Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401290 | AAP33165.1 | 90.115 | 607 | 3 | 2 | 1 | 550 | 1 | 607 | 0.0 | 1098 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401290 | sp|Q06215|PPO_VICFA | 65.850 | 612 | 141 | 10 | 1 | 550 | 1 | 606 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401290 | Q7Y249 | 90.115 | 607 | 3 | 2 | 1 | 550 | 1 | 607 | 0.0 | 1098 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa1401290 | 0.816968 | 4.207044e-52 | -8.615850e-47 |
| Msa0023470 | Msa1401290 | 0.815158 | 1.067055e-51 | -8.615850e-47 |
| Msa0028660 | Msa1401290 | 0.806235 | 9.078223e-50 | -8.615850e-47 |
| Msa0037880 | Msa1401290 | 0.804119 | 2.517090e-49 | -8.615850e-47 |
| Msa0043980 | Msa1401290 | 0.820806 | 5.647077e-53 | -8.615850e-47 |
| Msa0074700 | Msa1401290 | 0.802433 | 5.623165e-49 | -8.615850e-47 |
| Msa0090100 | Msa1401290 | 0.822765 | 1.988789e-53 | -8.615850e-47 |
| Msa0092990 | Msa1401290 | 0.800408 | 1.461445e-48 | -8.615850e-47 |
| Msa1359040 | Msa1401290 | 0.800003 | 1.766577e-48 | -8.615850e-47 |
| Msa1371580 | Msa1401290 | 0.803841 | 2.874952e-49 | -8.615850e-47 |
| Msa1379710 | Msa1401290 | 0.806078 | 9.797263e-50 | -8.615850e-47 |
| Msa1390050 | Msa1401290 | 0.800306 | 1.532938e-48 | -8.615850e-47 |
| Msa1397120 | Msa1401290 | 0.834203 | 3.432908e-56 | -8.615850e-47 |
| Msa1401290 | Msa1403890 | 0.830151 | 3.450836e-55 | -8.615850e-47 |
| Msa1401290 | Msa1407600 | 0.805738 | 1.154882e-49 | -8.615850e-47 |
| Msa1401290 | Msa1424450 | 0.816557 | 5.199791e-52 | -8.615850e-47 |
| Msa1401290 | Msa1425100 | 0.805879 | 1.078356e-49 | -8.615850e-47 |
| Msa1401290 | Msa1427230 | 0.822953 | 1.797862e-53 | -8.615850e-47 |
| Msa1401290 | Msa1430680 | 0.825099 | 5.637864e-54 | -8.615850e-47 |
| Msa1401290 | Msa1434350 | 0.802138 | 6.466757e-49 | -8.615850e-47 |
| Msa1401290 | Msa1435370 | 0.800002 | 1.767401e-48 | -8.615850e-47 |
| Msa1401290 | Msa1444740 | 0.839560 | 1.473399e-57 | -8.615850e-47 |
| Msa1401290 | Msa1460830 | 0.820046 | 8.435906e-53 | -8.615850e-47 |
| Msa1401290 | Msa1462840 | 0.985514 | 8.367531e-164 | -8.615850e-47 |
| Msa1401290 | Msa1466730 | 0.802614 | 5.159965e-49 | -8.615850e-47 |
| Msa0607050 | Msa1401290 | 0.802436 | 5.616196e-49 | -8.615850e-47 |
| Msa0608710 | Msa1401290 | 0.837320 | 5.573334e-57 | -8.615850e-47 |
| Msa0610430 | Msa1401290 | 0.821702 | 3.507667e-53 | -8.615850e-47 |
| Msa0615310 | Msa1401290 | 0.809902 | 1.504231e-50 | -8.615850e-47 |
| Msa0620960 | Msa1401290 | 0.809117 | 2.217011e-50 | -8.615850e-47 |
| Msa0638070 | Msa1401290 | 0.801542 | 8.570840e-49 | -8.615850e-47 |
| Msa0647830 | Msa1401290 | 0.806988 | 6.296182e-50 | -8.615850e-47 |
| Msa0649490 | Msa1401290 | 0.807866 | 4.099134e-50 | -8.615850e-47 |
| Msa0653490 | Msa1401290 | 0.826573 | 2.519475e-54 | -8.615850e-47 |
| Msa0654720 | Msa1401290 | 0.826439 | 2.711603e-54 | -8.615850e-47 |
| Msa0657970 | Msa1401290 | 0.804033 | 2.622427e-49 | -8.615850e-47 |
| Msa0673460 | Msa1401290 | 0.822211 | 2.675063e-53 | -8.615850e-47 |
| Msa0684330 | Msa1401290 | 0.814654 | 1.379963e-51 | -8.615850e-47 |
| Msa0685360 | Msa1401290 | 0.807837 | 4.158577e-50 | -8.615850e-47 |
| Msa0693380 | Msa1401290 | 0.802379 | 5.769399e-49 | -8.615850e-47 |
| Msa0698360 | Msa1401290 | 0.824758 | 6.786866e-54 | -8.615850e-47 |
| Msa0711100 | Msa1401290 | 0.801196 | 1.009413e-48 | -8.615850e-47 |
| Msa0731180 | Msa1401290 | 0.855906 | 4.605020e-62 | -8.615850e-47 |
| Msa0750430 | Msa1401290 | 0.812006 | 5.268302e-51 | -8.615850e-47 |
| Msa0771580 | Msa1401290 | 0.828944 | 6.783113e-55 | -8.615850e-47 |
| Msa0771720 | Msa1401290 | 0.857970 | 1.135542e-62 | -8.615850e-47 |
| Msa0773840 | Msa1401290 | 0.827834 | 1.257007e-54 | -8.615850e-47 |
| Msa0795080 | Msa1401290 | 0.827709 | 1.346596e-54 | -8.615850e-47 |
| Msa0832150 | Msa1401290 | 0.806712 | 7.200508e-50 | -8.615850e-47 |
| Msa0147920 | Msa1401290 | 0.850269 | 1.893841e-60 | -8.615850e-47 |
| Msa0178860 | Msa1401290 | -0.806037 | 9.989621e-50 | -8.615850e-47 |
| Msa0191910 | Msa1401290 | 0.991757 | 2.240251e-189 | -8.615850e-47 |
| Msa0206010 | Msa1401290 | 0.823677 | 1.217690e-53 | -8.615850e-47 |
| Msa0216530 | Msa1401290 | 0.820721 | 5.906481e-53 | -8.615850e-47 |
| Msa0217680 | Msa1401290 | 0.833424 | 5.374497e-56 | -8.615850e-47 |
| Msa0223010 | Msa1401290 | 0.805229 | 1.476557e-49 | -8.615850e-47 |
| Msa0234020 | Msa1401290 | 0.979884 | 5.877155e-149 | -8.615850e-47 |
| Msa1233500 | Msa1401290 | 0.821329 | 4.279306e-53 | -8.615850e-47 |
| Msa1233890 | Msa1401290 | 0.808571 | 2.900849e-50 | -8.615850e-47 |
| Msa1240180 | Msa1401290 | 0.801288 | 9.665895e-49 | -8.615850e-47 |
| Msa1247250 | Msa1401290 | 0.803673 | 3.115352e-49 | -8.615850e-47 |
| Msa1249240 | Msa1401290 | 0.818441 | 1.957564e-52 | -8.615850e-47 |
| Msa1250890 | Msa1401290 | 0.833714 | 4.550704e-56 | -8.615850e-47 |
| Msa1276440 | Msa1401290 | 0.826200 | 3.091697e-54 | -8.615850e-47 |
| Msa1279210 | Msa1401290 | 0.807574 | 4.730335e-50 | -8.615850e-47 |
| Msa1304840 | Msa1401290 | 0.818750 | 1.665009e-52 | -8.615850e-47 |
| Msa1305340 | Msa1401290 | 0.808954 | 2.402887e-50 | -8.615850e-47 |
| Msa1305660 | Msa1401290 | 0.806037 | 9.992843e-50 | -8.615850e-47 |
| Msa1306840 | Msa1401290 | 0.810073 | 1.381432e-50 | -8.615850e-47 |
| Msa1307740 | Msa1401290 | 0.819851 | 9.345217e-53 | -8.615850e-47 |
| Msa1314340 | Msa1401290 | 0.815372 | 9.564389e-52 | -8.615850e-47 |
| Msa1320620 | Msa1401290 | 0.804516 | 2.080279e-49 | -8.615850e-47 |
| Msa1322190 | Msa1401290 | 0.802333 | 5.896792e-49 | -8.615850e-47 |
| Msa1327550 | Msa1401290 | 0.807032 | 6.160703e-50 | -8.615850e-47 |
| Msa1333410 | Msa1401290 | 0.832788 | 7.742227e-56 | -8.615850e-47 |
| Msa0376910 | Msa1401290 | 0.830164 | 3.425682e-55 | -8.615850e-47 |
| Msa0379640 | Msa1401290 | 0.823655 | 1.232195e-53 | -8.615850e-47 |
| Msa0383800 | Msa1401290 | 0.800816 | 1.206726e-48 | -8.615850e-47 |
| Msa0389810 | Msa1401290 | 0.827684 | 1.365820e-54 | -8.615850e-47 |
| Msa0399340 | Msa1401290 | 0.804507 | 2.089353e-49 | -8.615850e-47 |
| Msa0404030 | Msa1401290 | 0.802595 | 5.207176e-49 | -8.615850e-47 |
| Msa0412840 | Msa1401290 | 0.808556 | 2.922346e-50 | -8.615850e-47 |
| Msa0433360 | Msa1401290 | 0.813174 | 2.924794e-51 | -8.615850e-47 |
