Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87977.t1 | XP_003619012.1 | 95.1 | 387 | 17 | 2 | 1 | 386 | 1 | 386 | 5.80E-210 | 740 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87977.t1 | Q9C503 | 43.0 | 372 | 166 | 8 | 19 | 385 | 23 | 353 | 1.8e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87977.t1 | G7KQ57 | 95.1 | 387 | 17 | 2 | 1 | 386 | 1 | 386 | 4.2e-210 | 740.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene87977 | 0.871295 | 7.62E-67 | -1.69E-46 |
| MS.gene049171 | MS.gene87977 | 0.884375 | 2.02E-71 | -1.69E-46 |
| MS.gene049217 | MS.gene87977 | 0.870266 | 1.66E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene87977 | 0.876123 | 1.79E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene87977 | 0.883637 | 3.79E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene87977 | 0.871368 | 7.21E-67 | -1.69E-46 |
| MS.gene049427 | MS.gene87977 | 0.83931 | 1.71E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene87977 | 0.893321 | 7.01E-75 | -1.69E-46 |
| MS.gene049627 | MS.gene87977 | 0.808231 | 3.43E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene87977 | 0.866677 | 2.39E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene87977 | 0.849937 | 2.35E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene87977 | 0.822595 | 2.18E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene87977 | 0.849919 | 2.37E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene87977 | 0.835132 | 2.00E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene87977 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene87977 | 0.82076 | 5.79E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene87977 | 0.829661 | 4.54E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene87977 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene87977 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene87977 | 0.853264 | 2.68E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene87977 | 0.852201 | 5.39E-61 | -1.69E-46 |
| MS.gene050538 | MS.gene87977 | 0.874485 | 6.51E-68 | -1.69E-46 |
| MS.gene050547 | MS.gene87977 | -0.815824 | 7.58E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene87977 | 0.864105 | 1.54E-64 | -1.69E-46 |
| MS.gene050593 | MS.gene87977 | 0.879919 | 8.41E-70 | -1.69E-46 |
| MS.gene050612 | MS.gene87977 | 0.86094 | 1.45E-63 | -1.69E-46 |
| MS.gene050647 | MS.gene87977 | -0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene87977 | 0.813085 | 3.06E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene87977 | 0.848853 | 4.70E-60 | -1.69E-46 |
| MS.gene050690 | MS.gene87977 | 0.818198 | 2.22E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene87977 | 0.893477 | 6.06E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene87977 | 0.875472 | 3.00E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene87977 | 0.89702 | 2.11E-76 | -1.69E-46 |
| MS.gene050781 | MS.gene87977 | 0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene87977 | 0.851529 | 8.36E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene87977 | 0.866163 | 3.48E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene87977 | 0.816975 | 4.19E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene87977 | 0.814568 | 1.44E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene87977 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene87977 | 0.879167 | 1.55E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene87977 | 0.835468 | 1.65E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene87977 | 0.82076 | 5.79E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene87977 | 0.827077 | 1.91E-54 | -1.69E-46 |
| MS.gene051167 | MS.gene87977 | -0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene87977 | 0.841404 | 4.85E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene87977 | 0.852701 | 3.88E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene87977 | 0.81808 | 2.36E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene87977 | 0.866162 | 3.49E-65 | -1.69E-46 |
| MS.gene051694 | MS.gene87977 | 0.855427 | 6.36E-62 | -1.69E-46 |
| MS.gene051810 | MS.gene87977 | 0.833111 | 6.44E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene87977 | 0.87471 | 5.46E-68 | -1.69E-46 |
| MS.gene051858 | MS.gene87977 | 0.867487 | 1.32E-65 | -1.69E-46 |
