AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005135.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005135.01.T01 MTR_1g094160 82.051 234 10 5 1 230 2 207 3.42e-119 348
MsG0180005135.01.T01 MTR_1g094165 52.915 223 13 6 270 403 1337 1556 1.83e-49 183
MsG0180005135.01.T01 MTR_8g023010 96.341 82 3 0 270 351 1337 1418 5.23e-43 164
MsG0180005135.01.T01 MTR_8g023010 56.579 76 7 3 352 405 1483 1554 1.07e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005135.01.T01 AT3G10405 52.247 178 57 2 53 230 59 208 6.56e-56 186
MsG0180005135.01.T01 AT2G35630 77.778 81 18 0 271 351 1221 1301 1.12e-34 139
MsG0180005135.01.T01 AT2G35630 55.405 74 8 2 352 403 1370 1440 1.40e-12 70.9
MsG0180005135.01.T01 AT2G35630 77.778 81 18 0 271 351 1331 1411 1.37e-34 139
MsG0180005135.01.T01 AT2G35630 55.405 74 8 2 352 403 1480 1550 1.45e-12 70.9

Find 121 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCCATGGCATTGCCTTC+TGG 0.245404 1:-87464012 None:intergenic
CCACGAATATGTTTCTTATC+TGG 0.245819 1:+87460191 MsG0180005135.01.T01:CDS
CTTATATTGATTAAGGTTCT+TGG 0.262200 1:+87466237 MsG0180005135.01.T01:intron
CCGAACGGGATGGGGATATT+AGG 0.273094 1:+87462380 MsG0180005135.01.T01:CDS
ACTTGGGAATGGAGGAAATT+AGG 0.273106 1:+87465032 MsG0180005135.01.T01:CDS
CTAGGATCCTCAACATTTAT+AGG 0.279112 1:-87458283 None:intergenic
GTTATTATTAGAGTTGAAAA+TGG 0.281416 1:-87457917 None:intergenic
CATGCTTACGCGTTCGCTTT+GGG 0.314036 1:+87459691 MsG0180005135.01.T01:CDS
TTCAAAGTGTCGAGCAGTTC+AGG 0.316425 1:-87461789 None:intergenic
ACATGCATTTGATGCGATTC+AGG 0.323817 1:+87464940 MsG0180005135.01.T01:CDS
AGTGTTGAGCACATATTTAC+AGG 0.332641 1:-87464207 None:intergenic
AAGAAGAAGGAAGGAAAGCC+AGG 0.340196 1:+87462929 MsG0180005135.01.T01:CDS
GAATCTTCAACTAACTCATT+AGG 0.348263 1:-87458250 None:intergenic
GCAAATTGTTGCAAGTTTAA+CGG 0.361949 1:+87462357 MsG0180005135.01.T01:CDS
GTTGATGCTTTCCCTGAAAC+TGG 0.375894 1:+87460242 MsG0180005135.01.T01:CDS
TGCAAGTTTAACGGCCGAAC+GGG 0.377789 1:+87462366 MsG0180005135.01.T01:CDS
ACTCTAATAATAACCTCAAC+TGG 0.380039 1:+87457926 MsG0180005135.01.T01:CDS
CCTAATATCCCCATCCCGTT+CGG 0.380664 1:-87462380 None:intergenic
ACATGCTTACGCGTTCGCTT+TGG 0.381141 1:+87459690 MsG0180005135.01.T01:CDS
TGAACTGCTCGACACTTTGA+AGG 0.385407 1:+87461791 MsG0180005135.01.T01:CDS
TCTTCTATCAACTCATATAG+TGG 0.394763 1:-87460502 None:intergenic
CCTTCTTCTTTCCCATCTCC+CGG 0.396118 1:-87462916 None:intergenic
TTTGCAGGCCTTGTTGTTGT+TGG 0.403165 1:+87458573 MsG0180005135.01.T01:CDS
TGGAACATGAAGGAGGCATT+CGG 0.409372 1:-87457855 None:intergenic
CCATCTGTACTTGCAAGACT+TGG 0.409686 1:+87465015 MsG0180005135.01.T01:CDS
TTGCAGGCCTTGTTGTTGTT+GGG 0.410312 1:+87458574 MsG0180005135.01.T01:CDS
GGAAGCAAAATGATGTCATT+TGG 0.414656 1:+87457790 MsG0180005135.01.T01:exon
GCTATGCAGGTGAGGACATA+TGG 0.417421 1:+87462751 MsG0180005135.01.T01:intron
TAGTGGTTTGTTAGCACTGT+TGG 0.421898 1:-87460485 None:intergenic
GCCACTGGTTATAAAATTCT+CGG 0.428125 1:+87462424 MsG0180005135.01.T01:CDS
AAGGAAAGCCAGGGGAAGCT+AGG 0.437122 1:+87462939 MsG0180005135.01.T01:CDS
TCTTCCTTGCCTTGTAGAGA+AGG 0.438269 1:+87461854 MsG0180005135.01.T01:CDS
CTTACAGGTGGACCATATCT+AGG 0.443659 1:-87458301 None:intergenic
TTGAAAATGGAACAAGAAGA+AGG 0.451288 1:-87457904 None:intergenic
GGAACATGAAGGAGGCATTC+GGG 0.451596 1:-87457854 None:intergenic
ATCCAAGTCAACATCATAGA+TGG 0.452949 1:-87464975 None:intergenic
GTTTAACGGCCGAACGGGAT+GGG 0.464924 1:+87462371 MsG0180005135.01.T01:CDS
CTCGACACTTTGAAGGATGA+AGG 0.466246 1:+87461798 MsG0180005135.01.T01:CDS
GCATTAAATGCACTTGCCAC+TGG 0.470911 1:+87462409 MsG0180005135.01.T01:CDS
AGTGGTTTGTTAGCACTGTT+GGG 0.472960 1:-87460484 None:intergenic
TGTTAGATGATAGATTTAAG+TGG 0.479633 1:+87462811 MsG0180005135.01.T01:CDS
ACTTGACAGGTCCGGGAGAT+GGG 0.487248 1:+87462905 MsG0180005135.01.T01:intron
TTTAACGGCCGAACGGGATG+GGG 0.487537 1:+87462372 MsG0180005135.01.T01:CDS
AAACCTTCAGAGGATGCTCT+TGG 0.490604 1:-87457952 None:intergenic
AGGAAAGCCAGGGGAAGCTA+GGG 0.493499 1:+87462940 MsG0180005135.01.T01:CDS
CCAGATAAGAAACATATTCG+TGG 0.493847 1:-87460191 None:intergenic
CATTGAAACATGGGAAAACA+TGG 0.494004 1:-87457875 None:intergenic
AAAATGATGTCATTTGGCCT+TGG 0.495524 1:+87457796 MsG0180005135.01.T01:exon
CACCATCTATGATGTTGACT+TGG 0.496374 1:+87464973 MsG0180005135.01.T01:CDS
TGATCAAATATGTCAACCTA+TGG 0.496927 1:-87466264 None:intergenic
TGTTTGCCATGAGTTGGCTC+AGG 0.498884 1:+87463978 MsG0180005135.01.T01:CDS
CAAGGGTTTGTCATCAGCAC+CGG 0.499190 1:-87465146 None:intergenic
ACTAAAACCAGCTGTGTTTG+CGG 0.501873 1:+87460453 MsG0180005135.01.T01:CDS
ATTTGTTCCTATAAATGTTG+AGG 0.506384 1:+87458276 MsG0180005135.01.T01:CDS
TAAGGTTCTTGGTTTACCAT+AGG 0.507613 1:+87466248 MsG0180005135.01.T01:intron
AACTTGACAGGTCCGGGAGA+TGG 0.507785 1:+87462904 MsG0180005135.01.T01:intron
GAATCTCTACGAACTGCAGC+TGG 0.510882 1:+87457818 MsG0180005135.01.T01:CDS
CATCATAGATGGTGCTCTGA+AGG 0.512724 1:-87464964 None:intergenic
CCAAGTCTTGCAAGTACAGA+TGG 0.520363 1:-87465015 None:intergenic
CCGGGAGATGGGAAAGAAGA+AGG 0.521720 1:+87462916 MsG0180005135.01.T01:CDS
GAGGACATATGGAGATTTGT+CGG 0.523565 1:+87462762 MsG0180005135.01.T01:CDS
CACGGGAGATCATGAGATGT+TGG 0.526608 1:+87460528 MsG0180005135.01.T01:CDS
GCAAACGGATAAAAGAACTT+AGG 0.527966 1:+87457756 MsG0180005135.01.T01:five_prime_UTR
TAAAACAAACCTTCTCTACA+AGG 0.533487 1:-87461863 None:intergenic
CATCAGAGATGGTCTTGCCC+AGG 0.536735 1:+87466320 MsG0180005135.01.T01:CDS
AGTTTAACGGCCGAACGGGA+TGG 0.536787 1:+87462370 MsG0180005135.01.T01:CDS
AGGACATATGGAGATTTGTC+GGG 0.538105 1:+87462763 MsG0180005135.01.T01:CDS
CGAACGCGTAAGCATGTCCT+TGG 0.539944 1:-87459684 None:intergenic
TTGCAAGTTTAACGGCCGAA+CGG 0.544828 1:+87462365 MsG0180005135.01.T01:CDS
