Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63708.t1 | XP_013444949.1 | 98.6 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 2.60E-170 | 607.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63708.t1 | Q9LEW8 | 80.6 | 294 | 56 | 1 | 1 | 293 | 33 | 326 | 3.6e-144 | 512.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63708.t1 | A0A072TNA5 | 98.6 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 1.9e-170 | 607.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene63708 | 0.892155 | 2.06E-74 | -1.69E-46 |
| MS.gene049173 | MS.gene63708 | 0.836569 | 8.66E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene63708 | 0.867539 | 1.27E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene63708 | 0.90225 | 1.17E-78 | -1.69E-46 |
| MS.gene049232 | MS.gene63708 | 0.842563 | 2.40E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene63708 | 0.899879 | 1.28E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene63708 | 0.883197 | 5.50E-71 | -1.69E-46 |
| MS.gene04939 | MS.gene63708 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene63708 | 0.861001 | 1.39E-63 | -1.69E-46 |
| MS.gene049611 | MS.gene63708 | -0.817154 | 3.82E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene63708 | 0.818251 | 2.16E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene63708 | 0.873003 | 2.06E-67 | -1.69E-46 |
| MS.gene049634 | MS.gene63708 | -0.808992 | 2.36E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene63708 | 0.816123 | 6.50E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene63708 | 0.847622 | 1.03E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene63708 | 0.870826 | 1.09E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene63708 | 0.869945 | 2.12E-66 | -1.69E-46 |
| MS.gene050170 | MS.gene63708 | 0.843664 | 1.22E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene63708 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene63708 | 0.86874 | 5.22E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene63708 | 0.877802 | 4.69E-69 | -1.69E-46 |
| MS.gene050444 | MS.gene63708 | 0.891039 | 5.71E-74 | -1.69E-46 |
| MS.gene050496 | MS.gene63708 | 0.874923 | 4.62E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene63708 | 0.887619 | 1.22E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene63708 | 0.871112 | 8.75E-67 | -1.69E-46 |
| MS.gene050538 | MS.gene63708 | 0.813315 | 2.72E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene63708 | 0.849003 | 4.27E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene63708 | 0.833478 | 5.21E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene63708 | 0.898965 | 3.16E-77 | -1.69E-46 |
| MS.gene050662 | MS.gene63708 | 0.817951 | 2.53E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene63708 | 0.906672 | 1.16E-80 | -1.69E-46 |
| MS.gene050699 | MS.gene63708 | 0.899109 | 2.74E-77 | -1.69E-46 |
| MS.gene050747 | MS.gene63708 | 0.852564 | 4.25E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene63708 | 0.879728 | 9.83E-70 | -1.69E-46 |
| MS.gene05079 | MS.gene63708 | -0.822624 | 2.14E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene63708 | 0.881915 | 1.61E-70 | -1.69E-46 |
| MS.gene05081 | MS.gene63708 | 0.823256 | 1.53E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene63708 | 0.878071 | 3.78E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene63708 | 0.875524 | 2.88E-68 | -1.69E-46 |
| MS.gene050876 | MS.gene63708 | 0.847861 | 8.85E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene63708 | 0.862926 | 3.59E-64 | -1.69E-46 |
| MS.gene050950 | MS.gene63708 | 0.843349 | 1.48E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene63708 | 0.879298 | 1.40E-69 | -1.69E-46 |
| MS.gene05100 | MS.gene63708 | 0.836136 | 1.12E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene63708 | -0.800558 | 1.36E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene63708 | 0.850074 | 2.15E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene63708 | 0.848243 | 6.94E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene63708 | 0.872094 | 4.14E-67 | -1.69E-46 |
| MS.gene051387 | MS.gene63708 | 0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene63708 | 0.854462 | 1.21E-61 | -1.69E-46 |
| MS.gene051617 | MS.gene63708 | 0.834945 | 2.23E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene63708 | 0.832323 | 1.01E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene63708 | 0.828442 | 8.97E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene63708 | 0.859166 | 4.99E-63 | -1.69E-46 |
| MS.gene051838 | MS.gene63708 | 0.857825 | 1.25E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene63708 | 0.85104 | 1.15E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene63708 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene63708 | 0.891147 | 5.18E-74 | -1.69E-46 |
| MS.gene052129 | MS.gene63708 | -0.830615 | 2.66E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene63708 | 0.849337 | 3.45E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene63708 | 0.827772 | 1.30E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene63708 | 0.850473 | 1.66E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene63708 | 0.82742 | 1.58E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene63708 | 0.845227 | 4.63E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene63708 | 0.841549 | 4.44E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene63708 | 0.829564 | 4.80E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene63708 | 0.848226 | 7.01E-60 | -1.69E-46 |