| MS.gene052015 | MS.gene87977 | -0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene87977 | 0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene87977 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene87977 | 0.848336 | 6.54E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene87977 | 0.816681 | 4.88E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene87977 | 0.836656 | 8.24E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene87977 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene87977 | 0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene87977 | 0.837876 | 4.01E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene87977 | 0.864628 | 1.06E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene87977 | 0.877257 | 7.26E-69 | -1.69E-46 |
| MS.gene052505 | MS.gene87977 | 0.868606 | 5.76E-66 | -1.69E-46 |
| MS.gene052506 | MS.gene87977 | 0.846286 | 2.39E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene87977 | 0.876044 | 1.91E-68 | -1.69E-46 |
| MS.gene052820 | MS.gene87977 | 0.814673 | 1.37E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene87977 | 0.840004 | 1.13E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene87977 | 0.872653 | 2.69E-67 | -1.69E-46 |
| MS.gene052825 | MS.gene87977 | 0.872563 | 2.89E-67 | -1.69E-46 |
| MS.gene052870 | MS.gene87977 | 0.851186 | 1.05E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene87977 | 0.859387 | 4.29E-63 | -1.69E-46 |
| MS.gene052966 | MS.gene87977 | 0.811482 | 6.85E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene87977 | 0.810829 | 9.49E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene87977 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene87977 | 0.843526 | 1.33E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene87977 | 0.874734 | 5.36E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene87977 | 0.866992 | 1.90E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene87977 | 0.892964 | 9.76E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene87977 | 0.887358 | 1.53E-72 | -1.69E-46 |
| MS.gene053322 | MS.gene87977 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene053421 | MS.gene87977 | -0.814406 | 1.57E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene87977 | 0.843465 | 1.38E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene87977 | 0.865579 | 5.33E-65 | -1.69E-46 |
| MS.gene053480 | MS.gene87977 | 0.851695 | 7.51E-61 | -1.69E-46 |
| MS.gene053574 | MS.gene87977 | 0.861507 | 9.78E-64 | -1.69E-46 |
| MS.gene053579 | MS.gene87977 | 0.856017 | 4.27E-62 | -1.69E-46 |
| MS.gene053632 | MS.gene87977 | 0.857251 | 1.85E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene87977 | 0.860474 | 2.01E-63 | -1.69E-46 |
| MS.gene053915 | MS.gene87977 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene87977 | 0.813005 | 3.19E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene87977 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene87977 | 0.842075 | 3.23E-58 | -1.69E-46 |
| MS.gene054595 | MS.gene87977 | 0.838869 | 2.23E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene87977 | 0.861365 | 1.08E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene87977 | 0.881827 | 1.74E-70 | -1.69E-46 |
| MS.gene054706 | MS.gene87977 | -0.837551 | 4.86E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene87977 | 0.85022 | 1.95E-60 | -1.69E-46 |
| MS.gene054884 | MS.gene87977 | -0.856109 | 4.02E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene87977 | 0.848759 | 4.99E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene87977 | 0.853706 | 2.00E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene87977 | 0.825065 | 5.74E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene87977 | -0.818858 | 1.57E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene87977 | 0.899377 | 2.10E-77 | -1.69E-46 |
| MS.gene055224 | MS.gene87977 | 0.832084 | 1.16E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene87977 | 0.869085 | 4.03E-66 | -1.69E-46 |
| MS.gene055362 | MS.gene87977 | 0.873055 | 1.98E-67 | -1.69E-46 |
| MS.gene055370 | MS.gene87977 | 0.840699 | 7.43E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene87977 | 0.889575 | 2.14E-73 | -1.69E-46 |