GAAAGTTGTTTGCCATGAGT+TGG 0.544995 1:+87463972 MsG0180005135.01.T01:CDS
CCTACAAATTCATGAACAGA+TGG 0.549363 1:-87459769 None:intergenic
AGAAGAAGGAAGGAAAGCCA+GGG 0.557633 1:+87462930 MsG0180005135.01.T01:CDS
CAAATAAGACAAACCTTCAG+AGG 0.558257 1:-87457962 None:intergenic
AGAGAGTTTAGAAGAGGTCA+AGG 0.558283 1:+87459733 MsG0180005135.01.T01:CDS
AATGTTGAGGATCCTAGATA+TGG 0.565843 1:+87458289 MsG0180005135.01.T01:CDS
ACAAGAGCCGCAAACACAGC+TGG 0.566250 1:-87460460 None:intergenic
CATCCTTTACAGTTCATCCA+TGG 0.569715 1:-87464025 None:intergenic
CATCTGTACTTGCAAGACTT+GGG 0.570295 1:+87465016 MsG0180005135.01.T01:CDS
TGTGCTCAACACTCTCATGC+AGG 0.570704 1:+87464217 MsG0180005135.01.T01:CDS
ATGCTCTTGGAGTCCAGTTG+AGG 0.571918 1:-87457939 None:intergenic
TGCAGTTCGTAGAGATTCCA+AGG 0.572362 1:-87457813 None:intergenic
AGGAGAAGACATTGAAACAT+GGG 0.575410 1:-87457884 None:intergenic
AAAATAGCCCTAGCTTCCCC+TGG 0.577235 1:-87462947 None:intergenic
GTACTTGCAAGACTTGGGAA+TGG 0.582248 1:+87465021 MsG0180005135.01.T01:CDS
TGTTTCTTATCTGGTTTAAG+CGG 0.583734 1:+87460200 MsG0180005135.01.T01:CDS
AGAACTTAGGAAAGTTGCAG+AGG 0.588397 1:+87457769 MsG0180005135.01.T01:five_prime_UTR
CTTGCAAGACTTGGGAATGG+AGG 0.588950 1:+87465024 MsG0180005135.01.T01:CDS
ACTCCAAGAGCATCCTCTGA+AGG 0.589756 1:+87457949 MsG0180005135.01.T01:CDS
TGAGTTGATAGAAGAAATCA+CGG 0.591951 1:+87460510 MsG0180005135.01.T01:CDS
GTAAGTGCGAAATGCCTCGC+TGG 0.592566 1:-87466298 None:intergenic
ACATGAGTAGAAGAAGCAAA+CGG 0.592780 1:+87457741 MsG0180005135.01.T01:five_prime_UTR
CTTATCTGGTTTAAGCGGAG+AGG 0.593073 1:+87460205 MsG0180005135.01.T01:CDS
AAGGAGAAGACATTGAAACA+TGG 0.593929 1:-87457885 None:intergenic
CAAACCTTCTCTACAAGGCA+AGG 0.594063 1:-87461858 None:intergenic
TTTCGCACTTACATCAGAGA+TGG 0.596131 1:+87466309 MsG0180005135.01.T01:CDS
GAAGAAGGAAGGAAAGCCAG+GGG 0.597563 1:+87462931 MsG0180005135.01.T01:CDS
GAGATGGGAAAGAAGAAGGA+AGG 0.598014 1:+87462920 MsG0180005135.01.T01:CDS
TAGTGGCCTGAGCCAACTCA+TGG 0.598511 1:-87463984 None:intergenic
ATTGCCTTCTGGATCACTAG+TGG 0.599135 1:-87464001 None:intergenic
AACACAAGAGAGTTTAGAAG+AGG 0.600712 1:+87459727 MsG0180005135.01.T01:CDS
AGATGATAGATTTAAGTGGA+AGG 0.605205 1:+87462815 MsG0180005135.01.T01:CDS
GGAGATCATGAGATGTTGGT+AGG 0.606238 1:+87460532 MsG0180005135.01.T01:CDS
TATGGTCCACCTGTAAGTCA+TGG 0.608124 1:+87458307 MsG0180005135.01.T01:CDS
TTCAAATCCCAACAACAACA+AGG 0.612190 1:-87458581 None:intergenic
AATTCATGAACAGATGGAGA+GGG 0.615550 1:-87459763 None:intergenic
AACTAACCATGACTTACAGG+TGG 0.624460 1:-87458313 None:intergenic
TGATCCAGAAGGCAATGCCA+TGG 0.624546 1:+87464008 MsG0180005135.01.T01:CDS
GAATGGAGGAAATTAGGAGA+AGG 0.628254 1:+87465038 MsG0180005135.01.T01:CDS
TCGACACTTTGAAGGATGAA+GGG 0.629306 1:+87461799 MsG0180005135.01.T01:CDS
GTTAGAGGGTGAGTTCCTGA+AGG 0.632562 1:+87459159 MsG0180005135.01.T01:CDS
AAATTCATGAACAGATGGAG+AGG 0.641927 1:-87459764 None:intergenic
TGGGAAAACATGGAACATGA+AGG 0.642942 1:-87457865 None:intergenic
TCTGTGATGCAGTCTGTGGA+AGG 0.660836 1:+87463946 MsG0180005135.01.T01:intron
TGATGACAAACCCTTGCGAA+TGG 0.661452 1:+87465153 MsG0180005135.01.T01:CDS
ACTTGTCTATCTGCAATGCA+AGG 0.665324 1:-87460163 None:intergenic
CAGGCCACTAGTGATCCAGA+AGG 0.679761 1:+87463997 MsG0180005135.01.T01:CDS
GTTTGAGTGGGGCTTCATCG+CGG 0.686694 1:+87464183 MsG0180005135.01.T01:intron
GAAAACATGGAACATGAAGG+AGG 0.688873 1:-87457862 None:intergenic
GTAGGTCATCTATTGTACCA+AGG 0.708999 1:+87459667 MsG0180005135.01.T01:intron
GAGTTGATAGAAGAAATCAC+GGG 0.709286 1:+87460511 MsG0180005135.01.T01:CDS
TCAGCTTCAAAATGCCAGCG+AGG 0.741627 1:+87466284 MsG0180005135.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATATAAGATAAATAAA+AGG - Chr1:87466228-87466247 None:intergenic 10.0%
!! TAATGATTGAATTTAATAAA+TGG + Chr1:87461054-87461073 MsG0180005135.01.T01:intron 10.0%
!! TTATTAAATTCAATCATTAT+AGG - Chr1:87461053-87461072 None:intergenic 10.0%
!!! TATTTATCTTATATTGATTA+AGG + Chr1:87466230-87466249 MsG0180005135.01.T01:intron 10.0%
!!! TTTATGTTTTTGTTTTATTA+AGG + Chr1:87463227-87463246 MsG0180005135.01.T01:intron 10.0%
!!! TTTTTTTCATCAATTTATTT+TGG - Chr1:87459614-87459633 None:intergenic 10.0%
!! AAAAATGTTTCAATTTAACA+GGG + Chr1:87465123-87465142 MsG0180005135.01.T01:intron 15.0%
!! ATTGATATTTCGTTATATAT+TGG + Chr1:87463109-87463128 MsG0180005135.01.T01:intron 15.0%
!! ATTTCTAAATGATTTGATTA+AGG - Chr1:87458720-87458739 None:intergenic 15.0%
!! GTACTAACAAATATATTAAT+TGG + Chr1:87459795-87459814 MsG0180005135.01.T01:intron 15.0%
!! TAAAAATGTTTCAATTTAAC+AGG + Chr1:87465122-87465141 MsG0180005135.01.T01:intron 15.0%
!!! GTTTTAACAAATTTGATAAT+TGG + Chr1:87461880-87461899 MsG0180005135.01.T01:intron 15.0%
!!! GTTTTCTTATATCAAATTTA+TGG + Chr1:87459939-87459958 MsG0180005135.01.T01:intron 15.0%
!!! TTAAAATATTCTGAAGATTA+GGG + Chr1:87463287-87463306 MsG0180005135.01.T01:intron 15.0%
!!! TTATTTTAGATATTTATTCC+TGG + Chr1:87462299-87462318 MsG0180005135.01.T01:intron 15.0%
!!! TTGAAATTTTTTACACTATA+AGG + Chr1:87458900-87458919 MsG0180005135.01.T01:intron 15.0%
!! AACTCAGAAAATAATAGAAA+GGG - Chr1:87462506-87462525 None:intergenic 20.0%
!! AATATCTTCATCATTATTTG+TGG + Chr1:87463780-87463799 MsG0180005135.01.T01:intron 20.0%
!! ATATCTTCATCATTATTTGT+GGG + Chr1:87463781-87463800 MsG0180005135.01.T01:intron 20.0%
!! ATCTTTATAAAGAAATGTTG+TGG + Chr1:87458658-87458677 MsG0180005135.01.T01:intron 20.0%
!! CAAAAAAATTTCCACTTTAA+CGG + Chr1:87459316-87459335 MsG0180005135.01.T01:intron 20.0%
!! CTAAAAACTTCAAAGATATA+TGG + Chr1:87460880-87460899 MsG0180005135.01.T01:intron 20.0%
!! GCTTATAGTAAATTACAAAA+TGG + Chr1:87458988-87459007 MsG0180005135.01.T01:intron 20.0%
!! GTAAATTACAAAATGGATAT+AGG + Chr1:87458995-87459014 MsG0180005135.01.T01:intron 20.0%
