Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96753.t1 | XP_003591062.1 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 3.80E-150 | 540.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96753.t1 | Q9ZVL6 | 68.9 | 296 | 74 | 3 | 1 | 289 | 1 | 285 | 5.1e-103 | 375.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96753.t1 | G7I7H7 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 2.8e-150 | 540.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene96753 | 0.854525 | 1.16E-61 | -1.69E-46 |
| MS.gene049173 | MS.gene96753 | 0.853084 | 3.02E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene96753 | 0.864579 | 1.10E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene96753 | 0.875304 | 3.43E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene96753 | 0.897315 | 1.58E-76 | -1.69E-46 |
| MS.gene049320 | MS.gene96753 | 0.886689 | 2.75E-72 | -1.69E-46 |
| MS.gene04939 | MS.gene96753 | 0.83834 | 3.05E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene96753 | 0.829346 | 5.42E-55 | -1.69E-46 |
| MS.gene049611 | MS.gene96753 | -0.806854 | 6.72E-50 | -1.69E-46 |
| MS.gene049614 | MS.gene96753 | 0.822659 | 2.10E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene96753 | 0.830537 | 2.78E-55 | -1.69E-46 |
| MS.gene049634 | MS.gene96753 | -0.812295 | 4.55E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene96753 | 0.818089 | 2.35E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene96753 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene96753 | 0.886995 | 2.10E-72 | -1.69E-46 |
| MS.gene050165 | MS.gene96753 | 0.889368 | 2.58E-73 | -1.69E-46 |
| MS.gene050173 | MS.gene96753 | -0.807165 | 5.78E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene96753 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene96753 | 0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene96753 | 0.890838 | 6.86E-74 | -1.69E-46 |
| MS.gene050444 | MS.gene96753 | 0.866145 | 3.53E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene96753 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene96753 | 0.874277 | 7.66E-68 | -1.69E-46 |
| MS.gene050518 | MS.gene96753 | 0.854909 | 8.99E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene96753 | 0.81712 | 3.89E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene96753 | 0.808215 | 3.46E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene96753 | 0.890174 | 1.25E-73 | -1.69E-46 |
| MS.gene050675 | MS.gene96753 | 0.861402 | 1.05E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene96753 | 0.86473 | 9.85E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene96753 | 0.827918 | 1.20E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene96753 | 0.814033 | 1.89E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene96753 | 0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene96753 | 0.863976 | 1.69E-64 | -1.69E-46 |
| MS.gene05079 | MS.gene96753 | -0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene96753 | 0.834624 | 2.69E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene96753 | 0.834346 | 3.16E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene96753 | 0.831666 | 1.47E-55 | -1.69E-46 |
| MS.gene050876 | MS.gene96753 | 0.820882 | 5.42E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene96753 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene96753 | 0.823055 | 1.70E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene96753 | 0.849009 | 4.26E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene96753 | 0.874689 | 5.55E-68 | -1.69E-46 |
| MS.gene051228 | MS.gene96753 | 0.855862 | 4.74E-62 | -1.69E-46 |
| MS.gene051268 | MS.gene96753 | 0.816713 | 4.80E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene96753 | 0.81852 | 1.88E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene96753 | 0.830049 | 3.66E-55 | -1.69E-46 |
| MS.gene051617 | MS.gene96753 | 0.819348 | 1.22E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene96753 | -0.807036 | 6.15E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene96753 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene96753 | 0.899444 | 1.97E-77 | -1.69E-46 |
| MS.gene051858 | MS.gene96753 | 0.846501 | 2.09E-59 | -1.69E-46 |
| MS.gene051949 | MS.gene96753 | 0.873107 | 1.90E-67 | -1.69E-46 |