| MS.gene052822 | MS.gene63708 | 0.835293 | 1.83E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene63708 | 0.831753 | 1.40E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene63708 | 0.833752 | 4.45E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene63708 | 0.866619 | 2.50E-65 | -1.69E-46 |
| MS.gene052872 | MS.gene63708 | 0.871848 | 5.00E-67 | -1.69E-46 |
| MS.gene052916 | MS.gene63708 | 0.826232 | 3.04E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene63708 | 0.896679 | 2.93E-76 | -1.69E-46 |
| MS.gene053104 | MS.gene63708 | 0.824535 | 7.66E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene63708 | 0.878247 | 3.28E-69 | -1.69E-46 |
| MS.gene053207 | MS.gene63708 | 0.872112 | 4.08E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene63708 | 0.86329 | 2.77E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene63708 | 0.862935 | 3.56E-64 | -1.69E-46 |
| MS.gene053420 | MS.gene63708 | -0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene63708 | 0.831118 | 2.00E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene63708 | 0.820534 | 6.52E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene63708 | 0.885341 | 8.84E-72 | -1.69E-46 |
| MS.gene053480 | MS.gene63708 | 0.83287 | 7.39E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene63708 | 0.848321 | 6.60E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene63708 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene63708 | 0.882847 | 7.39E-71 | -1.69E-46 |
| MS.gene053633 | MS.gene63708 | 0.82257 | 2.21E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene63708 | 0.880179 | 6.79E-70 | -1.69E-46 |
| MS.gene053916 | MS.gene63708 | 0.837153 | 6.15E-57 | -1.69E-46 |
| MS.gene054003 | MS.gene63708 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene63708 | 0.806151 | 9.46E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene63708 | 0.871111 | 8.76E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene63708 | 0.906989 | 8.22E-81 | -1.69E-46 |
| MS.gene054642 | MS.gene63708 | 0.867647 | 1.17E-65 | -1.69E-46 |
| MS.gene054706 | MS.gene63708 | -0.833376 | 5.52E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene63708 | 0.844167 | 8.94E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene63708 | 0.804755 | 1.85E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene63708 | 0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene63708 | 0.891147 | 5.18E-74 | -1.69E-46 |
| MS.gene05505 | MS.gene63708 | 0.804566 | 2.03E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene63708 | 0.871064 | 9.08E-67 | -1.69E-46 |
| MS.gene055212 | MS.gene63708 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene63708 | 0.833569 | 4.95E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene63708 | 0.805952 | 1.04E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene63708 | 0.893597 | 5.42E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene63708 | 0.889299 | 2.74E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene63708 | 0.912108 | 2.84E-83 | -1.69E-46 |
| MS.gene055636 | MS.gene63708 | 0.8271 | 1.88E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene63708 | 0.832842 | 7.50E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene63708 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene63708 | 0.868996 | 4.31E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene63708 | 0.887449 | 1.41E-72 | -1.69E-46 |
| MS.gene055750 | MS.gene63708 | 0.876906 | 9.62E-69 | -1.69E-46 |
| MS.gene055751 | MS.gene63708 | 0.891008 | 5.88E-74 | -1.69E-46 |
| MS.gene055776 | MS.gene63708 | 0.842555 | 2.41E-58 | -1.69E-46 |
| MS.gene05589 | MS.gene63708 | 0.859236 | 4.76E-63 | -1.69E-46 |
| MS.gene05592 | MS.gene63708 | 0.838538 | 2.71E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene63708 | 0.889678 | 1.95E-73 | -1.69E-46 |
| MS.gene056083 | MS.gene63708 | 0.828398 | 9.19E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene63708 | 0.84949 | 3.13E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene63708 | 0.829437 | 5.15E-55 | -1.69E-46 |
| MS.gene056409 | MS.gene63708 | 0.812535 | 4.04E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene63708 | 0.841367 | 4.96E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene63708 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene63708 | 0.880508 | 5.18E-70 | -1.69E-46 |
| MS.gene056510 | MS.gene63708 | 0.904222 | 1.54E-79 | -1.69E-46 |
| MS.gene056549 | MS.gene63708 | 0.81154 | 6.65E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene63708 | 0.811572 | 6.55E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene63708 | 0.889967 | 1.51E-73 | -1.69E-46 |
| MS.gene05666 | MS.gene63708 | 0.81377 | 2.16E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene63708 | 0.852755 | 3.75E-61 | -1.69E-46 |
