Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921340 | XP_003619776.1 | 97.452 | 157 | 4 | 0 | 1 | 157 | 1 | 157 | 4.51e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921340 | sp|Q6L4D2|PM19L_ORYSJ | 43.624 | 149 | 70 | 3 | 2 | 149 | 6 | 141 | 2.00e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009530 | Msa0921340 | -0.816517 | 5.308193e-52 | -8.615850e-47 |
| Msa0011060 | Msa0921340 | -0.803351 | 3.633903e-49 | -8.615850e-47 |
| Msa0011100 | Msa0921340 | -0.826071 | 3.317724e-54 | -8.615850e-47 |
| Msa0016380 | Msa0921340 | -0.810182 | 1.309064e-50 | -8.615850e-47 |
| Msa0027030 | Msa0921340 | -0.800510 | 1.393257e-48 | -8.615850e-47 |
| Msa0030760 | Msa0921340 | -0.850606 | 1.523219e-60 | -8.615850e-47 |
| Msa0036560 | Msa0921340 | -0.843626 | 1.248353e-58 | -8.615850e-47 |
| Msa0042500 | Msa0921340 | -0.808872 | 2.501925e-50 | -8.615850e-47 |
| Msa0045620 | Msa0921340 | 0.800755 | 1.242201e-48 | -8.615850e-47 |
| Msa0050530 | Msa0921340 | 0.822845 | 1.904466e-53 | -8.615850e-47 |
| Msa0072390 | Msa0921340 | -0.810688 | 1.017898e-50 | -8.615850e-47 |
| Msa0078160 | Msa0921340 | -0.836581 | 8.603686e-57 | -8.615850e-47 |
| Msa0078170 | Msa0921340 | -0.827222 | 1.762616e-54 | -8.615850e-47 |
| Msa0079570 | Msa0921340 | -0.812269 | 4.616115e-51 | -8.615850e-47 |
| Msa0081700 | Msa0921340 | -0.802052 | 6.735745e-49 | -8.615850e-47 |
| Msa0089470 | Msa0921340 | -0.811821 | 5.780332e-51 | -8.615850e-47 |
| Msa0094900 | Msa0921340 | -0.830191 | 3.374523e-55 | -8.615850e-47 |
| Msa0099090 | Msa0921340 | -0.828276 | 9.836544e-55 | -8.615850e-47 |
| Msa0100890 | Msa0921340 | 0.803703 | 3.071974e-49 | -8.615850e-47 |
| Msa0603600 | Msa0921340 | -0.804615 | 1.983934e-49 | -8.615850e-47 |
| Msa0605520 | Msa0921340 | 0.818328 | 2.075837e-52 | -8.615850e-47 |
| Msa0612880 | Msa0921340 | -0.838333 | 3.060925e-57 | -8.615850e-47 |
| Msa0619390 | Msa0921340 | -0.810368 | 1.193182e-50 | -8.615850e-47 |
| Msa0619450 | Msa0921340 | -0.802614 | 5.161369e-49 | -8.615850e-47 |
| Msa0619530 | Msa0921340 | -0.800623 | 1.321241e-48 | -8.615850e-47 |
| Msa0623310 | Msa0921340 | 0.803800 | 2.931825e-49 | -8.615850e-47 |
| Msa0625900 | Msa0921340 | -0.828473 | 8.817985e-55 | -8.615850e-47 |
| Msa0646030 | Msa0921340 | -0.803283 | 3.754188e-49 | -8.615850e-47 |
| Msa0654560 | Msa0921340 | -0.814921 | 1.204562e-51 | -8.615850e-47 |
| Msa0659020 | Msa0921340 | -0.806210 | 9.188771e-50 | -8.615850e-47 |
| Msa0659580 | Msa0921340 | -0.803573 | 3.267954e-49 | -8.615850e-47 |
| Msa0662230 | Msa0921340 | -0.823356 | 1.447764e-53 | -8.615850e-47 |
| Msa0663580 | Msa0921340 | -0.803397 | 3.555109e-49 | -8.615850e-47 |
| Msa0663690 | Msa0921340 | -0.827941 | 1.184571e-54 | -8.615850e-47 |
| Msa0667680 | Msa0921340 | -0.813721 | 2.217779e-51 | -8.615850e-47 |
| Msa0673940 | Msa0921340 | 0.820150 | 7.986148e-53 | -8.615850e-47 |
| Msa0674680 | Msa0921340 | -0.813173 | 2.927279e-51 | -8.615850e-47 |
| Msa0677250 | Msa0921340 | -0.803689 | 3.092371e-49 | -8.615850e-47 |
| Msa0681100 | Msa0921340 | -0.800422 | 1.452213e-48 | -8.615850e-47 |
| Msa0681190 | Msa0921340 | -0.802613 | 5.163021e-49 | -8.615850e-47 |
| Msa0685390 | Msa0921340 | -0.804590 | 2.008033e-49 | -8.615850e-47 |
| Msa0696600 | Msa0921340 | -0.801405 | 9.144595e-49 | -8.615850e-47 |
| Msa0704790 | Msa0921340 | -0.805843 | 1.097590e-49 | -8.615850e-47 |
| Msa0706130 | Msa0921340 | -0.800270 | 1.559103e-48 | -8.615850e-47 |
| Msa0706690 | Msa0921340 | 0.842726 | 2.168842e-58 | -8.615850e-47 |
| Msa0714230 | Msa0921340 | -0.822686 | 2.074315e-53 | -8.615850e-47 |
| Msa0730250 | Msa0921340 | -0.831286 | 1.819117e-55 | -8.615850e-47 |
| Msa0733240 | Msa0921340 | -0.812416 | 4.286687e-51 | -8.615850e-47 |
| Msa0738460 | Msa0921340 | -0.801588 | 8.389540e-49 | -8.615850e-47 |
| Msa0742690 | Msa0921340 | -0.801107 | 1.052490e-48 | -8.615850e-47 |
| Msa0758880 | Msa0921340 | -0.803670 | 3.120767e-49 | -8.615850e-47 |
| Msa0761830 | Msa0921340 | 0.813387 | 2.627093e-51 | -8.615850e-47 |
| Msa0768240 | Msa0921340 | -0.806078 | 9.797128e-50 | -8.615850e-47 |