| MS.gene052271 | MS.gene96753 | 0.877146 | 7.94E-69 | -1.69E-46 |
| MS.gene052290 | MS.gene96753 | 0.826549 | 2.55E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene96753 | 0.871103 | 8.82E-67 | -1.69E-46 |
| MS.gene052482 | MS.gene96753 | 0.809256 | 2.07E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene96753 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene96753 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene96753 | 0.853093 | 3.00E-61 | -1.69E-46 |
| MS.gene052670 | MS.gene96753 | 0.805743 | 1.15E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene96753 | 0.851218 | 1.02E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene96753 | 0.857877 | 1.21E-62 | -1.69E-46 |
| MS.gene052916 | MS.gene96753 | 0.840721 | 7.33E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene96753 | 0.823403 | 1.41E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene96753 | 0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene96753 | 0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene96753 | 0.840304 | 9.43E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene96753 | 0.815061 | 1.12E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene96753 | 0.865313 | 6.46E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene96753 | 0.860938 | 1.46E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene96753 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene053420 | MS.gene96753 | -0.822228 | 2.65E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene96753 | 0.828948 | 6.77E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene96753 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene96753 | -0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene96753 | -0.827195 | 1.79E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene96753 | 0.824327 | 8.57E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene96753 | 0.869178 | 3.76E-66 | -1.69E-46 |
| MS.gene053824 | MS.gene96753 | 0.848562 | 5.66E-60 | -1.69E-46 |
| MS.gene053915 | MS.gene96753 | 0.805064 | 1.60E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene96753 | 0.848539 | 5.75E-60 | -1.69E-46 |
| MS.gene054374 | MS.gene96753 | 0.808946 | 2.41E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene96753 | 0.84818 | 7.22E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene96753 | 0.830114 | 3.52E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene96753 | 0.876436 | 1.40E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene96753 | 0.889811 | 1.73E-73 | -1.69E-46 |
| MS.gene05470 | MS.gene96753 | 0.809596 | 1.75E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene96753 | 0.825472 | 4.60E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene96753 | 0.87267 | 2.66E-67 | -1.69E-46 |
| MS.gene05505 | MS.gene96753 | 0.82727 | 1.72E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene96753 | -0.822098 | 2.84E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene96753 | 0.844327 | 8.10E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene96753 | 0.864682 | 1.02E-64 | -1.69E-46 |
| MS.gene055224 | MS.gene96753 | 0.81312 | 3.01E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene96753 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene96753 | 0.880601 | 4.80E-70 | -1.69E-46 |
| MS.gene055397 | MS.gene96753 | 0.830722 | 2.50E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene96753 | 0.838495 | 2.78E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene96753 | 0.885385 | 8.51E-72 | -1.69E-46 |
| MS.gene055577 | MS.gene96753 | 0.843185 | 1.64E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene96753 | 0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene96753 | 0.826156 | 3.17E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene96753 | 0.858792 | 6.46E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene96753 | 0.80499 | 1.66E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene96753 | 0.832524 | 9.00E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene96753 | 0.858507 | 7.85E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene96753 | 0.845301 | 4.42E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene96753 | 0.861313 | 1.12E-63 | -1.69E-46 |