| MS.gene055536 | MS.gene87977 | -0.811753 | 5.98E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene87977 | 0.885441 | 8.11E-72 | -1.69E-46 |
| MS.gene055647 | MS.gene87977 | 0.830196 | 3.36E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene87977 | 0.849493 | 3.12E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene87977 | 0.821004 | 5.08E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene87977 | 0.801684 | 8.02E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene87977 | 0.807252 | 5.54E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene87977 | 0.83976 | 1.31E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene87977 | 0.820567 | 6.41E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene87977 | 0.863057 | 3.27E-64 | -1.69E-46 |
| MS.gene055956 | MS.gene87977 | -0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene87977 | 0.800993 | 1.11E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene87977 | 0.838149 | 3.41E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene87977 | 0.847519 | 1.10E-59 | -1.69E-46 |
| MS.gene056487 | MS.gene87977 | 0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene87977 | 0.846757 | 1.78E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene87977 | 0.835361 | 1.75E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene87977 | 0.816129 | 6.48E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene87977 | 0.802819 | 4.68E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene87977 | -0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene87977 | 0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene87977 | 0.873359 | 1.56E-67 | -1.69E-46 |
| MS.gene056692 | MS.gene87977 | 0.867045 | 1.83E-65 | -1.69E-46 |
| MS.gene056796 | MS.gene87977 | 0.802392 | 5.73E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene87977 | 0.839944 | 1.17E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene87977 | 0.820138 | 8.03E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene87977 | 0.839988 | 1.14E-57 | -1.69E-46 |
| MS.gene057048 | MS.gene87977 | 0.819745 | 9.88E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene87977 | 0.844963 | 5.46E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene87977 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene87977 | 0.832146 | 1.12E-55 | -1.69E-46 |
| MS.gene057196 | MS.gene87977 | 0.879393 | 1.29E-69 | -1.69E-46 |
| MS.gene057261 | MS.gene87977 | -0.822846 | 1.90E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene87977 | 0.866246 | 3.28E-65 | -1.69E-46 |
| MS.gene057332 | MS.gene87977 | 0.868663 | 5.52E-66 | -1.69E-46 |
| MS.gene057416 | MS.gene87977 | 0.886726 | 2.66E-72 | -1.69E-46 |
| MS.gene057658 | MS.gene87977 | 0.891117 | 5.32E-74 | -1.69E-46 |
| MS.gene057831 | MS.gene87977 | 0.871002 | 9.52E-67 | -1.69E-46 |
| MS.gene057856 | MS.gene87977 | 0.823898 | 1.08E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene87977 | 0.860073 | 2.66E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene87977 | 0.811125 | 8.18E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene87977 | 0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene87977 | -0.80521 | 1.49E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene87977 | 0.851353 | 9.38E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene87977 | 0.883931 | 2.95E-71 | -1.69E-46 |
| MS.gene058419 | MS.gene87977 | 0.903006 | 5.42E-79 | -1.69E-46 |
| MS.gene058544 | MS.gene87977 | 0.900985 | 4.23E-78 | -1.69E-46 |
| MS.gene058723 | MS.gene87977 | 0.831823 | 1.34E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene87977 | 0.852593 | 4.17E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene87977 | 0.890544 | 8.95E-74 | -1.69E-46 |
| MS.gene05883 | MS.gene87977 | 0.875168 | 3.81E-68 | -1.69E-46 |
| MS.gene059022 | MS.gene87977 | 0.851804 | 6.99E-61 | -1.69E-46 |
| MS.gene059023 | MS.gene87977 | 0.907356 | 5.54E-81 | -1.69E-46 |
| MS.gene059029 | MS.gene87977 | 0.836094 | 1.14E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene87977 | 0.807768 | 4.30E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene87977 | 0.871177 | 8.34E-67 | -1.69E-46 |
| MS.gene059181 | MS.gene87977 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene87977 | 0.889204 | 2.99E-73 | -1.69E-46 |