| Msa0770540 | Msa0921340 | -0.812829 | 3.481224e-51 | -8.615850e-47 |
| Msa0772420 | Msa0921340 | 0.820013 | 8.582203e-53 | -8.615850e-47 |
| Msa0801920 | Msa0921340 | -0.805161 | 1.525460e-49 | -8.615850e-47 |
| Msa0817880 | Msa0921340 | -0.808752 | 2.654275e-50 | -8.615850e-47 |
| Msa0828350 | Msa0921340 | 0.832154 | 1.111519e-55 | -8.615850e-47 |
| Msa0831460 | Msa0921340 | -0.813828 | 2.100174e-51 | -8.615850e-47 |
| Msa0838120 | Msa0921340 | -0.804505 | 2.091751e-49 | -8.615850e-47 |
| Msa0123680 | Msa0921340 | -0.801385 | 9.230104e-49 | -8.615850e-47 |
| Msa0127350 | Msa0921340 | -0.802141 | 6.457037e-49 | -8.615850e-47 |
| Msa0130360 | Msa0921340 | 0.804207 | 2.413154e-49 | -8.615850e-47 |
| Msa0132080 | Msa0921340 | -0.812561 | 3.985600e-51 | -8.615850e-47 |
| Msa0136090 | Msa0921340 | 0.804079 | 2.566476e-49 | -8.615850e-47 |
| Msa0138340 | Msa0921340 | -0.808419 | 3.126681e-50 | -8.615850e-47 |
| Msa0139280 | Msa0921340 | -0.836349 | 9.855800e-57 | -8.615850e-47 |
| Msa0147960 | Msa0921340 | -0.808148 | 3.570432e-50 | -8.615850e-47 |
| Msa0164580 | Msa0921340 | -0.806650 | 7.421657e-50 | -8.615850e-47 |
| Msa0169710 | Msa0921340 | 0.802722 | 4.903460e-49 | -8.615850e-47 |
| Msa0172290 | Msa0921340 | -0.811347 | 7.327596e-51 | -8.615850e-47 |
| Msa0178440 | Msa0921340 | -0.801269 | 9.749361e-49 | -8.615850e-47 |
| Msa0186380 | Msa0921340 | -0.818472 | 1.925308e-52 | -8.615850e-47 |
| Msa0194750 | Msa0921340 | -0.823933 | 1.060455e-53 | -8.615850e-47 |
| Msa0197920 | Msa0921340 | 0.805987 | 1.023820e-49 | -8.615850e-47 |
| Msa0208040 | Msa0921340 | -0.810718 | 1.002826e-50 | -8.615850e-47 |
| Msa0208710 | Msa0921340 | -0.805455 | 1.324251e-49 | -8.615850e-47 |
| Msa0209370 | Msa0921340 | -0.819656 | 1.035743e-52 | -8.615850e-47 |
| Msa0209590 | Msa0921340 | -0.821389 | 4.143562e-53 | -8.615850e-47 |
| Msa0210790 | Msa0921340 | 0.800803 | 1.214398e-48 | -8.615850e-47 |
| Msa0211460 | Msa0921340 | 0.824083 | 9.780192e-54 | -8.615850e-47 |
| Msa0219840 | Msa0921340 | 0.823194 | 1.579079e-53 | -8.615850e-47 |
| Msa0223590 | Msa0921340 | 0.806784 | 6.951709e-50 | -8.615850e-47 |
| Msa0225070 | Msa0921340 | -0.822994 | 1.758474e-53 | -8.615850e-47 |
| Msa0227970 | Msa0921340 | -0.854235 | 1.408803e-61 | -8.615850e-47 |
| Msa0236690 | Msa0921340 | -0.824841 | 6.486721e-54 | -8.615850e-47 |
| Msa0367590 | Msa0921340 | -0.814805 | 1.277472e-51 | -8.615850e-47 |
| Msa0368620 | Msa0921340 | 0.805218 | 1.484033e-49 | -8.615850e-47 |
| Msa0370350 | Msa0921340 | -0.809074 | 2.265031e-50 | -8.615850e-47 |
| Msa0372100 | Msa0921340 | 0.843173 | 1.649376e-58 | -8.615850e-47 |
| Msa0375570 | Msa0921340 | -0.813444 | 2.551605e-51 | -8.615850e-47 |
| Msa0382060 | Msa0921340 | -0.806610 | 7.567453e-50 | -8.615850e-47 |
| Msa0385870 | Msa0921340 | -0.817203 | 3.724737e-52 | -8.615850e-47 |
| Msa0387890 | Msa0921340 | 0.819558 | 1.090702e-52 | -8.615850e-47 |
| Msa0389890 | Msa0921340 | -0.814446 | 1.534521e-51 | -8.615850e-47 |
| Msa0416040 | Msa0921340 | 0.802362 | 5.815266e-49 | -8.615850e-47 |
| Msa0417850 | Msa0921340 | -0.805980 | 1.027098e-49 | -8.615850e-47 |
| Msa0421290 | Msa0921340 | 0.811499 | 6.790715e-51 | -8.615850e-47 |
| Msa0424220 | Msa0921340 | -0.813208 | 2.874788e-51 | -8.615850e-47 |
| Msa0427260 | Msa0921340 | -0.810145 | 1.333250e-50 | -8.615850e-47 |
| Msa0431560 | Msa0921340 | -0.803691 | 3.088750e-49 | -8.615850e-47 |
| Msa0450890 | Msa0921340 | -0.808045 | 3.756668e-50 | -8.615850e-47 |
| Msa0456450 | Msa0921340 | -0.805476 | 1.310303e-49 | -8.615850e-47 |
| Msa0467250 | Msa0921340 | 0.826707 | 2.340781e-54 | -8.615850e-47 |
| Msa0471130 | Msa0921340 | -0.827376 | 1.618653e-54 | -8.615850e-47 |
| Msa0475690 | Msa0921340 | -0.817442 | 3.291531e-52 | -8.615850e-47 |
| Msa0476570 | Msa0921340 | -0.800584 | 1.345879e-48 | -8.615850e-47 |
| Msa0476730 | Msa0921340 | -0.800725 | 1.259699e-48 | -8.615850e-47 |
| Msa0480260 | Msa0921340 | 0.802852 | 4.607971e-49 | -8.615850e-47 |
| Msa0260980 | Msa0921340 | 0.802628 | 5.126043e-49 | -8.615850e-47 |