| MS.gene056946 | MS.gene63708 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene056947 | MS.gene63708 | 0.843584 | 1.28E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene63708 | 0.836308 | 1.01E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene63708 | 0.806466 | 8.11E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene63708 | 0.803116 | 4.07E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene63708 | 0.858204 | 9.67E-63 | -1.69E-46 |
| MS.gene057332 | MS.gene63708 | 0.835373 | 1.74E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene63708 | 0.846617 | 1.94E-59 | -1.69E-46 |
| MS.gene057658 | MS.gene63708 | 0.855241 | 7.20E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene63708 | 0.816147 | 6.43E-52 | -1.69E-46 |
| MS.gene057805 | MS.gene63708 | 0.806797 | 6.91E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene63708 | 0.88884 | 4.13E-73 | -1.69E-46 |
| MS.gene057857 | MS.gene63708 | 0.848553 | 5.70E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene63708 | 0.816916 | 4.32E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene63708 | 0.835869 | 1.31E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene63708 | 0.815388 | 9.48E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene63708 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene63708 | -0.814167 | 1.77E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene63708 | 0.841676 | 4.11E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene63708 | 0.870883 | 1.04E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene63708 | 0.882916 | 6.97E-71 | -1.69E-46 |
| MS.gene058544 | MS.gene63708 | 0.857687 | 1.38E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene63708 | 0.865479 | 5.73E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene63708 | 0.920584 | 1.06E-87 | -1.69E-46 |
| MS.gene058838 | MS.gene63708 | 0.874434 | 6.78E-68 | -1.69E-46 |
| MS.gene059022 | MS.gene63708 | 0.893757 | 4.67E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene63708 | 0.898101 | 7.38E-77 | -1.69E-46 |
| MS.gene059029 | MS.gene63708 | 0.840873 | 6.69E-58 | -1.69E-46 |
| MS.gene059079 | MS.gene63708 | 0.810816 | 9.55E-51 | -1.69E-46 |
| MS.gene05912 | MS.gene63708 | 0.822545 | 2.24E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene63708 | 0.845689 | 3.47E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene63708 | 0.817126 | 3.88E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene63708 | 0.812018 | 5.24E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene63708 | 0.857021 | 2.17E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene63708 | 0.828806 | 7.32E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene63708 | 0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene63708 | 0.897182 | 1.80E-76 | -1.69E-46 |
| MS.gene059699 | MS.gene63708 | -0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene63708 | -0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene63708 | 0.896755 | 2.72E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene63708 | 0.863692 | 2.08E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene63708 | 0.846116 | 2.66E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene63708 | 0.877005 | 8.88E-69 | -1.69E-46 |
| MS.gene059902 | MS.gene63708 | 0.842107 | 3.16E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene63708 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene63708 | 0.860468 | 2.02E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene63708 | 0.813309 | 2.73E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene63708 | 0.827033 | 1.96E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene63708 | 0.859201 | 4.87E-63 | -1.69E-46 |
| MS.gene060728 | MS.gene63708 | 0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene63708 | 0.880668 | 4.54E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene63708 | 0.832398 | 9.67E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene63708 | 0.867247 | 1.58E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene63708 | 0.810184 | 1.31E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene63708 | 0.827307 | 1.68E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene63708 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene63708 | 0.859014 | 5.54E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene63708 | 0.875687 | 2.53E-68 | -1.69E-46 |
| MS.gene061041 | MS.gene63708 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene63708 | 0.881599 | 2.10E-70 | -1.69E-46 |
| MS.gene061200 | MS.gene63708 | 0.820747 | 5.82E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63708.t1 | MTR_8g032700 | 98.635 | 293 | 4 | 0 | 1 | 293 | 27 | 319 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63708.t1 | AT3G61080 | 80.612 | 294 | 56 | 1 | 1 | 293 | 33 | 326 | 0.0 | 509 |
| MS.gene63708.t1 | AT3G61080 | 74.062 | 320 | 56 | 2 | 1 | 293 | 33 | 352 | 2.89e-178 | 496 |
Find 82 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGGAATTCATAGAATT+TGG | 0.175018 | 8.4:-63078371 | MS.gene63708:CDS |
| GAGGCGGAGGCTCTTGGTTT+AGG | 0.187864 | 8.4:-63078747 | MS.gene63708:CDS |
| TGGTGGTTCTTTCATCATTA+TGG | 0.241705 | 8.4:-63078387 | MS.gene63708:CDS |
| CTTGCTTCCCAGTCTGTTCT+AGG | 0.246454 | 8.4:-63078274 | MS.gene63708:intron |
| AGGCGGAGGCTCTTGGTTTA+GGG | 0.248825 | 8.4:-63078746 | MS.gene63708:CDS |
| ATATAGTGACAGGACCATTT+TGG | 0.278148 | 8.4:-63077968 | MS.gene63708:CDS |