| MS.gene059512 | MS.gene87977 | 0.804245 | 2.37E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene87977 | 0.849068 | 4.10E-60 | -1.69E-46 |
| MS.gene059667 | MS.gene87977 | 0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene87977 | 0.889834 | 1.70E-73 | -1.69E-46 |
| MS.gene059718 | MS.gene87977 | 0.8804 | 5.66E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene87977 | 0.883643 | 3.77E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene87977 | 0.828263 | 9.91E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene87977 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene87977 | 0.863071 | 3.23E-64 | -1.69E-46 |
| MS.gene059955 | MS.gene87977 | -0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene87977 | 0.84356 | 1.30E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene87977 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene87977 | 0.811263 | 7.64E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene87977 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene87977 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene87977 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene87977 | 0.854193 | 1.45E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene87977 | 0.868795 | 5.01E-66 | -1.69E-46 |
| MS.gene060804 | MS.gene87977 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene87977 | 0.865363 | 6.23E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene87977 | 0.908654 | 1.35E-81 | -1.69E-46 |
| MS.gene060982 | MS.gene87977 | 0.848202 | 7.12E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene87977 | 0.887205 | 1.75E-72 | -1.69E-46 |
| MS.gene061200 | MS.gene87977 | 0.821667 | 3.57E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87977.t1 | MTR_6g032880 | 95.090 | 387 | 17 | 2 | 1 | 386 | 1 | 386 | 0.0 | 752 |
| MS.gene87977.t1 | MTR_7g085490 | 24.926 | 337 | 228 | 7 | 60 | 386 | 33 | 354 | 1.26e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87977.t1 | AT1G55370 | 44.144 | 333 | 145 | 6 | 55 | 385 | 60 | 353 | 1.23e-82 | 256 |
| MS.gene87977.t1 | AT1G55370 | 40.892 | 269 | 119 | 5 | 55 | 321 | 60 | 290 | 2.90e-52 | 176 |
| MS.gene87977.t1 | AT1G64770 | 25.073 | 343 | 228 | 9 | 53 | 386 | 26 | 348 | 2.49e-18 | 85.9 |
Find 77 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCATGATATTATATATT+TGG | 0.114257 | 6.1:-11324523 | None:intergenic |
| TTTCATGGTCTCCTTCTAAT+TGG | 0.239884 | 6.1:+11322931 | MS.gene87977:CDS |
| TGGATTGATTACTTCTTATA+AGG | 0.259146 | 6.1:+11322773 | MS.gene87977:CDS |
| TAAGGTACTGAAGCTACTTT+TGG | 0.272432 | 6.1:-11322618 | None:intergenic |
| TTCTCCTCTTCGCTCGTATT+CGG | 0.290229 | 6.1:-11323824 | None:intergenic |
| AGAAAGGATTTGGAAATATA+TGG | 0.300634 | 6.1:+11323843 | MS.gene87977:CDS |
| TCAGTATTAGTTGGAAGAAA+TGG | 0.309706 | 6.1:+11324349 | MS.gene87977:CDS |
| TGTTGAATATAGCTAGAAAA+TGG | 0.311886 | 6.1:-11322567 | None:intergenic |
| CCTATTGCATAAGTTGCTTC+TGG | 0.319165 | 6.1:-11323740 | None:intergenic |
| CAATTCTGAGGAATCTATTC+AGG | 0.346682 | 6.1:+11322974 | MS.gene87977:CDS |
| GCAGTGTCAGAAGGAGAATT+TGG | 0.352287 | 6.1:+11322837 | MS.gene87977:CDS |
| TATATTTGGATTGTGTAGAT+AGG | 0.365670 | 6.1:-11324509 | None:intergenic |
| AGCGAAGAGGAGAAAGGATT+TGG | 0.367639 | 6.1:+11323833 | MS.gene87977:CDS |
| TGGAAGTTGTATGGCCAAAA+TGG | 0.369055 | 6.1:+11322710 | MS.gene87977:CDS |
| TTCATGGTCTCCTTCTAATT+GGG | 0.370031 | 6.1:+11322932 | MS.gene87977:CDS |
| TCTTGTGGACTTAATACAAT+TGG | 0.384976 | 6.1:-11324469 | None:intergenic |
| TTTAATCCAATCTTGTCATA+TGG | 0.386445 | 6.1:-11323602 | None:intergenic |
| TGAAGATAGTGGTGAGGAAA+TGG | 0.390876 | 6.1:+11323934 | MS.gene87977:CDS |
| GGTGTGTTTCTAGTAGATTT+TGG | 0.405033 | 6.1:-11322525 | None:intergenic |
| GTGTAAACTCTCTCTTGTAT+TGG | 0.410082 | 6.1:-11322593 | None:intergenic |
| AAAATAAACTCCGATTCAAT+AGG | 0.413697 | 6.1:-11323794 | None:intergenic |
| CCAGAAGCAACTTATGCAAT+AGG | 0.428313 | 6.1:+11323740 | MS.gene87977:CDS |
| TCTAAGTAGTCATAGTTGAT+TGG | 0.433432 | 6.1:-11322645 | None:intergenic |
| CTGTTCAGTCCAGGCTCATC+AGG | 0.435338 | 6.1:+11324388 | MS.gene87977:CDS |
| TTATGCAAAACCCAATTAGA+AGG | 0.440628 | 6.1:-11322942 | None:intergenic |
| TGATTATCTGTTCCCCAACT+TGG | 0.446166 | 6.1:-11323890 | None:intergenic |
| TTTGGTGATGCTGTTATTCA+AGG | 0.448112 | 6.1:+11322855 | MS.gene87977:CDS |