| Msa0264890 | Msa0921340 | 0.821822 | 3.292110e-53 | -8.615850e-47 |
| Msa0266140 | Msa0921340 | -0.804699 | 1.905410e-49 | -8.615850e-47 |
| Msa0267450 | Msa0921340 | -0.802407 | 5.694002e-49 | -8.615850e-47 |
| Msa0267510 | Msa0921340 | -0.800225 | 1.592847e-48 | -8.615850e-47 |
| Msa0269660 | Msa0921340 | -0.816632 | 5.004231e-52 | -8.615850e-47 |
| Msa0270730 | Msa0921340 | -0.803993 | 2.673163e-49 | -8.615850e-47 |
| Msa0277320 | Msa0921340 | 0.806493 | 8.009276e-50 | -8.615850e-47 |
| Msa0278920 | Msa0921340 | 0.804363 | 2.239463e-49 | -8.615850e-47 |
| Msa0297200 | Msa0921340 | 0.806301 | 8.792185e-50 | -8.615850e-47 |
| Msa0304060 | Msa0921340 | -0.812580 | 3.947573e-51 | -8.615850e-47 |
| Msa0304350 | Msa0921340 | -0.821450 | 4.011671e-53 | -8.615850e-47 |
| Msa0305910 | Msa0921340 | -0.824215 | 9.105721e-54 | -8.615850e-47 |
| Msa0336430 | Msa0921340 | 0.802266 | 6.088057e-49 | -8.615850e-47 |
| Msa0336520 | Msa0921340 | 0.821312 | 4.316685e-53 | -8.615850e-47 |
| Msa0340270 | Msa0921340 | 0.808978 | 2.374896e-50 | -8.615850e-47 |
| Msa0340830 | Msa0921340 | -0.827817 | 1.269044e-54 | -8.615850e-47 |
| Msa0340870 | Msa0921340 | -0.817039 | 4.053938e-52 | -8.615850e-47 |
| Msa0483090 | Msa0921340 | -0.807978 | 3.880913e-50 | -8.615850e-47 |
| Msa0512930 | Msa0921340 | -0.805163 | 1.524305e-49 | -8.615850e-47 |
| Msa0513580 | Msa0921340 | -0.829134 | 6.100337e-55 | -8.615850e-47 |
| Msa0523400 | Msa0921340 | -0.817313 | 3.517632e-52 | -8.615850e-47 |
| Msa0527210 | Msa0921340 | -0.806167 | 9.383083e-50 | -8.615850e-47 |
| Msa0527560 | Msa0921340 | 0.814872 | 1.234600e-51 | -8.615850e-47 |
| Msa0537210 | Msa0921340 | 0.803032 | 4.231012e-49 | -8.615850e-47 |
| Msa0538050 | Msa0921340 | -0.835401 | 1.714312e-56 | -8.615850e-47 |
| Msa0566090 | Msa0921340 | -0.807656 | 4.543727e-50 | -8.615850e-47 |
| Msa0566460 | Msa0921340 | 0.804719 | 1.887643e-49 | -8.615850e-47 |
| Msa0566930 | Msa0921340 | 0.814623 | 1.401999e-51 | -8.615850e-47 |
| Msa0568300 | Msa0921340 | -0.804343 | 2.261303e-49 | -8.615850e-47 |
| Msa0568460 | Msa0921340 | -0.823315 | 1.479749e-53 | -8.615850e-47 |
| Msa0575950 | Msa0921340 | 0.817422 | 3.324481e-52 | -8.615850e-47 |
| Msa0576500 | Msa0921340 | -0.811479 | 6.858177e-51 | -8.615850e-47 |
| Msa0577050 | Msa0921340 | -0.806238 | 9.065168e-50 | -8.615850e-47 |
| Msa0585720 | Msa0921340 | -0.818720 | 1.691815e-52 | -8.615850e-47 |
| Msa0587180 | Msa0921340 | 0.806827 | 6.808394e-50 | -8.615850e-47 |
| Msa0598470 | Msa0921340 | -0.831458 | 1.650722e-55 | -8.615850e-47 |
| Msa0847140 | Msa0921340 | 0.822564 | 2.213848e-53 | -8.615850e-47 |
| Msa0848670 | Msa0921340 | -0.810913 | 9.099055e-51 | -8.615850e-47 |
| Msa0861400 | Msa0921340 | -0.820440 | 6.850129e-53 | -8.615850e-47 |
| Msa0861820 | Msa0921340 | 0.804829 | 1.789776e-49 | -8.615850e-47 |
| Msa0871420 | Msa0921340 | 0.807408 | 5.128340e-50 | -8.615850e-47 |
| Msa0876030 | Msa0921340 | -0.812442 | 4.230565e-51 | -8.615850e-47 |
| Msa0907170 | Msa0921340 | 0.815634 | 8.359433e-52 | -8.615850e-47 |
| Msa0917630 | Msa0921340 | -0.813694 | 2.248020e-51 | -8.615850e-47 |
| Msa0921340 | Msa0941150 | -0.823549 | 1.304466e-53 | -8.615850e-47 |
| Msa0921340 | Msa0949550 | -0.801885 | 7.288853e-49 | -8.615850e-47 |
| Msa0921340 | Msa0959850 | 0.944898 | 8.343059e-104 | -8.615850e-47 |
| Msa0921340 | Msa0967900 | -0.825048 | 5.797981e-54 | -8.615850e-47 |
| Msa0921340 | Msa0978980 | 0.804790 | 1.824311e-49 | -8.615850e-47 |
| Msa0921340 | Msa0987670 | 0.811617 | 6.402388e-51 | -8.615850e-47 |
| Msa0921340 | Msa1019040 | -0.800986 | 1.113827e-48 | -8.615850e-47 |
| Msa0921340 | Msa1039150 | -0.814665 | 1.372064e-51 | -8.615850e-47 |
| Msa0921340 | Msa1070630 | -0.801663 | 8.098306e-49 | -8.615850e-47 |
| Msa0921340 | Msa1078590 | -0.809442 | 1.888639e-50 | -8.615850e-47 |
| Msa0921340 | Msa1078600 | -0.807550 | 4.784620e-50 | -8.615850e-47 |
| Msa0921340 | Msa1078760 | -0.811572 | 6.547473e-51 | -8.615850e-47 |
| Msa0921340 | Msa1078770 | -0.808105 | 3.646350e-50 | -8.615850e-47 |