| MS.gene055776 | MS.gene96753 | 0.8324 | 9.66E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene96753 | 0.831513 | 1.60E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene96753 | 0.849388 | 3.34E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene96753 | 0.868653 | 5.56E-66 | -1.69E-46 |
| MS.gene055956 | MS.gene96753 | -0.828004 | 1.14E-54 | -1.69E-46 |
| MS.gene056028 | MS.gene96753 | 0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene96753 | 0.836871 | 7.26E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene96753 | 0.811285 | 7.56E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene96753 | 0.84194 | 3.50E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene96753 | 0.857235 | 1.87E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene96753 | 0.846679 | 1.87E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene96753 | 0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene96753 | 0.898453 | 5.23E-77 | -1.69E-46 |
| MS.gene056692 | MS.gene96753 | 0.815512 | 8.90E-52 | -1.69E-46 |
| MS.gene056903 | MS.gene96753 | 0.855389 | 6.52E-62 | -1.69E-46 |
| MS.gene056946 | MS.gene96753 | 0.820141 | 8.02E-53 | -1.69E-46 |
| MS.gene056947 | MS.gene96753 | 0.826785 | 2.24E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene96753 | 0.844232 | 8.59E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene96753 | 0.846536 | 2.04E-59 | -1.69E-46 |
| MS.gene057246 | MS.gene96753 | 0.815657 | 8.26E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene96753 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene96753 | 0.824905 | 6.26E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene96753 | 0.84338 | 1.45E-58 | -1.69E-46 |
| MS.gene057926 | MS.gene96753 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene96753 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene96753 | 0.834109 | 3.62E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene96753 | 0.80675 | 7.07E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene96753 | 0.830297 | 3.18E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene96753 | 0.8429 | 1.95E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene96753 | 0.882656 | 8.68E-71 | -1.69E-46 |
| MS.gene058544 | MS.gene96753 | 0.828616 | 8.14E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene96753 | -0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene96753 | 0.858227 | 9.52E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene96753 | 0.891819 | 2.80E-74 | -1.69E-46 |
| MS.gene058838 | MS.gene96753 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene96753 | -0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene96753 | 0.888343 | 6.42E-73 | -1.69E-46 |
| MS.gene059023 | MS.gene96753 | 0.854896 | 9.07E-62 | -1.69E-46 |
| MS.gene059029 | MS.gene96753 | 0.857481 | 1.59E-62 | -1.69E-46 |
| MS.gene059079 | MS.gene96753 | 0.805912 | 1.06E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene96753 | 0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene96753 | 0.85921 | 4.84E-63 | -1.69E-46 |
| MS.gene05914 | MS.gene96753 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene96753 | 0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene96753 | 0.819629 | 1.05E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene96753 | 0.802086 | 6.63E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene96753 | 0.807065 | 6.06E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene96753 | 0.895959 | 5.84E-76 | -1.69E-46 |
| MS.gene059718 | MS.gene96753 | 0.866769 | 2.24E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene96753 | 0.818554 | 1.85E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene96753 | 0.819351 | 1.22E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene96753 | 0.819852 | 9.34E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene96753 | 0.837392 | 5.34E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene96753 | 0.842476 | 2.53E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene96753 | 0.840604 | 7.87E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene96753 | 0.817981 | 2.49E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene96753 | 0.869936 | 2.13E-66 | -1.69E-46 |