| TATTAAGTCCACAAGATGTA+TGG | 0.449867 | 6.1:+11324476 | MS.gene87977:CDS |
| GAAGCTTTACACTCATTGAC+AGG | 0.450398 | 6.1:+11324011 | MS.gene87977:CDS |
| GCAGAAGATAGTGAAGATAG+TGG | 0.458702 | 6.1:+11323923 | MS.gene87977:CDS |
| AAAGGACCATATGACAAGAT+TGG | 0.464962 | 6.1:+11323596 | MS.gene87977:CDS |
| AGAAGAAACTCAGTATTAGT+TGG | 0.473799 | 6.1:+11324340 | MS.gene87977:CDS |
| CCTCCTTTCCATACATCTTG+TGG | 0.476094 | 6.1:-11324484 | None:intergenic |
| CTGATGAGCCTGGACTGAAC+AGG | 0.479462 | 6.1:-11324387 | None:intergenic |
| AAAATGATGATGAAGTTTCA+TGG | 0.482731 | 6.1:+11322916 | MS.gene87977:CDS |
| GGAGTCACATTTGAAGAAGT+TGG | 0.501672 | 6.1:+11322687 | MS.gene87977:CDS |
| CTTTCAATTCCTGATGAGCC+TGG | 0.508570 | 6.1:-11324397 | None:intergenic |
| AGAAGTTGGTGGAAGTTGTA+TGG | 0.511764 | 6.1:+11322701 | MS.gene87977:CDS |
| GTGGACTTAATACAATTGGT+TGG | 0.512217 | 6.1:-11324465 | None:intergenic |
| TAGCCGACCGCCTATTGAAT+CGG | 0.513659 | 6.1:+11323784 | MS.gene87977:CDS |
| TCAATGAGTGTAAAGCTTCG+AGG | 0.514142 | 6.1:-11324007 | None:intergenic |
| ATTAAAATACATTGTGACAT+TGG | 0.516339 | 6.1:+11323619 | MS.gene87977:CDS |
| TACTGTCAAATGACTAAGGA+TGG | 0.517706 | 6.1:-11323711 | None:intergenic |
| TCATAGTTGATTGGTTGGTA+AGG | 0.520007 | 6.1:-11322636 | None:intergenic |
| AATACGAGCGAAGAGGAGAA+AGG | 0.520545 | 6.1:+11323827 | MS.gene87977:CDS |
| TCTTTGCCACTTCAAATGAC+AGG | 0.523333 | 6.1:+11323686 | MS.gene87977:CDS |
| AGTAGTCATAGTTGATTGGT+TGG | 0.527301 | 6.1:-11322641 | None:intergenic |
| ATTGTGACATTGGAAGAAGA+TGG | 0.536047 | 6.1:+11323629 | MS.gene87977:CDS |
| TACTTAGAACAAGAATTCAA+TGG | 0.537821 | 6.1:+11322660 | MS.gene87977:CDS |
| TGCTTACTGTCAAATGACTA+AGG | 0.541257 | 6.1:-11323715 | None:intergenic |
| GGTAAACAAATATGTGATGA+TGG | 0.544469 | 6.1:-11322546 | None:intergenic |
| ACATTGGAAGAAGATGGATT+AGG | 0.545100 | 6.1:+11323635 | MS.gene87977:CDS |
| GAAACATACCTGTTCAGTCC+AGG | 0.552112 | 6.1:+11324379 | MS.gene87977:CDS |
| AGATAGTGAAGATAGTGGTG+AGG | 0.563650 | 6.1:+11323928 | MS.gene87977:CDS |
| TCCTCTTCGCTCGTATTCGG+AGG | 0.567150 | 6.1:-11323821 | None:intergenic |
| CTTAATACTGCAGTGTCAGA+AGG | 0.569822 | 6.1:+11322828 | MS.gene87977:CDS |
| GACTTAATACAATTGGTTGG+AGG | 0.576448 | 6.1:-11324462 | None:intergenic |
| GTCACATTTGAAGAAGTTGG+TGG | 0.580862 | 6.1:+11322690 | MS.gene87977:CDS |
| ATGGAACCTGTCATTTGAAG+TGG | 0.582698 | 6.1:-11323692 | None:intergenic |
| AAGTTTGCATACATATGTGT+TGG | 0.588220 | 6.1:+11324427 | MS.gene87977:CDS |
| GAACAAGAATTCAATGGACA+TGG | 0.592739 | 6.1:+11322666 | MS.gene87977:CDS |
| CAATCCACTTGGTAGCAACA+TGG | 0.606969 | 6.1:-11322757 | None:intergenic |
| GCTACCATGTTGCTACCAAG+TGG | 0.611640 | 6.1:+11322753 | MS.gene87977:CDS |
| TGTCATTTGAAGTGGCAAAG+AGG | 0.615397 | 6.1:-11323684 | None:intergenic |
| AGTCCACAAGATGTATGGAA+AGG | 0.619952 | 6.1:+11324481 | MS.gene87977:CDS |
| CAGGTAGTATTAATAAACAA+AGG | 0.628059 | 6.1:+11323578 | MS.gene87977:intron |
| CTTCTTATAAGGCACCTATG+TGG | 0.628349 | 6.1:+11322784 | MS.gene87977:CDS |
| TATAAGGCACCTATGTGGCA+TGG | 0.628930 | 6.1:+11322789 | MS.gene87977:CDS |
| CCACAAGATGTATGGAAAGG+AGG | 0.629918 | 6.1:+11324484 | MS.gene87977:CDS |
| GGTGATGCTGTTATTCAAGG+AGG | 0.632525 | 6.1:+11322858 | MS.gene87977:CDS |
| TAATATTAAAGGCAATTCTG+AGG | 0.647761 | 6.1:+11322962 | MS.gene87977:CDS |
| ATAAACTCCGATTCAATAGG+CGG | 0.659158 | 6.1:-11323791 | None:intergenic |
| TAAGAAGTAATCAATCCACT+TGG | 0.665933 | 6.1:-11322768 | None:intergenic |
| AAGGCACCTATGTGGCATGG+TGG | 0.667629 | 6.1:+11322792 | MS.gene87977:CDS |
| ACTCCGATTCAATAGGCGGT+CGG | 0.667753 | 6.1:-11323787 | None:intergenic |
| TCCTCCGAATACGAGCGAAG+AGG | 0.673403 | 6.1:+11323820 | MS.gene87977:CDS |
| AAGCTTTACACTCATTGACA+GGG | 0.676259 | 6.1:+11324012 | MS.gene87977:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTTTTTTTAATCA+GGG | + | chr6.1:11324316-11324335 | MS.gene87977:intron | 10.0% |
| !! | ATAAGATTAAAATAAAGTCA+AGG | + | chr6.1:11324130-11324149 | MS.gene87977:intron | 15.0% |
| !! | ATTAATTAAAGTTGTATTGA+TGG | + | chr6.1:11323413-11323432 | MS.gene87977:intron | 15.0% |
| !! | TAAGATTAAAATAAAGTCAA+GGG | + | chr6.1:11324131-11324150 | MS.gene87977:intron | 15.0% |
| !!! | GGTTTTTTTTTTTTTTAATC+AGG | + | chr6.1:11324315-11324334 | MS.gene87977:intron | 15.0% |