| GGACACAATGAGGCGGAATT+TGG | 0.287193 | 8.4:-63076435 | MS.gene63708:CDS |
| TTAAATCATTACAACCTCTT+TGG | 0.302998 | 8.4:-63076054 | MS.gene63708:CDS |
| TTCTCAAAGCCTGGCTGTTT+AGG | 0.332137 | 8.4:+63076108 | None:intergenic |
| TTTGGTATGTCTTGGTGTGC+TGG | 0.332703 | 8.4:-63076417 | MS.gene63708:CDS |
| ATGTCTTGGTGTGCTGGCTT+TGG | 0.369964 | 8.4:-63076411 | MS.gene63708:CDS |
| AAATGGAGAGCCTGTCATAT+TGG | 0.375682 | 8.4:-63076895 | MS.gene63708:CDS |
| CTTTCTTTGTTAAAACAAAC+AGG | 0.387212 | 8.4:-63078905 | MS.gene63708:intron |
| TAAATACCTGGTCTTCAGAT+TGG | 0.390832 | 8.4:-63078047 | MS.gene63708:CDS |
| AAATGGTCCTGTCACTATAT+TGG | 0.394002 | 8.4:+63077971 | None:intergenic |
| CATTACAACCTCTTTGGCTC+TGG | 0.409972 | 8.4:-63076048 | MS.gene63708:CDS |
| GGAAAATCTAGTAAAGGCTT+TGG | 0.418088 | 8.4:-63078223 | MS.gene63708:CDS |
| TCTTGGTGTGCTGGCTTTGG+AGG | 0.425900 | 8.4:-63076408 | MS.gene63708:CDS |
| CTTGCGGAAATGCACAAGTC+TGG | 0.432979 | 8.4:-63078244 | MS.gene63708:CDS |
| TTGATACAACCACCACCAAC+TGG | 0.433145 | 8.4:+63078960 | None:intergenic |
| ATTAGTGTGCAGCATGAGTA+AGG | 0.434515 | 8.4:-63079042 | None:intergenic |
| GCCTCCGCCTCAAACATTGA+TGG | 0.437138 | 8.4:+63078759 | None:intergenic |
| ACCACCAACTGGACTAACTT+TGG | 0.437254 | 8.4:+63078971 | None:intergenic |
| TCTAGCTTATTTAAAAGCTT+AGG | 0.444051 | 8.4:-63075989 | None:intergenic |
| GGTCAAATGCCAGCTGCAAC+TGG | 0.448517 | 8.4:+63077992 | None:intergenic |
| TCCATCAATGTTTGAGGCGG+AGG | 0.448548 | 8.4:-63078760 | MS.gene63708:CDS |
| ATGTTTGAGGCGGAGGCTCT+TGG | 0.450318 | 8.4:-63078753 | MS.gene63708:CDS |
| AAATTTGATATCAGGAGTAT+TGG | 0.451209 | 8.4:-63078783 | MS.gene63708:intron |
| TCTCTCCTCTTCTCAAAGCC+TGG | 0.466803 | 8.4:+63076099 | None:intergenic |
| AATAGTGATACAGCAGGTAT+AGG | 0.467243 | 8.4:+63076076 | None:intergenic |
| GAGAGAATCCATTCACGAAC+CGG | 0.474449 | 8.4:+63079017 | None:intergenic |
| TAGGTTGGATCGCTACCGTC+TGG | 0.477825 | 8.4:-63078407 | MS.gene63708:CDS |
| CTTGACTTACAATAACATGC+TGG | 0.482072 | 8.4:+63076870 | None:intergenic |
| GCTTGCTACATGGAGATCTC+TGG | 0.483794 | 8.4:-63076941 | MS.gene63708:CDS |
| GTAAGGATCCGGTTCGTGAA+TGG | 0.503536 | 8.4:-63079025 | MS.gene63708:CDS |
| CTTAGGCACACGGATGGTCC+TGG | 0.510384 | 8.4:+63078710 | None:intergenic |
| ATGGAATTCATAGAATTTGG+CGG | 0.510748 | 8.4:-63078368 | MS.gene63708:CDS |
| GGCGGAGGCTCTTGGTTTAG+GGG | 0.512741 | 8.4:-63078745 | MS.gene63708:CDS |
| ATTTGGCGGATCTAGAGATC+AGG | 0.518102 | 8.4:-63078354 | MS.gene63708:intron |
| TTGTTCTACAGGGCAGAGAC+TGG | 0.520409 | 8.4:-63077009 | MS.gene63708:intron |
| CTGAATCCAATCTGAAGACC+AGG | 0.527295 | 8.4:+63078041 | None:intergenic |
| GTGCAGCATGAGTAAGGATC+CGG | 0.532558 | 8.4:-63079036 | None:intergenic |
| TATTGGTCCATCAATGTTTG+AGG | 0.535521 | 8.4:-63078766 | MS.gene63708:CDS |
| AAGTCTGGAAAATCTAGTAA+AGG | 0.537898 | 8.4:-63078229 | MS.gene63708:CDS |
| ATTAGGTTACCAGTTGCAGC+TGG | 0.542187 | 8.4:-63078001 | MS.gene63708:CDS |
| CCGTGTGCCTAAGCCGTACA+AGG | 0.543019 | 8.4:-63078700 | MS.gene63708:intron |
| AACAGCCAGGCTTTGAGAAG+AGG | 0.543273 | 8.4:-63076104 | MS.gene63708:CDS |
| CGTGAATGGATTCTCTCTGA+AGG | 0.545145 | 8.4:-63079011 | MS.gene63708:CDS |
| AAAGTTAGTCCAGTTGGTGG+TGG | 0.546218 | 8.4:-63078969 | MS.gene63708:CDS |
| CAGGTAATGCCTAAACAGCC+AGG | 0.547187 | 8.4:-63076117 | MS.gene63708:CDS |
| ATAACCAAAGTTAGTCCAGT+TGG | 0.549921 | 8.4:-63078975 | MS.gene63708:CDS |
| AATCGCTACGACACTGATGC+TGG | 0.550786 | 8.4:-63078930 | MS.gene63708:CDS |
| CTTCCCAGTCTGTTCTAGGA+AGG | 0.552709 | 8.4:-63078270 | MS.gene63708:intron |
| ATAGAACCATGCTTGCTACA+TGG | 0.553025 | 8.4:-63076951 | MS.gene63708:CDS |
| CCTTGTACGGCTTAGGCACA+CGG | 0.555435 | 8.4:+63078700 | None:intergenic |
| TTTCTCACCTTGTACGGCTT+AGG | 0.561288 | 8.4:+63078693 | None:intergenic |
| CATGCTGGGTCCAATATGAC+AGG | 0.564436 | 8.4:+63076885 | None:intergenic |
| ACGTCGAAAACACCATTGGC+AGG | 0.564439 | 8.4:-63078195 | MS.gene63708:intron |
| TTCTACAGGGCAGAGACTGG+TGG | 0.568183 | 8.4:-63077006 | MS.gene63708:intron |
| TTCGACGTCGAAAACACCAT+TGG | 0.568188 | 8.4:-63078199 | MS.gene63708:CDS |
| ATCTGTATCCAGAGCCAAAG+AGG | 0.571034 | 8.4:+63076040 | None:intergenic |
| TACAATAACATACCTGCCAA+TGG | 0.575680 | 8.4:+63078183 | None:intergenic |
| AGGCGGAATTTGGTATGTCT+TGG | 0.583665 | 8.4:-63076425 | MS.gene63708:CDS |
| AGATCTCCATGTAGCAAGCA+TGG | 0.585342 | 8.4:+63076945 | None:intergenic |
| ACCAAAGTTAGTCCAGTTGG+TGG | 0.585827 | 8.4:-63078972 | MS.gene63708:CDS |
| CATTTGACCAATATAGTGAC+AGG | 0.593763 | 8.4:-63077978 | MS.gene63708:CDS |
| GATTTAAATAGTGATACAGC+AGG | 0.595693 | 8.4:+63076070 | None:intergenic |
| TTGACTTACAATAACATGCT+GGG | 0.601426 | 8.4:+63076871 | None:intergenic |
| TTCTATAGATGGACACAATG+AGG | 0.610520 | 8.4:-63076445 | MS.gene63708:intron |
| GTGAATGGATTCTCTCTGAA+GGG | 0.611564 | 8.4:-63079010 | MS.gene63708:CDS |
| TGGTCCATCAATGTTTGAGG+CGG | 0.628959 | 8.4:-63078763 | MS.gene63708:CDS |
| TGCACCGCTGTTTGACAATG+TGG | 0.631338 | 8.4:-63076976 | MS.gene63708:CDS |
| GTACGGCTTAGGCACACGGA+TGG | 0.632306 | 8.4:+63078704 | None:intergenic |
| GTTGGATCGCTACCGTCTGG+TGG | 0.633372 | 8.4:-63078404 | MS.gene63708:CDS |
| GAAGACCAGGTATTTATCTG+TGG | 0.648619 | 8.4:+63078054 | None:intergenic |