| Msa0921340 | Msa1083660 | -0.810842 | 9.427230e-51 | -8.615850e-47 |
| Msa0921340 | Msa1085560 | 0.801265 | 9.769150e-49 | -8.615850e-47 |
| Msa0921340 | Msa1088260 | 0.813534 | 2.438210e-51 | -8.615850e-47 |
| Msa0921340 | Msa1093190 | -0.840156 | 1.030156e-57 | -8.615850e-47 |
| Msa0921340 | Msa1132880 | -0.800603 | 1.333924e-48 | -8.615850e-47 |
| Msa0921340 | Msa1136770 | -0.817570 | 3.079563e-52 | -8.615850e-47 |
| Msa0921340 | Msa1136970 | -0.824517 | 7.732108e-54 | -8.615850e-47 |
| Msa0921340 | Msa1143860 | -0.808663 | 2.772607e-50 | -8.615850e-47 |
| Msa0921340 | Msa1158450 | -0.801333 | 9.463156e-49 | -8.615850e-47 |
| Msa0921340 | Msa1169600 | -0.806262 | 8.959735e-50 | -8.615850e-47 |
| Msa0921340 | Msa1186260 | 0.807619 | 4.627718e-50 | -8.615850e-47 |
| Msa0921340 | Msa1191960 | -0.820800 | 5.664817e-53 | -8.615850e-47 |
| Msa0921340 | Msa1194480 | -0.849320 | 3.487228e-60 | -8.615850e-47 |
| Msa0921340 | Msa1197820 | 0.810874 | 9.276815e-51 | -8.615850e-47 |
| Msa0921340 | Msa1200360 | 0.808768 | 2.633501e-50 | -8.615850e-47 |
| Msa0921340 | Msa1205270 | -0.807652 | 4.552880e-50 | -8.615850e-47 |
| Msa0921340 | Msa1225140 | -0.807036 | 6.148915e-50 | -8.615850e-47 |
| Msa0921340 | Msa1228600 | -0.815229 | 1.028849e-51 | -8.615850e-47 |
| Msa0921340 | Msa1240240 | -0.814833 | 1.259651e-51 | -8.615850e-47 |
| Msa0921340 | Msa1251500 | 0.820971 | 5.172484e-53 | -8.615850e-47 |
| Msa0921340 | Msa1266120 | -0.801710 | 7.919625e-49 | -8.615850e-47 |
| Msa0921340 | Msa1286860 | -0.805703 | 1.174625e-49 | -8.615850e-47 |
| Msa0921340 | Msa1286950 | -0.801486 | 8.800739e-49 | -8.615850e-47 |
| Msa0921340 | Msa1288970 | -0.814019 | 1.906233e-51 | -8.615850e-47 |
| Msa0921340 | Msa1290090 | -0.849691 | 2.748636e-60 | -8.615850e-47 |
| Msa0921340 | Msa1291070 | -0.814839 | 1.255577e-51 | -8.615850e-47 |
| Msa0921340 | Msa1292140 | 0.819564 | 1.086943e-52 | -8.615850e-47 |
| Msa0921340 | Msa1295210 | -0.810101 | 1.362747e-50 | -8.615850e-47 |
| Msa0921340 | Msa1297220 | -0.808148 | 3.570432e-50 | -8.615850e-47 |
| Msa0921340 | Msa1301610 | -0.812448 | 4.217550e-51 | -8.615850e-47 |
| Msa0921340 | Msa1320660 | -0.812177 | 4.833041e-51 | -8.615850e-47 |
| Msa0921340 | Msa1323260 | -0.823088 | 1.671977e-53 | -8.615850e-47 |
| Msa0921340 | Msa1342360 | -0.805403 | 1.357732e-49 | -8.615850e-47 |
| Msa0921340 | Msa1343450 | -0.815836 | 7.538351e-52 | -8.615850e-47 |
| Msa0921340 | Msa1343460 | 0.834239 | 3.362224e-56 | -8.615850e-47 |
| Msa0921340 | Msa1344930 | 0.804283 | 2.326978e-49 | -8.615850e-47 |
| Msa0921340 | Msa1346340 | -0.800628 | 1.318095e-48 | -8.615850e-47 |
| Msa0921340 | Msa1348860 | -0.804903 | 1.727483e-49 | -8.615850e-47 |
| Msa0921340 | Msa1349490 | -0.812213 | 4.747509e-51 | -8.615850e-47 |
| Msa0921340 | Msa1350580 | -0.827685 | 1.364783e-54 | -8.615850e-47 |
| Msa0921340 | Msa1365130 | -0.827501 | 1.510868e-54 | -8.615850e-47 |
| Msa0921340 | Msa1367900 | -0.822824 | 1.926505e-53 | -8.615850e-47 |
| Msa0921340 | Msa1369180 | -0.804037 | 2.618171e-49 | -8.615850e-47 |
| Msa0921340 | Msa1371270 | 0.830643 | 2.616103e-55 | -8.615850e-47 |
| Msa0921340 | Msa1371540 | -0.811008 | 8.677156e-51 | -8.615850e-47 |
| Msa0921340 | Msa1371800 | 0.803218 | 3.871295e-49 | -8.615850e-47 |
| Msa0921340 | Msa1376010 | -0.807203 | 5.670093e-50 | -8.615850e-47 |
| Msa0921340 | Msa1377140 | 0.807810 | 4.214236e-50 | -8.615850e-47 |
| Msa0921340 | Msa1379270 | -0.828340 | 9.494146e-55 | -8.615850e-47 |
| Msa0921340 | Msa1381300 | -0.819597 | 1.068309e-52 | -8.615850e-47 |
| Msa0921340 | Msa1382100 | -0.817847 | 2.667296e-52 | -8.615850e-47 |
| Msa0921340 | Msa1384410 | -0.803158 | 3.983500e-49 | -8.615850e-47 |
| Msa0921340 | Msa1387100 | -0.847123 | 1.411132e-59 | -8.615850e-47 |
| Msa0921340 | Msa1392570 | -0.808909 | 2.456964e-50 | -8.615850e-47 |
| Msa0921340 | Msa1395700 | -0.800429 | 1.447327e-48 | -8.615850e-47 |
| Msa0921340 | Msa1412810 | -0.801584 | 8.403931e-49 | -8.615850e-47 |
| Msa0921340 | Msa1418840 | -0.809256 | 2.069869e-50 | -8.615850e-47 |