| Msa0436760 | Msa1401290 | 0.804205 | 2.415593e-49 | -8.615850e-47 |
| Msa0442200 | Msa1401290 | 0.811364 | 7.265678e-51 | -8.615850e-47 |
| Msa0468130 | Msa1401290 | 0.829998 | 3.760687e-55 | -8.615850e-47 |
| Msa0469990 | Msa1401290 | 0.811020 | 8.627939e-51 | -8.615850e-47 |
| Msa0471900 | Msa1401290 | 0.815960 | 7.071471e-52 | -8.615850e-47 |
| Msa0477080 | Msa1401290 | 0.830984 | 2.158688e-55 | -8.615850e-47 |
| Msa0477130 | Msa1401290 | -0.821394 | 4.133017e-53 | -8.615850e-47 |
| Msa0479970 | Msa1401290 | 0.811920 | 5.500684e-51 | -8.615850e-47 |
| Msa0982270 | Msa1401290 | 0.826570 | 2.523374e-54 | -8.615850e-47 |
| Msa1002480 | Msa1401290 | 0.822708 | 2.049928e-53 | -8.615850e-47 |
| Msa1008460 | Msa1401290 | 0.801837 | 7.456926e-49 | -8.615850e-47 |
| Msa1023920 | Msa1401290 | 0.816618 | 5.039286e-52 | -8.615850e-47 |
| Msa1034150 | Msa1401290 | 0.806021 | 1.007047e-49 | -8.615850e-47 |
| Msa1039880 | Msa1401290 | 0.800111 | 1.680088e-48 | -8.615850e-47 |
| Msa1055680 | Msa1401290 | 0.801710 | 7.918023e-49 | -8.615850e-47 |
| Msa1063510 | Msa1401290 | 0.816817 | 4.548812e-52 | -8.615850e-47 |
| Msa1082500 | Msa1401290 | 0.840866 | 6.717258e-58 | -8.615850e-47 |
| Msa1098400 | Msa1401290 | 0.800975 | 1.120009e-48 | -8.615850e-47 |
| Msa1098420 | Msa1401290 | 0.806926 | 6.488478e-50 | -8.615850e-47 |
| Msa1102790 | Msa1401290 | 0.802460 | 5.552575e-49 | -8.615850e-47 |
| Msa0287410 | Msa1401290 | 0.833959 | 3.951239e-56 | -8.615850e-47 |
| Msa0291500 | Msa1401290 | 0.803317 | 3.693272e-49 | -8.615850e-47 |
| Msa0307950 | Msa1401290 | 0.812612 | 3.883357e-51 | -8.615850e-47 |
| Msa0309550 | Msa1401290 | 0.810543 | 1.093839e-50 | -8.615850e-47 |
| Msa0319170 | Msa1401290 | 0.823605 | 1.265900e-53 | -8.615850e-47 |
| Msa0326110 | Msa1401290 | 0.828912 | 6.906812e-55 | -8.615850e-47 |
| Msa0339620 | Msa1401290 | 0.807227 | 5.603833e-50 | -8.615850e-47 |
| Msa0357760 | Msa1401290 | 0.803175 | 3.952667e-49 | -8.615850e-47 |
| Msa1107900 | Msa1401290 | 0.813800 | 2.130708e-51 | -8.615850e-47 |
| Msa1131220 | Msa1401290 | 0.810866 | 9.314621e-51 | -8.615850e-47 |
| Msa1197410 | Msa1401290 | 0.802909 | 4.486014e-49 | -8.615850e-47 |
| Msa1201560 | Msa1401290 | 0.809659 | 1.695943e-50 | -8.615850e-47 |
| Msa1217810 | Msa1401290 | 0.805951 | 1.041875e-49 | -8.615850e-47 |
| Msa0484720 | Msa1401290 | 0.802799 | 4.727232e-49 | -8.615850e-47 |
| Msa0484780 | Msa1401290 | 0.828402 | 9.169309e-55 | -8.615850e-47 |
| Msa0485120 | Msa1401290 | 0.801029 | 1.091656e-48 | -8.615850e-47 |
| Msa0493630 | Msa1401290 | 0.830116 | 3.520438e-55 | -8.615850e-47 |
| Msa0502100 | Msa1401290 | 0.824200 | 9.180192e-54 | -8.615850e-47 |
| Msa0519740 | Msa1401290 | 0.801573 | 8.449412e-49 | -8.615850e-47 |
| Msa0521430 | Msa1401290 | 0.820394 | 7.021799e-53 | -8.615850e-47 |
| Msa0527250 | Msa1401290 | 0.803903 | 2.791189e-49 | -8.615850e-47 |
| Msa0553460 | Msa1401290 | 0.812458 | 4.196446e-51 | -8.615850e-47 |
| Msa0561130 | Msa1401290 | -0.809607 | 1.740902e-50 | -8.615850e-47 |
| Msa0561230 | Msa1401290 | 0.822569 | 2.208291e-53 | -8.615850e-47 |
| Msa0575470 | Msa1401290 | 0.824154 | 9.414174e-54 | -8.615850e-47 |
| Msa0577500 | Msa1401290 | 0.808231 | 3.427906e-50 | -8.615850e-47 |
| Msa0579130 | Msa1401290 | 0.801147 | 1.032871e-48 | -8.615850e-47 |
| Msa0599580 | Msa1401290 | 0.802687 | 4.983697e-49 | -8.615850e-47 |
| Msa0869120 | Msa1401290 | 0.819150 | 1.350994e-52 | -8.615850e-47 |
| Msa0876580 | Msa1401290 | 0.816213 | 6.210784e-52 | -8.615850e-47 |
| Msa0971020 | Msa1401290 | 0.803728 | 3.035003e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401290 | MtrunA17_Chr2g0281801 | 84.158 | 606 | 38 | 3 | 2 | 550 | 3 | 607 | 0.0 | 972 |
| Msa1401290 | MtrunA17_Chr4g0015101 | 72.268 | 613 | 98 | 8 | 1 | 549 | 1 | 605 | 0.0 | 837 |
| Msa1401290 | MtrunA17_Chr2g0281811 | 72.594 | 613 | 98 | 7 | 1 | 549 | 1 | 607 | 0.0 | 807 |
| Msa1401290 | MtrunA17_Chr4g0015121 | 71.648 | 261 | 25 | 3 | 1 | 216 | 1 | 257 | 2.29e-120 | 363 |
| Msa1401290 | MtrunA17_Chr4g0015121 | 63.258 | 264 | 33 | 5 | 294 | 532 | 256 | 480 | 6.19e-90 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 134 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTTTGCTTTGCCATTT+TGG | 0.094294 | tig0022505:-97995 | Msa1401290:CDS |
| TGTTGTTCTTGCTCTTCTTT+AGG | 0.145727 | tig0022505:+98514 | None:intergenic |
| AGAAGACTAATAGTTGTTTA+AGG | 0.156260 | tig0022505:-97018 | Msa1401290:CDS |
| CCAGCAAACTCCGTATTAAT+TGG | 0.212601 | tig0022505:+97085 | None:intergenic |
| TTCTTGCTCCTTGATTTCTT+TGG | 0.230170 | tig0022505:+97220 | None:intergenic |
| GTTGTTCTTGCTCTTCTTTA+GGG | 0.239224 | tig0022505:+98515 | None:intergenic |
| GAAAGGTCGGGAGGGGAAAT+TGG | 0.243755 | tig0022505:+98400 | None:intergenic |
| GCTCTTCTTTAGGGTTGTTT+TGG | 0.254211 | tig0022505:+98524 | None:intergenic |
| ACGGATTTGTTGGAAGATTT+AGG | 0.255790 | tig0022505:-96986 | Msa1401290:CDS |
| ATTCAAATATTGATAGGTTT+TGG | 0.275330 | tig0022505:-97581 | Msa1401290:CDS |
| TGATGTACTGTCGGCGTAAA+TGG | 0.281215 | tig0022505:+97938 | None:intergenic |
| TGCTGCTTGTCTTACCCTTA+AGG | 0.296185 | tig0022505:+98267 | None:intergenic |
| TGTTACGTGTCCATTGGTTT+TGG | 0.301487 | tig0022505:-97272 | Msa1401290:CDS |
| GAAGACTAATAGTTGTTTAA+GGG | 0.324028 | tig0022505:-97017 | Msa1401290:CDS |
| ATTGAGTTTGATAAGAGTTT+AGG | 0.335970 | tig0022505:-97157 | Msa1401290:CDS |
| GCTGCTTGTCTTACCCTTAA+GGG | 0.339143 | tig0022505:+98268 | None:intergenic |
| CCAATTAATACGGAGTTTGC+TGG | 0.344275 | tig0022505:-97085 | Msa1401290:CDS |
| AAGATTTCAAAGACAAAGAT+TGG | 0.346760 | tig0022505:-97527 | Msa1401290:CDS |
| AAAACATTGTTGTAGGAAAT+AGG | 0.348303 | tig0022505:-98492 | Msa1401290:CDS |
| TTCATCAAATCAACCCTTAA+GGG | 0.351711 | tig0022505:-98281 | Msa1401290:CDS |
| AATAGGAGGAATGTTCTAAT+TGG | 0.356586 | tig0022505:-98475 | Msa1401290:CDS |
| ATTGGCCTTGGAGGACTTTG+TGG | 0.360187 | tig0022505:-98457 | Msa1401290:CDS |
| CTCACCATTCAAATATTGAT+AGG | 0.360856 | tig0022505:-97587 | Msa1401290:CDS |
| CTTCATCAAATCAACCCTTA+AGG | 0.361728 | tig0022505:-98282 | Msa1401290:CDS |
| TTGTTTAAGGGTTGGATTAA+CGG | 0.362141 | tig0022505:-97005 | Msa1401290:CDS |
| GTTACTTTGGTTCCAAGGTA+TGG | 0.381312 | tig0022505:-96938 | Msa1401290:CDS |