| TAGGGGCTATGTATGAAACC+AGG | 0.667423 | 8.4:-63078728 | MS.gene63708:CDS |
| ATCTCCACATTGTCAAACAG+CGG | 0.677100 | 8.4:+63076972 | None:intergenic |
| CTACATGGAGATCTCTGGAG+CGG | 0.677656 | 8.4:-63076936 | MS.gene63708:CDS |
| TGTTCTAGGAAGGAAGCTTG+CGG | 0.677656 | 8.4:-63078260 | MS.gene63708:CDS |
| GCACACCACAGATAAATACC+TGG | 0.681671 | 8.4:-63078059 | MS.gene63708:CDS |
| ATGATGAAAGAACCACCAGA+CGG | 0.702040 | 8.4:+63078392 | None:intergenic |
| TATAGATGGACACAATGAGG+CGG | 0.706424 | 8.4:-63076442 | MS.gene63708:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTATATAAGGAAAAAT+TGG | - | chr8.4:63078530-63078549 | MS.gene63708:intron | 15.0% |
| !! | AAATTTATGAAAACCATTCT+TGG | - | chr8.4:63078727-63078746 | MS.gene63708:CDS | 20.0% |
| !! | AACAATCACAGAATTATATA+AGG | - | chr8.4:63078521-63078540 | MS.gene63708:intron | 20.0% |
| !! | ATTATGGAATTCATAGAATT+TGG | - | chr8.4:63076648-63076667 | MS.gene63708:intron | 20.0% |
| !! | GTATGTTATTGTAATTGTTA+TGG | - | chr8.4:63076846-63076865 | MS.gene63708:intron | 20.0% |
| !!! | ATTCTATAACTCTTATTTTG+AGG | - | chr8.4:63078637-63078656 | MS.gene63708:intron | 20.0% |
| !!! | TAATTTTAAATAATCTCTCC+AGG | - | chr8.4:63078883-63078902 | MS.gene63708:intron | 20.0% |
| !!! | TTCACTAAATTGGTTTTAAA+CGG | - | chr8.4:63077328-63077347 | MS.gene63708:intron | 20.0% |
| ! | AATATACTACCTTCAAATAG+CGG | - | chr8.4:63077571-63077590 | MS.gene63708:intron | 25.0% |
| ! | ACTGTATGATCTTAAATCAA+TGG | + | chr8.4:63077296-63077315 | None:intergenic | 25.0% |
| ! | AGATTACACATTCACTAAAT+TGG | - | chr8.4:63077318-63077337 | MS.gene63708:intron | 25.0% |
| ! | ATACACTAAAATCAAGTGTA+TGG | + | chr8.4:63077141-63077160 | None:intergenic | 25.0% |
| ! | ATCAAACATAAACAAAGAGT+CGG | - | chr8.4:63078267-63078286 | MS.gene63708:intron | 25.0% |
| ! | CAAGGATATATGTAAAAACA+AGG | + | chr8.4:63077508-63077527 | None:intergenic | 25.0% |
| ! | CTTTCTTTGTTAAAACAAAC+AGG | - | chr8.4:63076114-63076133 | MS.gene63708:CDS | 25.0% |
| ! | GAAAGTTGAAATTTGATATC+AGG | - | chr8.4:63076228-63076247 | MS.gene63708:intron | 25.0% |
| ! | GTCTGCAATATAAATAATCA+AGG | + | chr8.4:63077955-63077974 | None:intergenic | 25.0% |
| ! | TTAAATCATTACAACCTCTT+TGG | - | chr8.4:63078965-63078984 | MS.gene63708:CDS | 25.0% |
| ! | TTATATTGAATAAACTGAGC+AGG | - | chr8.4:63077166-63077185 | MS.gene63708:intron | 25.0% |
| ! | TTGAATGTAACAACATATCT+CGG | - | chr8.4:63076441-63076460 | MS.gene63708:intron | 25.0% |
| !! | AAAGTTACCTTTTTCCAAAA+TGG | + | chr8.4:63077068-63077087 | None:intergenic | 25.0% |
| !! | AAATTTGATATCAGGAGTAT+TGG | - | chr8.4:63076236-63076255 | MS.gene63708:intron | 25.0% |
| !! | TGATATTTTACACACACATT+TGG | - | chr8.4:63078366-63078385 | MS.gene63708:CDS | 25.0% |
| !! | TGATTTTTATCCATAGAAAC+AGG | - | chr8.4:63077753-63077772 | MS.gene63708:intron | 25.0% |
| !! | TTGAAGGTAGTATATTCTTT+TGG | + | chr8.4:63077567-63077586 | None:intergenic | 25.0% |
| !!! | ACTTTTGCAATTTTTTCTCA+TGG | - | chr8.4:63078309-63078328 | MS.gene63708:intron | 25.0% |
| !!! | ATTTATCATGTCTTTTTTCC+AGG | - | chr8.4:63076874-63076893 | MS.gene63708:intron | 25.0% |
| !!! | CTTGTTTTTACATATATCCT+TGG | - | chr8.4:63077506-63077525 | MS.gene63708:intron | 25.0% |
| AAACGGCCATTAATTTAGAT+CGG | - | chr8.4:63077345-63077364 | MS.gene63708:intron | 30.0% | |
| AACTTATTGCTAGGATTTGT+AGG | - | chr8.4:63076593-63076612 | MS.gene63708:intron | 30.0% | |
| AAGTCTGGAAAATCTAGTAA+AGG | - | chr8.4:63076790-63076809 | MS.gene63708:intron | 30.0% | |
| AATTGAGGTAACTTATTGCT+AGG | - | chr8.4:63076584-63076603 | MS.gene63708:intron | 30.0% | |
| AGTTACACTACTAGATATTC+CGG | + | chr8.4:63078215-63078234 | None:intergenic | 30.0% | |
| ATGGAATTCATAGAATTTGG+CGG | - | chr8.4:63076651-63076670 | MS.gene63708:intron | 30.0% | |
| ATTTGCAATTTCAGCTGTTA+AGG | - | chr8.4:63077612-63077631 | MS.gene63708:intron | 30.0% | |
| ATTTGTAAGAAGCTGTTGTT+TGG | - | chr8.4:63078173-63078192 | MS.gene63708:intron | 30.0% | |
| GATTTAAATAGTGATACAGC+AGG | + | chr8.4:63078952-63078971 | None:intergenic | 30.0% | |
| GTACAATGAGTTATGAAACA+TGG | - | chr8.4:63076136-63076155 | MS.gene63708:intron | 30.0% | |
| GTTTATTGCAGAGTGAAAAT+AGG | - | chr8.4:63077423-63077442 | MS.gene63708:intron | 30.0% | |
| TATCTAGTAGTGTAACTAGT+CGG | - | chr8.4:63078218-63078237 | MS.gene63708:CDS | 30.0% | |
| TCACGATGTAAATTAATCAC+AGG | - | chr8.4:63077659-63077678 | MS.gene63708:intron | 30.0% | |
| TGTCATATGTCATTGTATGT+TGG | - | chr8.4:63076464-63076483 | MS.gene63708:intron | 30.0% | |
| TGTTCTAGTCTCACATATTT+GGG | + | chr8.4:63078505-63078524 | None:intergenic | 30.0% | |
| TTACAAAAGATTTCCTTACC+TGG | + | chr8.4:63076895-63076914 | None:intergenic | 30.0% | |
| TTGACTTACAATAACATGCT+GGG | + | chr8.4:63078151-63078170 | None:intergenic | 30.0% | |
| TTGTTCTAGTCTCACATATT+TGG | + | chr8.4:63078506-63078525 | None:intergenic | 30.0% | |
| TTTCACTCTGCAATAAACTT+GGG | + | chr8.4:63077421-63077440 | None:intergenic | 30.0% | |
| ! | AACATAAGCTCTGACAAAAA+TGG | - | chr8.4:63078107-63078126 | MS.gene63708:intron | 30.0% |
| ! | TAAAGTTTTCTCACCTTGTA+CGG | + | chr8.4:63076335-63076354 | None:intergenic | 30.0% |
| ! | TCAGATTGGATTCAGTTTTA+CGG | - | chr8.4:63076986-63077005 | MS.gene63708:CDS | 30.0% |
| ! | TGTTGGTTATTTGGATTTGT+TGG | - | chr8.4:63076194-63076213 | MS.gene63708:intron | 30.0% |