!! GTTATTATTAGAGTTGAAAA+TGG - Chr1:87457920-87457939 None:intergenic 20.0%
!! TATCTTATACATGAATATGA+TGG + Chr1:87465612-87465631 MsG0180005135.01.T01:intron 20.0%
!! TTAAACTATTTATCCAAACA+TGG + Chr1:87458135-87458154 MsG0180005135.01.T01:intron 20.0%
!!! AATGTGAATTTTTTTTATGC+AGG + Chr1:87460430-87460449 MsG0180005135.01.T01:intron 20.0%
!!! AATTTAAGATTTTTGCTACT+GGG - Chr1:87464811-87464830 None:intergenic 20.0%
!!! ACTATTATACCTTCAAATTT+TGG - Chr1:87459582-87459601 None:intergenic 20.0%
!!! ATTTTTATCATGATACCTTT+TGG + Chr1:87462697-87462716 MsG0180005135.01.T01:intron 20.0%
!!! GTTAAAATATTCTGAAGATT+AGG + Chr1:87463286-87463305 MsG0180005135.01.T01:intron 20.0%
!!! TAATTTAAGATTTTTGCTAC+TGG - Chr1:87464812-87464831 None:intergenic 20.0%
!!! TATTATTTTCTGAGTTGAAA+AGG + Chr1:87462510-87462529 MsG0180005135.01.T01:intron 20.0%
!!! TTTCGTTGTTTTTTTAAATG+CGG - Chr1:87459525-87459544 None:intergenic 20.0%
!!! TTTGAAGTTTTTAGTATGTT+TGG - Chr1:87460874-87460893 None:intergenic 20.0%
!!! TTTTTGTAGATTATCAACTA+AGG + Chr1:87463257-87463276 MsG0180005135.01.T01:intron 20.0%
! AAACGAAGACATAAATTAAC+CGG + Chr1:87463075-87463094 MsG0180005135.01.T01:intron 25.0%
! AAATAAATTGTAGCAAGAGT+TGG + Chr1:87466048-87466067 MsG0180005135.01.T01:intron 25.0%
! AAATACCAAGGATTCAAATA+AGG + Chr1:87460824-87460843 MsG0180005135.01.T01:intron 25.0%
! AACTTTCATGCTATTATACT+TGG + Chr1:87465857-87465876 MsG0180005135.01.T01:intron 25.0%
! AAGATTAATTAGGACAACAA+AGG - Chr1:87464665-87464684 None:intergenic 25.0%
! AATCACTTCATCCATATATA+AGG - Chr1:87462642-87462661 None:intergenic 25.0%
! ACATTTGGAAAATAATACAG+TGG - Chr1:87459085-87459104 None:intergenic 25.0%
! ACTCAGAAAATAATAGAAAG+GGG - Chr1:87462505-87462524 None:intergenic 25.0%
! AGAAGAAATCTGAAAGTAAA+CGG - Chr1:87461408-87461427 None:intergenic 25.0%
! AGATAAAATACGAACATGAA+AGG - Chr1:87459206-87459225 None:intergenic 25.0%
! AGTTTATCTTGAATAAAGTC+AGG + Chr1:87465797-87465816 MsG0180005135.01.T01:intron 25.0%
! ATATCAATGTTCAAACAATC+CGG - Chr1:87463097-87463116 None:intergenic 25.0%
! ATATTTATTCCTGGATTATG+TGG + Chr1:87462308-87462327 MsG0180005135.01.T01:intron 25.0%
! ATATTTCCATACCTCAATAA+CGG - Chr1:87463498-87463517 None:intergenic 25.0%
! ATGAGTCTGTAGTTTAAATA+TGG - Chr1:87462605-87462624 None:intergenic 25.0%
! ATGTTCAATCAATCTAACTT+AGG + Chr1:87458487-87458506 MsG0180005135.01.T01:intron 25.0%
! ATTCAAGATAAACTTAATGC+AGG - Chr1:87465791-87465810 None:intergenic 25.0%
! ATTGTATTCTAATGTCTAGA+AGG + Chr1:87465673-87465692 MsG0180005135.01.T01:intron 25.0%
! ATTTATGCAATTAATTACCC+AGG + Chr1:87461754-87461773 MsG0180005135.01.T01:intron 25.0%
! ATTTATTCTTGATCATCATG+GGG + Chr1:87462231-87462250 MsG0180005135.01.T01:intron 25.0%
! ATTTGTTCCTATAAATGTTG+AGG + Chr1:87458276-87458295 MsG0180005135.01.T01:CDS 25.0%
! CAAATGTTTCCCTTATATAT+TGG + Chr1:87462155-87462174 MsG0180005135.01.T01:intron 25.0%
! CAACTCAGAAAATAATAGAA+AGG - Chr1:87462507-87462526 None:intergenic 25.0%
! CAATATATAAGGGAAACATT+TGG - Chr1:87462157-87462176 None:intergenic 25.0%
! CACAAAAAAGTAACTCAAAT+TGG - Chr1:87458462-87458481 None:intergenic 25.0%
! CACTAAGAAATAATGCATAA+TGG - Chr1:87465491-87465510 None:intergenic 25.0%
! GAAAGAATCAAAAAATACCA+AGG + Chr1:87460812-87460831 MsG0180005135.01.T01:intron 25.0%
! GAATTCAGATGCAAAAAATT+TGG + Chr1:87462671-87462690 MsG0180005135.01.T01:intron 25.0%
! GATTCAAATAAGGTAATTGT+TGG + Chr1:87460834-87460853 MsG0180005135.01.T01:intron 25.0%
! GATTTATTCTTGATCATCAT+GGG + Chr1:87462230-87462249 MsG0180005135.01.T01:intron 25.0%
! GGTCATGATTAATTGATTAT+AGG + Chr1:87459917-87459936 MsG0180005135.01.T01:intron 25.0%
! GTCATTTATGTCCTTATATA+TGG + Chr1:87462628-87462647 MsG0180005135.01.T01:intron 25.0%
! TAGCTTATTCTTAGAAATTG+TGG - Chr1:87461696-87461715 None:intergenic 25.0%
! TCAATGTTAACAAACCAAAA+GGG - Chr1:87460323-87460342 None:intergenic 25.0%
! TCAATGTTTATCACTATCTT+TGG + Chr1:87460571-87460590 MsG0180005135.01.T01:intron 25.0%
! TGTAGCTTATTGCATTATTT+AGG - Chr1:87459400-87459419 None:intergenic 25.0%
! TGTTAGATGATAGATTTAAG+TGG + Chr1:87462811-87462830 MsG0180005135.01.T01:CDS 25.0%
! TTATTCTTAGAAATTGTGGT+TGG - Chr1:87461692-87461711 None:intergenic 25.0%
! TTCAAGATAAACTTAATGCA+GGG - Chr1:87465790-87465809 None:intergenic 25.0%
! TTCAATGTTAACAAACCAAA+AGG - Chr1:87460324-87460343 None:intergenic 25.0%
! TTGGTCTATATGAACTTTAT+CGG + Chr1:87466113-87466132 MsG0180005135.01.T01:intron 25.0%
! TTTAGTAGACTATAATGTGA+AGG - Chr1:87465708-87465727 None:intergenic 25.0%
!! AATTACCTTATTTGAATCCT+TGG - Chr1:87460832-87460851 None:intergenic 25.0%
!! AGACTTGATCTTTAAAAACT+TGG + Chr1:87464905-87464924 MsG0180005135.01.T01:CDS 25.0%
!! AGTTGCTCTATCAATAATTT+TGG - Chr1:87458876-87458895 None:intergenic 25.0%
!! ATGCATTATTTCTTAGTGTT+TGG + Chr1:87465493-87465512 MsG0180005135.01.T01:intron 25.0%
!! CAGTATTATTGATAATTGAC+TGG + Chr1:87464834-87464853 MsG0180005135.01.T01:intron 25.0%
!! CTTATATTGATTAAGGTTCT+TGG + Chr1:87466237-87466256 MsG0180005135.01.T01:intron 25.0%
!! GATAATTTTATGATGCCTTA+AGG + Chr1:87465634-87465653 MsG0180005135.01.T01:intron 25.0%
!! GTTGCTCTATCAATAATTTT+GGG - Chr1:87458875-87458894 None:intergenic 25.0%
!! TAAATGTTTCTAATGTTCCA+AGG + Chr1:87460055-87460074 MsG0180005135.01.T01:intron 25.0%
!! TGCATTATTTCTTAGTGTTT+GGG + Chr1:87465494-87465513 MsG0180005135.01.T01:intron 25.0%
!! TTAGTAGTTAAAAGCATACT+AGG + Chr1:87465883-87465902 MsG0180005135.01.T01:intron 25.0%
!! TTTCTAAGAATAAGCTATCA+TGG + Chr1:87461699-87461718 MsG0180005135.01.T01:intron 25.0%
!! TTTGTCAGTTTAGTAACTTT+TGG + Chr1:87461941-87461960 MsG0180005135.01.T01:intron 25.0%
!! TTTTCAGAATGATATGATGA+TGG + Chr1:87461082-87461101 MsG0180005135.01.T01:intron 25.0%