| CATTAATGATGAAGATGATA+AGG | 0.389930 | tig0022505:-97116 | Msa1401290:CDS |
| TCCATGTGGAACATTCTCTA+TGG | 0.390806 | tig0022505:+97701 | None:intergenic |
| GGAGAGTCGTAGTTCCAAAA+TGG | 0.399283 | tig0022505:+97981 | None:intergenic |
| TACCACTGAATGTGATTACT+TGG | 0.400770 | tig0022505:+98557 | None:intergenic |
| GGTTGGATTAACGGATTTGT+TGG | 0.401538 | tig0022505:-96996 | Msa1401290:CDS |
| GAACAACAAAACATTGTTGT+AGG | 0.404778 | tig0022505:-98499 | Msa1401290:CDS |
| TAAGAATCTTGTGAAGGTTA+AGG | 0.414983 | tig0022505:-97472 | Msa1401290:CDS |
| TGGAACTACGACTCTCCTAA+TGG | 0.417955 | tig0022505:-97975 | Msa1401290:CDS |
| AGGAATGTTCTAATTGGCCT+TGG | 0.425473 | tig0022505:-98469 | Msa1401290:CDS |
| TTTGTCTATACATTGTAGTA+AGG | 0.426525 | tig0022505:+97805 | None:intergenic |
| ATTGTTTGGTGTTGCACCTA+AGG | 0.429664 | tig0022505:+98354 | None:intergenic |
| GGAGAAAGAAGAAGAGGAAG+AGG | 0.440966 | tig0022505:-97197 | Msa1401290:CDS |
| GAGGGAAGTTGCATGCCATT+AGG | 0.441891 | tig0022505:+97960 | None:intergenic |
| GGTGATTAAGCCAATTAATA+CGG | 0.446630 | tig0022505:-97095 | Msa1401290:CDS |
| GGACAACAATTAATATTGTT+TGG | 0.448332 | tig0022505:+98340 | None:intergenic |
| GTAAGGCTTTCATGAGTTCA+AGG | 0.448450 | tig0022505:+98203 | None:intergenic |
| TACAAAACTACGTGGATCAC+TGG | 0.449934 | tig0022505:+98177 | None:intergenic |
| ATTGGAGAAGCTAGGGCAAA+AGG | 0.452064 | tig0022505:+98418 | None:intergenic |
| CACATGGACCAGTTCATAGA+TGG | 0.452517 | tig0022505:-97686 | Msa1401290:CDS |
| CTTAAGGGTTGATTTGATGA+AGG | 0.453951 | tig0022505:+98283 | None:intergenic |
| TGTGAAAATGGATGCGAAGA+AGG | 0.454166 | tig0022505:+98622 | None:intergenic |
| ACCATGGAATATCAACATCT+TGG | 0.455528 | tig0022505:+97409 | None:intergenic |
| GTGAAAATGGATGCGAAGAA+GGG | 0.456815 | tig0022505:+98623 | None:intergenic |
| GACATTGATTGTGTTAATGA+AGG | 0.456891 | tig0022505:+98666 | None:intergenic |
| ACTAATAGTTGTTTAAGGGT+TGG | 0.457888 | tig0022505:-97013 | Msa1401290:CDS |
| TTCTCTATGGATCCAGCACC+AGG | 0.458069 | tig0022505:+97714 | None:intergenic |
| TACTACAATGTATAGACAAA+TGG | 0.458391 | tig0022505:-97802 | Msa1401290:CDS |
| GGACCACATGTGGAAAGGTC+GGG | 0.458660 | tig0022505:+98388 | None:intergenic |
| ACAATTCCTTTCCCATACCT+TGG | 0.467192 | tig0022505:+96926 | None:intergenic |
| AATGTTCTAATTGGCCTTGG+AGG | 0.476202 | tig0022505:-98466 | Msa1401290:CDS |
| CAAGAAGGAGAAAGAAGAAG+AGG | 0.479890 | tig0022505:-97203 | Msa1401290:CDS |
| TCACCACTCCATCTATGAAC+TGG | 0.479921 | tig0022505:+97678 | None:intergenic |
| AGCTAGGGCAAAAGGGTTAG+TGG | 0.480736 | tig0022505:+98426 | None:intergenic |
| TTTAAGTCTATGAGTGTTGG+AGG | 0.482226 | tig0022505:+97879 | None:intergenic |
| ACCAAGATGTTGATATTCCA+TGG | 0.489583 | tig0022505:-97410 | Msa1401290:CDS |
| ACATGTGGAAAGGTCGGGAG+GGG | 0.493375 | tig0022505:+98393 | None:intergenic |
| ATACATTGTAGTAAGGTTTG+AGG | 0.494060 | tig0022505:+97812 | None:intergenic |
| ATGGATCCAGCACCAGGATC+GGG | 0.501520 | tig0022505:+97720 | None:intergenic |
| TTACTTTGGTTCCAAGGTAT+GGG | 0.503602 | tig0022505:-96937 | Msa1401290:CDS |
| TTGTGGTTACTTTGGTTCCA+AGG | 0.504871 | tig0022505:-96943 | Msa1401290:CDS |
| GATGAACCCGATCCTGGTGC+TGG | 0.506025 | tig0022505:-97726 | Msa1401290:CDS |
| CTCGGAAGCTCTTATCGTGC+CGG | 0.506112 | tig0022505:-97750 | Msa1401290:CDS |
| TGATAGCATTGTGGTTACTT+TGG | 0.510624 | tig0022505:-96951 | Msa1401290:CDS |
| GAGGTTGATGACTAGCGGTT+CGG | 0.511134 | tig0022505:+97898 | None:intergenic |
| AGAAGGGGAAATCTTTGAGT+TGG | 0.512161 | tig0022505:+98639 | None:intergenic |
| GCCGGTGATGAACCCGATCC+TGG | 0.512406 | tig0022505:-97732 | Msa1401290:CDS |
| GGTCCACCGGATCTACCCTT+AGG | 0.513048 | tig0022505:-98370 | Msa1401290:CDS |
| AAAACCTATCAATATTTGAA+TGG | 0.514138 | tig0022505:+97583 | None:intergenic |
| TTGTGATCATGGGAAGAATG+AGG | 0.516496 | tig0022505:+97046 | None:intergenic |
| GTTCGGAGTTTGTCGTAAAG+AGG | 0.519726 | tig0022505:+97915 | None:intergenic |
| GATGTTGATGATGATGCAAA+TGG | 0.521124 | tig0022505:-97843 | Msa1401290:CDS |
| AATGTGATTACTTGGCGTCT+TGG | 0.521989 | tig0022505:+98565 | None:intergenic |
| TATAGACAAATGGTCTCAAA+CGG | 0.524321 | tig0022505:-97792 | Msa1401290:CDS |
| TGAAGAGGCCAAAGAAATCA+AGG | 0.524353 | tig0022505:-97228 | Msa1401290:CDS |
| ACCAGGATCGGGTTCATCAC+CGG | 0.526470 | tig0022505:+97731 | None:intergenic |
| CCTTTCCACATGTGGTCCAC+CGG | 0.527586 | tig0022505:-98383 | Msa1401290:CDS |
| CAAAATGGCAAAGCAAAGGT+TGG | 0.533090 | tig0022505:+97996 | None:intergenic |
| GTTGCACCTAAGGGTAGATC+CGG | 0.534058 | tig0022505:+98364 | None:intergenic |
| TATGGATCCAGCACCAGGAT+CGG | 0.534663 | tig0022505:+97719 | None:intergenic |
| TTGGAGAAGCTAGGGCAAAA+GGG | 0.536024 | tig0022505:+98419 | None:intergenic |
| GAGTTATGTTACGTGTCCAT+TGG | 0.537060 | tig0022505:-97278 | Msa1401290:CDS |
| CCACATGTGGAAAGGTCGGG+AGG | 0.538572 | tig0022505:+98391 | None:intergenic |
| AAGTTTAAGTCTATGAGTGT+TGG | 0.542990 | tig0022505:+97876 | None:intergenic |
| TGATTGTGTTAATGAAGGCA+AGG | 0.544583 | tig0022505:+98671 | None:intergenic |
| ACGTGGATCACTGGATGGTA+AGG | 0.547230 | tig0022505:+98186 | None:intergenic |
| GCAACCTAACTTTGAAAACA+TGG | 0.554305 | tig0022505:-97649 | Msa1401290:CDS |
| GTTGGAAGATTTAGGAGCTG+AGG | 0.554915 | tig0022505:-96978 | Msa1401290:CDS |
| CCTCCCGACCTTTCCACATG+TGG | 0.563094 | tig0022505:-98391 | Msa1401290:CDS |
| CACATGTGGAAAGGTCGGGA+GGG | 0.565843 | tig0022505:+98392 | None:intergenic |
| AAAGAAATCAAGGAGCAAGA+AGG | 0.566088 | tig0022505:-97218 | Msa1401290:CDS |
| TGGACCACATGTGGAAAGGT+CGG | 0.567741 | tig0022505:+98387 | None:intergenic |
| TCTATATGGAAAACACTTGG+TGG | 0.568653 | tig0022505:-97558 | Msa1401290:CDS |
| CTATATGGAAAACACTTGGT+GGG | 0.577886 | tig0022505:-97557 | Msa1401290:CDS |
| ACAACATTATCCAAAACCAA+TGG | 0.579529 | tig0022505:+97262 | None:intergenic |
| TTGGTTCCAAGGTATGGGAA+AGG | 0.581052 | tig0022505:-96932 | Msa1401290:CDS |
| TGTACTGTCGGCGTAAATGG+AGG | 0.581530 | tig0022505:+97941 | None:intergenic |
| ATCCATTGTGCTTATTGTGA+TGG | 0.582664 | tig0022505:-98142 | Msa1401290:intron |
| TTGTTTGGTGTTGCACCTAA+GGG | 0.584388 | tig0022505:+98355 | None:intergenic |
| TAGATCCGGTGGACCACATG+TGG | 0.585860 | tig0022505:+98378 | None:intergenic |
| AGGGGAAATTGGAGAAGCTA+GGG | 0.590414 | tig0022505:+98411 | None:intergenic |
| GAGGGGAAATTGGAGAAGCT+AGG | 0.590748 | tig0022505:+98410 | None:intergenic |