| !! | AAAATGATTATTTACTCGTT+TGG | + | chr6.1:11324294-11324313 | MS.gene87977:intron | 20.0% |
| !! | ATTAAAATACATTGTGACAT+TGG | + | chr6.1:11323619-11323638 | MS.gene87977:CDS | 20.0% |
| !! | CTGTTTAATGGTTATTATTA+GGG | + | chr6.1:11322998-11323017 | MS.gene87977:intron | 20.0% |
| !! | TATCATTAAATCTATTGTTG+AGG | - | chr6.1:11324052-11324071 | None:intergenic | 20.0% |
| !! | TCTGTTTAATGGTTATTATT+AGG | + | chr6.1:11322997-11323016 | MS.gene87977:intron | 20.0% |
| !!! | AGATTTTGGTATGAAAATAT+TGG | - | chr6.1:11322514-11322533 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGATCAATGAA+GGG | + | chr6.1:11324237-11324256 | MS.gene87977:intron | 20.0% |
| ! | AAAATAAACTCCGATTCAAT+AGG | - | chr6.1:11323797-11323816 | None:intergenic | 25.0% |
| ! | AAATTGTGCGAAAAATCATA+AGG | - | chr6.1:11323514-11323533 | None:intergenic | 25.0% |
| ! | AGAAAGGATTTGGAAATATA+TGG | + | chr6.1:11323843-11323862 | MS.gene87977:CDS | 25.0% |
| ! | AGAGTTATTGTGAGTATTTA+AGG | + | chr6.1:11323225-11323244 | MS.gene87977:intron | 25.0% |
| ! | ATAAACTTGCACATATACTT+GGG | + | chr6.1:11324069-11324088 | MS.gene87977:intron | 25.0% |
| ! | ATAAAGTCAAGGGAATATAA+CGG | + | chr6.1:11324141-11324160 | MS.gene87977:intron | 25.0% |
| ! | CAGGTAGTATTAATAAACAA+AGG | + | chr6.1:11323578-11323597 | MS.gene87977:intron | 25.0% |
| ! | CCAACCAAAATAATAATAAG+GGG | - | chr6.1:11323377-11323396 | None:intergenic | 25.0% |
| ! | GCCAACCAAAATAATAATAA+GGG | - | chr6.1:11323378-11323397 | None:intergenic | 25.0% |
| ! | TAAAGCTGTTTGTTCATAAA+TGG | - | chr6.1:11324095-11324114 | None:intergenic | 25.0% |
| ! | TAATATTAAAGGCAATTCTG+AGG | + | chr6.1:11322962-11322981 | MS.gene87977:CDS | 25.0% |
| ! | TACTTAGAACAAGAATTCAA+TGG | + | chr6.1:11322660-11322679 | MS.gene87977:CDS | 25.0% |
| ! | TATATTTGGATTGTGTAGAT+AGG | - | chr6.1:11324512-11324531 | None:intergenic | 25.0% |
| ! | TCACAATAACTCTTCATATA+GGG | - | chr6.1:11323218-11323237 | None:intergenic | 25.0% |
| ! | TGCCAACCAAAATAATAATA+AGG | - | chr6.1:11323379-11323398 | None:intergenic | 25.0% |
| ! | TGGATTGATTACTTCTTATA+AGG | + | chr6.1:11322773-11322792 | MS.gene87977:CDS | 25.0% |
| ! | TGTTGAATATAGCTAGAAAA+TGG | - | chr6.1:11322570-11322589 | None:intergenic | 25.0% |
| ! | TTGAAATTTCGATACAATGA+GGG | - | chr6.1:11323055-11323074 | None:intergenic | 25.0% |
| ! | TTTAATCCAATCTTGTCATA+TGG | - | chr6.1:11323605-11323624 | None:intergenic | 25.0% |
| !! | AAAATGATGATGAAGTTTCA+TGG | + | chr6.1:11322916-11322935 | MS.gene87977:CDS | 25.0% |
| !! | ATTGCCCCTTATTATTATTT+TGG | + | chr6.1:11323370-11323389 | MS.gene87977:intron | 25.0% |
| !! | TGGGTTTTGCATAATATTAA+AGG | + | chr6.1:11322951-11322970 | MS.gene87977:CDS | 25.0% |
| !! | TTTGAAATTTCGATACAATG+AGG | - | chr6.1:11323056-11323075 | None:intergenic | 25.0% |
| !!! | ATTATTATTTTGGTTGGCAA+AGG | + | chr6.1:11323380-11323399 | MS.gene87977:intron | 25.0% |
| !!! | CTTGTAATTTTGATCAATGA+AGG | + | chr6.1:11324236-11324255 | MS.gene87977:intron | 25.0% |
| !!! | TAAGAATTTTGATGCATTGA+GGG | + | chr6.1:11323304-11323323 | MS.gene87977:intron | 25.0% |
| !!! | TCCATTTTTCAATTCCATTT+TGG | - | chr6.1:11322727-11322746 | None:intergenic | 25.0% |
| !!! | TTAAGAATTTTGATGCATTG+AGG | + | chr6.1:11323303-11323322 | MS.gene87977:intron | 25.0% |
| !!! | TTTAAGGATTATTTTAGCGT+CGG | + | chr6.1:11323241-11323260 | MS.gene87977:intron | 25.0% |
| AAGTTTGCATACATATGTGT+TGG | + | chr6.1:11324427-11324446 | MS.gene87977:CDS | 30.0% | |
| ACAATACGTAAGTATACTGA+AGG | - | chr6.1:11323156-11323175 | None:intergenic | 30.0% | |
| ACCTGCATAAGATATATTCA+AGG | - | chr6.1:11323563-11323582 | None:intergenic | 30.0% | |
| ACCTTGAATATATCTTATGC+AGG | + | chr6.1:11323559-11323578 | MS.gene87977:intron | 30.0% | |
| AGAAGAAACTCAGTATTAGT+TGG | + | chr6.1:11324340-11324359 | MS.gene87977:CDS | 30.0% | |
| ATCTATTCAGGTCTGTTTAA+TGG | + | chr6.1:11322986-11323005 | MS.gene87977:intron | 30.0% | |
| CTCACAATAACTCTTCATAT+AGG | - | chr6.1:11323219-11323238 | None:intergenic | 30.0% | |
| GATAAACTTGCACATATACT+TGG | + | chr6.1:11324068-11324087 | MS.gene87977:intron | 30.0% | |
| GCCAAAATGGAATTGAAAAA+TGG | + | chr6.1:11322723-11322742 | MS.gene87977:CDS | 30.0% | |
| GGTAAACAAATATGTGATGA+TGG | - | chr6.1:11322549-11322568 | None:intergenic | 30.0% | |
| GTATTGTCATATTAGTCCTT+CGG | + | chr6.1:11323169-11323188 | MS.gene87977:intron | 30.0% | |