!!! TATTAGCAGTGTACTTTTTT+TGG - Chr1:87463568-87463587 None:intergenic 25.0%
!!! TATTTTGCTCTTTGTTTGAA+AGG + Chr1:87464512-87464531 MsG0180005135.01.T01:intron 25.0%
!!! TGTGCTAATCTTTTTTTTGA+AGG - Chr1:87464326-87464345 None:intergenic 25.0%
!!! TTTCTTTTGCTATTTCAAAC+AGG + Chr1:87464139-87464158 MsG0180005135.01.T01:intron 25.0%
!!! TTTGAGTTACTTTTTTGTGA+AGG + Chr1:87458463-87458482 MsG0180005135.01.T01:intron 25.0%
!!! TTTTTGTTTATTCAGACTGT+TGG - Chr1:87459302-87459321 None:intergenic 25.0%
!!! TTTTTTTGAAGGTCTGTAAA+GGG - Chr1:87464315-87464334 None:intergenic 25.0%
!!! TTTTTTTTGAAGGTCTGTAA+AGG - Chr1:87464316-87464335 None:intergenic 25.0%
AAAAACTAACCATGACTTAC+AGG - Chr1:87458319-87458338 None:intergenic 30.0%
AACAGAAGACAATGAATGTT+AGG - Chr1:87466014-87466033 None:intergenic 30.0%
AACATATTGCATTGCATTGT+AGG + Chr1:87459649-87459668 MsG0180005135.01.T01:intron 30.0%
AACTGCTGTCAAAAATTACA+AGG - Chr1:87459854-87459873 None:intergenic 30.0%
AAGATTAAGTTCAAGTAAGC+AGG - Chr1:87465276-87465295 None:intergenic 30.0%
AATCAACGTGTGAAACAATT+CGG - Chr1:87460288-87460307 None:intergenic 30.0%
AATCTGTGACCAAAATTTGA+AGG + Chr1:87459570-87459589 MsG0180005135.01.T01:intron 30.0%
ACAATGCAATGCAATATGTT+AGG - Chr1:87459649-87459668 None:intergenic 30.0%
ACTATTTATCCAAACATGGA+TGG + Chr1:87458139-87458158 MsG0180005135.01.T01:intron 30.0%
ACTCTAATAATAACCTCAAC+TGG + Chr1:87457926-87457945 MsG0180005135.01.T01:CDS 30.0%
ACTGCTGTCAAAAATTACAA+GGG - Chr1:87459853-87459872 None:intergenic 30.0%
ACTTCATAACCAAAGAACAT+AGG - Chr1:87461434-87461453 None:intergenic 30.0%
AGATGATAGATTTAAGTGGA+AGG + Chr1:87462815-87462834 MsG0180005135.01.T01:CDS 30.0%
AGGTAAATGCATATAAAGTG+AGG - Chr1:87458431-87458450 None:intergenic 30.0%
AGTAAAATCCTATTCATAGC+TGG + Chr1:87459243-87459262 MsG0180005135.01.T01:intron 30.0%
AGTCTGTAGTTTAAATATGG+AGG - Chr1:87462602-87462621 None:intergenic 30.0%
ATAAGTTGCTAATCCAAACA+TGG - Chr1:87461465-87461484 None:intergenic 30.0%
ATAGATACATGATACATCGT+TGG + Chr1:87463858-87463877 MsG0180005135.01.T01:intron 30.0%
ATCATCTGCTTATTAATGTC+AGG + Chr1:87463597-87463616 MsG0180005135.01.T01:intron 30.0%
ATGTTACAATTACAGCATGA+AGG + Chr1:87458940-87458959 MsG0180005135.01.T01:intron 30.0%
ATGTTTCCCTTATATATTGG+AGG + Chr1:87462158-87462177 MsG0180005135.01.T01:intron 30.0%
ATTCAAATGCTTTCAACAAC+TGG - Chr1:87464440-87464459 None:intergenic 30.0%
ATTCTGTAATTGTTGCAGTT+AGG + Chr1:87462061-87462080 MsG0180005135.01.T01:intron 30.0%
ATTGCTACAAAGTTCTTGAT+TGG - Chr1:87460015-87460034 None:intergenic 30.0%
ATTTATGAGCTATGCTTTAC+TGG + Chr1:87460784-87460803 MsG0180005135.01.T01:intron 30.0%
ATTTCAGAGAGGATTTACAT+AGG + Chr1:87461106-87461125 MsG0180005135.01.T01:intron 30.0%
ATTTGCATGAATTGTTAAGC+AGG + Chr1:87459893-87459912 MsG0180005135.01.T01:intron 30.0%
CAACACAACATGTCTATTAA+AGG + Chr1:87461354-87461373 MsG0180005135.01.T01:intron 30.0%
CAATATACCCTGAAGAAAAA+CGG - Chr1:87464254-87464273 None:intergenic 30.0%
CAATTAATCAGAGCAATGAT+TGG - Chr1:87458834-87458853 None:intergenic 30.0%
CTATCTATCATATGGAAACA+TGG + Chr1:87457992-87458011 MsG0180005135.01.T01:intron 30.0%
CTGCAATATTTAAGAAGATG+GGG + Chr1:87466071-87466090 MsG0180005135.01.T01:intron 30.0%
CTTACTTGAACTTAATCTTG+AGG + Chr1:87465277-87465296 MsG0180005135.01.T01:intron 30.0%
CTTTACAAGTTCAATGAAGA+TGG - Chr1:87462471-87462490 None:intergenic 30.0%
GAATCTTCAACTAACTCATT+AGG - Chr1:87458253-87458272 None:intergenic 30.0%
GAGTGTATCTATCTATCATA+TGG + Chr1:87457984-87458003 MsG0180005135.01.T01:intron 30.0%
GATGAATGCTTATGCTATAA+GGG - Chr1:87461494-87461513 None:intergenic 30.0%
GATTATCATATCCTATTGCA+TGG - Chr1:87458641-87458660 None:intergenic 30.0%
GCAAATTGTTGCAAGTTTAA+CGG + Chr1:87462357-87462376 MsG0180005135.01.T01:CDS 30.0%
GCTGCAATATTTAAGAAGAT+GGG + Chr1:87466070-87466089 MsG0180005135.01.T01:intron 30.0%
GGATTTATTCTTGATCATCA+TGG + Chr1:87462229-87462248 MsG0180005135.01.T01:intron 30.0%
GTAAAATCCTATTCATAGCT+GGG + Chr1:87459244-87459263 MsG0180005135.01.T01:intron 30.0%
GTAGATTATCAACTAAGGTA+AGG + Chr1:87463262-87463281 MsG0180005135.01.T01:intron 30.0%
TAAAACAAACCTTCTCTACA+AGG - Chr1:87461866-87461885 None:intergenic 30.0%
TCATTCATGCATAGAAAATG+TGG - Chr1:87460373-87460392 None:intergenic 30.0%
TCTTCTATCAACTCATATAG+TGG - Chr1:87460505-87460524 None:intergenic 30.0%
TGATCAAATATGTCAACCTA+TGG - Chr1:87466267-87466286 None:intergenic 30.0%
TGATGAATGCTTATGCTATA+AGG - Chr1:87461495-87461514 None:intergenic 30.0%
TGCAATATTTAAGAAGATGG+GGG + Chr1:87466072-87466091 MsG0180005135.01.T01:intron 30.0%
TGGTTATAAAATTCTCGGTA+TGG + Chr1:87462429-87462448 MsG0180005135.01.T01:intron 30.0%
TGTTTCCCTTATATATTGGA+GGG + Chr1:87462159-87462178 MsG0180005135.01.T01:intron 30.0%
TTCACATATCAATAAACCTC+TGG + Chr1:87466195-87466214 MsG0180005135.01.T01:intron 30.0%
TTCTGTAATTGTTGCAGTTA+GGG + Chr1:87462062-87462081 MsG0180005135.01.T01:intron 30.0%
TTGAAAATGGAACAAGAAGA+AGG - Chr1:87457907-87457926 None:intergenic 30.0%
! AGAAAGTACGTGAAAAAATG+CGG + Chr1:87462095-87462114 MsG0180005135.01.T01:intron 30.0%
! AGAATTGCCAATTTTCAAAG+TGG - Chr1:87463830-87463849 None:intergenic 30.0%
! AGGATTTTACTCATTGATCT+TGG - Chr1:87459234-87459253 None:intergenic 30.0%
! ATAAGATGTTTGTTACCTTC+AGG - Chr1:87459177-87459196 None:intergenic 30.0%
! CTTTGGTTATGAAGTGTTTA+TGG + Chr1:87461439-87461458 MsG0180005135.01.T01:intron 30.0%
! TAGTCATCCACTTTGAAAAT+TGG + Chr1:87463820-87463839 MsG0180005135.01.T01:intron 30.0%
! TGAAGCAGATGAACATTTTA+AGG + Chr1:87458600-87458619 MsG0180005135.01.T01:CDS 30.0%
! TGTATTGATGCTTAAGATTC+TGG + Chr1:87464459-87464478 MsG0180005135.01.T01:intron 30.0%
! TGTTTCTTATCTGGTTTAAG+CGG + Chr1:87460200-87460219 MsG0180005135.01.T01:CDS 30.0%