| MS.gene060727 | MS.gene96753 | 0.80154 | 8.58E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene96753 | 0.817657 | 2.94E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene96753 | 0.861549 | 9.49E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene96753 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene96753 | 0.84917 | 3.84E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene96753 | 0.817898 | 2.60E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene96753 | 0.814272 | 1.68E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene96753 | 0.827102 | 1.88E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene96753 | 0.830685 | 2.56E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene96753 | 0.83507 | 2.08E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene96753 | 0.848203 | 7.12E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene96753 | 0.850254 | 1.91E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96753.t1 | MTR_1g082420 | 98.616 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 0.0 | 576 |
| MS.gene96753.t1 | MTR_1g082420 | 98.068 | 207 | 4 | 0 | 1 | 207 | 1 | 207 | 1.45e-146 | 410 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96753.t1 | AT1G54780 | 69.257 | 296 | 73 | 3 | 1 | 289 | 1 | 285 | 1.77e-137 | 390 |
Find 69 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAGAGTTGGGAGGAAAA+AGG | 0.232772 | 1.1:+60975900 | None:intergenic |
| GAAACGGTTGTTATCTGATT+TGG | 0.264813 | 1.1:-60975552 | MS.gene96753:CDS |
| TGAGTTTGCGGACCAAATTT+TGG | 0.287868 | 1.1:-60974898 | MS.gene96753:CDS |
| GCATTACCACTAAGTAAAAC+TGG | 0.297661 | 1.1:+60975674 | None:intergenic |
| GATACCAACGCTCCAAAATT+TGG | 0.302536 | 1.1:+60974886 | None:intergenic |
| GAAATGAGAGAGGTTGATTT+GGG | 0.321070 | 1.1:+60975839 | None:intergenic |
| GGAAATGAGAGAGGTTGATT+TGG | 0.327476 | 1.1:+60975838 | None:intergenic |
| CTTACTCACTCATGCTCAAC+AGG | 0.332202 | 1.1:-60975738 | MS.gene96753:CDS |
| ATTAGAAACAATGGGTTTGT+AGG | 0.342048 | 1.1:+60975817 | None:intergenic |
| TCTTGTAGTTGGAGGTTTGT+TGG | 0.348630 | 1.1:-60973775 | MS.gene96753:CDS |
| ACCGTTTCAGAGAACCTTCC+AGG | 0.350686 | 1.1:-60974744 | MS.gene96753:intron |
| TCAACCACATAGGCCTCTTT+AGG | 0.375166 | 1.1:+60975614 | None:intergenic |
| AGAAGTGGAGAGAGAGAGTT+GGG | 0.377846 | 1.1:+60975890 | None:intergenic |
| CAGAAAGAAGGAGCAGTTAC+TGG | 0.391425 | 1.1:-60974813 | MS.gene96753:CDS |
| GGAGAGAAGGTGAAGATTTG+AGG | 0.395997 | 1.1:+60975864 | None:intergenic |
| TGAGAGAGGTTGATTTGGGT+TGG | 0.410728 | 1.1:+60975843 | None:intergenic |
| CAATTCTCTCTTGTAGTTGG+AGG | 0.420228 | 1.1:-60973783 | MS.gene96753:CDS |
| GTGCATGAAGGAAGGGTTGG+TGG | 0.423912 | 1.1:+60975764 | None:intergenic |
| TATTGCATTTGTTGTTCCTA+TGG | 0.427254 | 1.1:-60973751 | MS.gene96753:CDS |
| CGACTAGTTGCTGCCATTGA+CGG | 0.431818 | 1.1:-60973894 | MS.gene96753:CDS |
| GTTGATTTGGGTTGGAGAGA+AGG | 0.438011 | 1.1:+60975851 | None:intergenic |
| ACCGAGGGACCACCAGGATC+TGG | 0.448423 | 1.1:+60973867 | None:intergenic |
| GGACAATTCTCTCTTGTAGT+TGG | 0.450595 | 1.1:-60973786 | MS.gene96753:CDS |
| GAGAAGTGGAGAGAGAGAGT+TGG | 0.457937 | 1.1:+60975889 | None:intergenic |
| ACGTTTGTCGTCTTTAACCG+AGG | 0.492907 | 1.1:+60973851 | None:intergenic |
| GCCTATGTGGTTGATGATGC+TGG | 0.497501 | 1.1:-60975605 | MS.gene96753:CDS |
| TTTACTTAGTGGTAATGCAT+TGG | 0.498407 | 1.1:-60975669 | MS.gene96753:CDS |
| TAATGAGCGTCCACCTAAAG+AGG | 0.498637 | 1.1:-60975627 | MS.gene96753:CDS |
| TCCAGATCCTGGTGGTCCCT+CGG | 0.499224 | 1.1:-60973868 | MS.gene96753:CDS |
| CAACCGTTTCAAATCAGACT+TGG | 0.499905 | 1.1:+60975565 | None:intergenic |
| TTGGTATCCTTCTGTGGAAG+AGG | 0.505336 | 1.1:-60974871 | MS.gene96753:CDS |
| ACCTGGAAGGTTCTCTGAAA+CGG | 0.506810 | 1.1:+60974743 | None:intergenic |
| GAAGATTTGAGGTTGAGAAG+TGG | 0.512998 | 1.1:+60975875 | None:intergenic |
| TTTGCATGCAGTATTGGCTA+CGG | 0.514698 | 1.1:-60973955 | MS.gene96753:intron |
| TGTTATCTGATTTGGAATCA+AGG | 0.519003 | 1.1:-60975544 | MS.gene96753:CDS |
| TCTTTAACCGAGGGACCACC+AGG | 0.532906 | 1.1:+60973861 | None:intergenic |
| GTAAGGTTGTGCATGAAGGA+AGG | 0.533369 | 1.1:+60975756 | None:intergenic |
| CTGTTGAGCATGAGTGAGTA+AGG | 0.534711 | 1.1:+60975739 | None:intergenic |
| TGACCAAGTCTGATTTGAAA+CGG | 0.535029 | 1.1:-60975568 | MS.gene96753:CDS |