| Msa0921340 | Msa1427600 | -0.812632 | 3.845449e-51 | -8.615850e-47 |
| Msa0921340 | Msa1430250 | 0.816566 | 5.176902e-52 | -8.615850e-47 |
| Msa0921340 | Msa1430460 | -0.802851 | 4.610730e-49 | -8.615850e-47 |
| Msa0921340 | Msa1430630 | -0.812567 | 3.973569e-51 | -8.615850e-47 |
| Msa0921340 | Msa1434700 | 0.805459 | 1.321215e-49 | -8.615850e-47 |
| Msa0921340 | Msa1436660 | -0.806870 | 6.668491e-50 | -8.615850e-47 |
| Msa0921340 | Msa1444660 | 0.940129 | 3.948606e-100 | -8.615850e-47 |
| Msa0921340 | Msa1452800 | -0.804388 | 2.213130e-49 | -8.615850e-47 |
| Msa0921340 | Msa1453030 | 0.806262 | 8.960992e-50 | -8.615850e-47 |
| Msa0921340 | Msa1462210 | -0.804819 | 1.799162e-49 | -8.615850e-47 |
| Msa0921340 | Msa1466530 | 0.808413 | 3.136025e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921340 | MtrunA17_Chr6g0478031 | 97.452 | 157 | 4 | 0 | 1 | 157 | 1 | 157 | 4.15e-110 | 309 |
| Msa0921340 | MtrunA17_Chr2g0303931 | 75.524 | 143 | 35 | 0 | 1 | 143 | 6 | 148 | 7.15e-71 | 210 |
| Msa0921340 | MtrunA17_Chr4g0065951 | 46.617 | 133 | 71 | 0 | 16 | 148 | 21 | 153 | 3.86e-35 | 120 |
| Msa0921340 | MtrunA17_Chr1g0199041 | 42.568 | 148 | 71 | 4 | 2 | 148 | 6 | 140 | 1.08e-26 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0921340 | AT5G46530.1 | 72.000 | 150 | 42 | 0 | 1 | 150 | 6 | 155 | 4.07e-77 | 226 |
| Msa0921340 | AT1G29520.1 | 78.667 | 150 | 32 | 0 | 1 | 150 | 6 | 155 | 5.29e-76 | 224 |
| Msa0921340 | AT5G18970.1 | 45.578 | 147 | 80 | 0 | 2 | 148 | 7 | 153 | 1.33e-37 | 127 |
| Msa0921340 | AT1G04560.1 | 45.270 | 148 | 67 | 4 | 2 | 148 | 7 | 141 | 1.29e-30 | 109 |
Find 29 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCCATTGGGAAGAAAA+TGG | 0.238328 | 6_2:-58596289 | None:intergenic |
| TGCATGTATGTCATTGTTCT+AGG | 0.248721 | 6_2:+58596016 | Msa0921340:CDS |
| CTCTACATAGTTGCAATTCA+TGG | 0.273645 | 6_2:+58597125 | Msa0921340:CDS |
| GGTGCTGCATCGACAATTTC+AGG | 0.318250 | 6_2:+58596360 | Msa0921340:CDS |
| TGCTGCTTCAATTGCTACTT+TGG | 0.334645 | 6_2:+58596425 | Msa0921340:CDS |
| CCAATGGGAAATGCTTCAAC+TGG | 0.374176 | 6_2:+58596300 | Msa0921340:CDS |
| CTTCAATTGCTACTTTGGCT+TGG | 0.384442 | 6_2:+58596430 | Msa0921340:CDS |
| GACTCTTACACTGCTTGCCA+TGG | 0.388463 | 6_2:+58596452 | Msa0921340:CDS |
| GTTACGATTTCTTTGTTAGC+TGG | 0.398205 | 6_2:+58596330 | Msa0921340:CDS |
| TCTTTGTTAGCTGGAGTAGT+TGG | 0.415192 | 6_2:+58596339 | Msa0921340:CDS |
| TTGTTCTAGGCATTGGTGCA+TGG | 0.424644 | 6_2:+58596029 | Msa0921340:CDS |
| CAGTTGAAGCATTTCCCATT+GGG | 0.433142 | 6_2:-58596299 | None:intergenic |
| TGAGCTGGAAGATTTAATTC+CGG | 0.439380 | 6_2:-58596258 | None:intergenic |
| TGTTCTAGGCATTGGTGCAT+GGG | 0.449144 | 6_2:+58596030 | Msa0921340:CDS |
| ACTCTTACACTGCTTGCCAT+GGG | 0.453490 | 6_2:+58596453 | Msa0921340:CDS |
| ACAAAATACATAGTTCGGTT+AGG | 0.457892 | 6_2:+58595949 | None:intergenic |
| TTTCCCATTGGGAAGAAAAT+GGG | 0.461124 | 6_2:-58596288 | None:intergenic |
| GAGTCAAACATATCTGTTCA+TGG | 0.465531 | 6_2:+58596382 | Msa0921340:CDS |
| TCAAATTAGAAATGCACGTC+TGG | 0.465623 | 6_2:+58596979 | Msa0921340:CDS |
| CCAGTTGAAGCATTTCCCAT+TGG | 0.492597 | 6_2:-58596300 | None:intergenic |
| GATAATTATGAAAGCCTCCA+TGG | 0.495765 | 6_2:-58597084 | None:intergenic |
| TATGTCATTGTTCTAGGCAT+TGG | 0.506725 | 6_2:+58596022 | Msa0921340:CDS |
| GTCCATAGCAACACTTCTCT+TGG | 0.510981 | 6_2:+58595982 | Msa0921340:CDS |
| CACCAAGAGAAGTGTTGCTA+TGG | 0.525202 | 6_2:-58595984 | None:intergenic |
| TTAACTTCTGCAGATTTGCA+TGG | 0.530112 | 6_2:+58596942 | Msa0921340:intron |
| ATGAATAGAGCAATAGATCA+TGG | 0.550315 | 6_2:+58596055 | Msa0921340:CDS |
| AGAGAAGCTGTGTAACTGAA+AGG | 0.596446 | 6_2:-58597106 | None:intergenic |
| GTAGCAATTGAAGCAGCAGA+TGG | 0.611432 | 6_2:-58596420 | None:intergenic |
| CTCTTACACTGCTTGCCATG+GGG | 0.615745 | 6_2:+58596454 | Msa0921340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTACTATTATTTAG+AGG | - | chr6_2:58596520-58596539 | None:intergenic | 10.0% |
| !! | AATAAAACTATAAAAATCAA+AGG | + | chr6_2:58596653-58596672 | Msa0921340:intron | 10.0% |