! TTTTATCAATCATGCCCTTT+TGG + Chr1:87460306-87460325 MsG0180005135.01.T01:intron 30.0%
!! ACAGTTTTTGAAAGAGTTAG+AGG + Chr1:87459144-87459163 MsG0180005135.01.T01:CDS 30.0%
!! ATGTATTTCCGTTTTTCTTC+AGG + Chr1:87464243-87464262 MsG0180005135.01.T01:intron 30.0%
!! CAGTTTTTGAAAGAGTTAGA+GGG + Chr1:87459145-87459164 MsG0180005135.01.T01:CDS 30.0%
!! GATTTTAAGAAGCAAGTTGA+TGG + Chr1:87461144-87461163 MsG0180005135.01.T01:intron 30.0%
!! TAAGTCAATCTCTGTTTCTA+TGG + Chr1:87463375-87463394 MsG0180005135.01.T01:intron 30.0%
!! TCAAATTTTGGTCACAGATT+GGG - Chr1:87459570-87459589 None:intergenic 30.0%
!! TGAGTTGATAGAAGAAATCA+CGG + Chr1:87460510-87460529 MsG0180005135.01.T01:CDS 30.0%
!! TGTATTTCCGTTTTTCTTCA+GGG + Chr1:87464244-87464263 MsG0180005135.01.T01:intron 30.0%
!! TTCAAATTTTGGTCACAGAT+TGG - Chr1:87459571-87459590 None:intergenic 30.0%
!! TTTTCTGAGTTGAAAAGGAA+AGG + Chr1:87462515-87462534 MsG0180005135.01.T01:intron 30.0%
!!! ACTTTTGATTTCAGTTTGAG+TGG + Chr1:87464170-87464189 MsG0180005135.01.T01:intron 30.0%
!!! CTTTTGATTTCAGTTTGAGT+GGG + Chr1:87464171-87464190 MsG0180005135.01.T01:intron 30.0%
!!! TGTTATTTTGCTTATCATGC+AGG + Chr1:87458223-87458242 MsG0180005135.01.T01:intron 30.0%
!!! TTTTGATTTCAGTTTGAGTG+GGG + Chr1:87464172-87464191 MsG0180005135.01.T01:intron 30.0%
!!! TTTTTTCCTATTCCCAGTTT+GGG + Chr1:87463883-87463902 MsG0180005135.01.T01:intron 30.0%
!!! TTTTTTGAAGGTCTGTAAAG+GGG - Chr1:87464314-87464333 None:intergenic 30.0%
AAAAACTCATCCACACCTTA+AGG - Chr1:87465652-87465671 None:intergenic 35.0%
AAAGAGAGGAGAAATGAAGA+AGG - Chr1:87462852-87462871 None:intergenic 35.0%
AAATTCATGAACAGATGGAG+AGG - Chr1:87459767-87459786 None:intergenic 35.0%
AACACAAGAGAGTTTAGAAG+AGG + Chr1:87459727-87459746 MsG0180005135.01.T01:CDS 35.0%
AACTCAAATTGGACTCTCAA+AGG - Chr1:87458451-87458470 None:intergenic 35.0%
AAGACGTAGTTGTTATGCAT+CGG - Chr1:87459354-87459373 None:intergenic 35.0%
AAGGAGAAGACATTGAAACA+TGG - Chr1:87457888-87457907 None:intergenic 35.0%
AAGTAAACGGTGAAAACAGA+AGG - Chr1:87461395-87461414 None:intergenic 35.0%
AATAAAAGGATACAAGCCAG+AGG - Chr1:87466214-87466233 None:intergenic 35.0%
AATAAAGGGTCATCTCTCAA+TGG + Chr1:87465219-87465238 MsG0180005135.01.T01:intron 35.0%
AATAGAAAATGCCATGCCTA+AGG - Chr1:87465554-87465573 None:intergenic 35.0%
AATGCCTATCAAGCTTACAA+AGG + Chr1:87464775-87464794 MsG0180005135.01.T01:intron 35.0%
AATGTTGAGGATCCTAGATA+TGG + Chr1:87458289-87458308 MsG0180005135.01.T01:CDS 35.0%
AATTCATGAACAGATGGAGA+GGG - Chr1:87459766-87459785 None:intergenic 35.0%
AATTTGAGCACCAACTTTCA+AGG - Chr1:87458193-87458212 None:intergenic 35.0%
ACACTTAATTCGATACCTCT+GGG - Chr1:87466153-87466172 None:intergenic 35.0%
ACATGAGTAGAAGAAGCAAA+CGG + Chr1:87457741-87457760 MsG0180005135.01.T01:five_prime_UTR 35.0%
ACTTCTGCACAAAACTCATA+TGG + Chr1:87458393-87458412 MsG0180005135.01.T01:intron 35.0%
AGGAGAAGACATTGAAACAT+GGG - Chr1:87457887-87457906 None:intergenic 35.0%
AGTAAACGGTGAAAACAGAA+GGG - Chr1:87461394-87461413 None:intergenic 35.0%
AGTCCATATCGGACAAAATA+TGG + Chr1:87461603-87461622 MsG0180005135.01.T01:intron 35.0%
ATAAGGGAAACATTTGGATG+CGG - Chr1:87462151-87462170 None:intergenic 35.0%
ATATCCTATTGCATGGATGA+TGG - Chr1:87458634-87458653 None:intergenic 35.0%
ATCCAAGTCAACATCATAGA+TGG - Chr1:87464978-87464997 None:intergenic 35.0%
ATGCAGCATATCAAAAAGAG+AGG - Chr1:87462866-87462885 None:intergenic 35.0%
ATGTTCTTGCTTCAATTACC+AGG + Chr1:87463423-87463442 MsG0180005135.01.T01:intron 35.0%
ATGTTTCAATTTAACAGGGC+CGG + Chr1:87465127-87465146 MsG0180005135.01.T01:intron 35.0%
ATTACCATCATCCATGCAAT+AGG + Chr1:87458627-87458646 MsG0180005135.01.T01:intron 35.0%
ATTAGGGAATAGATGAGGAA+AGG + Chr1:87463303-87463322 MsG0180005135.01.T01:intron 35.0%
ATTCAAACGTAGTTAACTGC+AGG + Chr1:87458538-87458557 MsG0180005135.01.T01:intron 35.0%
CAAATAAGACAAACCTTCAG+AGG - Chr1:87457965-87457984 None:intergenic 35.0%
CATTGAAACATGGGAAAACA+TGG - Chr1:87457878-87457897 None:intergenic 35.0%
CCAAACTTCTATAACTTCCT+TGG - Chr1:87461294-87461313 None:intergenic 35.0%
CCAAGGAAGTTATAGAAGTT+TGG + Chr1:87461291-87461310 MsG0180005135.01.T01:intron 35.0%
CCACGAATATGTTTCTTATC+TGG + Chr1:87460191-87460210 MsG0180005135.01.T01:CDS 35.0%
CCAGATAAGAAACATATTCG+TGG - Chr1:87460194-87460213 None:intergenic 35.0%
CCATCTGTTCATGAATTTGT+AGG + Chr1:87459769-87459788 MsG0180005135.01.T01:intron 35.0%
CCTACAAATTCATGAACAGA+TGG - Chr1:87459772-87459791 None:intergenic 35.0%
CTACGATTGAATGACACATT+TGG - Chr1:87459100-87459119 None:intergenic 35.0%
CTAGGATCCTCAACATTTAT+AGG - Chr1:87458286-87458305 None:intergenic 35.0%
CTGTAGTTTAAATATGGAGG+AGG - Chr1:87462599-87462618 None:intergenic 35.0%
CTTAGGACCAAAACTTAGAA+CGG + Chr1:87458504-87458523 MsG0180005135.01.T01:intron 35.0%
CTTCTCACAAAAGCTAGATA+GGG - Chr1:87463141-87463160 None:intergenic 35.0%
CTTCTGCACAAAACTCATAT+GGG + Chr1:87458394-87458413 MsG0180005135.01.T01:intron 35.0%
CTTGAACTTAATCTTGAGGT+AGG + Chr1:87465281-87465300 MsG0180005135.01.T01:intron 35.0%
GCAAACGGATAAAAGAACTT+AGG + Chr1:87457756-87457775 MsG0180005135.01.T01:five_prime_UTR 35.0%
GCGGACGTAAAAGATTAATT+AGG - Chr1:87464675-87464694 None:intergenic 35.0%
GGAAGCAAAATGATGTCATT+TGG + Chr1:87457790-87457809 MsG0180005135.01.T01:exon 35.0%
GGCTGCAATATTTAAGAAGA+TGG + Chr1:87466069-87466088 MsG0180005135.01.T01:intron 35.0%
GTTACCTTTGTAAGCTTGAT+AGG - Chr1:87464782-87464801 None:intergenic 35.0%
GTTTCCCTTATATATTGGAG+GGG + Chr1:87462160-87462179 MsG0180005135.01.T01:intron 35.0%
TAAGGTTCTTGGTTTACCAT+AGG + Chr1:87466248-87466267 MsG0180005135.01.T01:intron 35.0%
TACACTTAATTCGATACCTC+TGG - Chr1:87466154-87466173 None:intergenic 35.0%
TACTCTCATTCCTTGAAAGT+TGG + Chr1:87458180-87458199 MsG0180005135.01.T01:intron 35.0%