| TGAAAATGGATGCGAAGAAG+GGG | 0.592532 | tig0022505:+98624 | None:intergenic |
| TAAGGCTTTCATGAGTTCAA+GGG | 0.593472 | tig0022505:+98204 | None:intergenic |
| TTGTTAGTACAATTGTGAAG+AGG | 0.594333 | tig0022505:-97243 | Msa1401290:CDS |
| TGGTCTATATGGAAAACACT+TGG | 0.595881 | tig0022505:-97561 | Msa1401290:CDS |
| TGAAAATAAGAATCTTGTGA+AGG | 0.601196 | tig0022505:-97478 | Msa1401290:CDS |
| CCGGTGGACCACATGTGGAA+AGG | 0.609583 | tig0022505:+98383 | None:intergenic |
| CGCCAAGTAATCACATTCAG+TGG | 0.612736 | tig0022505:-98559 | Msa1401290:CDS |
| CGGCACGATAAGAGCTTCCG+AGG | 0.613285 | tig0022505:+97751 | None:intergenic |
| AAACTACGTGGATCACTGGA+TGG | 0.614635 | tig0022505:+98181 | None:intergenic |
| GTACTGTCGGCGTAAATGGA+GGG | 0.618793 | tig0022505:+97942 | None:intergenic |
| TTAGGTTTAGCATTTAACCA+TGG | 0.619630 | tig0022505:+97393 | None:intergenic |
| GCACCTAAGGGTAGATCCGG+TGG | 0.622516 | tig0022505:+98367 | None:intergenic |
| GTTCCAAAATGGCAAAGCAA+AGG | 0.631068 | tig0022505:+97992 | None:intergenic |
| GTAAAGAGGTGATGTACTGT+CGG | 0.631500 | tig0022505:+97929 | None:intergenic |
| CAACCTAACTTTGAAAACAT+GGG | 0.632027 | tig0022505:-97648 | Msa1401290:CDS |
| CACCATCACAATAAGCACAA+TGG | 0.632308 | tig0022505:+98140 | None:intergenic |
| GGACCAGTTCATAGATGGAG+TGG | 0.632855 | tig0022505:-97681 | Msa1401290:CDS |
| GATTGTGTTAATGAAGGCAA+GGG | 0.634167 | tig0022505:+98672 | None:intergenic |
| CATCTATGAACTGGTCCATG+TGG | 0.636161 | tig0022505:+97687 | None:intergenic |
| AAGTACCACAAAGTCCTCCA+AGG | 0.662236 | tig0022505:+98452 | None:intergenic |
| TGTTGGAGGTTGATGACTAG+CGG | 0.671745 | tig0022505:+97893 | None:intergenic |
| TCCATAGAGAATGTTCCACA+TGG | 0.674858 | tig0022505:-97702 | Msa1401290:CDS |
| GCTTGTTGTACAAAACTACG+TGG | 0.685420 | tig0022505:+98169 | None:intergenic |
| ACATTGTTGTAGGAAATAGG+AGG | 0.694266 | tig0022505:-98489 | Msa1401290:CDS |
| GTGCAAGTGAGATTAACTCA+AGG | 0.695549 | tig0022505:-97300 | Msa1401290:CDS |
| TGAGGATGATGATAGCATTG+TGG | 0.720047 | tig0022505:-96960 | Msa1401290:CDS |
| ATTGTGTTAATGAAGGCAAG+GGG | 0.729284 | tig0022505:+98673 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATACAAAAAAATG+TGG | - | tig0022505:98216-98235 | Msa1401290:CDS | 10.0% |
| !! | AAAAAATATACAAAAAAATG+TGG | - | tig0022505:98216-98235 | Msa1401290:CDS | 10.0% |
| !!! | TTTGTAATTTATGATTTTTG+TGG | + | tig0022505:97271-97290 | None:intergenic | 15.0% |
| !!! | TTTTGTATATTTTTTCTACA+TGG | + | tig0022505:98211-98230 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTATGATTTTTG+TGG | + | tig0022505:97271-97290 | None:intergenic | 15.0% |
| !!! | TTTTGTATATTTTTTCTACA+TGG | + | tig0022505:98211-98230 | None:intergenic | 15.0% |
| !!! | TTTTGTTGTTTTTGTGAAAA+TGG | + | tig0022505:96970-96989 | None:intergenic | 20.0% |
| !!! | TTTATGATTTTTGTGGAATT+TGG | + | tig0022505:97264-97283 | None:intergenic | 20.0% |
| !! | AGATTCTTTCATAGAAATAA+AGG | + | tig0022505:97541-97560 | None:intergenic | 20.0% |
| !!! | TATTTCTATGAAAGAATCTT+AGG | - | tig0022505:97542-97561 | Msa1401290:CDS | 20.0% |
| !! | AAAACCTATCAATATTTGAA+TGG | + | tig0022505:97997-98016 | None:intergenic | 20.0% |
| !!! | ATTCAAATATTGATAGGTTT+TGG | - | tig0022505:97996-98015 | Msa1401290:CDS | 20.0% |
| !!! | ATATTTTTTCTACATGGTTT+AGG | + | tig0022505:98205-98224 | None:intergenic | 20.0% |
| !!! | TTTTGTTGTTTTTGTGAAAA+TGG | + | tig0022505:96970-96989 | None:intergenic | 20.0% |
| !!! | TTTATGATTTTTGTGGAATT+TGG | + | tig0022505:97264-97283 | None:intergenic | 20.0% |
| !! | AGATTCTTTCATAGAAATAA+AGG | + | tig0022505:97541-97560 | None:intergenic | 20.0% |
| !!! | TATTTCTATGAAAGAATCTT+AGG | - | tig0022505:97542-97561 | Msa1401290:CDS | 20.0% |
| !! | AAAACCTATCAATATTTGAA+TGG | + | tig0022505:97997-98016 | None:intergenic | 20.0% |
| !!! | ATTCAAATATTGATAGGTTT+TGG | - | tig0022505:97996-98015 | Msa1401290:CDS | 20.0% |
| !!! | ATATTTTTTCTACATGGTTT+AGG | + | tig0022505:98205-98224 | None:intergenic | 20.0% |
| ! | AAAACATTGTTGTAGGAAAT+AGG | - | tig0022505:97085-97104 | Msa1401290:CDS | 25.0% |
| ! | GGACAACAATTAATATTGTT+TGG | + | tig0022505:97240-97259 | None:intergenic | 25.0% |
| ! | TTTGTCTATACATTGTAGTA+AGG | + | tig0022505:97775-97794 | None:intergenic | 25.0% |
| ! | TACTACAATGTATAGACAAA+TGG | - | tig0022505:97775-97794 | Msa1401290:CDS | 25.0% |
| ! | AAGATTTCAAAGACAAAGAT+TGG | - | tig0022505:98050-98069 | Msa1401290:intron | 25.0% |
| ! | TGAAAATAAGAATCTTGTGA+AGG | - | tig0022505:98099-98118 | Msa1401290:intron | 25.0% |
| ! | TGTCTTGACACAAAAAAATT+AGG | - | tig0022505:98136-98155 | Msa1401290:intron | 25.0% |
| !!! | ACAAGGAAATTTTTTGGTAT+TGG | - | tig0022505:98246-98265 | Msa1401290:CDS | 25.0% |
| ! | ATTGAGTTTGATAAGAGTTT+AGG | - | tig0022505:98420-98439 | Msa1401290:CDS | 25.0% |
| ! | CATTAATGATGAAGATGATA+AGG | - | tig0022505:98461-98480 | Msa1401290:CDS | 25.0% |
| ! | AGAAGACTAATAGTTGTTTA+AGG | - | tig0022505:98559-98578 | Msa1401290:CDS | 25.0% |
| ! | GAAGACTAATAGTTGTTTAA+GGG | - | tig0022505:98560-98579 | Msa1401290:CDS | 25.0% |
| ! | AAAACATTGTTGTAGGAAAT+AGG | - | tig0022505:97085-97104 | Msa1401290:CDS | 25.0% |
| ! | GGACAACAATTAATATTGTT+TGG | + | tig0022505:97240-97259 | None:intergenic | 25.0% |
| ! | TTTGTCTATACATTGTAGTA+AGG | + | tig0022505:97775-97794 | None:intergenic | 25.0% |
| ! | TACTACAATGTATAGACAAA+TGG | - | tig0022505:97775-97794 | Msa1401290:CDS | 25.0% |
| ! | AAGATTTCAAAGACAAAGAT+TGG | - | tig0022505:98050-98069 | Msa1401290:intron | 25.0% |
| ! | TGAAAATAAGAATCTTGTGA+AGG | - | tig0022505:98099-98118 | Msa1401290:intron | 25.0% |
| ! | TGTCTTGACACAAAAAAATT+AGG | - | tig0022505:98136-98155 | Msa1401290:intron | 25.0% |
| !!! | ACAAGGAAATTTTTTGGTAT+TGG | - | tig0022505:98246-98265 | Msa1401290:CDS | 25.0% |
| ! | ATTGAGTTTGATAAGAGTTT+AGG | - | tig0022505:98420-98439 | Msa1401290:CDS | 25.0% |
| ! | CATTAATGATGAAGATGATA+AGG | - | tig0022505:98461-98480 | Msa1401290:CDS | 25.0% |
| ! | AGAAGACTAATAGTTGTTTA+AGG | - | tig0022505:98559-98578 | Msa1401290:CDS | 25.0% |
| ! | GAAGACTAATAGTTGTTTAA+GGG | - | tig0022505:98560-98579 | Msa1401290:CDS | 25.0% |
| ! | GACATTGATTGTGTTAATGA+AGG | + | tig0022505:96914-96933 | None:intergenic | 30.0% |
| GAACAACAAAACATTGTTGT+AGG | - | tig0022505:97078-97097 | Msa1401290:CDS | 30.0% | |