| ! | TTTTCACTCTGCAATAAACT+TGG | + | chr8.4:63077422-63077441 | None:intergenic | 30.0% |
| !!! | AGGATTCTCAGTCTATTTTT+TGG | - | chr8.4:63077773-63077792 | MS.gene63708:intron | 30.0% |
| !!! | GGATTCTCAGTCTATTTTTT+GGG | - | chr8.4:63077774-63077793 | MS.gene63708:intron | 30.0% |
| !!! | GTTTTTGCTAGTTTGTTAGA+GGG | - | chr8.4:63076560-63076579 | MS.gene63708:intron | 30.0% |
| !!! | TGTTTTTGCTAGTTTGTTAG+AGG | - | chr8.4:63076559-63076578 | MS.gene63708:intron | 30.0% |
| !!! | TTCTGCTGTTTTTCTTTTGA+TGG | - | chr8.4:63076160-63076179 | MS.gene63708:intron | 30.0% |
| AAACCAAACTGATGTAGAAC+GGG | - | chr8.4:63078337-63078356 | MS.gene63708:intron | 35.0% | |
| AAATGGTCCTGTCACTATAT+TGG | + | chr8.4:63077051-63077070 | None:intergenic | 35.0% | |
| AACCCTCCGATCTAAATTAA+TGG | + | chr8.4:63077354-63077373 | None:intergenic | 35.0% | |
| AAGCACAAGTACTCGTAATT+CGG | + | chr8.4:63076711-63076730 | None:intergenic | 35.0% | |
| AATAGTGATACAGCAGGTAT+AGG | + | chr8.4:63078946-63078965 | None:intergenic | 35.0% | |
| ACATAAACAAAGAGTCGGTT+TGG | - | chr8.4:63078272-63078291 | MS.gene63708:intron | 35.0% | |
| ATAACCAAAGTTAGTCCAGT+TGG | - | chr8.4:63076044-63076063 | MS.gene63708:CDS | 35.0% | |
| CAAACCAAACTGATGTAGAA+CGG | - | chr8.4:63078336-63078355 | MS.gene63708:intron | 35.0% | |
| CATTTGACCAATATAGTGAC+AGG | - | chr8.4:63077041-63077060 | MS.gene63708:intron | 35.0% | |
| CTTGACTTACAATAACATGC+TGG | + | chr8.4:63078152-63078171 | None:intergenic | 35.0% | |
| GGAAAATCTAGTAAAGGCTT+TGG | - | chr8.4:63076796-63076815 | MS.gene63708:intron | 35.0% | |
| TACAATAACATACCTGCCAA+TGG | + | chr8.4:63076839-63076858 | None:intergenic | 35.0% | |
| TAGTAAGTTGTGAAGGAATC+AGG | - | chr8.4:63076529-63076548 | MS.gene63708:intron | 35.0% | |
| TATTGCAGAGTGAAAATAGG+AGG | - | chr8.4:63077426-63077445 | MS.gene63708:intron | 35.0% | |
| TATTGCTAGGATTTGTAGGT+TGG | - | chr8.4:63076597-63076616 | MS.gene63708:intron | 35.0% | |
| TATTGGTCCATCAATGTTTG+AGG | - | chr8.4:63076253-63076272 | MS.gene63708:intron | 35.0% | |
| TCTGCAATAAACTTGGGAAA+TGG | + | chr8.4:63077415-63077434 | None:intergenic | 35.0% | |
| TGGTGGTTCTTTCATCATTA+TGG | - | chr8.4:63076632-63076651 | MS.gene63708:intron | 35.0% | |
| TTAGCAGTAGTAAGTTGTGA+AGG | - | chr8.4:63076522-63076541 | MS.gene63708:intron | 35.0% | |
| TTCTATAGATGGACACAATG+AGG | - | chr8.4:63078574-63078593 | MS.gene63708:intron | 35.0% | |
| TTGCACTAAGAATGTGAAGT+AGG | - | chr8.4:63078399-63078418 | MS.gene63708:CDS | 35.0% | |
| TTGTTTGGCAACCTATGTTT+GGG | - | chr8.4:63078188-63078207 | MS.gene63708:intron | 35.0% | |
| TTTCATTACTGCAAGGAATC+TGG | + | chr8.4:63077252-63077271 | None:intergenic | 35.0% | |
| ! | AGGAGGCTATTATTTTCTTG+AGG | - | chr8.4:63077443-63077462 | MS.gene63708:intron | 35.0% |
| ! | ATATAGTGACAGGACCATTT+TGG | - | chr8.4:63077051-63077070 | MS.gene63708:intron | 35.0% |
| ! | ATGCTGTCTTGTTCTATAGA+TGG | - | chr8.4:63078563-63078582 | MS.gene63708:intron | 35.0% |
| ! | GTTCTACATCAGTTTGGTTT+GGG | + | chr8.4:63078337-63078356 | None:intergenic | 35.0% |
| ! | TAAATACCTGGTCTTCAGAT+TGG | - | chr8.4:63076972-63076991 | MS.gene63708:CDS | 35.0% |
| ! | TGAGCTATCTGTTGGTTATT+TGG | - | chr8.4:63076185-63076204 | MS.gene63708:intron | 35.0% |
| !! | AGACACTTGTTCTAGGATTA+CGG | + | chr8.4:63077534-63077553 | None:intergenic | 35.0% |
| !! | AGTTTGTTAGAGGGAAATTG+AGG | - | chr8.4:63076569-63076588 | MS.gene63708:intron | 35.0% |
| !! | ATCTGATTGACTTGTTCTAC+AGG | - | chr8.4:63077999-63078018 | MS.gene63708:CDS | 35.0% |
| !! | TCTGATTGACTTGTTCTACA+GGG | - | chr8.4:63078000-63078019 | MS.gene63708:CDS | 35.0% |
| !!! | AGTCTATTTTTTGGGAACGT+TGG | - | chr8.4:63077782-63077801 | MS.gene63708:intron | 35.0% |
| !!! | TCATGTCTTTTTTCCAGGTA+AGG | - | chr8.4:63076879-63076898 | MS.gene63708:intron | 35.0% |
| AAATGGAGAGCCTGTCATAT+TGG | - | chr8.4:63078124-63078143 | MS.gene63708:intron | 40.0% | |
| ACACTGTCAGTTCAGATTGA+AGG | + | chr8.4:63076495-63076514 | None:intergenic | 40.0% | |
| ACAGTGACGAAACCTTGTTA+TGG | + | chr8.4:63077808-63077827 | None:intergenic | 40.0% | |
| AGTACTACTACCGTTCTTTC+CGG | - | chr8.4:63077102-63077121 | MS.gene63708:intron | 40.0% | |
| ATAACAAGGTTTCGTCACTG+TGG | - | chr8.4:63077807-63077826 | MS.gene63708:intron | 40.0% | |
| ATCTCCACATTGTCAAACAG+CGG | + | chr8.4:63078050-63078069 | None:intergenic | 40.0% | |
| ATGATGAAAGAACCACCAGA+CGG | + | chr8.4:63076630-63076649 | None:intergenic | 40.0% | |
| ATGTCCCGTTACTGTGAAAA+CGG | + | chr8.4:63077923-63077942 | None:intergenic | 40.0% | |
| CACTAAGAATGTGAAGTAGG+AGG | - | chr8.4:63078402-63078421 | MS.gene63708:CDS | 40.0% | |
| CGTTCTACATCAGTTTGGTT+TGG | + | chr8.4:63078338-63078357 | None:intergenic | 40.0% | |
| GAAGACCAGGTATTTATCTG+TGG | + | chr8.4:63076968-63076987 | None:intergenic | 40.0% | |
| GCAAAGCTTAATTGAGATGC+AGG | - | chr8.4:63078424-63078443 | MS.gene63708:intron | 40.0% | |
| GGCCATTAATTTAGATCGGA+GGG | - | chr8.4:63077349-63077368 | MS.gene63708:intron | 40.0% | |
| GGTAGTAGTACTGTCACTAT+TGG | + | chr8.4:63077094-63077113 | None:intergenic | 40.0% | |
| GGTTGAGGTCAGTAATTGTT+TGG | - | chr8.4:63077370-63077389 | MS.gene63708:intron | 40.0% | |
| GTCACATTGTTGACCAAGAA+TGG | + | chr8.4:63078743-63078762 | None:intergenic | 40.0% | |