TATGGACTCTTCAACACTTA+TGG - Chr1:87461591-87461610 None:intergenic 35.0%
TCATAACCAAAGAACATAGG+AGG - Chr1:87461431-87461450 None:intergenic 35.0%
TCTGCATCATTTAGTTGACT+TGG + Chr1:87462561-87462580 MsG0180005135.01.T01:intron 35.0%
TCTTCTCACAAAAGCTAGAT+AGG - Chr1:87463142-87463161 None:intergenic 35.0%
TGAAAGGAAACGTCATATCA+TGG + Chr1:87464528-87464547 MsG0180005135.01.T01:intron 35.0%
TGAAGATTAGGGAATAGATG+AGG + Chr1:87463298-87463317 MsG0180005135.01.T01:intron 35.0%
TGACTAGCAATCATCATTAC+AGG + Chr1:87464619-87464638 MsG0180005135.01.T01:intron 35.0%
TGATTTCTCTCCAAACAAAG+AGG - Chr1:87464106-87464125 None:intergenic 35.0%
TGCTGAATCATTCCAATGTT+TGG - Chr1:87465419-87465438 None:intergenic 35.0%
TGGACACACACTTAATTCAA+CGG - Chr1:87458783-87458802 None:intergenic 35.0%
TGTCTCTCAATGTTACTATC+AGG - Chr1:87463638-87463657 None:intergenic 35.0%
TGTGAGTAGTGAACTTTCTT+GGG + Chr1:87461986-87462005 MsG0180005135.01.T01:intron 35.0%
TTCAAACGTAGTTAACTGCA+GGG + Chr1:87458539-87458558 MsG0180005135.01.T01:intron 35.0%
TTCAAATCCCAACAACAACA+AGG - Chr1:87458584-87458603 None:intergenic 35.0%
TTCAGCTTATTTCCATGAGT+TGG + Chr1:87458039-87458058 MsG0180005135.01.T01:intron 35.0%
TTCATAAGTGATCCAACTCA+TGG - Chr1:87458054-87458073 None:intergenic 35.0%
TTCATGTACGTTGATCAGAA+TGG - Chr1:87458803-87458822 None:intergenic 35.0%
TTCTATAACTTCCTTGGCAA+TGG - Chr1:87461288-87461307 None:intergenic 35.0%
TTCTGCACAAAACTCATATG+GGG + Chr1:87458395-87458414 MsG0180005135.01.T01:intron 35.0%
TTGAGCAAATCAAGATCTTG+AGG + Chr1:87460978-87460997 MsG0180005135.01.T01:intron 35.0%
! AAAATGATGTCATTTGGCCT+TGG + Chr1:87457796-87457815 MsG0180005135.01.T01:exon 35.0%
! AAGCCATATTTTGTCCGATA+TGG - Chr1:87461609-87461628 None:intergenic 35.0%
! AATTGAATGTGCTGATCTTG+TGG + Chr1:87462208-87462227 MsG0180005135.01.T01:intron 35.0%
! ACAATCTTTTGCCGTTAAAG+TGG - Chr1:87459330-87459349 None:intergenic 35.0%
! ACCGAGAATTTTATAACCAG+TGG - Chr1:87462428-87462447 None:intergenic 35.0%
! AGGTAGGCATTAGATTTTTG+GGG + Chr1:87465297-87465316 MsG0180005135.01.T01:intron 35.0%
! AGTGTTGAGCACATATTTAC+AGG - Chr1:87464210-87464229 None:intergenic 35.0%
! CAATGAAGATGGATTTGTGA+GGG - Chr1:87462460-87462479 None:intergenic 35.0%
! CTGCATCATTTAGTTGACTT+GGG + Chr1:87462562-87462581 MsG0180005135.01.T01:intron 35.0%
! GAAAGTACGTGAAAAAATGC+GGG + Chr1:87462096-87462115 MsG0180005135.01.T01:intron 35.0%
! GAAGTTTGGACATTCTTTTG+AGG + Chr1:87461305-87461324 MsG0180005135.01.T01:intron 35.0%
! GAGGTAGGCATTAGATTTTT+GGG + Chr1:87465296-87465315 MsG0180005135.01.T01:intron 35.0%
! GCACTGGACATTATTTCTTT+CGG + Chr1:87463711-87463730 MsG0180005135.01.T01:intron 35.0%
! GCCACTGGTTATAAAATTCT+CGG + Chr1:87462424-87462443 MsG0180005135.01.T01:CDS 35.0%
! TCAATGAAGATGGATTTGTG+AGG - Chr1:87462461-87462480 None:intergenic 35.0%
! TGAGGTAGGCATTAGATTTT+TGG + Chr1:87465295-87465314 MsG0180005135.01.T01:intron 35.0%
! TTAAGATTTTTGCTACTGGG+TGG - Chr1:87464808-87464827 None:intergenic 35.0%
! TTGGTGGGGGTTTTTATATA+GGG - Chr1:87463549-87463568 None:intergenic 35.0%
! TTTGGTGGGGGTTTTTATAT+AGG - Chr1:87463550-87463569 None:intergenic 35.0%
! TTTTATGATGCCTTAAGGTG+TGG + Chr1:87465639-87465658 MsG0180005135.01.T01:intron 35.0%
!! AAGTGTTGAAGAGTCCATAT+CGG + Chr1:87461592-87461611 MsG0180005135.01.T01:intron 35.0%
!! ATCTTGATTTGCTCAATTCG+TGG - Chr1:87460974-87460993 None:intergenic 35.0%
!! ATGATGATGGTATTTCAGAG+AGG + Chr1:87461095-87461114 MsG0180005135.01.T01:intron 35.0%
!! CAAATTTTGGTCACAGATTG+GGG - Chr1:87459569-87459588 None:intergenic 35.0%
!! GAGTTGATAGAAGAAATCAC+GGG + Chr1:87460511-87460530 MsG0180005135.01.T01:CDS 35.0%
!!! AGATTTTGGTTACCAGTTTC+AGG - Chr1:87460257-87460276 None:intergenic 35.0%
!!! AGCAGTGTACTTTTTTTGGT+GGG - Chr1:87463564-87463583 None:intergenic 35.0%
!!! AGGGGTTTCTTTTATTTTGC+AGG + Chr1:87458558-87458577 MsG0180005135.01.T01:intron 35.0%
!!! GATTTTGGTTACCAGTTTCA+GGG - Chr1:87460256-87460275 None:intergenic 35.0%
!!! GTTTTTTCCTATTCCCAGTT+TGG + Chr1:87463882-87463901 MsG0180005135.01.T01:intron 35.0%
!!! TAGCAGTGTACTTTTTTTGG+TGG - Chr1:87463565-87463584 None:intergenic 35.0%
AACTAACCATGACTTACAGG+TGG - Chr1:87458316-87458335 None:intergenic 40.0%
AATCTTCTACTGCACATCAC+AGG + Chr1:87461253-87461272 MsG0180005135.01.T01:intron 40.0%
AATTTCTGTGATGCAGTCTG+TGG + Chr1:87463942-87463961 MsG0180005135.01.T01:intron 40.0%
ACAACCAGATCAGAAACTTC+TGG - Chr1:87464753-87464772 None:intergenic 40.0%
ACATGCATTTGATGCGATTC+AGG + Chr1:87464940-87464959 MsG0180005135.01.T01:CDS 40.0%
ACTAAAACCAGCTGTGTTTG+CGG + Chr1:87460453-87460472 MsG0180005135.01.T01:CDS 40.0%
ACTATCTTGCCTTATCTGCA+AGG - Chr1:87464070-87464089 None:intergenic 40.0%
ACTTGGGAATGGAGGAAATT+AGG + Chr1:87465032-87465051 MsG0180005135.01.T01:CDS 40.0%
ACTTGTCTATCTGCAATGCA+AGG - Chr1:87460166-87460185 None:intergenic 40.0%
AGAACTTAGGAAAGTTGCAG+AGG + Chr1:87457769-87457788 MsG0180005135.01.T01:five_prime_UTR 40.0%
AGAGAGTTTAGAAGAGGTCA+AGG + Chr1:87459733-87459752 MsG0180005135.01.T01:CDS 40.0%
AGGACATATGGAGATTTGTC+GGG + Chr1:87462763-87462782 MsG0180005135.01.T01:CDS 40.0%
AGTGCTTCATTCCAATCAGT+GGG - Chr1:87463696-87463715 None:intergenic 40.0%
AGTTCAAGTAAGCAGGATGA+TGG - Chr1:87465269-87465288 None:intergenic 40.0%
AGTTTCATGCCTTGCAGATA+AGG + Chr1:87464058-87464077 MsG0180005135.01.T01:intron 40.0%
ATAACTTCCTTGGCAATGGA+TGG - Chr1:87461284-87461303 None:intergenic 40.0%
ATATGCTGCATTACCGATGA+AGG + Chr1:87462875-87462894 MsG0180005135.01.T01:intron 40.0%
ATGCCATGGATGAACTGTAA+AGG + Chr1:87464022-87464041 MsG0180005135.01.T01:intron 40.0%
ATGGACTTGAAATTCTGCAG+AGG + Chr1:87461163-87461182 MsG0180005135.01.T01:intron 40.0%
ATGGCTTGAACATGTGTTGT+GGG + Chr1:87461622-87461641 MsG0180005135.01.T01:intron 40.0%