| AATAGGAGGAATGTTCTAAT+TGG | - | tig0022505:97102-97121 | Msa1401290:CDS | 30.0% | |
| ! | ATGATTTTTGTGGAATTTGG+TGG | + | tig0022505:97261-97280 | None:intergenic | 30.0% |
| TTCATCAAATCAACCCTTAA+GGG | - | tig0022505:97296-97315 | Msa1401290:CDS | 30.0% | |
| AGTTATGAACTTGAAGATCA+AGG | + | tig0022505:97488-97507 | None:intergenic | 30.0% | |
| ! | ATCTTCAAGTTCATAACTCT+TGG | - | tig0022505:97490-97509 | Msa1401290:CDS | 30.0% |
| ! | CTCTTTTTCCTTTTCATAGA+TGG | - | tig0022505:97513-97532 | Msa1401290:CDS | 30.0% |
| !! | TAAAGGTACCATCTATGAAA+AGG | + | tig0022505:97524-97543 | None:intergenic | 30.0% |
| AAGTTTAAGTCTATGAGTGT+TGG | + | tig0022505:97704-97723 | None:intergenic | 30.0% | |
| ATACATTGTAGTAAGGTTTG+AGG | + | tig0022505:97768-97787 | None:intergenic | 30.0% | |
| TATAGACAAATGGTCTCAAA+CGG | - | tig0022505:97785-97804 | Msa1401290:CDS | 30.0% | |
| ! | AAAACTTCAAGTCTTTTCCT+CGG | - | tig0022505:97809-97828 | Msa1401290:CDS | 30.0% |
| ! | CAACCTAACTTTGAAAACAT+GGG | - | tig0022505:97929-97948 | Msa1401290:CDS | 30.0% |
| GAATGGTGAGAGAAAAAAAT+AGG | + | tig0022505:97980-97999 | None:intergenic | 30.0% | |
| CTCACCATTCAAATATTGAT+AGG | - | tig0022505:97990-98009 | Msa1401290:CDS | 30.0% | |
| !! | TTGATAGGTTTTGGTCTATA+TGG | - | tig0022505:98005-98024 | Msa1401290:CDS | 30.0% |
| TAAGAATCTTGTGAAGGTTA+AGG | - | tig0022505:98105-98124 | Msa1401290:intron | 30.0% | |
| TTAGGTTTAGCATTTAACCA+TGG | + | tig0022505:98187-98206 | None:intergenic | 30.0% | |
| !!! | AGTTGCACAAGGAAATTTTT+TGG | - | tig0022505:98240-98259 | Msa1401290:CDS | 30.0% |
| ACAACATTATCCAAAACCAA+TGG | + | tig0022505:98318-98337 | None:intergenic | 30.0% | |
| TTGTTAGTACAATTGTGAAG+AGG | - | tig0022505:98334-98353 | Msa1401290:CDS | 30.0% | |
| !! | AAGAGGTTTTAGTGATTGAA+GGG | - | tig0022505:98397-98416 | Msa1401290:CDS | 30.0% |
| GGTGATTAAGCCAATTAATA+CGG | - | tig0022505:98482-98501 | Msa1401290:CDS | 30.0% | |
| ! | CTTCTTCTTTTTGTGATCAT+GGG | + | tig0022505:98544-98563 | None:intergenic | 30.0% |
| ! | TCTTCTTCTTTTTGTGATCA+TGG | + | tig0022505:98545-98564 | None:intergenic | 30.0% |
| ACTAATAGTTGTTTAAGGGT+TGG | - | tig0022505:98564-98583 | Msa1401290:CDS | 30.0% | |
| TTGTTTAAGGGTTGGATTAA+CGG | - | tig0022505:98572-98591 | Msa1401290:CDS | 30.0% | |
| ! | GACATTGATTGTGTTAATGA+AGG | + | tig0022505:96914-96933 | None:intergenic | 30.0% |
| GAACAACAAAACATTGTTGT+AGG | - | tig0022505:97078-97097 | Msa1401290:CDS | 30.0% | |
| AATAGGAGGAATGTTCTAAT+TGG | - | tig0022505:97102-97121 | Msa1401290:CDS | 30.0% | |
| ! | ATGATTTTTGTGGAATTTGG+TGG | + | tig0022505:97261-97280 | None:intergenic | 30.0% |
| TTCATCAAATCAACCCTTAA+GGG | - | tig0022505:97296-97315 | Msa1401290:CDS | 30.0% | |
| AGTTATGAACTTGAAGATCA+AGG | + | tig0022505:97488-97507 | None:intergenic | 30.0% | |
| ! | ATCTTCAAGTTCATAACTCT+TGG | - | tig0022505:97490-97509 | Msa1401290:CDS | 30.0% |
| ! | CTCTTTTTCCTTTTCATAGA+TGG | - | tig0022505:97513-97532 | Msa1401290:CDS | 30.0% |
| !! | TAAAGGTACCATCTATGAAA+AGG | + | tig0022505:97524-97543 | None:intergenic | 30.0% |
| AAGTTTAAGTCTATGAGTGT+TGG | + | tig0022505:97704-97723 | None:intergenic | 30.0% | |
| ATACATTGTAGTAAGGTTTG+AGG | + | tig0022505:97768-97787 | None:intergenic | 30.0% | |
| TATAGACAAATGGTCTCAAA+CGG | - | tig0022505:97785-97804 | Msa1401290:CDS | 30.0% | |
| ! | AAAACTTCAAGTCTTTTCCT+CGG | - | tig0022505:97809-97828 | Msa1401290:CDS | 30.0% |
| ! | CAACCTAACTTTGAAAACAT+GGG | - | tig0022505:97929-97948 | Msa1401290:CDS | 30.0% |
| GAATGGTGAGAGAAAAAAAT+AGG | + | tig0022505:97980-97999 | None:intergenic | 30.0% | |
| CTCACCATTCAAATATTGAT+AGG | - | tig0022505:97990-98009 | Msa1401290:CDS | 30.0% | |
| !! | TTGATAGGTTTTGGTCTATA+TGG | - | tig0022505:98005-98024 | Msa1401290:CDS | 30.0% |
| TAAGAATCTTGTGAAGGTTA+AGG | - | tig0022505:98105-98124 | Msa1401290:intron | 30.0% | |
| TTAGGTTTAGCATTTAACCA+TGG | + | tig0022505:98187-98206 | None:intergenic | 30.0% | |
| !!! | AGTTGCACAAGGAAATTTTT+TGG | - | tig0022505:98240-98259 | Msa1401290:CDS | 30.0% |
| ACAACATTATCCAAAACCAA+TGG | + | tig0022505:98318-98337 | None:intergenic | 30.0% | |
| TTGTTAGTACAATTGTGAAG+AGG | - | tig0022505:98334-98353 | Msa1401290:CDS | 30.0% | |
| !! | AAGAGGTTTTAGTGATTGAA+GGG | - | tig0022505:98397-98416 | Msa1401290:CDS | 30.0% |
| GGTGATTAAGCCAATTAATA+CGG | - | tig0022505:98482-98501 | Msa1401290:CDS | 30.0% | |
| ! | CTTCTTCTTTTTGTGATCAT+GGG | + | tig0022505:98544-98563 | None:intergenic | 30.0% |
| ! | TCTTCTTCTTTTTGTGATCA+TGG | + | tig0022505:98545-98564 | None:intergenic | 30.0% |
| ACTAATAGTTGTTTAAGGGT+TGG | - | tig0022505:98564-98583 | Msa1401290:CDS | 30.0% | |
| TTGTTTAAGGGTTGGATTAA+CGG | - | tig0022505:98572-98591 | Msa1401290:CDS | 30.0% | |
| ATTGTGTTAATGAAGGCAAG+GGG | + | tig0022505:96907-96926 | None:intergenic | 35.0% | |
| GATTGTGTTAATGAAGGCAA+GGG | + | tig0022505:96908-96927 | None:intergenic | 35.0% | |
| TGATTGTGTTAATGAAGGCA+AGG | + | tig0022505:96909-96928 | None:intergenic | 35.0% | |
| TACCACTGAATGTGATTACT+TGG | + | tig0022505:97023-97042 | None:intergenic | 35.0% | |
| GTTGTTCTTGCTCTTCTTTA+GGG | + | tig0022505:97065-97084 | None:intergenic | 35.0% | |
| TGTTGTTCTTGCTCTTCTTT+AGG | + | tig0022505:97066-97085 | None:intergenic | 35.0% | |
| ACATTGTTGTAGGAAATAGG+AGG | - | tig0022505:97088-97107 | Msa1401290:CDS | 35.0% | |
| !! | CTTAAGGGTTGATTTGATGA+AGG | + | tig0022505:97297-97316 | None:intergenic | 35.0% |
| CTTCATCAAATCAACCCTTA+AGG | - | tig0022505:97295-97314 | Msa1401290:CDS | 35.0% | |
| TAAGGCTTTCATGAGTTCAA+GGG | + | tig0022505:97376-97395 | None:intergenic | 35.0% | |
| ATCCATTGTGCTTATTGTGA+TGG | - | tig0022505:97435-97454 | Msa1401290:CDS | 35.0% | |
| GAACTTGAAGATCAAGGTTA+GGG | + | tig0022505:97482-97501 | None:intergenic | 35.0% | |
| TGAACTTGAAGATCAAGGTT+AGG | + | tig0022505:97483-97502 | None:intergenic | 35.0% | |
| !! | TTTAAGTCTATGAGTGTTGG+AGG | + | tig0022505:97701-97720 | None:intergenic | 35.0% |
| !! | GATGTTGATGATGATGCAAA+TGG | - | tig0022505:97734-97753 | Msa1401290:CDS | 35.0% |
| ! | GCAACCTAACTTTGAAAACA+TGG | - | tig0022505:97928-97947 | Msa1401290:CDS | 35.0% |
| ! | ACTCCCATGTTTTCAAAGTT+AGG | + | tig0022505:97935-97954 | None:intergenic | 35.0% |
| TGGTCTATATGGAAAACACT+TGG | - | tig0022505:98016-98035 | Msa1401290:CDS | 35.0% | |