| ATTGACGGACTTCCAGATCC+TGG | 0.535082 | 1.1:-60973879 | MS.gene96753:CDS |
| AGGATCTGGAAGTCCGTCAA+TGG | 0.539431 | 1.1:+60973881 | None:intergenic |
| TAAGCATAGTATTGTACCAT+AGG | 0.544493 | 1.1:+60973735 | None:intergenic |
| TCATTGCCCTCTTCCACAGA+AGG | 0.552223 | 1.1:+60974864 | None:intergenic |
| CCTACGGCTTGAACAAAAGC+AGG | 0.557352 | 1.1:+60974786 | None:intergenic |
| GTTGTGCATGAAGGAAGGGT+TGG | 0.563287 | 1.1:+60975761 | None:intergenic |
| GGCAGCAACTAGTCGTTTAG+CGG | 0.568536 | 1.1:+60973902 | None:intergenic |
| CTTGTAACAAGTCAGAAAGA+AGG | 0.568574 | 1.1:-60974825 | MS.gene96753:CDS |
| GGGCAATGACAAGGGTGTTG+TGG | 0.572099 | 1.1:-60974850 | MS.gene96753:CDS |
| TATTACACTTAGAAAACTCA+CGG | 0.578085 | 1.1:-60975501 | MS.gene96753:intron |
| GTGAGTAAGGTTGTGCATGA+AGG | 0.585716 | 1.1:+60975752 | None:intergenic |
| ACCACATAGGCCTCTTTAGG+TGG | 0.587301 | 1.1:+60975617 | None:intergenic |
| TGTGGAAGAGGGCAATGACA+AGG | 0.591400 | 1.1:-60974859 | MS.gene96753:CDS |
| CATTACCACTAAGTAAAACT+GGG | 0.602655 | 1.1:+60975675 | None:intergenic |
| CGTTTGTCGTCTTTAACCGA+GGG | 0.605535 | 1.1:+60973852 | None:intergenic |
| GGAGCGTTGGTATCCTTCTG+TGG | 0.606556 | 1.1:-60974877 | MS.gene96753:CDS |
| GAAGAGACAGAAGAAAAGCG+TGG | 0.608619 | 1.1:-60973807 | MS.gene96753:CDS |
| GGGTTTGTAGGAAATGAGAG+AGG | 0.610811 | 1.1:+60975829 | None:intergenic |
| TGGTATCCTTCTGTGGAAGA+GGG | 0.611132 | 1.1:-60974870 | MS.gene96753:CDS |
| TCCACCTAAAGAGGCCTATG+TGG | 0.614674 | 1.1:-60975618 | MS.gene96753:CDS |
| AGTGGAGAGAGAGAGTTGGG+AGG | 0.617964 | 1.1:+60975893 | None:intergenic |
| TAAGGTTGTGCATGAAGGAA+GGG | 0.619871 | 1.1:+60975757 | None:intergenic |
| TGAGTCTAACTTCAAAACAA+AGG | 0.628354 | 1.1:-60973829 | MS.gene96753:CDS |
| GCCATCAGGAAGTACCTGGA+AGG | 0.654042 | 1.1:+60974730 | None:intergenic |
| GTGGAAGAGGGCAATGACAA+GGG | 0.659164 | 1.1:-60974858 | MS.gene96753:CDS |
| AAAGAAGGAGCAGTTACTGG+TGG | 0.670414 | 1.1:-60974810 | MS.gene96753:CDS |
| TCCAGCATCATCAACCACAT+AGG | 0.674153 | 1.1:+60975604 | None:intergenic |
| GACGGACTTCCAGATCCTGG+TGG | 0.696278 | 1.1:-60973876 | MS.gene96753:CDS |
| TTACTCACTCATGCTCAACA+GGG | 0.696497 | 1.1:-60975737 | MS.gene96753:CDS |
| TCTCTGAAACGGTAGCATCG+AGG | 0.740488 | 1.1:+60974754 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTTTTTCCTTTATTT+AGG | + | chr1.1:60974427-60974446 | None:intergenic | 15.0% |
| !! | AAATTCAATTCAATGACATA+TGG | + | chr1.1:60974164-60974183 | None:intergenic | 20.0% |
| !! | ATAAGCAATTATATGATACA+AGG | - | chr1.1:60974359-60974378 | MS.gene96753:intron | 20.0% |
| !! | ATGTCATTGAATTGAATTTA+GGG | - | chr1.1:60974165-60974184 | MS.gene96753:intron | 20.0% |
| !! | CTCTTAACCAAAAAAAAAAA+CGG | + | chr1.1:60975288-60975307 | None:intergenic | 20.0% |
| !! | TATGTCATTGAATTGAATTT+AGG | - | chr1.1:60974164-60974183 | MS.gene96753:intron | 20.0% |
| !! | TGATCAATAATCTGATAAAA+TGG | - | chr1.1:60974644-60974663 | MS.gene96753:intron | 20.0% |
| !!! | ATTTTCATATAAGCTATAAG+CGG | + | chr1.1:60974296-60974315 | None:intergenic | 20.0% |
| !!! | TTTTCTTGAAAACAAATACA+AGG | - | chr1.1:60975208-60975227 | MS.gene96753:intron | 20.0% |
| !!! | TTTTTCTTCACTAACAAATA+TGG | - | chr1.1:60975056-60975075 | MS.gene96753:intron | 20.0% |
| !!! | TTTTTGAGATTAGAAACAAT+GGG | + | chr1.1:60973821-60973840 | None:intergenic | 20.0% |
| !!! | TTTTTTGTGATAGCTAAAAA+GGG | + | chr1.1:60975440-60975459 | None:intergenic | 20.0% |
| ! | AATGACCATAAAGATAATGA+TGG | - | chr1.1:60975378-60975397 | MS.gene96753:intron | 25.0% |
| ! | ACACTGAAATTAAATGGATA+GGG | + | chr1.1:60975471-60975490 | None:intergenic | 25.0% |
| ! | ATGATGATTATGTCTTTCAA+AGG | - | chr1.1:60975006-60975025 | MS.gene96753:intron | 25.0% |
| ! | CAACATACACTGAAATTAAA+TGG | + | chr1.1:60975477-60975496 | None:intergenic | 25.0% |
| ! | CATATCCATCATTATCTTTA+TGG | + | chr1.1:60975386-60975405 | None:intergenic | 25.0% |
| ! | CATCATCATTGATATGAATA+TGG | - | chr1.1:60975123-60975142 | MS.gene96753:intron | 25.0% |
| ! | GATATGTGTTGTATTGTAAT+AGG | - | chr1.1:60974577-60974596 | MS.gene96753:intron | 25.0% |
| ! | GTTGTATTGTAATAGGAAAA+CGG | - | chr1.1:60974584-60974603 | MS.gene96753:intron | 25.0% |
| ! | TACACTGAAATTAAATGGAT+AGG | + | chr1.1:60975472-60975491 | None:intergenic | 25.0% |
