TGG | 0.473438 | 5_3:+8832227 | Msa0796810:CDS |
| ACAGGACTTGCTGTGAAACC+TGG | 0.477065 | 5_3:+8833503 | Msa0796810:intron |
| CCAATTACAGGATATAGTAT+AGG | 0.478483 | 5_3:+8835769 | Msa0796810:three_prime_UTR |
| AAGTAGTACCTAAATTTAAA+GGG | 0.480476 | 5_3:-8832253 | None:intergenic |
| GTTGGTTTCGGTCATGGTGT+TGG | 0.481887 | 5_3:+8832698 | Msa0796810:CDS |
| ATTGAAGTGGGTGTTGGATG+TGG | 0.485704 | 5_3:+8832674 | Msa0796810:CDS |
| TGGAGGAAAATGAGAAGCTT+CGG | 0.486885 | 5_3:+8835483 | Msa0796810:CDS |
| CCTCCTTCTCCCTTCAACAG+TGG | 0.488432 | 5_3:-8833925 | None:intergenic |
| TGGGCAAGGGTCTGTTTGGT+TGG | 0.489899 | 5_3:+8835927 | Msa0796810:three_prime_UTR |
| AAAAGATAAGAGTAGTATTG+AGG | 0.494638 | 5_3:+8832113 | Msa0796810:five_prime_UTR |
| GCATCAATGGAAGCAATAGT+TGG | 0.495167 | 5_3:-8832008 | None:intergenic |
| AAGGGTCTGTTTGGTTGGAG+AGG | 0.496557 | 5_3:+8835932 | Msa0796810:three_prime_UTR |
| ACTTCAGCCGACTCTACATA+TGG | 0.500649 | 5_3:+8833862 | Msa0796810:CDS |
| TTCGGTCATGGTGTTGGAGT+TGG | 0.502955 | 5_3:+8832704 | Msa0796810:CDS |
| CCCAGTTTACCGTTTAATCC+GGG | 0.504429 | 5_3:+8833682 | Msa0796810:CDS |
| TGAATTTGATTCAACACCCC+AGG | 0.508485 | 5_3:-8833521 | None:intergenic |
| ACTAATTAGCATTAGATGAC+AGG | 0.510013 | 5_3:+8835828 | Msa0796810:three_prime_UTR |
| AAGAAAACAAAGAAGAAAGT+AGG | 0.525920 | 5_3:+8835610 | Msa0796810:CDS |
| CACTCAAAACAATCAGTACA+TGG | 0.527145 | 5_3:-8835584 | None:intergenic |
| CTGCAAAATCCACTGTTGAA+GGG | 0.528070 | 5_3:+8833916 | Msa0796810:CDS |
| AAGAATATTGAAGTGGGTGT+TGG | 0.528611 | 5_3:+8832668 | Msa0796810:CDS |
| ATCGGTTGTGGAGTTGGTAT+CGG | 0.538819 | 5_3:+8832221 | Msa0796810:CDS |
| ATAAGAGTAGTATTGAGGAA+TGG | 0.547460 | 5_3:+8832118 | Msa0796810:exon |
| AGATGACAGGTATTTAGGAA+TGG | 0.555064 | 5_3:+8835841 | Msa0796810:three_prime_UTR |
| CCCGGATTAAACGGTAAACT+GGG | 0.556288 | 5_3:-8833682 | None:intergenic |
| GCAAATGATTGAAGAACTTG+TGG | 0.559081 | 5_3:+8835463 | Msa0796810:CDS |
| AAGGATGCTGGCAATGCACC+CGG | 0.560291 | 5_3:-8833700 | None:intergenic |
| CAGGACTTGCTGTGAAACCT+GGG | 0.561209 | 5_3:+8833504 | Msa0796810:intron |
| AGAGAACAAAATACTTCAGA+TGG | 0.561726 | 5_3:+8835289 | Msa0796810:CDS |
| ATAATATAGTAAAAGATACA+TGG | 0.562231 | 5_3:+8835907 | Msa0796810:three_prime_UTR |
| TAGTAAAAGATACATGGGCA+AGG | 0.571477 | 5_3:+8835913 | Msa0796810:three_prime_UTR |
| TCCAGAACTGACTGCACCTG+TGG | 0.578803 | 5_3:-8833731 | None:intergenic |
| TGGTAAGTAACCCATTAGCA+GGG | 0.583261 | 5_3:-8835749 | None:intergenic |
| CTAGCTTCAAGTTTGCTGGA+TGG | 0.583563 | 5_3:-8835533 | None:intergenic |
| TGAGAGCTTACTGATTCGCT+GGG | 0.586043 | 5_3:-8833952 | None:intergenic |
| GTGGCACTTTGTAAGGATGC+TGG | 0.588800 | 5_3:-8833712 | None:intergenic |
| AATCCACTGTTGAAGGGAGA+AGG | 0.589188 | 5_3:+8833922 | Msa0796810:CDS |
| GCATCCTTACAAAGTGCCAC+AGG | 0.589278 | 5_3:+8833715 | Msa0796810:CDS |
| TCAGCTGATCAGTTATCTCA+AGG | 0.590242 | 5_3:+8833778 | Msa0796810:CDS |
| GTTGGAGAGGAGTAAAATGG+AGG | 0.596132 | 5_3:+8835945 | Msa0796810:three_prime_UTR |
| ATATGGCAGTCGAACTGAGA+AGG | 0.597072 | 5_3:+8833879 | Msa0796810:CDS |
| TGGAGCTAAGAATATTGAAG+TGG | 0.597204 | 5_3:+8832661 | Msa0796810:CDS |
| CCACTGTTGAAGGGAGAAGG+AGG | 0.603974 | 5_3:+8833925 | Msa0796810:CDS |
| GGAGCTAAGAATATTGAAGT+GGG | 0.605534 | 5_3:+8832662 | Msa0796810:CDS |
| AGTAAAAGATACATGGGCAA+GGG | 0.606431 | 5_3:+8835914 | Msa0796810:three_prime_UTR |
| AATGATTGAAGAACTTGTGG+AGG | 0.616671 | 5_3:+8835466 | Msa0796810:CDS |
| TAATATAGTAAAAGATACAT+GGG | 0.620520 | 5_3:+8835908 | Msa0796810:three_prime_UTR |
| CTGTTGAAGGGAGAAGGAGG+AGG | 0.623525 | 5_3:+8833928 | Msa0796810:CDS |
| TCGACTGCCATATGTAGAGT+CGG | 0.624499 | 5_3:-8833869 | None:intergenic |
| GGGTCTCAACCAATGAACAT+TGG | 0.632984 | 5_3:+8833808 | Msa0796810:intron |
| GCTTCGGCAGATACTAGTGA+AGG | 0.640377 | 5_3:+8835499 | Msa0796810:CDS |
| TGTTGCAGTGAGTTGAGTTG+AGG | 0.643118 | 5_3:-8832071 | None:intergenic |