| TCTATATGGAAAACACTTGG+TGG | - | tig0022505:98019-98038 | Msa1401290:intron | 35.0% | |
| CTATATGGAAAACACTTGGT+GGG | - | tig0022505:98020-98039 | Msa1401290:intron | 35.0% | |
| ACCAAGATGTTGATATTCCA+TGG | - | tig0022505:98167-98186 | Msa1401290:CDS | 35.0% | |
| ACCATGGAATATCAACATCT+TGG | + | tig0022505:98171-98190 | None:intergenic | 35.0% | |
| AAAAATGTGGAAGTTGCACA+AGG | - | tig0022505:98229-98248 | Msa1401290:CDS | 35.0% | |
| TTCTTGCTCCTTGATTTCTT+TGG | + | tig0022505:98360-98379 | None:intergenic | 35.0% | |
| AAAGAAATCAAGGAGCAAGA+AGG | - | tig0022505:98359-98378 | Msa1401290:CDS | 35.0% | |
| !! | GAAGAGGTTTTAGTGATTGA+AGG | - | tig0022505:98396-98415 | Msa1401290:CDS | 35.0% |
| !! | ACGGATTTGTTGGAAGATTT+AGG | - | tig0022505:98591-98610 | Msa1401290:CDS | 35.0% |
| TGATAGCATTGTGGTTACTT+TGG | - | tig0022505:98626-98645 | Msa1401290:CDS | 35.0% | |
| ! | TTACTTTGGTTCCAAGGTAT+GGG | - | tig0022505:98640-98659 | Msa1401290:CDS | 35.0% |
| ATTGTGTTAATGAAGGCAAG+GGG | + | tig0022505:96907-96926 | None:intergenic | 35.0% | |
| GATTGTGTTAATGAAGGCAA+GGG | + | tig0022505:96908-96927 | None:intergenic | 35.0% | |
| TGATTGTGTTAATGAAGGCA+AGG | + | tig0022505:96909-96928 | None:intergenic | 35.0% | |
| TACCACTGAATGTGATTACT+TGG | + | tig0022505:97023-97042 | None:intergenic | 35.0% | |
| GTTGTTCTTGCTCTTCTTTA+GGG | + | tig0022505:97065-97084 | None:intergenic | 35.0% | |
| TGTTGTTCTTGCTCTTCTTT+AGG | + | tig0022505:97066-97085 | None:intergenic | 35.0% | |
| ACATTGTTGTAGGAAATAGG+AGG | - | tig0022505:97088-97107 | Msa1401290:CDS | 35.0% | |
| !! | CTTAAGGGTTGATTTGATGA+AGG | + | tig0022505:97297-97316 | None:intergenic | 35.0% |
| CTTCATCAAATCAACCCTTA+AGG | - | tig0022505:97295-97314 | Msa1401290:CDS | 35.0% | |
| TAAGGCTTTCATGAGTTCAA+GGG | + | tig0022505:97376-97395 | None:intergenic | 35.0% | |
| ATCCATTGTGCTTATTGTGA+TGG | - | tig0022505:97435-97454 | Msa1401290:CDS | 35.0% | |
| GAACTTGAAGATCAAGGTTA+GGG | + | tig0022505:97482-97501 | None:intergenic | 35.0% | |
| TGAACTTGAAGATCAAGGTT+AGG | + | tig0022505:97483-97502 | None:intergenic | 35.0% | |
| !! | TTTAAGTCTATGAGTGTTGG+AGG | + | tig0022505:97701-97720 | None:intergenic | 35.0% |
| !! | GATGTTGATGATGATGCAAA+TGG | - | tig0022505:97734-97753 | Msa1401290:CDS | 35.0% |
| ! | GCAACCTAACTTTGAAAACA+TGG | - | tig0022505:97928-97947 | Msa1401290:CDS | 35.0% |
| ! | ACTCCCATGTTTTCAAAGTT+AGG | + | tig0022505:97935-97954 | None:intergenic | 35.0% |
| TGGTCTATATGGAAAACACT+TGG | - | tig0022505:98016-98035 | Msa1401290:CDS | 35.0% | |
| TCTATATGGAAAACACTTGG+TGG | - | tig0022505:98019-98038 | Msa1401290:intron | 35.0% | |
| CTATATGGAAAACACTTGGT+GGG | - | tig0022505:98020-98039 | Msa1401290:intron | 35.0% | |
| ACCAAGATGTTGATATTCCA+TGG | - | tig0022505:98167-98186 | Msa1401290:CDS | 35.0% | |
| ACCATGGAATATCAACATCT+TGG | + | tig0022505:98171-98190 | None:intergenic | 35.0% | |
| AAAAATGTGGAAGTTGCACA+AGG | - | tig0022505:98229-98248 | Msa1401290:CDS | 35.0% | |
| TTCTTGCTCCTTGATTTCTT+TGG | + | tig0022505:98360-98379 | None:intergenic | 35.0% | |
| AAAGAAATCAAGGAGCAAGA+AGG | - | tig0022505:98359-98378 | Msa1401290:CDS | 35.0% | |
| !! | GAAGAGGTTTTAGTGATTGA+AGG | - | tig0022505:98396-98415 | Msa1401290:CDS | 35.0% |
| !! | ACGGATTTGTTGGAAGATTT+AGG | - | tig0022505:98591-98610 | Msa1401290:CDS | 35.0% |
| TGATAGCATTGTGGTTACTT+TGG | - | tig0022505:98626-98645 | Msa1401290:CDS | 35.0% | |
| ! | TTACTTTGGTTCCAAGGTAT+GGG | - | tig0022505:98640-98659 | Msa1401290:CDS | 35.0% |
| AGAAGGGGAAATCTTTGAGT+TGG | + | tig0022505:96941-96960 | None:intergenic | 40.0% | |
| TGAAAATGGATGCGAAGAAG+GGG | + | tig0022505:96956-96975 | None:intergenic | 40.0% | |
| GTGAAAATGGATGCGAAGAA+GGG | + | tig0022505:96957-96976 | None:intergenic | 40.0% | |
| TGTGAAAATGGATGCGAAGA+AGG | + | tig0022505:96958-96977 | None:intergenic | 40.0% | |
| AATGTGATTACTTGGCGTCT+TGG | + | tig0022505:97015-97034 | None:intergenic | 40.0% | |
| !!! | GCTCTTCTTTAGGGTTGTTT+TGG | + | tig0022505:97056-97075 | None:intergenic | 40.0% |
| ! | AGGAATGTTCTAATTGGCCT+TGG | - | tig0022505:97108-97127 | Msa1401290:CDS | 40.0% |
| !! | AATGTTCTAATTGGCCTTGG+AGG | - | tig0022505:97111-97130 | Msa1401290:CDS | 40.0% |
| !! | TTGTTTGGTGTTGCACCTAA+GGG | + | tig0022505:97225-97244 | None:intergenic | 40.0% |
| !! | ATTGTTTGGTGTTGCACCTA+AGG | + | tig0022505:97226-97245 | None:intergenic | 40.0% |
| GTAAGGCTTTCATGAGTTCA+AGG | + | tig0022505:97377-97396 | None:intergenic | 40.0% | |
| TACAAAACTACGTGGATCAC+TGG | + | tig0022505:97403-97422 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTACAAAACTACG+TGG | + | tig0022505:97411-97430 | None:intergenic | 40.0% |
| CACCATCACAATAAGCACAA+TGG | + | tig0022505:97440-97459 | None:intergenic | 40.0% | |
| GATGGTGCATATTCTCAAGT+TGG | - | tig0022505:97453-97472 | Msa1401290:CDS | 40.0% | |
| CAAAATGGCAAAGCAAAGGT+TGG | + | tig0022505:97584-97603 | None:intergenic | 40.0% | |
| !! | CAACCTTTGCTTTGCCATTT+TGG | - | tig0022505:97582-97601 | Msa1401290:CDS | 40.0% |
| GTTCCAAAATGGCAAAGCAA+AGG | + | tig0022505:97588-97607 | None:intergenic | 40.0% | |
| GTAAAGAGGTGATGTACTGT+CGG | + | tig0022505:97651-97670 | None:intergenic | 40.0% | |
| TCCATAGAGAATGTTCCACA+TGG | - | tig0022505:97875-97894 | Msa1401290:CDS | 40.0% | |
| TCCATGTGGAACATTCTCTA+TGG | + | tig0022505:97879-97898 | None:intergenic | 40.0% | |
| GTGCAAGTGAGATTAACTCA+AGG | - | tig0022505:98277-98296 | Msa1401290:CDS | 40.0% | |
| GAGTTATGTTACGTGTCCAT+TGG | - | tig0022505:98299-98318 | Msa1401290:CDS | 40.0% | |
| !!! | TGTTACGTGTCCATTGGTTT+TGG | - | tig0022505:98305-98324 | Msa1401290:CDS | 40.0% |
| TGAAGAGGCCAAAGAAATCA+AGG | - | tig0022505:98349-98368 | Msa1401290:CDS | 40.0% | |
| CAAGAAGGAGAAAGAAGAAG+AGG | - | tig0022505:98374-98393 | Msa1401290:CDS | 40.0% | |
| CCAGCAAACTCCGTATTAAT+TGG | + | tig0022505:98495-98514 | None:intergenic | 40.0% | |
| CCAATTAATACGGAGTTTGC+TGG | - | tig0022505:98492-98511 | Msa1401290:CDS | 40.0% | |
| TTGTGATCATGGGAAGAATG+AGG | + | tig0022505:98534-98553 | None:intergenic | 40.0% | |
| !! | GGTTGGATTAACGGATTTGT+TGG | - | tig0022505:98581-98600 | Msa1401290:CDS | 40.0% |
| TGAGGATGATGATAGCATTG+TGG | - | tig0022505:98617-98636 | Msa1401290:CDS | 40.0% | |
| ! | TTGTGGTTACTTTGGTTCCA+AGG | - | tig0022505:98634-98653 | Msa1401290:CDS | 40.0% |