| ! | TATTACACTTAGAAAACTCA+CGG | - | chr1.1:60974126-60974145 | MS.gene96753:intron | 25.0% |
| ! | TCGAAATATAGCCTAAATAA+AGG | - | chr1.1:60974413-60974432 | MS.gene96753:intron | 25.0% |
| ! | TCTATTTAGCATGTTAGTAT+TGG | + | chr1.1:60974492-60974511 | None:intergenic | 25.0% |
| !! | AGAACTAAATTAACCTCTTT+TGG | + | chr1.1:60974390-60974409 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTTTGTAGCATGT+TGG | - | chr1.1:60974939-60974958 | MS.gene96753:intron | 25.0% |
| !!! | CTTTTTGAGATTAGAAACAA+TGG | + | chr1.1:60973822-60973841 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTGATAGCTAAAA+AGG | + | chr1.1:60975441-60975460 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTGTAGCATGTT+GGG | - | chr1.1:60974940-60974959 | MS.gene96753:intron | 25.0% |
| !!! | TTTTTTTTGGTTAAGAGTTG+AGG | - | chr1.1:60975291-60975310 | MS.gene96753:intron | 25.0% |
| AATTTCAGTGTATGTTGTCA+AGG | - | chr1.1:60975480-60975499 | MS.gene96753:intron | 30.0% | |
| ACTGAATATATGGTAAAGGA+CGG | - | chr1.1:60975162-60975181 | MS.gene96753:intron | 30.0% | |
| ATACAAGGTTATACCAAAAG+AGG | - | chr1.1:60974374-60974393 | MS.gene96753:intron | 30.0% | |
| ATGCACTGAATATATGGTAA+AGG | - | chr1.1:60975158-60975177 | MS.gene96753:intron | 30.0% | |
| ATTAAGCTGAAAACTGCTTA+TGG | + | chr1.1:60974256-60974275 | None:intergenic | 30.0% | |
| CATTACCACTAAGTAAAACT+GGG | + | chr1.1:60973955-60973974 | None:intergenic | 30.0% | |
| CTTATTTGAGCTTATTTACC+TGG | - | chr1.1:60974202-60974221 | MS.gene96753:intron | 30.0% | |
| TAAGCATAGTATTGTACCAT+AGG | + | chr1.1:60975895-60975914 | None:intergenic | 30.0% | |
| TACATACTTCGGTTTAAACA+AGG | - | chr1.1:60975513-60975532 | MS.gene96753:CDS | 30.0% | |
| TGAAAACAAATACAAGGTCA+AGG | - | chr1.1:60975214-60975233 | MS.gene96753:intron | 30.0% | |
| TGAGTCTAACTTCAAAACAA+AGG | - | chr1.1:60975798-60975817 | MS.gene96753:CDS | 30.0% | |
| TTGTTTAAACCGAAGTATGT+AGG | + | chr1.1:60975514-60975533 | None:intergenic | 30.0% | |
| TTTCAAAGGATTTACAAGAC+TGG | - | chr1.1:60975020-60975039 | MS.gene96753:intron | 30.0% | |
| ! | ATTAGAAACAATGGGTTTGT+AGG | + | chr1.1:60973813-60973832 | None:intergenic | 30.0% |
| ! | CATTGAATTGAATTTAGGGT+CGG | - | chr1.1:60974169-60974188 | MS.gene96753:intron | 30.0% |
| ! | TGTTGAGTATTTGAGTTATG+TGG | - | chr1.1:60974680-60974699 | MS.gene96753:intron | 30.0% |
| ! | TTTACTTAGTGGTAATGCAT+TGG | - | chr1.1:60973958-60973977 | MS.gene96753:intron | 30.0% |
| !! | AGCAGTTGTGATCATTTTTA+GGG | - | chr1.1:60975625-60975644 | MS.gene96753:CDS | 30.0% |
| !! | TAGCAGTTGTGATCATTTTT+AGG | - | chr1.1:60975624-60975643 | MS.gene96753:CDS | 30.0% |
| !! | TATTGCATTTGTTGTTCCTA+TGG | - | chr1.1:60975876-60975895 | MS.gene96753:CDS | 30.0% |
| !! | TGTTATCTGATTTGGAATCA+AGG | - | chr1.1:60974083-60974102 | MS.gene96753:intron | 30.0% |
| !!! | CATGACACCGTTTTTTTTTT+TGG | - | chr1.1:60975278-60975297 | MS.gene96753:intron | 30.0% |
| !!! | TGTTTTTTTGTAGCATGTTG+GGG | - | chr1.1:60974941-60974960 | MS.gene96753:intron | 30.0% |
| CATCTGTTCACAAACTATGA+AGG | - | chr1.1:60975100-60975119 | MS.gene96753:intron | 35.0% | |
| CATGTCATGCACTGAATATA+TGG | - | chr1.1:60975152-60975171 | MS.gene96753:intron | 35.0% | |
| CTAACAAATATGGCAAGTGT+TGG | - | chr1.1:60975066-60975085 | MS.gene96753:intron | 35.0% | |
| CTTGTAACAAGTCAGAAAGA+AGG | - | chr1.1:60974802-60974821 | MS.gene96753:CDS | 35.0% | |
| GAAACGGTTGTTATCTGATT+TGG | - | chr1.1:60974075-60974094 | MS.gene96753:intron | 35.0% | |
| GCATTACCACTAAGTAAAAC+TGG | + | chr1.1:60973956-60973975 | None:intergenic | 35.0% | |
| GTAAAGGACGGATGATAATT+TGG | - | chr1.1:60975174-60975193 | MS.gene96753:intron | 35.0% | |
| TGCATGCAAAAACCAGATAA+CGG | + | chr1.1:60975662-60975681 | None:intergenic | 35.0% | |
| ! | ATCGAGGATATTTTCTCCTA+CGG | + | chr1.1:60974860-60974879 | None:intergenic | 35.0% |
| ! | CTTCATAGTTTGTGAACAGA+TGG | + | chr1.1:60975102-60975121 | None:intergenic | 35.0% |
| ! | GAAATGAGAGAGGTTGATTT+GGG | + | chr1.1:60973791-60973810 | None:intergenic | 35.0% |
| ! | TAAACAAGGCAACACGTTTT+CGG | - | chr1.1:60975527-60975546 | MS.gene96753:CDS | 35.0% |
| ! | TGACCAAGTCTGATTTGAAA+CGG | - | chr1.1:60974059-60974078 | MS.gene96753:intron | 35.0% |
| ! | TGAGTATTTGAGTTATGTGG+TGG | - | chr1.1:60974683-60974702 | MS.gene96753:intron | 35.0% |