| CTCATAACTTGATTCAACAT+CGG | 0.655826 | 5_3:-8832487 | None:intergenic |
| TTGCACGTTATCGCTTAAAG+GGG | 0.660290 | 5_3:+8835669 | Msa0796810:three_prime_UTR |
| AGGGAGATCTCACGGTTTAG+GGG | 0.678296 | 5_3:-8835694 | None:intergenic |
| GGTAAGTAACCCATTAGCAG+GGG | 0.690059 | 5_3:-8835748 | None:intergenic |
| AGGACTTGCTGTGAAACCTG+GGG | 0.707838 | 5_3:+8833505 | Msa0796810:intron |
| CAAGTTATGAGTGCTACTAG+GGG | 0.719794 | 5_3:+8832499 | Msa0796810:CDS |
| ATCGTATTCGTAGAACGTGG+CGG | 0.735634 | 5_3:-8832045 | None:intergenic |
| AGCATCGTATTCGTAGAACG+TGG | 0.739027 | 5_3:-8832048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | - | chr5_3:8835147-8835166 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAGTGAAAA+AGG | - | chr5_3:8832386-8832405 | None:intergenic | 10.0% |
| !!! | AATTTTACAAAATACTATTT+TGG | - | chr5_3:8834378-8834397 | None:intergenic | 10.0% |
| !!! | TATTGTTATTTTTTTCAAAA+CGG | + | chr5_3:8834547-8834566 | Msa0796810:intron | 10.0% |
| !!! | ATTATTTCTTAATTTTTCTT+GGG | - | chr5_3:8835892-8835911 | None:intergenic | 10.0% |
| !!! | TATTATTTCTTAATTTTTCT+TGG | - | chr5_3:8835893-8835912 | None:intergenic | 10.0% |
| !!! | TTTTGAATTATTGATCATTT+AGG | + | chr5_3:8832825-8832844 | Msa0796810:intron | 15.0% |
| !!! | TTTTCTTTTATTATTATGAC+AGG | + | chr5_3:8833485-8833504 | Msa0796810:intron | 15.0% |
| !!! | TTGTTTCTTTATATACTTTT+TGG | + | chr5_3:8834992-8835011 | Msa0796810:intron | 15.0% |
| !!! | TGTTTATTTATTTTTTCCTA+TGG | + | chr5_3:8835420-8835439 | Msa0796810:intron | 15.0% |
| !! | ATAATATAGTAAAAGATACA+TGG | + | chr5_3:8835907-8835926 | Msa0796810:three_prime_UTR | 15.0% |
| !! | TAATATAGTAAAAGATACAT+GGG | + | chr5_3:8835908-8835927 | Msa0796810:three_prime_UTR | 15.0% |
| !!! | AATCCATTTACTTTGAAATT+TGG | + | chr5_3:8832176-8832195 | Msa0796810:CDS | 20.0% |
| !! | AAGTAGTACCTAAATTTAAA+GGG | - | chr5_3:8832256-8832275 | None:intergenic | 20.0% |
| !! | AAAGTAGTACCTAAATTTAA+AGG | - | chr5_3:8832257-8832276 | None:intergenic | 20.0% |
| !! | TTGTAACTTTAAGTGTATTT+AGG | + | chr5_3:8832798-8832817 | Msa0796810:intron | 20.0% |
| !! | TGTAACTTTAAGTGTATTTA+GGG | + | chr5_3:8832799-8832818 | Msa0796810:intron | 20.0% |
| !!! | CGAATTTTTTTAGATCATTT+AGG | + | chr5_3:8832878-8832897 | Msa0796810:intron | 20.0% |
| !!! | CATAATATTGAAAATTTTCC+AGG | + | chr5_3:8832910-8832929 | Msa0796810:intron | 20.0% |
| !!! | TCTATTCATGAGTTTTTTTT+GGG | - | chr5_3:8834401-8834420 | None:intergenic | 20.0% |
| !!! | ATCTATTCATGAGTTTTTTT+TGG | - | chr5_3:8834402-8834421 | None:intergenic | 20.0% |
| !! | TTTCAAATATCACATTTGTT+TGG | + | chr5_3:8834753-8834772 | Msa0796810:intron | 20.0% |
| !!! | TTATTTTTTCCTATGGTTAT+AGG | + | chr5_3:8835427-8835446 | Msa0796810:intron | 20.0% |
| ! | AAAAGATAAGAGTAGTATTG+AGG | + | chr5_3:8832113-8832132 | Msa0796810:five_prime_UTR | 25.0% |
| ! | TGTCCAAATTTCAAAGTAAA+TGG | - | chr5_3:8832182-8832201 | None:intergenic | 25.0% |
| ! | AAATTTGGACAAGTATTTAC+TGG | + | chr5_3:8832191-8832210 | Msa0796810:CDS | 25.0% |
| ! | AATCCATAGTAATGTGAAAT+TGG | - | chr5_3:8832293-8832312 | None:intergenic | 25.0% |
| ! | TTTCACATTACTATGGATTT+CGG | + | chr5_3:8832294-8832313 | Msa0796810:intron | 25.0% |
| ! | AAAAGGTAATAAGAGATACA+TGG | - | chr5_3:8832369-8832388 | None:intergenic | 25.0% |
| !!! | TCTTATTCTGAATTTGTTGT+AGG | + | chr5_3:8832457-8832476 | Msa0796810:intron | 25.0% |
| !!! | ACTTGTTTTTCATATAGTTG+AGG | + | chr5_3:8832633-8832652 | Msa0796810:intron | 25.0% |
| ! | TGAATTATTGATCATTTAGG+AGG | + | chr5_3:8832828-8832847 | Msa0796810:intron | 25.0% |
| !! | AATATTGAAAATTTTCCAGG+AGG | + | chr5_3:8832913-8832932 | Msa0796810:intron | 25.0% |
| ! | ATCTATGATCTATAATACAC+AGG | - | chr5_3:8832973-8832992 | None:intergenic | 25.0% |
| ! | ATAACAGTTCATAAAGCATA+AGG | + | chr5_3:8833062-8833081 | Msa0796810:intron | 25.0% |
| ! | TAACAGTTCATAAAGCATAA+GGG | + | chr5_3:8833063-8833082 | Msa0796810:intron | 25.0% |
| !!! | GTTTTTTAATATACAGTTCG+AGG | - | chr5_3:8833184-8833203 | None:intergenic | 25.0% |