| GTCTCATAGACACTTGTTCT+AGG | + | chr8.4:63077541-63077560 | None:intergenic | 40.0% | |
| GTTGTTTGGCAACCTATGTT+TGG | - | chr8.4:63078187-63078206 | MS.gene63708:intron | 40.0% | |
| TAATTTAGATCGGAGGGTTG+AGG | - | chr8.4:63077355-63077374 | MS.gene63708:intron | 40.0% | |
| TATAGATGGACACAATGAGG+CGG | - | chr8.4:63078577-63078596 | MS.gene63708:intron | 40.0% | |
| TGTGTGCTTTCATTACTGCA+AGG | + | chr8.4:63077259-63077278 | None:intergenic | 40.0% | |
| ! | ATAGAACCATGCTTGCTACA+TGG | - | chr8.4:63078068-63078087 | MS.gene63708:intron | 40.0% |
| ! | CTATCCAAACCTTTTTGTCG+CGG | - | chr8.4:63077897-63077916 | MS.gene63708:intron | 40.0% |
| ! | GTGAATGGATTCTCTCTGAA+GGG | - | chr8.4:63076009-63076028 | MS.gene63708:CDS | 40.0% |
| !! | GACAGGACCATTTTGGAAAA+AGG | - | chr8.4:63077058-63077077 | MS.gene63708:intron | 40.0% |
| !! | GACTGAGAATCCTGTTTCTA+TGG | + | chr8.4:63077766-63077785 | None:intergenic | 40.0% |
| !! | GATGCAGGCTTAGAAGTATT+AGG | - | chr8.4:63078439-63078458 | MS.gene63708:intron | 40.0% |
| !!! | TTTTATCGCGGTTGTTTCTG+TGG | - | chr8.4:63077837-63077856 | MS.gene63708:intron | 40.0% |
| AAATCAGCGACCGGAAAGAA+CGG | + | chr8.4:63077115-63077134 | None:intergenic | 45.0% | |
| ACCAAAGTTAGTCCAGTTGG+TGG | - | chr8.4:63076047-63076066 | MS.gene63708:CDS | 45.0% | |
| ACCACCAACTGGACTAACTT+TGG | + | chr8.4:63076051-63076070 | None:intergenic | 45.0% | |
| AGATCTCCATGTAGCAAGCA+TGG | + | chr8.4:63078077-63078096 | None:intergenic | 45.0% | |
| AGGCGGAATTTGGTATGTCT+TGG | - | chr8.4:63078594-63078613 | MS.gene63708:intron | 45.0% | |
| ATCTGTATCCAGAGCCAAAG+AGG | + | chr8.4:63078982-63079001 | None:intergenic | 45.0% | |
| ATTAGGTTACCAGTTGCAGC+TGG | - | chr8.4:63077018-63077037 | MS.gene63708:intron | 45.0% | |
| CAAACTGATGTAGAACGGGT+TGG | - | chr8.4:63078341-63078360 | MS.gene63708:intron | 45.0% | |
| CAACCCGTTCTACATCAGTT+TGG | + | chr8.4:63078343-63078362 | None:intergenic | 45.0% | |
| CCAGCTATAAGCAAAGCTAG+AGG | + | chr8.4:63078477-63078496 | None:intergenic | 45.0% | |
| CGGCCATTAATTTAGATCGG+AGG | - | chr8.4:63077348-63077367 | MS.gene63708:intron | 45.0% | |
| CTGAATCCAATCTGAAGACC+AGG | + | chr8.4:63076981-63077000 | None:intergenic | 45.0% | |
| CTGTTAAGGATGTTGCGTTG+TGG | - | chr8.4:63077626-63077645 | MS.gene63708:intron | 45.0% | |
| CTTCCTTCCTAGAACAGACT+GGG | + | chr8.4:63076755-63076774 | None:intergenic | 45.0% | |
| GAGAGAATCCATTCACGAAC+CGG | + | chr8.4:63076005-63076024 | None:intergenic | 45.0% | |
| GATATTCCGGTCCCAAACAT+AGG | + | chr8.4:63078202-63078221 | None:intergenic | 45.0% | |
| GCACACCACAGATAAATACC+TGG | - | chr8.4:63076960-63076979 | MS.gene63708:CDS | 45.0% | |
| TAGGGGCTATGTATGAAACC+AGG | - | chr8.4:63076291-63076310 | MS.gene63708:intron | 45.0% | |
| TGGTCCATCAATGTTTGAGG+CGG | - | chr8.4:63076256-63076275 | MS.gene63708:intron | 45.0% | |
| TTCGACGTCGAAAACACCAT+TGG | - | chr8.4:63076820-63076839 | MS.gene63708:intron | 45.0% | |
| TTCTCAAAGCCTGGCTGTTT+AGG | + | chr8.4:63078914-63078933 | None:intergenic | 45.0% | |
| TTGATACAACCACCACCAAC+TGG | + | chr8.4:63076062-63076081 | None:intergenic | 45.0% | |
| TTTCTCACCTTGTACGGCTT+AGG | + | chr8.4:63076329-63076348 | None:intergenic | 45.0% | |
| ! | ATTTGGCGGATCTAGAGATC+AGG | - | chr8.4:63076665-63076684 | MS.gene63708:intron | 45.0% |
| ! | CATTACAACCTCTTTGGCTC+TGG | - | chr8.4:63078971-63078990 | MS.gene63708:CDS | 45.0% |
| ! | CGTGAATGGATTCTCTCTGA+AGG | - | chr8.4:63076008-63076027 | MS.gene63708:CDS | 45.0% |
| ! | TGATGGTGTGAGCTATCTGT+TGG | - | chr8.4:63076177-63076196 | MS.gene63708:intron | 45.0% |
| ! | TGTGGCGTAACGTTTTATCG+CGG | - | chr8.4:63077825-63077844 | MS.gene63708:intron | 45.0% |
| ! | TTTGGTATGTCTTGGTGTGC+TGG | - | chr8.4:63078602-63078621 | MS.gene63708:intron | 45.0% |
| ! | TTTTACGGCGAGCACAGATT+AGG | - | chr8.4:63077001-63077020 | MS.gene63708:CDS | 45.0% |
| !! | AAAGTTAGTCCAGTTGGTGG+TGG | - | chr8.4:63076050-63076069 | MS.gene63708:CDS | 45.0% |
| !! | CCTCTAGCTTTGCTTATAGC+TGG | - | chr8.4:63078474-63078493 | MS.gene63708:intron | 45.0% |
| !! | TGTTCTAGGAAGGAAGCTTG+CGG | - | chr8.4:63076759-63076778 | MS.gene63708:intron | 45.0% |
| !! | TGTTTGGTGCTGTTACTGCA+GGG | - | chr8.4:63077386-63077405 | MS.gene63708:intron | 45.0% |
| !! | TTGTTTGGTGCTGTTACTGC+AGG | - | chr8.4:63077385-63077404 | MS.gene63708:intron | 45.0% |
| !!! | TTCTTTCCGGTCGCTGATTT+TGG | - | chr8.4:63077115-63077134 | MS.gene63708:intron | 45.0% |
| AATCGCTACGACACTGATGC+TGG | - | chr8.4:63076089-63076108 | MS.gene63708:CDS | 50.0% | |
| ACAGACACAGACACAGAAGC+TGG | - | chr8.4:63076368-63076387 | MS.gene63708:intron | 50.0% | |
| ACGTCGAAAACACCATTGGC+AGG | - | chr8.4:63076824-63076843 | MS.gene63708:intron | 50.0% | |
| CAGGTAATGCCTAAACAGCC+AGG | - | chr8.4:63078902-63078921 | MS.gene63708:intron | 50.0% | |
| CATGCTGGGTCCAATATGAC+AGG | + | chr8.4:63078137-63078156 | None:intergenic | 50.0% | |
| CGATTGCGACCGCTATTTGA+AGG | + | chr8.4:63077583-63077602 | None:intergenic | 50.0% | |
| CTGGCTGTTTAGGCATTACC+TGG | + | chr8.4:63078904-63078923 | None:intergenic | 50.0% | |
| CTTGCGGAAATGCACAAGTC+TGG | - | chr8.4:63076775-63076794 | MS.gene63708:intron | 50.0% | |
| CTTGCTTCCCAGTCTGTTCT+AGG | - | chr8.4:63076745-63076764 | MS.gene63708:intron | 50.0% | |