| !! | CATATAATATATATATTTGA+CGG | + | chr6_2:58597156-58597175 | Msa0921340:CDS | 10.0% |
| !!! | TTTTTATTACTATTATTTAG+AGG | - | chr6_2:58596520-58596539 | None:intergenic | 10.0% |
| !! | AATAAAACTATAAAAATCAA+AGG | + | chr6_2:58596653-58596672 | Msa0921340:intron | 10.0% |
| !!! | GTTTTAATTGAAAACAAATT+TGG | - | chr6_2:58596875-58596894 | None:intergenic | 15.0% |
| !!! | GAATCATTTAATAATTTTCT+TGG | + | chr6_2:58597015-58597034 | Msa0921340:intron | 15.0% |
| !!! | GTTTTAATTGAAAACAAATT+TGG | - | chr6_2:58596875-58596894 | None:intergenic | 15.0% |
| !!! | GAATCATTTAATAATTTTCT+TGG | + | chr6_2:58597015-58597034 | Msa0921340:intron | 15.0% |
| !!! | TTCTGACATTCTAAAATATT+TGG | - | chr6_2:58596123-58596142 | None:intergenic | 20.0% |
| !! | ATTACTATTATTTAGAGGTA+TGG | - | chr6_2:58596515-58596534 | None:intergenic | 20.0% |
| !!! | TTCTGACATTCTAAAATATT+TGG | - | chr6_2:58596123-58596142 | None:intergenic | 20.0% |
| !! | ATTACTATTATTTAGAGGTA+TGG | - | chr6_2:58596515-58596534 | None:intergenic | 20.0% |
| !!! | ATAGATCATGGTTTTATCAT+AGG | + | chr6_2:58596067-58596086 | Msa0921340:CDS | 25.0% |
| ! | TTAGAATGTCAGAAAAACAA+TGG | + | chr6_2:58596129-58596148 | Msa0921340:intron | 25.0% |
| !!! | ATTTTGTTATGAAATTACGC+AGG | + | chr6_2:58596234-58596253 | Msa0921340:intron | 25.0% |
| !! | TTGATTTTATCCATTCCTAT+AGG | + | chr6_2:58596584-58596603 | Msa0921340:intron | 25.0% |
| ! | CAATGAATTTCGTAAAATCA+TGG | + | chr6_2:58596788-58596807 | Msa0921340:intron | 25.0% |
| !! | TGTAACTTTTGTCAAAATCA+CGG | + | chr6_2:58596841-58596860 | Msa0921340:intron | 25.0% |
| !!! | ATAGATCATGGTTTTATCAT+AGG | + | chr6_2:58596067-58596086 | Msa0921340:CDS | 25.0% |
| ! | TTAGAATGTCAGAAAAACAA+TGG | + | chr6_2:58596129-58596148 | Msa0921340:intron | 25.0% |
| !!! | ATTTTGTTATGAAATTACGC+AGG | + | chr6_2:58596234-58596253 | Msa0921340:intron | 25.0% |
| !! | TTGATTTTATCCATTCCTAT+AGG | + | chr6_2:58596584-58596603 | Msa0921340:intron | 25.0% |
| ! | CAATGAATTTCGTAAAATCA+TGG | + | chr6_2:58596788-58596807 | Msa0921340:intron | 25.0% |
| !! | TGTAACTTTTGTCAAAATCA+CGG | + | chr6_2:58596841-58596860 | Msa0921340:intron | 25.0% |
| ATGAATAGAGCAATAGATCA+TGG | + | chr6_2:58596055-58596074 | Msa0921340:CDS | 30.0% | |
| ATTTGGCAAATGTGAAAGAT+AGG | - | chr6_2:58596106-58596125 | None:intergenic | 30.0% | |
| TAAGTCTATCAATCACCTAT+AGG | - | chr6_2:58596602-58596621 | None:intergenic | 30.0% | |
| ! | AAATCAAAGGAGCGTATTAA+AGG | + | chr6_2:58596666-58596685 | Msa0921340:intron | 30.0% |
| ! | AATCAAAGGAGCGTATTAAA+GGG | + | chr6_2:58596667-58596686 | Msa0921340:intron | 30.0% |
| ATGAATAGAGCAATAGATCA+TGG | + | chr6_2:58596055-58596074 | Msa0921340:CDS | 30.0% | |
| ATTTGGCAAATGTGAAAGAT+AGG | - | chr6_2:58596106-58596125 | None:intergenic | 30.0% | |
| TAAGTCTATCAATCACCTAT+AGG | - | chr6_2:58596602-58596621 | None:intergenic | 30.0% | |
| ! | AAATCAAAGGAGCGTATTAA+AGG | + | chr6_2:58596666-58596685 | Msa0921340:intron | 30.0% |
| ! | AATCAAAGGAGCGTATTAAA+GGG | + | chr6_2:58596667-58596686 | Msa0921340:intron | 30.0% |
| TGCATGTATGTCATTGTTCT+AGG | + | chr6_2:58596016-58596035 | Msa0921340:CDS | 35.0% | |
| ! | TATGTCATTGTTCTAGGCAT+TGG | + | chr6_2:58596022-58596041 | Msa0921340:CDS | 35.0% |
| TTACCGGACTTGAATTACTT+CGG | + | chr6_2:58596204-58596223 | Msa0921340:intron | 35.0% | |
| TGAGCTGGAAGATTTAATTC+CGG | - | chr6_2:58596261-58596280 | None:intergenic | 35.0% | |
| AAAATGGGTGAAAAATGAGC+TGG | - | chr6_2:58596276-58596295 | None:intergenic | 35.0% | |
| TTTCCCATTGGGAAGAAAAT+GGG | - | chr6_2:58596291-58596310 | None:intergenic | 35.0% | |
| ATTTCCCATTGGGAAGAAAA+TGG | - | chr6_2:58596292-58596311 | None:intergenic | 35.0% | |
| GTTACGATTTCTTTGTTAGC+TGG | + | chr6_2:58596330-58596349 | Msa0921340:CDS | 35.0% | |
| GAGTCAAACATATCTGTTCA+TGG | + | chr6_2:58596382-58596401 | Msa0921340:CDS | 35.0% | |
| AAAGAGAGAAATTTACCCCA+TGG | - | chr6_2:58596472-58596491 | None:intergenic | 35.0% | |
| CTATCAATCACCTATAGGAA+TGG | - | chr6_2:58596597-58596616 | None:intergenic | 35.0% | |
| ! | TGCTCTTCTTTTATCTTACC+AGG | + | chr6_2:58596749-58596768 | Msa0921340:intron | 35.0% |