| ! | ATGAAGTGGTAAAGAAAATA+TGG | - | chr5_3:8833385-8833404 | None:intergenic | 25.0% |
| !! | ATTTTCTTTACCACTTCATA+TGG | + | chr5_3:8833386-8833405 | Msa0796810:intron | 25.0% |
| !! | TTTTCTTTACCACTTCATAT+GGG | + | chr5_3:8833387-8833406 | Msa0796810:intron | 25.0% |
| ! | TTAAACATGAGATACACAAA+AGG | - | chr5_3:8833607-8833626 | None:intergenic | 25.0% |
| ! | TAAAAAATCCTCATTCCAAA+TGG | - | chr5_3:8834192-8834211 | None:intergenic | 25.0% |
| !!! | ATTTGGAATGAGGATTTTTT+AGG | + | chr5_3:8834191-8834210 | Msa0796810:intron | 25.0% |
| !!! | TTTGGAATGAGGATTTTTTA+GGG | + | chr5_3:8834192-8834211 | Msa0796810:intron | 25.0% |
| ! | AAAAACTCATGAATAGATGT+TGG | + | chr5_3:8834404-8834423 | Msa0796810:intron | 25.0% |
| ! | AAAACTCATGAATAGATGTT+GGG | + | chr5_3:8834405-8834424 | Msa0796810:intron | 25.0% |
| !! | TTAAATTTTCTTGAGACAGA+GGG | - | chr5_3:8834794-8834813 | None:intergenic | 25.0% |
| ! | CTCAAGAAAATTTAAGTACA+AGG | + | chr5_3:8834799-8834818 | Msa0796810:intron | 25.0% |
| !! | TGATATTTAAGATACATTGC+AGG | + | chr5_3:8835250-8835269 | Msa0796810:intron | 25.0% |
| ! | AAGAAAACAAAGAAGAAAGT+AGG | + | chr5_3:8835610-8835629 | Msa0796810:CDS | 25.0% |
| !!! | AGATCTCCCTTAATTTTTTT+GGG | + | chr5_3:8835707-8835726 | Msa0796810:three_prime_UTR | 25.0% |
| ! | ACAAGACCCAAAAAAATTAA+GGG | - | chr5_3:8835716-8835735 | None:intergenic | 25.0% |
| ! | AACAAGACCCAAAAAAATTA+AGG | - | chr5_3:8835717-8835736 | None:intergenic | 25.0% |
| ! | ATAAGAGTAGTATTGAGGAA+TGG | + | chr5_3:8832118-8832137 | Msa0796810:exon | 30.0% |
| GGAATGGAAAACAAAAATGA+AGG | + | chr5_3:8832134-8832153 | Msa0796810:exon | 30.0% | |
| !!! | GTATTTACTGGTTTTGGAAT+CGG | + | chr5_3:8832203-8832222 | Msa0796810:CDS | 30.0% |
| GTGAAATTGGAAGAGAATAA+GGG | - | chr5_3:8832280-8832299 | None:intergenic | 30.0% | |
| TGTGAAATTGGAAGAGAATA+AGG | - | chr5_3:8832281-8832300 | None:intergenic | 30.0% | |
| CTTCCAATTTCACATTACTA+TGG | + | chr5_3:8832287-8832306 | Msa0796810:intron | 30.0% | |
| !!! | AGATACATGGTTTTTGAGTA+GGG | - | chr5_3:8832356-8832375 | None:intergenic | 30.0% |
| CTCATAACTTGATTCAACAT+CGG | - | chr5_3:8832490-8832509 | None:intergenic | 30.0% | |
| TTCATATAGTTGAGGAAGAT+TGG | + | chr5_3:8832641-8832660 | Msa0796810:intron | 30.0% | |
| !!! | TGCTTTGAAAACCATTTTCA+TGG | - | chr5_3:8833014-8833033 | None:intergenic | 30.0% |
| AACAGTTCATAAAGCATAAG+GGG | + | chr5_3:8833064-8833083 | Msa0796810:intron | 30.0% | |
| AAAGAAAATATGGAGAGGAT+GGG | - | chr5_3:8833375-8833394 | None:intergenic | 30.0% | |
| TAAAGAAAATATGGAGAGGA+TGG | - | chr5_3:8833376-8833395 | None:intergenic | 30.0% | |
| TGAAGAATGTTCACAAAACA+TGG | - | chr5_3:8833450-8833469 | None:intergenic | 30.0% | |
| ! | ACAAAGATGATGATGAAGTT+TGG | + | chr5_3:8833652-8833671 | Msa0796810:CDS | 30.0% |
| CACTTTATGCTTCACATAAA+TGG | + | chr5_3:8834093-8834112 | Msa0796810:intron | 30.0% | |
| !!! | AGGATTTTTTAGGGCTATAA+GGG | + | chr5_3:8834201-8834220 | Msa0796810:intron | 30.0% |
| ! | GCAAGAATCAAATTTTTCCT+AGG | - | chr5_3:8834329-8834348 | None:intergenic | 30.0% |
| !!! | CATACTTTTCCAAAAGTGTT+TGG | + | chr5_3:8834348-8834367 | Msa0796810:intron | 30.0% |
| ! | TTTGGAAAACCAAACACTTT+TGG | - | chr5_3:8834360-8834379 | None:intergenic | 30.0% |
| AAACTCATGAATAGATGTTG+GGG | + | chr5_3:8834406-8834425 | Msa0796810:intron | 30.0% | |
| !!! | TTTTGGCGATAATGGAATTT+GGG | + | chr5_3:8834429-8834448 | Msa0796810:intron | 30.0% |
| !!! | TTTTTTTCAAAACGGTATCC+TGG | + | chr5_3:8834555-8834574 | Msa0796810:intron | 30.0% |
| !!! | TTTTTTCAAAACGGTATCCT+GGG | + | chr5_3:8834556-8834575 | Msa0796810:intron | 30.0% |
| ! | TAAATTTTCTTGAGACAGAG+GGG | - | chr5_3:8834793-8834812 | None:intergenic | 30.0% |
| ! | CTTAAATTTTCTTGAGACAG+AGG | - | chr5_3:8834795-8834814 | None:intergenic | 30.0% |
| TTGTTGAGACTGGAAAAATA+TGG | + | chr5_3:8834851-8834870 | Msa0796810:intron | 30.0% | |