| ! | GTTACTTTGGTTCCAAGGTA+TGG | - | tig0022505:98639-98658 | Msa1401290:CDS | 40.0% |
| ACAATTCCTTTCCCATACCT+TGG | + | tig0022505:98654-98673 | None:intergenic | 40.0% | |
| AGAAGGGGAAATCTTTGAGT+TGG | + | tig0022505:96941-96960 | None:intergenic | 40.0% | |
| TGAAAATGGATGCGAAGAAG+GGG | + | tig0022505:96956-96975 | None:intergenic | 40.0% | |
| GTGAAAATGGATGCGAAGAA+GGG | + | tig0022505:96957-96976 | None:intergenic | 40.0% | |
| TGTGAAAATGGATGCGAAGA+AGG | + | tig0022505:96958-96977 | None:intergenic | 40.0% | |
| AATGTGATTACTTGGCGTCT+TGG | + | tig0022505:97015-97034 | None:intergenic | 40.0% | |
| !!! | GCTCTTCTTTAGGGTTGTTT+TGG | + | tig0022505:97056-97075 | None:intergenic | 40.0% |
| ! | AGGAATGTTCTAATTGGCCT+TGG | - | tig0022505:97108-97127 | Msa1401290:CDS | 40.0% |
| !! | AATGTTCTAATTGGCCTTGG+AGG | - | tig0022505:97111-97130 | Msa1401290:CDS | 40.0% |
| !! | TTGTTTGGTGTTGCACCTAA+GGG | + | tig0022505:97225-97244 | None:intergenic | 40.0% |
| !! | ATTGTTTGGTGTTGCACCTA+AGG | + | tig0022505:97226-97245 | None:intergenic | 40.0% |
| GTAAGGCTTTCATGAGTTCA+AGG | + | tig0022505:97377-97396 | None:intergenic | 40.0% | |
| TACAAAACTACGTGGATCAC+TGG | + | tig0022505:97403-97422 | None:intergenic | 40.0% | |
| !! | GCTTGTTGTACAAAACTACG+TGG | + | tig0022505:97411-97430 | None:intergenic | 40.0% |
| CACCATCACAATAAGCACAA+TGG | + | tig0022505:97440-97459 | None:intergenic | 40.0% | |
| GATGGTGCATATTCTCAAGT+TGG | - | tig0022505:97453-97472 | Msa1401290:CDS | 40.0% | |
| CAAAATGGCAAAGCAAAGGT+TGG | + | tig0022505:97584-97603 | None:intergenic | 40.0% | |
| !! | CAACCTTTGCTTTGCCATTT+TGG | - | tig0022505:97582-97601 | Msa1401290:CDS | 40.0% |
| GTTCCAAAATGGCAAAGCAA+AGG | + | tig0022505:97588-97607 | None:intergenic | 40.0% | |
| GTAAAGAGGTGATGTACTGT+CGG | + | tig0022505:97651-97670 | None:intergenic | 40.0% | |
| TCCATAGAGAATGTTCCACA+TGG | - | tig0022505:97875-97894 | Msa1401290:CDS | 40.0% | |
| TCCATGTGGAACATTCTCTA+TGG | + | tig0022505:97879-97898 | None:intergenic | 40.0% | |
| GTGCAAGTGAGATTAACTCA+AGG | - | tig0022505:98277-98296 | Msa1401290:CDS | 40.0% | |
| GAGTTATGTTACGTGTCCAT+TGG | - | tig0022505:98299-98318 | Msa1401290:CDS | 40.0% | |
| !!! | TGTTACGTGTCCATTGGTTT+TGG | - | tig0022505:98305-98324 | Msa1401290:CDS | 40.0% |
| TGAAGAGGCCAAAGAAATCA+AGG | - | tig0022505:98349-98368 | Msa1401290:CDS | 40.0% | |
| CAAGAAGGAGAAAGAAGAAG+AGG | - | tig0022505:98374-98393 | Msa1401290:CDS | 40.0% | |
| CCAGCAAACTCCGTATTAAT+TGG | + | tig0022505:98495-98514 | None:intergenic | 40.0% | |
| CCAATTAATACGGAGTTTGC+TGG | - | tig0022505:98492-98511 | Msa1401290:CDS | 40.0% | |
| TTGTGATCATGGGAAGAATG+AGG | + | tig0022505:98534-98553 | None:intergenic | 40.0% | |
| !! | GGTTGGATTAACGGATTTGT+TGG | - | tig0022505:98581-98600 | Msa1401290:CDS | 40.0% |
| TGAGGATGATGATAGCATTG+TGG | - | tig0022505:98617-98636 | Msa1401290:CDS | 40.0% | |
| ! | TTGTGGTTACTTTGGTTCCA+AGG | - | tig0022505:98634-98653 | Msa1401290:CDS | 40.0% |
| ! | GTTACTTTGGTTCCAAGGTA+TGG | - | tig0022505:98639-98658 | Msa1401290:CDS | 40.0% |
| ACAATTCCTTTCCCATACCT+TGG | + | tig0022505:98654-98673 | None:intergenic | 40.0% | |
| CGCCAAGTAATCACATTCAG+TGG | - | tig0022505:97018-97037 | Msa1401290:CDS | 45.0% | |
| AAGTACCACAAAGTCCTCCA+AGG | + | tig0022505:97128-97147 | None:intergenic | 45.0% | |
| TTGGAGAAGCTAGGGCAAAA+GGG | + | tig0022505:97161-97180 | None:intergenic | 45.0% | |
| ATTGGAGAAGCTAGGGCAAA+AGG | + | tig0022505:97162-97181 | None:intergenic | 45.0% | |
| AGGGGAAATTGGAGAAGCTA+GGG | + | tig0022505:97169-97188 | None:intergenic | 45.0% | |
| GCTGCTTGTCTTACCCTTAA+GGG | + | tig0022505:97312-97331 | None:intergenic | 45.0% | |
| ! | TGCTGCTTGTCTTACCCTTA+AGG | + | tig0022505:97313-97332 | None:intergenic | 45.0% |
| AAACTACGTGGATCACTGGA+TGG | + | tig0022505:97399-97418 | None:intergenic | 45.0% | |
| GGAGAGTCGTAGTTCCAAAA+TGG | + | tig0022505:97599-97618 | None:intergenic | 45.0% | |
| TGGAACTACGACTCTCCTAA+TGG | - | tig0022505:97602-97621 | Msa1401290:CDS | 45.0% | |
| TGATGTACTGTCGGCGTAAA+TGG | + | tig0022505:97642-97661 | None:intergenic | 45.0% | |
| GTTCGGAGTTTGTCGTAAAG+AGG | + | tig0022505:97665-97684 | None:intergenic | 45.0% | |
| !! | TGTTGGAGGTTGATGACTAG+CGG | + | tig0022505:97687-97706 | None:intergenic | 45.0% |
| CATCTATGAACTGGTCCATG+TGG | + | tig0022505:97893-97912 | None:intergenic | 45.0% | |
| CACATGGACCAGTTCATAGA+TGG | - | tig0022505:97891-97910 | Msa1401290:CDS | 45.0% | |
| TCACCACTCCATCTATGAAC+TGG | + | tig0022505:97902-97921 | None:intergenic | 45.0% | |
| GGAGAAAGAAGAAGAGGAAG+AGG | - | tig0022505:98380-98399 | Msa1401290:CDS | 45.0% | |
| GTTGGAAGATTTAGGAGCTG+AGG | - | tig0022505:98599-98618 | Msa1401290:CDS | 45.0% | |
| TTGGTTCCAAGGTATGGGAA+AGG | - | tig0022505:98645-98664 | Msa1401290:CDS | 45.0% | |
| CGCCAAGTAATCACATTCAG+TGG | - | tig0022505:97018-97037 | Msa1401290:CDS | 45.0% | |
| AAGTACCACAAAGTCCTCCA+AGG | + | tig0022505:97128-97147 | None:intergenic | 45.0% | |
| TTGGAGAAGCTAGGGCAAAA+GGG | + | tig0022505:97161-97180 | None:intergenic | 45.0% | |
| ATTGGAGAAGCTAGGGCAAA+AGG | + | tig0022505:97162-97181 | None:intergenic | 45.0% | |
| AGGGGAAATTGGAGAAGCTA+GGG | + | tig0022505:97169-97188 | None:intergenic | 45.0% | |
| GCTGCTTGTCTTACCCTTAA+GGG | + | tig0022505:97312-97331 | None:intergenic | 45.0% | |
| ! | TGCTGCTTGTCTTACCCTTA+AGG | + | tig0022505:97313-97332 | None:intergenic | 45.0% |
| AAACTACGTGGATCACTGGA+TGG | + | tig0022505:97399-97418 | None:intergenic | 45.0% | |
| GGAGAGTCGTAGTTCCAAAA+TGG | + | tig0022505:97599-97618 | None:intergenic | 45.0% | |
| TGGAACTACGACTCTCCTAA+TGG | - | tig0022505:97602-97621 | Msa1401290:CDS | 45.0% | |
| TGATGTACTGTCGGCGTAAA+TGG | + | tig0022505:97642-97661 | None:intergenic | 45.0% | |
| GTTCGGAGTTTGTCGTAAAG+AGG | + | tig0022505:97665-97684 | None:intergenic | 45.0% | |
| !! | TGTTGGAGGTTGATGACTAG+CGG | + | tig0022505:97687-97706 | None:intergenic | 45.0% |
| CATCTATGAACTGGTCCATG+TGG | + | tig0022505:97893-97912 | None:intergenic | 45.0% | |
| CACATGGACCAGTTCATAGA+TGG | - | tig0022505:97891-97910 | Msa1401290:CDS | 45.0% | |
| TCACCACTCCATCTATGAAC+TGG | + | tig0022505:97902-97921 | None:intergenic | 45.0% | |
| GGAGAAAGAAGAAGAGGAAG+AGG | - | tig0022505:98380-98399 | Msa1401290:CDS | 45.0% | |