CAAAAGAGAGATCGAGGAAA+AGG - Chr1:87458756-87458775 None:intergenic 40.0%
CAGCAACAATAATTCAGTGC+TGG + Chr1:87465434-87465453 MsG0180005135.01.T01:intron 40.0%
CATCCTTTACAGTTCATCCA+TGG - Chr1:87464028-87464047 None:intergenic 40.0%
CATCTGTACTTGCAAGACTT+GGG + Chr1:87465016-87465035 MsG0180005135.01.T01:CDS 40.0%
CTAATCTGTCCACATAATCC+AGG - Chr1:87462320-87462339 None:intergenic 40.0%
CTCATTACTGAGCTTCTTCT+GGG + Chr1:87464374-87464393 MsG0180005135.01.T01:intron 40.0%
CTGTGAGTAGTGAACTTTCT+TGG + Chr1:87461985-87462004 MsG0180005135.01.T01:intron 40.0%
GAAAACATGGAACATGAAGG+AGG - Chr1:87457865-87457884 None:intergenic 40.0%
GAAACCAGAAGTTTCTGATC+TGG + Chr1:87464746-87464765 MsG0180005135.01.T01:intron 40.0%
GAAAGTTGTTTGCCATGAGT+TGG + Chr1:87463972-87463991 MsG0180005135.01.T01:CDS 40.0%
GAACTGTAAAGGATGCAGAT+AGG + Chr1:87464033-87464052 MsG0180005135.01.T01:intron 40.0%
GAATGGAGGAAATTAGGAGA+AGG + Chr1:87465038-87465057 MsG0180005135.01.T01:CDS 40.0%
GAGAAGCAAACTTGCACAAT+TGG + Chr1:87466094-87466113 MsG0180005135.01.T01:intron 40.0%
GAGGACATATGGAGATTTGT+CGG + Chr1:87462762-87462781 MsG0180005135.01.T01:CDS 40.0%
GATTACTCAATTGTACCCAG+AGG + Chr1:87466135-87466154 MsG0180005135.01.T01:intron 40.0%
GCAACCCCTCCAATATATAA+GGG - Chr1:87462167-87462186 None:intergenic 40.0%
GCATAATGGTACCTTCAACT+GGG - Chr1:87465477-87465496 None:intergenic 40.0%
GGACACACACTTAATTCAAC+GGG - Chr1:87458782-87458801 None:intergenic 40.0%
GGATTATGTGGACAGATTAG+TGG + Chr1:87462320-87462339 MsG0180005135.01.T01:intron 40.0%
GTAGGTCATCTATTGTACCA+AGG + Chr1:87459667-87459686 MsG0180005135.01.T01:intron 40.0%
GTCGATAACTCCTCTTTGTT+TGG + Chr1:87464093-87464112 MsG0180005135.01.T01:intron 40.0%
GTTCAAGTAAGCAGGATGAT+GGG - Chr1:87465268-87465287 None:intergenic 40.0%
TACACTTGAACTTCAGACTC+TGG + Chr1:87465356-87465375 MsG0180005135.01.T01:intron 40.0%
TATGGCTTGAACATGTGTTG+TGG + Chr1:87461621-87461640 MsG0180005135.01.T01:intron 40.0%
TCAAACGTAGTTAACTGCAG+GGG + Chr1:87458540-87458559 MsG0180005135.01.T01:intron 40.0%
TCAAGAGTAAACATTCCGTC+CGG - Chr1:87463201-87463220 None:intergenic 40.0%
TCAAGTTACACCACCTTCAT+CGG - Chr1:87462891-87462910 None:intergenic 40.0%
TCTCATTACTGAGCTTCTTC+TGG + Chr1:87464373-87464392 MsG0180005135.01.T01:intron 40.0%
TCTGCACAAAACTCATATGG+GGG + Chr1:87458396-87458415 MsG0180005135.01.T01:intron 40.0%
TCTTCTCCTCCTATGTTCTT+TGG + Chr1:87461422-87461441 MsG0180005135.01.T01:intron 40.0%
TGCATAATGGTACCTTCAAC+TGG - Chr1:87465478-87465497 None:intergenic 40.0%
TGCATGAATGATAGATCTGC+TGG + Chr1:87460382-87460401 MsG0180005135.01.T01:intron 40.0%
TGCATGAATTGTTAAGCAGG+TGG + Chr1:87459896-87459915 MsG0180005135.01.T01:intron 40.0%
TGGACTTGAAATTCTGCAGA+GGG + Chr1:87461164-87461183 MsG0180005135.01.T01:intron 40.0%
TGGGAAAACATGGAACATGA+AGG - Chr1:87457868-87457887 None:intergenic 40.0%
TTTCGCACTTACATCAGAGA+TGG + Chr1:87466309-87466328 MsG0180005135.01.T01:CDS 40.0%
! AACAGTTTTCACCATTCGCA+AGG - Chr1:87465167-87465186 None:intergenic 40.0%
! AAGCTATCATGGAGAGCATA+TGG + Chr1:87461710-87461729 MsG0180005135.01.T01:intron 40.0%
! ACAGTTTTCACCATTCGCAA+GGG - Chr1:87465166-87465185 None:intergenic 40.0%
! ACCATTTTCCAAACCCAAAC+TGG - Chr1:87463899-87463918 None:intergenic 40.0%
! ACGCAAATTTTCTCACATGC+AGG + Chr1:87460906-87460925 MsG0180005135.01.T01:intron 40.0%
! ATGTTCCAAGGCCTTTTTAG+CGG + Chr1:87460067-87460086 MsG0180005135.01.T01:intron 40.0%
! CACCATCTATGATGTTGACT+TGG + Chr1:87464973-87464992 MsG0180005135.01.T01:CDS 40.0%
! CAGCACATTCAATTCGAGTT+CGG - Chr1:87462202-87462221 None:intergenic 40.0%
! CCATTTTCCAAACCCAAACT+GGG - Chr1:87463898-87463917 None:intergenic 40.0%
! GAAGTGTTTATGGCCATGTT+TGG + Chr1:87461449-87461468 MsG0180005135.01.T01:intron 40.0%
! GGAAATTAGGAGAAGGTACA+TGG + Chr1:87465045-87465064 MsG0180005135.01.T01:intron 40.0%
! GTGATGATGAGTCCTAGAAA+AGG + Chr1:87463175-87463194 MsG0180005135.01.T01:intron 40.0%
! GTGTTCGAGGTTTAAGTTTG+AGG + Chr1:87460946-87460965 MsG0180005135.01.T01:intron 40.0%
! TATTTTACGGCGTTCTGTCA+GGG + Chr1:87462964-87462983 MsG0180005135.01.T01:intron 40.0%
! TCGACACTTTGAAGGATGAA+GGG + Chr1:87461799-87461818 MsG0180005135.01.T01:CDS 40.0%
! TCTAGGACTCATCATCACAA+AGG - Chr1:87463173-87463192 None:intergenic 40.0%
! TGGTGGGGGTTTTTATATAG+GGG - Chr1:87463548-87463567 None:intergenic 40.0%
! TGTAGACATAGAAAGCACAG+TGG - Chr1:87465916-87465935 None:intergenic 40.0%
!! AGTGGTTTGTTAGCACTGTT+GGG - Chr1:87460487-87460506 None:intergenic 40.0%
!! ATCTTGAGGTGACTTGTTTG+AGG + Chr1:87460992-87461011 MsG0180005135.01.T01:intron 40.0%
!! ATTCGGCACTGAACAGATTT+TGG - Chr1:87460271-87460290 None:intergenic 40.0%
!! GATCAGAAACTTCTGGTTTC+TGG - Chr1:87464746-87464765 None:intergenic 40.0%
!! GGTAGGCATTAGATTTTTGG+GGG + Chr1:87465298-87465317 MsG0180005135.01.T01:intron 40.0%
!! GGTGACTTGTTTGAGGAATT+AGG + Chr1:87460999-87461018 MsG0180005135.01.T01:intron 40.0%
!! GTAGGCATTAGATTTTTGGG+GGG + Chr1:87465299-87465318 MsG0180005135.01.T01:intron 40.0%
!! GTTTGGACATTCTTTTGAGG+TGG + Chr1:87461308-87461327 MsG0180005135.01.T01:intron 40.0%
!! TAGGCATTAGATTTTTGGGG+GGG + Chr1:87465300-87465319 MsG0180005135.01.T01:intron 40.0%
!! TAGTGGTTTGTTAGCACTGT+TGG - Chr1:87460488-87460507 None:intergenic 40.0%
!! TCGACAACCGTTCTAAGTTT+TGG - Chr1:87458514-87458533 None:intergenic 40.0%
!!! CAGTGTACTTTTTTTGGTGG+GGG - Chr1:87463562-87463581 None:intergenic 40.0%
!!! CATTCTTTTGAGGTGGTTTG+TGG + Chr1:87461315-87461334 MsG0180005135.01.T01:intron 40.0%
!!! GCAGTGTACTTTTTTTGGTG+GGG - Chr1:87463563-87463582 None:intergenic 40.0%
!!! TGGTTTTTCTGGGATGTGTT+AGG + Chr1:87461666-87461685 MsG0180005135.01.T01:intron 40.0%
AAAAACCAGCTTGTGAGGTG+AGG - Chr1:87461654-87461673 None:intergenic 45.0%