| !! | TACTTTTTGGTGATTAACTG+TGG | + | chr5_3:8835005-8835024 | Msa0796810:intron | 30.0% |
| AGAGAACAAAATACTTCAGA+TGG | + | chr5_3:8835289-8835308 | Msa0796810:CDS | 30.0% | |
| GTTTCAAAACCTATAACCAT+AGG | - | chr5_3:8835439-8835458 | None:intergenic | 30.0% | |
| AAAAATTAAGGGAGATCTCA+CGG | - | chr5_3:8835705-8835724 | None:intergenic | 30.0% | |
| !!! | GAGATCTCCCTTAATTTTTT+TGG | + | chr5_3:8835706-8835725 | Msa0796810:three_prime_UTR | 30.0% |
| CCTATACTATATCCTGTAAT+TGG | - | chr5_3:8835772-8835791 | None:intergenic | 30.0% | |
| CCAATTACAGGATATAGTAT+AGG | + | chr5_3:8835769-8835788 | Msa0796810:three_prime_UTR | 30.0% | |
| ACTAATTAGCATTAGATGAC+AGG | + | chr5_3:8835828-8835847 | Msa0796810:three_prime_UTR | 30.0% | |
| !!! | GGACAAGTATTTACTGGTTT+TGG | + | chr5_3:8832197-8832216 | Msa0796810:CDS | 35.0% |
| GTTGGACTCCCTTTAAATTT+AGG | + | chr5_3:8832245-8832264 | Msa0796810:CDS | 35.0% | |
| !!! | TTTTTGAGTAGGGGAATTTC+GGG | - | chr5_3:8832346-8832365 | None:intergenic | 35.0% |
| !!! | GTTTTTGAGTAGGGGAATTT+CGG | - | chr5_3:8832347-8832366 | None:intergenic | 35.0% |
| !!! | GATACATGGTTTTTGAGTAG+GGG | - | chr5_3:8832355-8832374 | None:intergenic | 35.0% |
| !!! | GAGATACATGGTTTTTGAGT+AGG | - | chr5_3:8832357-8832376 | None:intergenic | 35.0% |
| ! | ATCAAGTTATGAGTGCTACT+AGG | + | chr5_3:8832497-8832516 | Msa0796810:CDS | 35.0% |
| ! | TCAAGTTATGAGTGCTACTA+GGG | + | chr5_3:8832498-8832517 | Msa0796810:CDS | 35.0% |
| TGGAGCTAAGAATATTGAAG+TGG | + | chr5_3:8832661-8832680 | Msa0796810:CDS | 35.0% | |
| GGAGCTAAGAATATTGAAGT+GGG | + | chr5_3:8832662-8832681 | Msa0796810:CDS | 35.0% | |
| AAGAATATTGAAGTGGGTGT+TGG | + | chr5_3:8832668-8832687 | Msa0796810:CDS | 35.0% | |
| ! | TTGAAAATTTTCCAGGAGGT+AGG | + | chr5_3:8832917-8832936 | Msa0796810:intron | 35.0% |
| AGTTATGCACTCCATGAAAA+TGG | + | chr5_3:8833000-8833019 | Msa0796810:intron | 35.0% | |
| !! | AAATGGTTTTCAAAGCACCT+CGG | + | chr5_3:8833017-8833036 | Msa0796810:intron | 35.0% |
| TTGAAGCAGAAGATGTTGTT+AGG | + | chr5_3:8833256-8833275 | Msa0796810:intron | 35.0% | |
| TGAAGCAGAAGATGTTGTTA+GGG | + | chr5_3:8833257-8833276 | Msa0796810:intron | 35.0% | |
| GTGGTAAAGAAAATATGGAG+AGG | - | chr5_3:8833380-8833399 | None:intergenic | 35.0% | |
| CATCTTTGTCATTGTCATCT+AGG | - | chr5_3:8833641-8833660 | None:intergenic | 35.0% | |
| AGTTATCTCAAGGTCTAGTA+GGG | + | chr5_3:8833788-8833807 | Msa0796810:intron | 35.0% | |
| ! | TCAACCAATGAACATTGGTT+TGG | + | chr5_3:8833813-8833832 | Msa0796810:CDS | 35.0% |
| AAAGCCAAACCAATGTTCAT+TGG | - | chr5_3:8833820-8833839 | None:intergenic | 35.0% | |
| GCTTCAATGATCAGAAGAAA+AGG | - | chr5_3:8834015-8834034 | None:intergenic | 35.0% | |
| !! | ACCATTTTCCATTTGGAATG+AGG | + | chr5_3:8834181-8834200 | Msa0796810:intron | 35.0% |
| TCCTCATTCCAAATGGAAAA+TGG | - | chr5_3:8834185-8834204 | None:intergenic | 35.0% | |
| !!! | GAGGATTTTTTAGGGCTATA+AGG | + | chr5_3:8834200-8834219 | Msa0796810:intron | 35.0% |
| !!! | ATTTTTTAGGGCTATAAGGG+AGG | + | chr5_3:8834204-8834223 | Msa0796810:intron | 35.0% |
| ! | ATGAATAGATGTTGGGGTTT+TGG | + | chr5_3:8834412-8834431 | Msa0796810:intron | 35.0% |
| !!! | GTTTTGGCGATAATGGAATT+TGG | + | chr5_3:8834428-8834447 | Msa0796810:intron | 35.0% |
| ! | AATGTTCGCGTATTGTTTTC+AGG | - | chr5_3:8834692-8834711 | None:intergenic | 35.0% |
| GCTGTTTAAATTGTTGAGAC+TGG | + | chr5_3:8834841-8834860 | Msa0796810:intron | 35.0% | |
| AAATATGGTTATCTGCTGAG+AGG | + | chr5_3:8834866-8834885 | Msa0796810:intron | 35.0% | |
| ! | CTGTGTGACAATTTTAAACG+AGG | + | chr5_3:8834957-8834976 | Msa0796810:intron | 35.0% |
| TGGTGATTAACTGTGGTATT+TGG | + | chr5_3:8835012-8835031 | Msa0796810:intron | 35.0% | |
| GGTGATTAACTGTGGTATTT+GGG | + | chr5_3:8835013-8835032 | Msa0796810:intron | 35.0% | |
| CAGAAAAAACTCACGAAAGA+GGG | - | chr5_3:8835204-8835223 | None:intergenic | 35.0% | |
| TCAGAAAAAACTCACGAAAG+AGG | - | chr5_3:8835205-8835224 | None:intergenic | 35.0% | |