| TTAACTTCTGCAGATTTGCA+TGG | + | chr6_2:58596942-58596961 | Msa0921340:intron | 35.0% | |
| TCAAATTAGAAATGCACGTC+TGG | + | chr6_2:58596979-58596998 | Msa0921340:CDS | 35.0% | |
| GATAATTATGAAAGCCTCCA+TGG | - | chr6_2:58597087-58597106 | None:intergenic | 35.0% | |
| CTCTACATAGTTGCAATTCA+TGG | + | chr6_2:58597125-58597144 | Msa0921340:CDS | 35.0% | |
| TGCATGTATGTCATTGTTCT+AGG | + | chr6_2:58596016-58596035 | Msa0921340:CDS | 35.0% | |
| ! | TATGTCATTGTTCTAGGCAT+TGG | + | chr6_2:58596022-58596041 | Msa0921340:CDS | 35.0% |
| TTACCGGACTTGAATTACTT+CGG | + | chr6_2:58596204-58596223 | Msa0921340:intron | 35.0% | |
| TGAGCTGGAAGATTTAATTC+CGG | - | chr6_2:58596261-58596280 | None:intergenic | 35.0% | |
| AAAATGGGTGAAAAATGAGC+TGG | - | chr6_2:58596276-58596295 | None:intergenic | 35.0% | |
| TTTCCCATTGGGAAGAAAAT+GGG | - | chr6_2:58596291-58596310 | None:intergenic | 35.0% | |
| ATTTCCCATTGGGAAGAAAA+TGG | - | chr6_2:58596292-58596311 | None:intergenic | 35.0% | |
| GTTACGATTTCTTTGTTAGC+TGG | + | chr6_2:58596330-58596349 | Msa0921340:CDS | 35.0% | |
| GAGTCAAACATATCTGTTCA+TGG | + | chr6_2:58596382-58596401 | Msa0921340:CDS | 35.0% | |
| AAAGAGAGAAATTTACCCCA+TGG | - | chr6_2:58596472-58596491 | None:intergenic | 35.0% | |
| CTATCAATCACCTATAGGAA+TGG | - | chr6_2:58596597-58596616 | None:intergenic | 35.0% | |
| ! | TGCTCTTCTTTTATCTTACC+AGG | + | chr6_2:58596749-58596768 | Msa0921340:intron | 35.0% |
| TTAACTTCTGCAGATTTGCA+TGG | + | chr6_2:58596942-58596961 | Msa0921340:intron | 35.0% | |
| TCAAATTAGAAATGCACGTC+TGG | + | chr6_2:58596979-58596998 | Msa0921340:CDS | 35.0% | |
| GATAATTATGAAAGCCTCCA+TGG | - | chr6_2:58597087-58597106 | None:intergenic | 35.0% | |
| CTCTACATAGTTGCAATTCA+TGG | + | chr6_2:58597125-58597144 | Msa0921340:CDS | 35.0% | |
| ! | ATTTTTCGCAGCTATTTGCG+TGG | + | chr6_2:58596164-58596183 | Msa0921340:intron | 40.0% |
| AACGTGTGAGTTAGGTTTAC+CGG | + | chr6_2:58596188-58596207 | Msa0921340:intron | 40.0% | |
| ATGCCGAAGTAATTCAAGTC+CGG | - | chr6_2:58596210-58596229 | None:intergenic | 40.0% | |
| GTTATGAAATTACGCAGGTC+CGG | + | chr6_2:58596239-58596258 | Msa0921340:intron | 40.0% | |
| ! | TTCACCCATTTTCTTCCCAA+TGG | + | chr6_2:58596284-58596303 | Msa0921340:CDS | 40.0% |
| ! | TCACCCATTTTCTTCCCAAT+GGG | + | chr6_2:58596285-58596304 | Msa0921340:CDS | 40.0% |
| ! | CAGTTGAAGCATTTCCCATT+GGG | - | chr6_2:58596302-58596321 | None:intergenic | 40.0% |
| TCTTTGTTAGCTGGAGTAGT+TGG | + | chr6_2:58596339-58596358 | Msa0921340:CDS | 40.0% | |
| ! | TGCTGCTTCAATTGCTACTT+TGG | + | chr6_2:58596425-58596444 | Msa0921340:CDS | 40.0% |
| !! | CTTCAATTGCTACTTTGGCT+TGG | + | chr6_2:58596430-58596449 | Msa0921340:CDS | 40.0% |
| TATCTTACCAGGTGCATGTT+TGG | + | chr6_2:58596760-58596779 | Msa0921340:intron | 40.0% | |
| ! | CCATGGTTTTCTGCAAAAAG+AGG | - | chr6_2:58597070-58597089 | None:intergenic | 40.0% |
| ! | CCTCTTTTTGCAGAAAACCA+TGG | + | chr6_2:58597067-58597086 | Msa0921340:intron | 40.0% |
| ! | CTTTTTGCAGAAAACCATGG+AGG | + | chr6_2:58597070-58597089 | Msa0921340:intron | 40.0% |
| AGAGAAGCTGTGTAACTGAA+AGG | - | chr6_2:58597109-58597128 | None:intergenic | 40.0% | |
| ! | ATTTTTCGCAGCTATTTGCG+TGG | + | chr6_2:58596164-58596183 | Msa0921340:intron | 40.0% |
| AACGTGTGAGTTAGGTTTAC+CGG | + | chr6_2:58596188-58596207 | Msa0921340:intron | 40.0% | |
| ATGCCGAAGTAATTCAAGTC+CGG | - | chr6_2:58596210-58596229 | None:intergenic | 40.0% | |
| GTTATGAAATTACGCAGGTC+CGG | + | chr6_2:58596239-58596258 | Msa0921340:intron | 40.0% | |
| ! | TTCACCCATTTTCTTCCCAA+TGG | + | chr6_2:58596284-58596303 | Msa0921340:CDS | 40.0% |
| ! | TCACCCATTTTCTTCCCAAT+GGG | + | chr6_2:58596285-58596304 | Msa0921340:CDS | 40.0% |
| ! | CAGTTGAAGCATTTCCCATT+GGG | - | chr6_2:58596302-58596321 | None:intergenic | 40.0% |
| TCTTTGTTAGCTGGAGTAGT+TGG | + | chr6_2:58596339-58596358 | Msa0921340:CDS | 40.0% | |
| ! | TGCTGCTTCAATTGCTACTT+TGG | + | chr6_2:58596425-58596444 | Msa0921340:CDS | 40.0% |
| !! | CTTCAATTGCTACTTTGGCT+TGG | + | chr6_2:58596430-58596449 | Msa0921340:CDS | 40.0% |