| GTTGGAAGATTTAGGAGCTG+AGG | - | tig0022505:98599-98618 | Msa1401290:CDS | 45.0% | |
| TTGGTTCCAAGGTATGGGAA+AGG | - | tig0022505:98645-98664 | Msa1401290:CDS | 45.0% | |
| !! | ATTGGCCTTGGAGGACTTTG+TGG | - | tig0022505:97120-97139 | Msa1401290:CDS | 50.0% |
| AGCTAGGGCAAAAGGGTTAG+TGG | + | tig0022505:97154-97173 | None:intergenic | 50.0% | |
| GAGGGGAAATTGGAGAAGCT+AGG | + | tig0022505:97170-97189 | None:intergenic | 50.0% | |
| TGGACCACATGTGGAAAGGT+CGG | + | tig0022505:97193-97212 | None:intergenic | 50.0% | |
| GTTGCACCTAAGGGTAGATC+CGG | + | tig0022505:97216-97235 | None:intergenic | 50.0% | |
| ACGTGGATCACTGGATGGTA+AGG | + | tig0022505:97394-97413 | None:intergenic | 50.0% | |
| GAGGGAAGTTGCATGCCATT+AGG | + | tig0022505:97620-97639 | None:intergenic | 50.0% | |
| GTACTGTCGGCGTAAATGGA+GGG | + | tig0022505:97638-97657 | None:intergenic | 50.0% | |
| TGTACTGTCGGCGTAAATGG+AGG | + | tig0022505:97639-97658 | None:intergenic | 50.0% | |
| !! | GAGGTTGATGACTAGCGGTT+CGG | + | tig0022505:97682-97701 | None:intergenic | 50.0% |
| TATGGATCCAGCACCAGGAT+CGG | + | tig0022505:97861-97880 | None:intergenic | 50.0% | |
| TTCTCTATGGATCCAGCACC+AGG | + | tig0022505:97866-97885 | None:intergenic | 50.0% | |
| GGACCAGTTCATAGATGGAG+TGG | - | tig0022505:97896-97915 | Msa1401290:CDS | 50.0% | |
| !! | ATTGGCCTTGGAGGACTTTG+TGG | - | tig0022505:97120-97139 | Msa1401290:CDS | 50.0% |
| AGCTAGGGCAAAAGGGTTAG+TGG | + | tig0022505:97154-97173 | None:intergenic | 50.0% | |
| GAGGGGAAATTGGAGAAGCT+AGG | + | tig0022505:97170-97189 | None:intergenic | 50.0% | |
| TGGACCACATGTGGAAAGGT+CGG | + | tig0022505:97193-97212 | None:intergenic | 50.0% | |
| GTTGCACCTAAGGGTAGATC+CGG | + | tig0022505:97216-97235 | None:intergenic | 50.0% | |
| ACGTGGATCACTGGATGGTA+AGG | + | tig0022505:97394-97413 | None:intergenic | 50.0% | |
| GAGGGAAGTTGCATGCCATT+AGG | + | tig0022505:97620-97639 | None:intergenic | 50.0% | |
| GTACTGTCGGCGTAAATGGA+GGG | + | tig0022505:97638-97657 | None:intergenic | 50.0% | |
| TGTACTGTCGGCGTAAATGG+AGG | + | tig0022505:97639-97658 | None:intergenic | 50.0% | |
| !! | GAGGTTGATGACTAGCGGTT+CGG | + | tig0022505:97682-97701 | None:intergenic | 50.0% |
| TATGGATCCAGCACCAGGAT+CGG | + | tig0022505:97861-97880 | None:intergenic | 50.0% | |
| TTCTCTATGGATCCAGCACC+AGG | + | tig0022505:97866-97885 | None:intergenic | 50.0% | |
| GGACCAGTTCATAGATGGAG+TGG | - | tig0022505:97896-97915 | Msa1401290:CDS | 50.0% | |
| GAAAGGTCGGGAGGGGAAAT+TGG | + | tig0022505:97180-97199 | None:intergenic | 55.0% | |
| ACATGTGGAAAGGTCGGGAG+GGG | + | tig0022505:97187-97206 | None:intergenic | 55.0% | |
| CACATGTGGAAAGGTCGGGA+GGG | + | tig0022505:97188-97207 | None:intergenic | 55.0% | |
| GGACCACATGTGGAAAGGTC+GGG | + | tig0022505:97192-97211 | None:intergenic | 55.0% | |
| CCTTTCCACATGTGGTCCAC+CGG | - | tig0022505:97194-97213 | Msa1401290:CDS | 55.0% | |
| TAGATCCGGTGGACCACATG+TGG | + | tig0022505:97202-97221 | None:intergenic | 55.0% | |
| CTCGGAAGCTCTTATCGTGC+CGG | - | tig0022505:97827-97846 | Msa1401290:CDS | 55.0% | |
| ACCAGGATCGGGTTCATCAC+CGG | + | tig0022505:97849-97868 | None:intergenic | 55.0% | |
| ATGGATCCAGCACCAGGATC+GGG | + | tig0022505:97860-97879 | None:intergenic | 55.0% | |
| GAAAGGTCGGGAGGGGAAAT+TGG | + | tig0022505:97180-97199 | None:intergenic | 55.0% | |
| ACATGTGGAAAGGTCGGGAG+GGG | + | tig0022505:97187-97206 | None:intergenic | 55.0% | |
| CACATGTGGAAAGGTCGGGA+GGG | + | tig0022505:97188-97207 | None:intergenic | 55.0% | |
| GGACCACATGTGGAAAGGTC+GGG | + | tig0022505:97192-97211 | None:intergenic | 55.0% | |
| CCTTTCCACATGTGGTCCAC+CGG | - | tig0022505:97194-97213 | Msa1401290:CDS | 55.0% | |
| TAGATCCGGTGGACCACATG+TGG | + | tig0022505:97202-97221 | None:intergenic | 55.0% | |
| CTCGGAAGCTCTTATCGTGC+CGG | - | tig0022505:97827-97846 | Msa1401290:CDS | 55.0% | |
| ACCAGGATCGGGTTCATCAC+CGG | + | tig0022505:97849-97868 | None:intergenic | 55.0% | |
| ATGGATCCAGCACCAGGATC+GGG | + | tig0022505:97860-97879 | None:intergenic | 55.0% | |
| CCACATGTGGAAAGGTCGGG+AGG | + | tig0022505:97189-97208 | None:intergenic | 60.0% | |
| CCTCCCGACCTTTCCACATG+TGG | - | tig0022505:97186-97205 | Msa1401290:CDS | 60.0% | |
| CCGGTGGACCACATGTGGAA+AGG | + | tig0022505:97197-97216 | None:intergenic | 60.0% | |
| GGTCCACCGGATCTACCCTT+AGG | - | tig0022505:97207-97226 | Msa1401290:CDS | 60.0% | |
| GCACCTAAGGGTAGATCCGG+TGG | + | tig0022505:97213-97232 | None:intergenic | 60.0% | |
| CGGCACGATAAGAGCTTCCG+AGG | + | tig0022505:97829-97848 | None:intergenic | 60.0% | |
| GATGAACCCGATCCTGGTGC+TGG | - | tig0022505:97851-97870 | Msa1401290:CDS | 60.0% | |
| CCACATGTGGAAAGGTCGGG+AGG | + | tig0022505:97189-97208 | None:intergenic | 60.0% | |
| CCTCCCGACCTTTCCACATG+TGG | - | tig0022505:97186-97205 | Msa1401290:CDS | 60.0% | |
| CCGGTGGACCACATGTGGAA+AGG | + | tig0022505:97197-97216 | None:intergenic | 60.0% | |
| GGTCCACCGGATCTACCCTT+AGG | - | tig0022505:97207-97226 | Msa1401290:CDS | 60.0% | |
| GCACCTAAGGGTAGATCCGG+TGG | + | tig0022505:97213-97232 | None:intergenic | 60.0% | |
| CGGCACGATAAGAGCTTCCG+AGG | + | tig0022505:97829-97848 | None:intergenic | 60.0% | |
| GATGAACCCGATCCTGGTGC+TGG | - | tig0022505:97851-97870 | Msa1401290:CDS | 60.0% | |
| GCCGGTGATGAACCCGATCC+TGG | - | tig0022505:97845-97864 | Msa1401290:CDS | 65.0% | |
| GCCGGTGATGAACCCGATCC+TGG | - | tig0022505:97845-97864 | Msa1401290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022505 | gene | 96889 | 98710 | 96889 | ID=Msa1401290;Name=Msa1401290 |
| tig0022505 | mRNA | 96889 | 98710 | 96889 | ID=Msa1401290-mRNA-1;Parent=Msa1401290;Name=Msa1401290-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|550 |
| tig0022505 | exon | 98143 | 98710 | 98143 | ID=Msa1401290-mRNA-1:exon:18243;Parent=Msa1401290-mRNA-1 |
| tig0022505 | exon | 97388 | 98035 | 97388 | ID=Msa1401290-mRNA-1:exon:18242;Parent=Msa1401290-mRNA-1 |
| tig0022505 | exon | 96889 | 97325 | 96889 | ID=Msa1401290-mRNA-1:exon:18241;Parent=Msa1401290-mRNA-1 |
| tig0022505 | CDS | 98143 | 98710 | 98143 | ID=Msa1401290-mRNA-1:cds;Parent=Msa1401290-mRNA-1 |
| tig0022505 | CDS | 97388 | 98035 | 97388 | ID=Msa1401290-mRNA-1:cds;Parent=Msa1401290-mRNA-1 |
| tig0022505 | CDS | 96889 | 97325 | 96889 | ID=Msa1401290-mRNA-1:cds;Parent=Msa1401290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