| ! | ATTTAAGATACATTGCAGGC+TGG | + | chr5_3:8835254-8835273 | Msa0796810:intron | 35.0% |
| !!! | CTTGTTGATTTTTTTTGCGC+TGG | + | chr5_3:8835374-8835393 | Msa0796810:intron | 35.0% |
| CAAGTTCTTCAATCATTTGC+TGG | - | chr5_3:8835463-8835482 | None:intergenic | 35.0% | |
| GCAAATGATTGAAGAACTTG+TGG | + | chr5_3:8835463-8835482 | Msa0796810:CDS | 35.0% | |
| AATGATTGAAGAACTTGTGG+AGG | + | chr5_3:8835466-8835485 | Msa0796810:CDS | 35.0% | |
| ! | AAACTTGAAGCTAGTTCTTC+AGG | + | chr5_3:8835542-8835561 | Msa0796810:CDS | 35.0% |
| CACTCAAAACAATCAGTACA+TGG | - | chr5_3:8835587-8835606 | None:intergenic | 35.0% | |
| ! | ATGGGTTACTTACCAATTAC+AGG | + | chr5_3:8835757-8835776 | Msa0796810:three_prime_UTR | 35.0% |
| GCATTAGATGACAGGTATTT+AGG | + | chr5_3:8835836-8835855 | Msa0796810:three_prime_UTR | 35.0% | |
| AGATGACAGGTATTTAGGAA+TGG | + | chr5_3:8835841-8835860 | Msa0796810:three_prime_UTR | 35.0% | |
| TAGTAAAAGATACATGGGCA+AGG | + | chr5_3:8835913-8835932 | Msa0796810:three_prime_UTR | 35.0% | |
| AGTAAAAGATACATGGGCAA+GGG | + | chr5_3:8835914-8835933 | Msa0796810:three_prime_UTR | 35.0% | |
| GCATCAATGGAAGCAATAGT+TGG | - | chr5_3:8832011-8832030 | None:intergenic | 40.0% | |
| TACAGTCAAGCTTGCATCAA+TGG | - | chr5_3:8832024-8832043 | None:intergenic | 40.0% | |
| !! | TTTTGAGTAGGGGAATTTCG+GGG | - | chr5_3:8832345-8832364 | None:intergenic | 40.0% |
| ! | CAAGTTATGAGTGCTACTAG+GGG | + | chr5_3:8832499-8832518 | Msa0796810:CDS | 40.0% |
| !! | ATGCATTTTCTGGTGTTAGC+AGG | + | chr5_3:8832530-8832549 | Msa0796810:CDS | 40.0% |
| ! | CAAGCCTTATCGCTTTAAGT+GGG | + | chr5_3:8833119-8833138 | Msa0796810:intron | 40.0% |
| ! | AAGCCTTATCGCTTTAAGTG+GGG | + | chr5_3:8833120-8833139 | Msa0796810:intron | 40.0% |
| TCTGCAGTATCCAGAGATTT+AGG | - | chr5_3:8833301-8833320 | None:intergenic | 40.0% | |
| AAATATGGAGAGGATGGGAT+AGG | - | chr5_3:8833370-8833389 | None:intergenic | 40.0% | |
| TCTTTACCACTTCATATGGG+TGG | + | chr5_3:8833390-8833409 | Msa0796810:intron | 40.0% | |
| CATAATCCACCCATATGAAG+TGG | - | chr5_3:8833399-8833418 | None:intergenic | 40.0% | |
| TGAATTTGATTCAACACCCC+AGG | - | chr5_3:8833524-8833543 | None:intergenic | 40.0% | |
| TCCCAGTTTACCGTTTAATC+CGG | + | chr5_3:8833681-8833700 | Msa0796810:CDS | 40.0% | |
| TCAGCTGATCAGTTATCTCA+AGG | + | chr5_3:8833778-8833797 | Msa0796810:CDS | 40.0% | |
| CAGTTATCTCAAGGTCTAGT+AGG | + | chr5_3:8833787-8833806 | Msa0796810:intron | 40.0% | |
| TCTGCAAAATCCACTGTTGA+AGG | + | chr5_3:8833915-8833934 | Msa0796810:CDS | 40.0% | |
| CTGCAAAATCCACTGTTGAA+GGG | + | chr5_3:8833916-8833935 | Msa0796810:CDS | 40.0% | |
| ! | TGCTGAGACCATTTTCCATT+TGG | + | chr5_3:8834174-8834193 | Msa0796810:intron | 40.0% |
| GAGAAGGTAGGCTAAAATTC+AGG | + | chr5_3:8834255-8834274 | Msa0796810:intron | 40.0% | |
| !! | GTGCCATTTGACTTGTATCA+CGG | + | chr5_3:8834301-8834320 | Msa0796810:intron | 40.0% |
| !! | ATGAGTTGGTCATGTTGGTT+GGG | + | chr5_3:8834521-8834540 | Msa0796810:intron | 40.0% |
| !!! | CTTGGTTTTTGGCCAAAACA+GGG | + | chr5_3:8834610-8834629 | Msa0796810:intron | 40.0% |
| !!! | TTGGTTTTTGGCCAAAACAG+GGG | + | chr5_3:8834611-8834630 | Msa0796810:intron | 40.0% |
| AAAAACTCACGAAAGAGGGA+AGG | - | chr5_3:8835200-8835219 | None:intergenic | 40.0% | |
| TTCCAAGTCTATCAGTGTTG+AGG | - | chr5_3:8835331-8835350 | None:intergenic | 40.0% | |
| TGGAGGAAAATGAGAAGCTT+CGG | + | chr5_3:8835483-8835502 | Msa0796810:CDS | 40.0% | |
| ! | AGAACTAGCTTCAAGTTTGC+TGG | - | chr5_3:8835540-8835559 | None:intergenic | 40.0% |
| CTTGCACGTTATCGCTTAAA+GGG | + | chr5_3:8835668-8835687 | Msa0796810:three_prime_UTR | 40.0% | |
| TTGCACGTTATCGCTTAAAG+GGG | + | chr5_3:8835669-8835688 | Msa0796810:three_prime_UTR | 40.0% | |
| TGGTAAGTAACCCATTAGCA+GGG | - | chr5_3:8835752-8835771 | None:intergenic | 40.0% | |
| TTGGTAAGTAACCCATTAGC+AGG | - | chr5_3:8835753-8835772 | None:intergenic | 40.0% | |
| ATCGTATTCGTAGAACGTGG+CGG | - | chr5_3:8832048-8832067 | None:intergenic | 45.0% | |