| GCTTCCTTCCTAGAACAGAC+TGG | + | chr8.4:63076756-63076775 | None:intergenic | 50.0% | |
| GGACACAATGAGGCGGAATT+TGG | - | chr8.4:63078584-63078603 | MS.gene63708:intron | 50.0% | |
| GTATGGCCAAAATCAGCGAC+CGG | + | chr8.4:63077124-63077143 | None:intergenic | 50.0% | |
| TAGCGGTCGCAATCGTGTTA+AGG | - | chr8.4:63077588-63077607 | MS.gene63708:intron | 50.0% | |
| TCTCTCCTCTTCTCAAAGCC+TGG | + | chr8.4:63078923-63078942 | None:intergenic | 50.0% | |
| TGAAAACGGCCGCGACAAAA+AGG | + | chr8.4:63077909-63077928 | None:intergenic | 50.0% | |
| TGCACCGCTGTTTGACAATG+TGG | - | chr8.4:63078043-63078062 | MS.gene63708:CDS | 50.0% | |
| TGGGAACGTTGGCCATAACA+AGG | - | chr8.4:63077793-63077812 | MS.gene63708:intron | 50.0% | |
| TTGTTCTACAGGGCAGAGAC+TGG | - | chr8.4:63078010-63078029 | MS.gene63708:CDS | 50.0% | |
| ! | CTACATGGAGATCTCTGGAG+CGG | - | chr8.4:63078083-63078102 | MS.gene63708:intron | 50.0% |
| ! | GCTTGCTACATGGAGATCTC+TGG | - | chr8.4:63078078-63078097 | MS.gene63708:intron | 50.0% |
| ! | GGATGTTGCGTTGTGGATTG+TGG | - | chr8.4:63077633-63077652 | MS.gene63708:intron | 50.0% |
| ! | GTAAGGATCCGGTTCGTGAA+TGG | - | chr8.4:63075994-63076013 | MS.gene63708:CDS | 50.0% |
| ! | TCCATCAATGTTTGAGGCGG+AGG | - | chr8.4:63076259-63076278 | MS.gene63708:intron | 50.0% |
| ! | TGGCAACCTATGTTTGGGAC+CGG | - | chr8.4:63078193-63078212 | MS.gene63708:intron | 50.0% |
| !! | AACAGCCAGGCTTTGAGAAG+AGG | - | chr8.4:63078915-63078934 | MS.gene63708:CDS | 50.0% |
| !! | ATGTCTTGGTGTGCTGGCTT+TGG | - | chr8.4:63078608-63078627 | MS.gene63708:intron | 50.0% |
| !! | CGCGGTTGTTTCTGTGGTTT+AGG | - | chr8.4:63077843-63077862 | MS.gene63708:intron | 50.0% |
| !! | CTTCCCAGTCTGTTCTAGGA+AGG | - | chr8.4:63076749-63076768 | MS.gene63708:intron | 50.0% |
| !! | GTTCTAGGATTACGGCACCA+AGG | + | chr8.4:63077526-63077545 | None:intergenic | 50.0% |
| ACGGCCGCGACAAAAAGGTT+TGG | + | chr8.4:63077904-63077923 | None:intergenic | 55.0% | |
| AGGCGGAGGCTCTTGGTTTA+GGG | - | chr8.4:63076273-63076292 | MS.gene63708:intron | 55.0% | |
| CCTTGTACGGCTTAGGCACA+CGG | + | chr8.4:63076322-63076341 | None:intergenic | 55.0% | |
| GCCTCCGCCTCAAACATTGA+TGG | + | chr8.4:63076263-63076282 | None:intergenic | 55.0% | |
| GGTCAAATGCCAGCTGCAAC+TGG | + | chr8.4:63077030-63077049 | None:intergenic | 55.0% | |
| TTCTACAGGGCAGAGACTGG+TGG | - | chr8.4:63078013-63078032 | MS.gene63708:CDS | 55.0% | |
| ! | ATGTTTGAGGCGGAGGCTCT+TGG | - | chr8.4:63076266-63076285 | MS.gene63708:intron | 55.0% |
| ! | TAGGTTGGATCGCTACCGTC+TGG | - | chr8.4:63076612-63076631 | MS.gene63708:intron | 55.0% |
| !! | CGCGGCCGTTTTCACAGTAA+CGG | - | chr8.4:63077915-63077934 | MS.gene63708:intron | 55.0% |
| !! | GCGGCCGTTTTCACAGTAAC+GGG | - | chr8.4:63077916-63077935 | MS.gene63708:intron | 55.0% |
| !! | TCTTGGTGTGCTGGCTTTGG+AGG | - | chr8.4:63078611-63078630 | MS.gene63708:intron | 55.0% |
| CCGTGTGCCTAAGCCGTACA+AGG | - | chr8.4:63076319-63076338 | MS.gene63708:intron | 60.0% | |
| CTTAGGCACACGGATGGTCC+TGG | + | chr8.4:63076312-63076331 | None:intergenic | 60.0% | |
| GAGGCGGAGGCTCTTGGTTT+AGG | - | chr8.4:63076272-63076291 | MS.gene63708:intron | 60.0% | |
| GGCGGAGGCTCTTGGTTTAG+GGG | - | chr8.4:63076274-63076293 | MS.gene63708:intron | 60.0% | |
| GTACGGCTTAGGCACACGGA+TGG | + | chr8.4:63076318-63076337 | None:intergenic | 60.0% | |
| GTTGGATCGCTACCGTCTGG+TGG | - | chr8.4:63076615-63076634 | MS.gene63708:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 63075990 | 63079051 | 63075990 | ID=MS.gene63708 |
| chr8.4 | mRNA | 63075990 | 63079051 | 63075990 | ID=MS.gene63708.t1;Parent=MS.gene63708 |
| chr8.4 | exon | 63078906 | 63079051 | 63078906 | ID=MS.gene63708.t1.exon1;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63078906 | 63079051 | 63078906 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63078701 | 63078791 | 63078701 | ID=MS.gene63708.t1.exon2;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63078701 | 63078791 | 63078701 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63078355 | 63078426 | 63078355 | ID=MS.gene63708.t1.exon3;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63078355 | 63078426 | 63078355 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63078196 | 63078284 | 63078196 | ID=MS.gene63708.t1.exon4;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63078196 | 63078284 | 63078196 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63077962 | 63078080 | 63077962 | ID=MS.gene63708.t1.exon5;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63077962 | 63078080 | 63077962 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63076880 | 63077020 | 63076880 | ID=MS.gene63708.t1.exon6;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63076880 | 63077020 | 63076880 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63076383 | 63076459 | 63076383 | ID=MS.gene63708.t1.exon7;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63076383 | 63076459 | 63076383 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| chr8.4 | exon | 63075990 | 63076136 | 63075990 | ID=MS.gene63708.t1.exon8;Parent=MS.gene63708.t1 |
| chr8.4 | CDS | 63075990 | 63076136 | 63075990 | ID=cds.MS.gene63708.t1;Parent=MS.gene63708.t1 |
| Gene Sequence |
| Protein sequence |