| !! | GCAGTTGTGATCATTTTTAG+GGG | - | chr1.1:60975626-60975645 | MS.gene96753:CDS | 35.0% |
| !!! | GTTTTTTTGTAGCATGTTGG+GGG | - | chr1.1:60974942-60974961 | MS.gene96753:intron | 35.0% |
| AGTTGAGGTTGTGCTTTATC+AGG | - | chr1.1:60975306-60975325 | MS.gene96753:intron | 40.0% | |
| ATGCTCACATGTGTTTATCC+AGG | + | chr1.1:60974223-60974242 | None:intergenic | 40.0% | |
| CAACCGTTTCAAATCAGACT+TGG | + | chr1.1:60974065-60974084 | None:intergenic | 40.0% | |
| CAATTCTCTCTTGTAGTTGG+AGG | - | chr1.1:60975844-60975863 | MS.gene96753:CDS | 40.0% | |
| GATACCAACGCTCCAAAATT+TGG | + | chr1.1:60974744-60974763 | None:intergenic | 40.0% | |
| GGACAATTCTCTCTTGTAGT+TGG | - | chr1.1:60975841-60975860 | MS.gene96753:CDS | 40.0% | |
| GTTGAGGTTGTGCTTTATCA+GGG | - | chr1.1:60975307-60975326 | MS.gene96753:intron | 40.0% | |
| TAAGGTTGTGCATGAAGGAA+GGG | + | chr1.1:60973873-60973892 | None:intergenic | 40.0% | |
| TCTTGTAGTTGGAGGTTTGT+TGG | - | chr1.1:60975852-60975871 | MS.gene96753:CDS | 40.0% | |
| TTACTCACTCATGCTCAACA+GGG | - | chr1.1:60973890-60973909 | MS.gene96753:CDS | 40.0% | |
| TTGAGGTTGTGCTTTATCAG+GGG | - | chr1.1:60975308-60975327 | MS.gene96753:intron | 40.0% | |
| ! | AAGGATTTACAAGACTGGCT+TGG | - | chr1.1:60975025-60975044 | MS.gene96753:intron | 40.0% |
| ! | GAAGATTTGAGGTTGAGAAG+TGG | + | chr1.1:60973755-60973774 | None:intergenic | 40.0% |
| ! | GGAAATGAGAGAGGTTGATT+TGG | + | chr1.1:60973792-60973811 | None:intergenic | 40.0% |
| ! | TGAGTTTGCGGACCAAATTT+TGG | - | chr1.1:60974729-60974748 | MS.gene96753:intron | 40.0% |
| ! | TTCTGCCCAGTTTTACTTAG+TGG | - | chr1.1:60973947-60973966 | MS.gene96753:CDS | 40.0% |
| !! | CTGGTTTTTGCATGCAGTAT+TGG | - | chr1.1:60975666-60975685 | MS.gene96753:CDS | 40.0% |
| !! | TTCAGTGTTAGTTCTGCAGT+AGG | - | chr1.1:60974446-60974465 | MS.gene96753:intron | 40.0% |
| !! | TTTGCATGCAGTATTGGCTA+CGG | - | chr1.1:60975672-60975691 | MS.gene96753:CDS | 40.0% |
| !!! | AGCTGATGCTTTTGAGTTTG+CGG | - | chr1.1:60974717-60974736 | MS.gene96753:intron | 40.0% |
| AAAGAAGGAGCAGTTACTGG+TGG | - | chr1.1:60974817-60974836 | MS.gene96753:CDS | 45.0% | |
| ACGTTTGTCGTCTTTAACCG+AGG | + | chr1.1:60975779-60975798 | None:intergenic | 45.0% | |
| AGAAGTGGAGAGAGAGAGTT+GGG | + | chr1.1:60973740-60973759 | None:intergenic | 45.0% | |
| AGAGAGAGTTGGGAGGAAAA+AGG | + | chr1.1:60973730-60973749 | None:intergenic | 45.0% | |
| ATCCAAATCCACTAGCCATC+AGG | + | chr1.1:60974914-60974933 | None:intergenic | 45.0% | |
| CAGAAAGAAGGAGCAGTTAC+TGG | - | chr1.1:60974814-60974833 | MS.gene96753:CDS | 45.0% | |
| CGTTTGTCGTCTTTAACCGA+GGG | + | chr1.1:60975778-60975797 | None:intergenic | 45.0% | |
| CTGTTGAGCATGAGTGAGTA+AGG | + | chr1.1:60973891-60973910 | None:intergenic | 45.0% | |
| CTTACTCACTCATGCTCAAC+AGG | - | chr1.1:60973889-60973908 | MS.gene96753:CDS | 45.0% | |
| GAAGAGACAGAAGAAAAGCG+TGG | - | chr1.1:60975820-60975839 | MS.gene96753:CDS | 45.0% | |
| GAATCGCTTTGTCAGCATGT+GGG | - | chr1.1:60975243-60975262 | MS.gene96753:intron | 45.0% | |
| GAGAGAGTTGGGAGGAAAAA+GGG | + | chr1.1:60973729-60973748 | None:intergenic | 45.0% | |
| GCAACATCAGAAGACAGACA+TGG | + | chr1.1:60975594-60975613 | None:intergenic | 45.0% | |
| GCTTATGCGCCTACATACTT+CGG | - | chr1.1:60975502-60975521 | MS.gene96753:CDS | 45.0% | |
| GGAGAGAAGGTGAAGATTTG+AGG | + | chr1.1:60973766-60973785 | None:intergenic | 45.0% | |
| GGCACAATACTACCGTTATC+TGG | - | chr1.1:60975647-60975666 | MS.gene96753:CDS | 45.0% | |
| GGGTTTGTAGGAAATGAGAG+AGG | + | chr1.1:60973801-60973820 | None:intergenic | 45.0% | |
| GTAAGGTTGTGCATGAAGGA+AGG | + | chr1.1:60973874-60973893 | None:intergenic | 45.0% | |
| GTGAGTAAGGTTGTGCATGA+AGG | + | chr1.1:60973878-60973897 | None:intergenic | 45.0% | |
| TAATGAGCGTCCACCTAAAG+AGG | - | chr1.1:60974000-60974019 | MS.gene96753:intron | 45.0% | |
| TCAACCACATAGGCCTCTTT+AGG | + | chr1.1:60974016-60974035 | None:intergenic | 45.0% | |
| TCCAGCATCATCAACCACAT+AGG | + | chr1.1:60974026-60974045 | None:intergenic | 45.0% | |
| TGAATCGCTTTGTCAGCATG+TGG | - | chr1.1:60975242-60975261 | MS.gene96753:intron | 45.0% | |
| TGGTATCCTTCTGTGGAAGA+GGG | - | chr1.1:60974757-60974776 | MS.gene96753:CDS | 45.0% | |