| TAAGAAGTAATCAATCCACT+TGG | - | chr6.1:11322771-11322790 | None:intergenic | 30.0% | |
| TATTAAGTCCACAAGATGTA+TGG | + | chr6.1:11324476-11324495 | MS.gene87977:CDS | 30.0% | |
| TCAGTATTAGTTGGAAGAAA+TGG | + | chr6.1:11324349-11324368 | MS.gene87977:CDS | 30.0% | |
| TCTAAGTAGTCATAGTTGAT+TGG | - | chr6.1:11322648-11322667 | None:intergenic | 30.0% | |
| TCTTGTGGACTTAATACAAT+TGG | - | chr6.1:11324472-11324491 | None:intergenic | 30.0% | |
| TGACAATAAGTAAATACCGA+AGG | - | chr6.1:11323188-11323207 | None:intergenic | 30.0% | |
| TTATGCAAAACCCAATTAGA+AGG | - | chr6.1:11322945-11322964 | None:intergenic | 30.0% | |
| ! | ATCATAAGGTGTTAGATTAG+TGG | - | chr6.1:11323500-11323519 | None:intergenic | 30.0% |
| ! | TAAGCAATTTTTGCCAAGTT+GGG | + | chr6.1:11323877-11323896 | MS.gene87977:CDS | 30.0% |
| ! | TTAAGCAATTTTTGCCAAGT+TGG | + | chr6.1:11323876-11323895 | MS.gene87977:CDS | 30.0% |
| !! | TCTCTCTTTTAACTGTTTGT+AGG | - | chr6.1:11323963-11323982 | None:intergenic | 30.0% |
| !!! | CCCCTTATTATTATTTTGGT+TGG | + | chr6.1:11323374-11323393 | MS.gene87977:intron | 30.0% |
| !!! | TGGTTATTTTAGAAGTGTCT+CGG | + | chr6.1:11323433-11323452 | MS.gene87977:intron | 30.0% |
| !!! | TTAAGGATTATTTTAGCGTC+GGG | + | chr6.1:11323242-11323261 | MS.gene87977:intron | 30.0% |
| AAAGGACCATATGACAAGAT+TGG | + | chr6.1:11323596-11323615 | MS.gene87977:CDS | 35.0% | |
| AAGCTTTACACTCATTGACA+GGG | + | chr6.1:11324012-11324031 | MS.gene87977:CDS | 35.0% | |
| AGTAGTCATAGTTGATTGGT+TGG | - | chr6.1:11322644-11322663 | None:intergenic | 35.0% | |
| ATAAACTCCGATTCAATAGG+CGG | - | chr6.1:11323794-11323813 | None:intergenic | 35.0% | |
| ATTGTGACATTGGAAGAAGA+TGG | + | chr6.1:11323629-11323648 | MS.gene87977:CDS | 35.0% | |
| GAACAAGAATTCAATGGACA+TGG | + | chr6.1:11322666-11322685 | MS.gene87977:CDS | 35.0% | |
| GACTTAATACAATTGGTTGG+AGG | - | chr6.1:11324465-11324484 | None:intergenic | 35.0% | |
| GTGGACTTAATACAATTGGT+TGG | - | chr6.1:11324468-11324487 | None:intergenic | 35.0% | |
| GTGTAAACTCTCTCTTGTAT+TGG | - | chr6.1:11322596-11322615 | None:intergenic | 35.0% | |
| GTTTGATTCCTGAATGTGTA+AGG | - | chr6.1:11323345-11323364 | None:intergenic | 35.0% | |
| TACTGTCAAATGACTAAGGA+TGG | - | chr6.1:11323714-11323733 | None:intergenic | 35.0% | |
| TGCTTACTGTCAAATGACTA+AGG | - | chr6.1:11323718-11323737 | None:intergenic | 35.0% | |
| TTCATGGTCTCCTTCTAATT+GGG | + | chr6.1:11322932-11322951 | MS.gene87977:CDS | 35.0% | |
| TTTCATGGTCTCCTTCTAAT+TGG | + | chr6.1:11322931-11322950 | MS.gene87977:CDS | 35.0% | |
| ! | AAGCAATTTTTGCCAAGTTG+GGG | + | chr6.1:11323878-11323897 | MS.gene87977:CDS | 35.0% |
| ! | ACATTGGAAGAAGATGGATT+AGG | + | chr6.1:11323635-11323654 | MS.gene87977:CDS | 35.0% |
| ! | CAATTCTGAGGAATCTATTC+AGG | + | chr6.1:11322974-11322993 | MS.gene87977:CDS | 35.0% |
| ! | TCATAGTTGATTGGTTGGTA+AGG | - | chr6.1:11322639-11322658 | None:intergenic | 35.0% |
| !! | TTTGGTGATGCTGTTATTCA+AGG | + | chr6.1:11322855-11322874 | MS.gene87977:CDS | 35.0% |
| !!! | AAGGTACTGAAGCTACTTTT+GGG | - | chr6.1:11322620-11322639 | None:intergenic | 35.0% |
| !!! | GGTGTGTTTCTAGTAGATTT+TGG | - | chr6.1:11322528-11322547 | None:intergenic | 35.0% |
| !!! | TAAGGATTATTTTAGCGTCG+GGG | + | chr6.1:11323243-11323262 | MS.gene87977:intron | 35.0% |
| !!! | TAAGGTACTGAAGCTACTTT+TGG | - | chr6.1:11322621-11322640 | None:intergenic | 35.0% |
| AGTCCACAAGATGTATGGAA+AGG | + | chr6.1:11324481-11324500 | MS.gene87977:CDS | 40.0% | |
| CCAGAAGCAACTTATGCAAT+AGG | + | chr6.1:11323740-11323759 | MS.gene87977:CDS | 40.0% | |
| CCTATTGCATAAGTTGCTTC+TGG | - | chr6.1:11323743-11323762 | None:intergenic | 40.0% | |
| CTGTCTCTTGAGGTTACAAA+AGG | + | chr6.1:11323470-11323489 | MS.gene87977:intron | 40.0% | |
| CTTAATACTGCAGTGTCAGA+AGG | + | chr6.1:11322828-11322847 | MS.gene87977:CDS | 40.0% | |
| GAAGCTTTACACTCATTGAC+AGG | + | chr6.1:11324011-11324030 | MS.gene87977:CDS | 40.0% | |
| GATACAATGAGGGACTATTG+TGG | - | chr6.1:11323045-11323064 | None:intergenic | 40.0% | |
| GATTTGAACTCTGTCTCTTG+AGG | + | chr6.1:11323460-11323479 | MS.gene87977:intron | 40.0% | |
| GCAGAAGATAGTGAAGATAG+TGG | + | chr6.1:11323923-11323942 | MS.gene87977:CDS | 40.0% | |
| GGAGTCACATTTGAAGAAGT+TGG | + | chr6.1:11322687-11322706 | MS.gene87977:CDS | 40.0% | |