| TATCTTACCAGGTGCATGTT+TGG | + | chr6_2:58596760-58596779 | Msa0921340:intron | 40.0% | |
| ! | CCATGGTTTTCTGCAAAAAG+AGG | - | chr6_2:58597070-58597089 | None:intergenic | 40.0% |
| ! | CCTCTTTTTGCAGAAAACCA+TGG | + | chr6_2:58597067-58597086 | Msa0921340:intron | 40.0% |
| ! | CTTTTTGCAGAAAACCATGG+AGG | + | chr6_2:58597070-58597089 | Msa0921340:intron | 40.0% |
| AGAGAAGCTGTGTAACTGAA+AGG | - | chr6_2:58597109-58597128 | None:intergenic | 40.0% | |
| GTCCATAGCAACACTTCTCT+TGG | + | chr6_2:58595982-58596001 | Msa0921340:CDS | 45.0% | |
| !! | CACCAAGAGAAGTGTTGCTA+TGG | - | chr6_2:58595987-58596006 | None:intergenic | 45.0% |
| !! | TTGTTCTAGGCATTGGTGCA+TGG | + | chr6_2:58596029-58596048 | Msa0921340:CDS | 45.0% |
| !! | TGTTCTAGGCATTGGTGCAT+GGG | + | chr6_2:58596030-58596049 | Msa0921340:CDS | 45.0% |
| ! | CCAGTTGAAGCATTTCCCAT+TGG | - | chr6_2:58596303-58596322 | None:intergenic | 45.0% |
| CCAATGGGAAATGCTTCAAC+TGG | + | chr6_2:58596300-58596319 | Msa0921340:CDS | 45.0% | |
| GTAGCAATTGAAGCAGCAGA+TGG | - | chr6_2:58596423-58596442 | None:intergenic | 45.0% | |
| ACTCTTACACTGCTTGCCAT+GGG | + | chr6_2:58596453-58596472 | Msa0921340:CDS | 45.0% | |
| TGTCAATCCAAACATGCACC+TGG | - | chr6_2:58596770-58596789 | None:intergenic | 45.0% | |
| GTCCATAGCAACACTTCTCT+TGG | + | chr6_2:58595982-58596001 | Msa0921340:CDS | 45.0% | |
| !! | CACCAAGAGAAGTGTTGCTA+TGG | - | chr6_2:58595987-58596006 | None:intergenic | 45.0% |
| !! | TTGTTCTAGGCATTGGTGCA+TGG | + | chr6_2:58596029-58596048 | Msa0921340:CDS | 45.0% |
| !! | TGTTCTAGGCATTGGTGCAT+GGG | + | chr6_2:58596030-58596049 | Msa0921340:CDS | 45.0% |
| ! | CCAGTTGAAGCATTTCCCAT+TGG | - | chr6_2:58596303-58596322 | None:intergenic | 45.0% |
| CCAATGGGAAATGCTTCAAC+TGG | + | chr6_2:58596300-58596319 | Msa0921340:CDS | 45.0% | |
| GTAGCAATTGAAGCAGCAGA+TGG | - | chr6_2:58596423-58596442 | None:intergenic | 45.0% | |
| ACTCTTACACTGCTTGCCAT+GGG | + | chr6_2:58596453-58596472 | Msa0921340:CDS | 45.0% | |
| TGTCAATCCAAACATGCACC+TGG | - | chr6_2:58596770-58596789 | None:intergenic | 45.0% | |
| ! | TGCGTGGTAACGTGTGAGTT+AGG | + | chr6_2:58596180-58596199 | Msa0921340:intron | 50.0% |
| ! | GGTGCTGCATCGACAATTTC+AGG | + | chr6_2:58596360-58596379 | Msa0921340:CDS | 50.0% |
| GACTCTTACACTGCTTGCCA+TGG | + | chr6_2:58596452-58596471 | Msa0921340:CDS | 50.0% | |
| CTCTTACACTGCTTGCCATG+GGG | + | chr6_2:58596454-58596473 | Msa0921340:CDS | 50.0% | |
| ! | TGCGTGGTAACGTGTGAGTT+AGG | + | chr6_2:58596180-58596199 | Msa0921340:intron | 50.0% |
| ! | GGTGCTGCATCGACAATTTC+AGG | + | chr6_2:58596360-58596379 | Msa0921340:CDS | 50.0% |
| GACTCTTACACTGCTTGCCA+TGG | + | chr6_2:58596452-58596471 | Msa0921340:CDS | 50.0% | |
| CTCTTACACTGCTTGCCATG+GGG | + | chr6_2:58596454-58596473 | Msa0921340:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 58595964 | 58597175 | 58595964 | ID=Msa0921340;Name=Msa0921340 |
| chr6_2 | mRNA | 58595964 | 58597175 | 58595964 | ID=Msa0921340-mRNA-1;Parent=Msa0921340;Name=Msa0921340-mRNA-1;_AED=0.05;_eAED=0.05;_QI=13|1|0.75|1|1|1|4|0|157 |
| chr6_2 | exon | 58595964 | 58596088 | 58595964 | ID=Msa0921340-mRNA-1:exon:8720;Parent=Msa0921340-mRNA-1 |
| chr6_2 | exon | 58596256 | 58596475 | 58596256 | ID=Msa0921340-mRNA-1:exon:8721;Parent=Msa0921340-mRNA-1 |
| chr6_2 | exon | 58596955 | 58597000 | 58596955 | ID=Msa0921340-mRNA-1:exon:8722;Parent=Msa0921340-mRNA-1 |
| chr6_2 | exon | 58597080 | 58597175 | 58597080 | ID=Msa0921340-mRNA-1:exon:8723;Parent=Msa0921340-mRNA-1 |
| chr6_2 | five_prime_UTR | 58595964 | 58595976 | 58595964 | ID=Msa0921340-mRNA-1:five_prime_utr;Parent=Msa0921340-mRNA-1 |
| chr6_2 | CDS | 58595977 | 58596088 | 58595977 | ID=Msa0921340-mRNA-1:cds;Parent=Msa0921340-mRNA-1 |
| chr6_2 | CDS | 58596256 | 58596475 | 58596256 | ID=Msa0921340-mRNA-1:cds;Parent=Msa0921340-mRNA-1 |
| chr6_2 | CDS | 58596955 | 58597000 | 58596955 | ID=Msa0921340-mRNA-1:cds;Parent=Msa0921340-mRNA-1 |
| chr6_2 | CDS | 58597080 | 58597175 | 58597080 | ID=Msa0921340-mRNA-1:cds;Parent=Msa0921340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