| AGCATCGTATTCGTAGAACG+TGG | - | chr5_3:8832051-8832070 | None:intergenic | 45.0% | |
| ! | TGTTGCAGTGAGTTGAGTTG+AGG | - | chr5_3:8832074-8832093 | None:intergenic | 45.0% |
| !!! | ACTGGTTTTGGAATCGGTTG+TGG | + | chr5_3:8832209-8832228 | Msa0796810:CDS | 45.0% |
| ! | TTTGGAATCGGTTGTGGAGT+TGG | + | chr5_3:8832215-8832234 | Msa0796810:CDS | 45.0% |
| !! | ATCGGTTGTGGAGTTGGTAT+CGG | + | chr5_3:8832221-8832240 | Msa0796810:CDS | 45.0% |
| ! | GGTGCAACTGATGCATTTTC+TGG | + | chr5_3:8832520-8832539 | Msa0796810:CDS | 45.0% |
| !! | ATTGAAGTGGGTGTTGGATG+TGG | + | chr5_3:8832674-8832693 | Msa0796810:CDS | 45.0% |
| ! | GTTGGATGTGGAGTTGGTTT+CGG | + | chr5_3:8832686-8832705 | Msa0796810:CDS | 45.0% |
| ! | TTCCAGGAGGTAGGTTTTTG+TGG | + | chr5_3:8832926-8832945 | Msa0796810:intron | 45.0% |
| TTCCACAAAAACCTACCTCC+TGG | - | chr5_3:8832931-8832950 | None:intergenic | 45.0% | |
| CCACTTAAAGCGATAAGGCT+TGG | - | chr5_3:8833121-8833140 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCGCTTTAAG+TGG | + | chr5_3:8833118-8833137 | Msa0796810:intron | 45.0% |
| ! | CTTATCGCTTTAAGTGGGGT+CGG | + | chr5_3:8833124-8833143 | Msa0796810:intron | 45.0% |
| GTTCGAGGCATAGAACACTA+TGG | - | chr5_3:8833169-8833188 | None:intergenic | 45.0% | |
| CCCGGATTAAACGGTAAACT+GGG | - | chr5_3:8833685-8833704 | None:intergenic | 45.0% | |
| CCCAGTTTACCGTTTAATCC+GGG | + | chr5_3:8833682-8833701 | Msa0796810:CDS | 45.0% | |
| ACCCGGATTAAACGGTAAAC+TGG | - | chr5_3:8833686-8833705 | None:intergenic | 45.0% | |
| GGGTCTCAACCAATGAACAT+TGG | + | chr5_3:8833808-8833827 | Msa0796810:intron | 45.0% | |
| !! | GTCGGCTGAAGTGTCTTTTA+TGG | - | chr5_3:8833854-8833873 | None:intergenic | 45.0% |
| ! | ACTTCAGCCGACTCTACATA+TGG | + | chr5_3:8833862-8833881 | Msa0796810:CDS | 45.0% |
| TCGACTGCCATATGTAGAGT+CGG | - | chr5_3:8833872-8833891 | None:intergenic | 45.0% | |
| ATATGGCAGTCGAACTGAGA+AGG | + | chr5_3:8833879-8833898 | Msa0796810:CDS | 45.0% | |
| AATCCACTGTTGAAGGGAGA+AGG | + | chr5_3:8833922-8833941 | Msa0796810:CDS | 45.0% | |
| !! | TGAGAGCTTACTGATTCGCT+GGG | - | chr5_3:8833955-8833974 | None:intergenic | 45.0% |
| !! | ATGAGAGCTTACTGATTCGC+TGG | - | chr5_3:8833956-8833975 | None:intergenic | 45.0% |
| TAGTGTGGAGATGAGAAGGT+AGG | + | chr5_3:8834243-8834262 | Msa0796810:intron | 45.0% | |
| TCAAATGGCACAAAGCCCTT+TGG | - | chr5_3:8834292-8834311 | None:intergenic | 45.0% | |
| GAGCCGTGATACAAGTCAAA+TGG | - | chr5_3:8834307-8834326 | None:intergenic | 45.0% | |
| !! | TGTTGGGGTTTTGGCGATAA+TGG | + | chr5_3:8834421-8834440 | Msa0796810:intron | 45.0% |
| !! | TACTGGTATGGTGGGTAGAA+AGG | + | chr5_3:8834494-8834513 | Msa0796810:intron | 45.0% |
| GGTAGAAAGGATGGATGAGT+TGG | + | chr5_3:8834507-8834526 | Msa0796810:intron | 45.0% | |
| !! | GATGGATGAGTTGGTCATGT+TGG | + | chr5_3:8834516-8834535 | Msa0796810:intron | 45.0% |
| !! | GATGAGTTGGTCATGTTGGT+TGG | + | chr5_3:8834520-8834539 | Msa0796810:intron | 45.0% |
| ! | TGGGGTTTTCTTTAACACCC+AGG | - | chr5_3:8834576-8834595 | None:intergenic | 45.0% |
| !! | CTCCCTATGAGCTTGGTTTT+TGG | + | chr5_3:8834599-8834618 | Msa0796810:intron | 45.0% |
| GGCCAAAAACCAAGCTCATA+GGG | - | chr5_3:8834604-8834623 | None:intergenic | 45.0% | |
| TGGCCAAAAACCAAGCTCAT+AGG | - | chr5_3:8834605-8834624 | None:intergenic | 45.0% | |
| !!! | GCTTGGTTTTTGGCCAAAAC+AGG | + | chr5_3:8834609-8834628 | Msa0796810:intron | 45.0% |
| ! | GATGCAACATTCCCCTGTTT+TGG | - | chr5_3:8834625-8834644 | None:intergenic | 45.0% |
| TAACAACAGACGATGCCTAC+AGG | - | chr5_3:8834935-8834954 | None:intergenic | 45.0% | |
| GTCCTCAACACTGATAGACT+TGG | + | chr5_3:8835326-8835345 | Msa0796810:intron | 45.0% | |
| !! | CTAGCTTCAAGTTTGCTGGA+TGG | - | chr5_3:8835536-8835555 | None:intergenic | 45.0% |
| GCTTGCACGTTATCGCTTAA+AGG | + | chr5_3:8835667-8835686 | Msa0796810:three_prime_UTR | 45.0% | |
| AAGGGAGATCTCACGGTTTA+GGG | - | chr5_3:8835698-8835717 | None:intergenic | 45.0% | |
| TAAGGGAGATCTCACGGTTT+AGG | - | chr5_3:8835699-8835718 | None:intergenic | 45.0% | |