| GGCTATTCGTTACACATTCA+GGG | - | chr6.1:11323024-11323043 | None:intergenic | 40.0% | |
| GTCACATTTGAAGAAGTTGG+TGG | + | chr6.1:11322690-11322709 | MS.gene87977:CDS | 40.0% | |
| TCAATGAGTGTAAAGCTTCG+AGG | - | chr6.1:11324010-11324029 | None:intergenic | 40.0% | |
| TGACTACTCCTTACACATTC+AGG | + | chr6.1:11323334-11323353 | MS.gene87977:intron | 40.0% | |
| TGATTATCTGTTCCCCAACT+TGG | - | chr6.1:11323893-11323912 | None:intergenic | 40.0% | |
| TGGAAGTTGTATGGCCAAAA+TGG | + | chr6.1:11322710-11322729 | MS.gene87977:CDS | 40.0% | |
| TGGCTATTCGTTACACATTC+AGG | - | chr6.1:11323025-11323044 | None:intergenic | 40.0% | |
| ! | AGATAGTGAAGATAGTGGTG+AGG | + | chr6.1:11323928-11323947 | MS.gene87977:CDS | 40.0% |
| ! | ATGGAACCTGTCATTTGAAG+TGG | - | chr6.1:11323695-11323714 | None:intergenic | 40.0% |
| ! | CTTCTTATAAGGCACCTATG+TGG | + | chr6.1:11322784-11322803 | MS.gene87977:CDS | 40.0% |
| ! | TCTTTGCCACTTCAAATGAC+AGG | + | chr6.1:11323686-11323705 | MS.gene87977:CDS | 40.0% |
| ! | TGAAGATAGTGGTGAGGAAA+TGG | + | chr6.1:11323934-11323953 | MS.gene87977:CDS | 40.0% |
| ! | TGTCATTTGAAGTGGCAAAG+AGG | - | chr6.1:11323687-11323706 | None:intergenic | 40.0% |
| !! | AGAAGTTGGTGGAAGTTGTA+TGG | + | chr6.1:11322701-11322720 | MS.gene87977:CDS | 40.0% |
| AACGCTGTCTCACACATCTA+GGG | + | chr6.1:11324268-11324287 | MS.gene87977:intron | 45.0% | |
| AATACGAGCGAAGAGGAGAA+AGG | + | chr6.1:11323827-11323846 | MS.gene87977:CDS | 45.0% | |
| AGCGAAGAGGAGAAAGGATT+TGG | + | chr6.1:11323833-11323852 | MS.gene87977:CDS | 45.0% | |
| CCACAAGATGTATGGAAAGG+AGG | + | chr6.1:11324484-11324503 | MS.gene87977:CDS | 45.0% | |
| CCTCCTTTCCATACATCTTG+TGG | - | chr6.1:11324487-11324506 | None:intergenic | 45.0% | |
| CTTTCAATTCCTGATGAGCC+TGG | - | chr6.1:11324400-11324419 | None:intergenic | 45.0% | |
| GAAACATACCTGTTCAGTCC+AGG | + | chr6.1:11324379-11324398 | MS.gene87977:CDS | 45.0% | |
| GCAGTGTCAGAAGGAGAATT+TGG | + | chr6.1:11322837-11322856 | MS.gene87977:CDS | 45.0% | |
| GGTGATGCTGTTATTCAAGG+AGG | + | chr6.1:11322858-11322877 | MS.gene87977:CDS | 45.0% | |
| TTCTCCTCTTCGCTCGTATT+CGG | - | chr6.1:11323827-11323846 | None:intergenic | 45.0% | |
| ! | ACTTTTCCACCATGCCACAT+AGG | - | chr6.1:11322801-11322820 | None:intergenic | 45.0% |
| ! | CAATCCACTTGGTAGCAACA+TGG | - | chr6.1:11322760-11322779 | None:intergenic | 45.0% |
| ! | TATAAGGCACCTATGTGGCA+TGG | + | chr6.1:11322789-11322808 | MS.gene87977:CDS | 45.0% |
| ACTCCGATTCAATAGGCGGT+CGG | - | chr6.1:11323790-11323809 | None:intergenic | 50.0% | |
| ATAACGGCACTCACGCATCT+AGG | + | chr6.1:11324157-11324176 | MS.gene87977:intron | 50.0% | |
| CAACGCTGTCTCACACATCT+AGG | + | chr6.1:11324267-11324286 | MS.gene87977:intron | 50.0% | |
| GCTACCATGTTGCTACCAAG+TGG | + | chr6.1:11322753-11322772 | MS.gene87977:CDS | 50.0% | |
| TAACGGCACTCACGCATCTA+GGG | + | chr6.1:11324158-11324177 | MS.gene87977:intron | 50.0% | |
| TAGCCGACCGCCTATTGAAT+CGG | + | chr6.1:11323784-11323803 | MS.gene87977:CDS | 50.0% | |
| CTGATGAGCCTGGACTGAAC+AGG | - | chr6.1:11324390-11324409 | None:intergenic | 55.0% | |
| CTGTTCAGTCCAGGCTCATC+AGG | + | chr6.1:11324388-11324407 | MS.gene87977:CDS | 55.0% | |
| TCCTCCGAATACGAGCGAAG+AGG | + | chr6.1:11323820-11323839 | MS.gene87977:CDS | 55.0% | |
| TCCTCTTCGCTCGTATTCGG+AGG | - | chr6.1:11323824-11323843 | None:intergenic | 55.0% | |
| ! | AAGGCACCTATGTGGCATGG+TGG | + | chr6.1:11322792-11322811 | MS.gene87977:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 11322486 | 11324534 | 11322486 | ID=MS.gene87977 |
| chr6.1 | mRNA | 11322486 | 11324534 | 11322486 | ID=MS.gene87977.t1;Parent=MS.gene87977 |
| chr6.1 | exon | 11322486 | 11322995 | 11322486 | ID=MS.gene87977.t1.exon1;Parent=MS.gene87977.t1 |
| chr6.1 | CDS | 11322486 | 11322995 | 11322486 | ID=cds.MS.gene87977.t1;Parent=MS.gene87977.t1 |
| chr6.1 | exon | 11323581 | 11324033 | 11323581 | ID=MS.gene87977.t1.exon2;Parent=MS.gene87977.t1 |
| chr6.1 | CDS | 11323581 | 11324033 | 11323581 | ID=cds.MS.gene87977.t1;Parent=MS.gene87977.t1 |
| chr6.1 | exon | 11324337 | 11324534 | 11324337 | ID=MS.gene87977.t1.exon3;Parent=MS.gene87977.t1 |
| chr6.1 | CDS | 11324337 | 11324534 | 11324337 | ID=cds.MS.gene87977.t1;Parent=MS.gene87977.t1 |
| Gene Sequence |
| Protein sequence |