| TTCGGCGTGGTGATAAACTA+GGG | - | chr1.1:60975545-60975564 | MS.gene96753:CDS | 45.0% | |
| TTGGTATCCTTCTGTGGAAG+AGG | - | chr1.1:60974756-60974775 | MS.gene96753:CDS | 45.0% | |
| TTTCGGCGTGGTGATAAACT+AGG | - | chr1.1:60975544-60975563 | MS.gene96753:CDS | 45.0% | |
| ! | ACCTGGAAGGTTCTCTGAAA+CGG | + | chr1.1:60974887-60974906 | None:intergenic | 45.0% |
| !! | AGGGGCACTTTCAACATGAA+AGG | - | chr1.1:60975326-60975345 | MS.gene96753:intron | 45.0% |
| !! | GTTGATTTGGGTTGGAGAGA+AGG | + | chr1.1:60973779-60973798 | None:intergenic | 45.0% |
| !! | TGAGAGAGGTTGATTTGGGT+TGG | + | chr1.1:60973787-60973806 | None:intergenic | 45.0% |
| !! | TTCCTGATGGCTAGTGGATT+TGG | - | chr1.1:60974909-60974928 | MS.gene96753:CDS | 45.0% |
| ACCACATAGGCCTCTTTAGG+TGG | + | chr1.1:60974013-60974032 | None:intergenic | 50.0% | |
| ACCGTTTCAGAGAACCTTCC+AGG | - | chr1.1:60974883-60974902 | MS.gene96753:CDS | 50.0% | |
| ACCTTCCAGGTACTTCCTGA+TGG | - | chr1.1:60974896-60974915 | MS.gene96753:CDS | 50.0% | |
| AGGATCTGGAAGTCCGTCAA+TGG | + | chr1.1:60975749-60975768 | None:intergenic | 50.0% | |
| AGGTACTTCCTGATGGCTAG+TGG | - | chr1.1:60974903-60974922 | MS.gene96753:CDS | 50.0% | |
| CCTACGGCTTGAACAAAAGC+AGG | + | chr1.1:60974844-60974863 | None:intergenic | 50.0% | |
| GAGAAGTGGAGAGAGAGAGT+TGG | + | chr1.1:60973741-60973760 | None:intergenic | 50.0% | |
| GGCAGCAACTAGTCGTTTAG+CGG | + | chr1.1:60975728-60975747 | None:intergenic | 50.0% | |
| GTGGAAGAGGGCAATGACAA+GGG | - | chr1.1:60974769-60974788 | MS.gene96753:CDS | 50.0% | |
| GTTGTGCATGAAGGAAGGGT+TGG | + | chr1.1:60973869-60973888 | None:intergenic | 50.0% | |
| TCATTGCCCTCTTCCACAGA+AGG | + | chr1.1:60974766-60974785 | None:intergenic | 50.0% | |
| TCCACCTAAAGAGGCCTATG+TGG | - | chr1.1:60974009-60974028 | MS.gene96753:intron | 50.0% | |
| TGTGGAAGAGGGCAATGACA+AGG | - | chr1.1:60974768-60974787 | MS.gene96753:CDS | 50.0% | |
| ! | CGACTAGTTGCTGCCATTGA+CGG | - | chr1.1:60975733-60975752 | MS.gene96753:CDS | 50.0% |
| !! | ACTAGCCATCAGGAAGTACC+TGG | + | chr1.1:60974904-60974923 | None:intergenic | 50.0% |
| !! | ATTGACGGACTTCCAGATCC+TGG | - | chr1.1:60975748-60975767 | MS.gene96753:CDS | 50.0% |
| !! | CCTGCTTTTGTTCAAGCCGT+AGG | - | chr1.1:60974841-60974860 | MS.gene96753:CDS | 50.0% |
| !! | GCCTATGTGGTTGATGATGC+TGG | - | chr1.1:60974022-60974041 | MS.gene96753:intron | 50.0% |
| !! | TCTCTGAAACGGTAGCATCG+AGG | + | chr1.1:60974876-60974895 | None:intergenic | 50.0% |
| !!! | CGGACCAAATTTTGGAGCGT+TGG | - | chr1.1:60974737-60974756 | MS.gene96753:intron | 50.0% |
| AGTGGAGAGAGAGAGTTGGG+AGG | + | chr1.1:60973737-60973756 | None:intergenic | 55.0% | |
| GTGCATGAAGGAAGGGTTGG+TGG | + | chr1.1:60973866-60973885 | None:intergenic | 55.0% | |
| TCTTTAACCGAGGGACCACC+AGG | + | chr1.1:60975769-60975788 | None:intergenic | 55.0% | |
| ! | AAGGCAACACGTTTTCGGCG+TGG | - | chr1.1:60975532-60975551 | MS.gene96753:CDS | 55.0% |
| !! | GCCATCAGGAAGTACCTGGA+AGG | + | chr1.1:60974900-60974919 | None:intergenic | 55.0% |
| !! | GGAGCGTTGGTATCCTTCTG+TGG | - | chr1.1:60974750-60974769 | MS.gene96753:CDS | 55.0% |
| !! | GGGCAATGACAAGGGTGTTG+TGG | - | chr1.1:60974777-60974796 | MS.gene96753:CDS | 55.0% |
| TCCAGATCCTGGTGGTCCCT+CGG | - | chr1.1:60975759-60975778 | MS.gene96753:CDS | 60.0% | |
| ! | GACGGACTTCCAGATCCTGG+TGG | - | chr1.1:60975751-60975770 | MS.gene96753:CDS | 60.0% |
| ACCGAGGGACCACCAGGATC+TGG | + | chr1.1:60975763-60975782 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 60973719 | 60975930 | 60973719 | ID=MS.gene96753 |
| chr1.1 | mRNA | 60973719 | 60975930 | 60973719 | ID=MS.gene96753.t1;Parent=MS.gene96753 |
| chr1.1 | exon | 60975502 | 60975930 | 60975502 | ID=MS.gene96753.t1.exon1;Parent=MS.gene96753.t1 |
| chr1.1 | CDS | 60975502 | 60975930 | 60975502 | ID=cds.MS.gene96753.t1;Parent=MS.gene96753.t1 |
| chr1.1 | exon | 60974745 | 60974937 | 60974745 | ID=MS.gene96753.t1.exon2;Parent=MS.gene96753.t1 |
| chr1.1 | CDS | 60974745 | 60974937 | 60974745 | ID=cds.MS.gene96753.t1;Parent=MS.gene96753.t1 |
| chr1.1 | exon | 60973719 | 60973966 | 60973719 | ID=MS.gene96753.t1.exon3;Parent=MS.gene96753.t1 |
| chr1.1 | CDS | 60973719 | 60973966 | 60973719 | ID=cds.MS.gene96753.t1;Parent=MS.gene96753.t1 |
| Gene Sequence |
| Protein sequence |