| TACAAGTTGCCCCTGCTAAT+GGG | + | chr5_3:8835739-8835758 | Msa0796810:three_prime_UTR | 45.0% | |
| GGTAAGTAACCCATTAGCAG+GGG | - | chr5_3:8835751-8835770 | None:intergenic | 45.0% | |
| !! | TGTGGAGTTGGTATCGGTGT+TGG | + | chr5_3:8832227-8832246 | Msa0796810:CDS | 50.0% |
| GGGGAATTTCGGGGAGATTT+GGG | - | chr5_3:8832336-8832355 | None:intergenic | 50.0% | |
| AGGGGAATTTCGGGGAGATT+TGG | - | chr5_3:8832337-8832356 | None:intergenic | 50.0% | |
| ! | TGTGGAGTTGGTTTCGGTCA+TGG | + | chr5_3:8832692-8832711 | Msa0796810:CDS | 50.0% |
| ! | GTTGGTTTCGGTCATGGTGT+TGG | + | chr5_3:8832698-8832717 | Msa0796810:CDS | 50.0% |
| ! | TTCGGTCATGGTGTTGGAGT+TGG | + | chr5_3:8832704-8832723 | Msa0796810:CDS | 50.0% |
| !! | TTTTCAAAGCACCTCGGCAC+TGG | + | chr5_3:8833023-8833042 | Msa0796810:intron | 50.0% |
| CGACCCCACTTAAAGCGATA+AGG | - | chr5_3:8833126-8833145 | None:intergenic | 50.0% | |
| TTTAAGTGGGGTCGGCTACA+AGG | + | chr5_3:8833132-8833151 | Msa0796810:intron | 50.0% | |
| !! | ACAGGACTTGCTGTGAAACC+TGG | + | chr5_3:8833503-8833522 | Msa0796810:intron | 50.0% |
| !! | CAGGACTTGCTGTGAAACCT+GGG | + | chr5_3:8833504-8833523 | Msa0796810:intron | 50.0% |
| !! | AGGACTTGCTGTGAAACCTG+GGG | + | chr5_3:8833505-8833524 | Msa0796810:intron | 50.0% |
| GGCAATGCACCCGGATTAAA+CGG | - | chr5_3:8833694-8833713 | None:intergenic | 50.0% | |
| GTGGCACTTTGTAAGGATGC+TGG | - | chr5_3:8833715-8833734 | None:intergenic | 50.0% | |
| ! | GCATCCTTACAAAGTGCCAC+AGG | + | chr5_3:8833715-8833734 | Msa0796810:CDS | 50.0% |
| TGCACCTGTGGCACTTTGTA+AGG | - | chr5_3:8833722-8833741 | None:intergenic | 50.0% | |
| ! | CCACACTACGAGTTGGAACT+TGG | - | chr5_3:8834231-8834250 | None:intergenic | 50.0% |
| CCAAGTTCCAACTCGTAGTG+TGG | + | chr5_3:8834228-8834247 | Msa0796810:intron | 50.0% | |
| CTCATCTCCACACTACGAGT+TGG | - | chr5_3:8834238-8834257 | None:intergenic | 50.0% | |
| CTCGTAGTGTGGAGATGAGA+AGG | + | chr5_3:8834239-8834258 | Msa0796810:intron | 50.0% | |
| TCAGGCAAAGTAGCCTCCAA+AGG | + | chr5_3:8834273-8834292 | Msa0796810:intron | 50.0% | |
| CAGGCAAAGTAGCCTCCAAA+GGG | + | chr5_3:8834274-8834293 | Msa0796810:intron | 50.0% | |
| AATGGCACAAAGCCCTTTGG+AGG | - | chr5_3:8834289-8834308 | None:intergenic | 50.0% | |
| ! | TGACTTGTATCACGGCTCCT+AGG | + | chr5_3:8834309-8834328 | Msa0796810:intron | 50.0% |
| CACCACAATAGCAGCCATTG+CGG | - | chr5_3:8834470-8834489 | None:intergenic | 50.0% | |
| !! | TGCTATTGTGGTGGTGCTAC+TGG | + | chr5_3:8834477-8834496 | Msa0796810:intron | 50.0% |
| !! | TTGTGGTGGTGCTACTGGTA+TGG | + | chr5_3:8834482-8834501 | Msa0796810:intron | 50.0% |
| !! | GGTATGGTGGGTAGAAAGGA+TGG | + | chr5_3:8834498-8834517 | Msa0796810:intron | 50.0% |
| CAAGCTCATAGGGAGAGATG+GGG | - | chr5_3:8834594-8834613 | None:intergenic | 50.0% | |
| CCAAGCTCATAGGGAGAGAT+GGG | - | chr5_3:8834595-8834614 | None:intergenic | 50.0% | |
| ACCAAGCTCATAGGGAGAGA+TGG | - | chr5_3:8834596-8834615 | None:intergenic | 50.0% | |
| TGCACATGTCCTCTTCCTGT+AGG | + | chr5_3:8834917-8834936 | Msa0796810:intron | 50.0% | |
| ACTCACGAAAGAGGGAAGGT+GGG | - | chr5_3:8835196-8835215 | None:intergenic | 50.0% | |
| AACTCACGAAAGAGGGAAGG+TGG | - | chr5_3:8835197-8835216 | None:intergenic | 50.0% | |
| GCTTCGGCAGATACTAGTGA+AGG | + | chr5_3:8835499-8835518 | Msa0796810:CDS | 50.0% | |
| AGGGAGATCTCACGGTTTAG+GGG | - | chr5_3:8835697-8835716 | None:intergenic | 50.0% | |
| CATTAGCAGGGGCAACTTGT+AGG | - | chr5_3:8835740-8835759 | None:intergenic | 50.0% | |
| CTACAAGTTGCCCCTGCTAA+TGG | + | chr5_3:8835738-8835757 | Msa0796810:three_prime_UTR | 50.0% | |
| TACATGGGCAAGGGTCTGTT+TGG | + | chr5_3:8835923-8835942 | Msa0796810:three_prime_UTR | 50.0% | |
| AAGGGTCTGTTTGGTTGGAG+AGG | + | chr5_3:8835932-8835951 | Msa0796810:three_prime_UTR | 50.0% | |
| !! | GTGGGTGTTGGATGTGGAGT+TGG | + | chr5_3:8832680-8832699 | Msa0796810:CDS | 55.0% |
| ! | TTGTTAGGGTGCCACAACCG+CGG | + | chr5_3:8833271-8833290 | Msa0796810:intron | 55.0% |
| ATTTAGGCATGCCGCGGTTG+TGG | - | chr5_3:8833285-8833304 | None:intergenic | 55.0% | |
| CCAGAGATTTAGGCATGCCG+CGG | - | chr5_3:8833291-8833310 | None:intergenic | 55.0% | |
| AAGGATGCTGGCAATGCACC+CGG | - | chr5_3:8833703-8833722 | None:intergenic | 55.0% | |
| TCCAGAACTGACTGCACCTG+TGG | - | chr5_3:8833734-8833753 | None:intergenic | 55.0% | |
| CCTCCTTCTCCCTTCAACAG+TGG | - | chr5_3:8833928-8833947 | None:intergenic | 55.0% | |
| CCACTGTTGAAGGGAGAAGG+AGG | + | chr5_3:8833925-8833944 | Msa0796810:CDS | 55.0% | |
| CTGTTGAAGGGAGAAGGAGG+AGG | + | chr5_3:8833928-8833947 | Msa0796810:CDS | 55.0% | |
| ACAGCAATCGCAAGCCGCAA+TGG | + | chr5_3:8834453-8834472 | Msa0796810:intron | 55.0% | |
| AGCCGCAATGGCTGCTATTG+TGG | + | chr5_3:8834465-8834484 | Msa0796810:intron | 55.0% | |
| CGCAATGGCTGCTATTGTGG+TGG | + | chr5_3:8834468-8834487 | Msa0796810:intron | 55.0% | |
| !! | TGGTGGTGCTACTGGTATGG+TGG | + | chr5_3:8834485-8834504 | Msa0796810:intron | 55.0% |
| !! | GGTGGTGCTACTGGTATGGT+GGG | + | chr5_3:8834486-8834505 | Msa0796810:intron | 55.0% |
| CCCATCTCTCCCTATGAGCT+TGG | + | chr5_3:8834592-8834611 | Msa0796810:intron | 55.0% | |
| CAGACGATGCCTACAGGAAG+AGG | - | chr5_3:8834929-8834948 | None:intergenic | 55.0% | |
| CTCACGAAAGAGGGAAGGTG+GGG | - | chr5_3:8835195-8835214 | None:intergenic | 55.0% | |
| TGGGCAAGGGTCTGTTTGGT+TGG | + | chr5_3:8835927-8835946 | Msa0796810:three_prime_UTR | 55.0% | |
| ! | TCAAAGCACCTCGGCACTGG+AGG | + | chr5_3:8833026-8833045 | Msa0796810:intron | 60.0% |
| GATTGTAGCCTCCAGTGCCG+AGG | - | chr5_3:8833037-8833056 | None:intergenic | 60.0% | |
| CCGCGGCATGCCTAAATCTC+TGG | + | chr5_3:8833288-8833307 | Msa0796810:intron | 60.0% | |
| GCCACAGGTGCAGTCAGTTC+TGG | + | chr5_3:8833730-8833749 | Msa0796810:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 8831994 | 8835964 | 8831994 | ID=Msa0796810;Name=Msa0796810 |
| chr5_3 | mRNA | 8831994 | 8835964 | 8831994 | ID=Msa0796810-mRNA-1;Parent=Msa0796810;Name=Msa0796810-mRNA-1;_AED=0.18;_eAED=0.18;_QI=143|0.85|0.75|1|0.71|0.75|8|333|292 |
| chr5_3 | exon | 8831994 | 8832266 | 8831994 | ID=Msa0796810-mRNA-1:exon:3747;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8832479 | 8832567 | 8832479 | ID=Msa0796810-mRNA-1:exon:3748;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8832650 | 8832725 | 8832650 | ID=Msa0796810-mRNA-1:exon:3749;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8833507 | 8833556 | 8833507 | ID=Msa0796810-mRNA-1:exon:3750;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8833643 | 8833799 | 8833643 | ID=Msa0796810-mRNA-1:exon:3751;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8833809 | 8833963 | 8833809 | ID=Msa0796810-mRNA-1:exon:3752;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8835272 | 8835310 | 8835272 | ID=Msa0796810-mRNA-1:exon:3753;Parent=Msa0796810-mRNA-1 |
| chr5_3 | exon | 8835449 | 8835964 | 8835449 | ID=Msa0796810-mRNA-1:exon:3754;Parent=Msa0796810-mRNA-1 |
| chr5_3 | five_prime_UTR | 8831994 | 8832136 | 8831994 | ID=Msa0796810-mRNA-1:five_prime_utr;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8832137 | 8832266 | 8832137 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8832479 | 8832567 | 8832479 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8832650 | 8832725 | 8832650 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8833507 | 8833556 | 8833507 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8833643 | 8833799 | 8833643 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8833809 | 8833963 | 8833809 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8835272 | 8835310 | 8835272 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | CDS | 8835449 | 8835631 | 8835449 | ID=Msa0796810-mRNA-1:cds;Parent=Msa0796810-mRNA-1 |
| chr5_3 | three_prime_UTR | 8835632 | 8835964 | 8835632 | ID=Msa0796810-mRNA-1:three_prime_utr;Parent=Msa0796810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