AAACCTTCAGAGGATGCTCT+TGG - Chr1:87457955-87457974 None:intergenic 45.0%
AAGAAGAAGGAAGGAAAGCC+AGG + Chr1:87462929-87462948 MsG0180005135.01.T01:CDS 45.0%
AGAAGAAGGAAGGAAAGCCA+GGG + Chr1:87462930-87462949 MsG0180005135.01.T01:CDS 45.0%
AGCATTGTGACCCGCTAAAA+AGG - Chr1:87460081-87460100 None:intergenic 45.0%
AGTGAGCTCGTAGAATTCAC+TGG - Chr1:87460668-87460687 None:intergenic 45.0%
ATGACATTGCTATGCAGGTG+AGG + Chr1:87462743-87462762 MsG0180005135.01.T01:intron 45.0%
ATTGCCTTCTGGATCACTAG+TGG - Chr1:87464004-87464023 None:intergenic 45.0%
CAAACCTTCTCTACAAGGCA+AGG - Chr1:87461861-87461880 None:intergenic 45.0%
CAGTGCTTCATTCCAATCAG+TGG - Chr1:87463697-87463716 None:intergenic 45.0%
CATCATAGATGGTGCTCTGA+AGG - Chr1:87464967-87464986 None:intergenic 45.0%
CCAAGTCTTGCAAGTACAGA+TGG - Chr1:87465018-87465037 None:intergenic 45.0%
CCATCTGTACTTGCAAGACT+TGG + Chr1:87465015-87465034 MsG0180005135.01.T01:CDS 45.0%
CGCAACCCCTCCAATATATA+AGG - Chr1:87462168-87462187 None:intergenic 45.0%
CTATTCATAGCTGGGAGAGA+GGG + Chr1:87459252-87459271 MsG0180005135.01.T01:intron 45.0%
CTGCATAGCAATGTCATGGA+AGG - Chr1:87462740-87462759 None:intergenic 45.0%
CTGGTAGCAAGTGACTCATT+TGG - Chr1:87464727-87464746 None:intergenic 45.0%
CTTACAGGTGGACCATATCT+AGG - Chr1:87458304-87458323 None:intergenic 45.0%
CTTCCATGACATTGCTATGC+AGG + Chr1:87462738-87462757 MsG0180005135.01.T01:intron 45.0%
GAAATGGCTAGATCTCTTCC+TGG + Chr1:87463471-87463490 MsG0180005135.01.T01:intron 45.0%
GAGATGGGAAAGAAGAAGGA+AGG + Chr1:87462920-87462939 MsG0180005135.01.T01:CDS 45.0%
GAGCTATGCTTTACTGGAAC+TGG + Chr1:87460790-87460809 MsG0180005135.01.T01:intron 45.0%
GCAACAAGACCATCCATGTT+TGG - Chr1:87458151-87458170 None:intergenic 45.0%
GCAATTAATTACCCAGGTGC+TGG + Chr1:87461760-87461779 MsG0180005135.01.T01:intron 45.0%
GCAGAGCAAAAGTGGAGAAA+TGG + Chr1:87463455-87463474 MsG0180005135.01.T01:intron 45.0%
GCAGGATGATAGAGAGAGAT+TGG + Chr1:87460924-87460943 MsG0180005135.01.T01:intron 45.0%
GCATTAAATGCACTTGCCAC+TGG + Chr1:87462409-87462428 MsG0180005135.01.T01:CDS 45.0%
GGAGATCATGAGATGTTGGT+AGG + Chr1:87460532-87460551 MsG0180005135.01.T01:CDS 45.0%
GGGATACAAAAGAGAGATCG+AGG - Chr1:87458762-87458781 None:intergenic 45.0%
GTACTTGCAAGACTTGGGAA+TGG + Chr1:87465021-87465040 MsG0180005135.01.T01:CDS 45.0%
GTGAGCTCGTAGAATTCACT+GGG - Chr1:87460667-87460686 None:intergenic 45.0%
GTGCTTCATTCCAATCAGTG+GGG - Chr1:87463695-87463714 None:intergenic 45.0%
GTTGATGCTTTCCCTGAAAC+TGG + Chr1:87460242-87460261 MsG0180005135.01.T01:CDS 45.0%
TATCGCAATTAGTGCTCGGA+TGG + Chr1:87465517-87465536 MsG0180005135.01.T01:intron 45.0%
TATGGTCCACCTGTAAGTCA+TGG + Chr1:87458307-87458326 MsG0180005135.01.T01:CDS 45.0%
TCACCTGCATAGCAATGTCA+TGG - Chr1:87462744-87462763 None:intergenic 45.0%
TCCAAACCCAAACTGGGAAT+AGG - Chr1:87463892-87463911 None:intergenic 45.0%
TCTTCCTTGCCTTGTAGAGA+AGG + Chr1:87461854-87461873 MsG0180005135.01.T01:CDS 45.0%
TGAACTGCTCGACACTTTGA+AGG + Chr1:87461791-87461810 MsG0180005135.01.T01:CDS 45.0%
TGAAGGTGGTGTAACTTGAC+AGG + Chr1:87462892-87462911 MsG0180005135.01.T01:intron 45.0%
TGATGACAAACCCTTGCGAA+TGG + Chr1:87465153-87465172 MsG0180005135.01.T01:CDS 45.0%
TGATGAGTCCTAGAAAAGGC+CGG + Chr1:87463179-87463198 MsG0180005135.01.T01:intron 45.0%
TGCAGTTCGTAGAGATTCCA+AGG - Chr1:87457816-87457835 None:intergenic 45.0%
TGGCTTGAACATGTGTTGTG+GGG + Chr1:87461623-87461642 MsG0180005135.01.T01:intron 45.0%
TTGCAAGTTTAACGGCCGAA+CGG + Chr1:87462365-87462384 MsG0180005135.01.T01:CDS 45.0%
! AATGTTGACTGCATCTGGAC+CGG + Chr1:87465389-87465408 MsG0180005135.01.T01:intron 45.0%
! ATCTTTTATCGCGTGCAGAC+TGG + Chr1:87460621-87460640 MsG0180005135.01.T01:intron 45.0%
! ATGATAATGTTCCACGCGCA+TGG + Chr1:87464404-87464423 MsG0180005135.01.T01:intron 45.0%
! CACTGATTGGAATGAAGCAC+TGG + Chr1:87463695-87463714 MsG0180005135.01.T01:intron 45.0%
! CCCAGTTTGGGTTTGGAAAA+TGG + Chr1:87463895-87463914 MsG0180005135.01.T01:intron 45.0%
! CTATTTTACGGCGTTCTGTC+AGG + Chr1:87462963-87462982 MsG0180005135.01.T01:intron 45.0%
! CTCGACACTTTGAAGGATGA+AGG + Chr1:87461798-87461817 MsG0180005135.01.T01:CDS 45.0%
! CTTATCTGGTTTAAGCGGAG+AGG + Chr1:87460205-87460224 MsG0180005135.01.T01:CDS 45.0%
! GCAAGAATGTTGACTGCATC+TGG + Chr1:87465384-87465403 MsG0180005135.01.T01:intron 45.0%
! GGTTGAGGTTTCGTATCGAT+AGG - Chr1:87465247-87465266 None:intergenic 45.0%
! TAGAGAGAGATTGGTGTTCG+AGG + Chr1:87460933-87460952 MsG0180005135.01.T01:intron 45.0%
! TCCTATTCCCAGTTTGGGTT+TGG + Chr1:87463888-87463907 MsG0180005135.01.T01:intron 45.0%
! TGGGTATCGCAATTAGTGCT+CGG + Chr1:87465513-87465532 MsG0180005135.01.T01:intron 45.0%
!! GGGAAGCTAGGGCTATTTTA+CGG + Chr1:87462951-87462970 MsG0180005135.01.T01:CDS 45.0%
!! TGGAACATGAAGGAGGCATT+CGG - Chr1:87457858-87457877 None:intergenic 45.0%
!! TGTTCCAAGGCCTTTTTAGC+GGG + Chr1:87460068-87460087 MsG0180005135.01.T01:intron 45.0%
!! TTCAAAGTGTCGAGCAGTTC+AGG - Chr1:87461792-87461811 None:intergenic 45.0%
!! TTGCAGGCCTTGTTGTTGTT+GGG + Chr1:87458574-87458593 MsG0180005135.01.T01:CDS 45.0%
!! TTTGCAGGCCTTGTTGTTGT+TGG + Chr1:87458573-87458592 MsG0180005135.01.T01:CDS 45.0%
!!! ACCTCACAAGCTGGTTTTTC+TGG + Chr1:87461655-87461674 MsG0180005135.01.T01:intron 45.0%
!!! CCTCACAAGCTGGTTTTTCT+GGG + Chr1:87461656-87461675 MsG0180005135.01.T01:intron 45.0%
AAAATAGCCCTAGCTTCCCC+TGG - Chr1:87462950-87462969 None:intergenic 50.0%
ACATGCTTACGCGTTCGCTT+TGG + Chr1:87459690-87459709 MsG0180005135.01.T01:CDS 50.0%
ATGCTCTTGGAGTCCAGTTG+AGG - Chr1:87457942-87457961 None:intergenic 50.0%
CAAGGGTTTGTCATCAGCAC+CGG - Chr1:87465149-87465168 None:intergenic 50.0%
CAATTGATTGCCTCGTCCTG+TGG + Chr1:87463656-87463675 MsG0180005135.01.T01:intron 50.0%
CACGGGAGATCATGAGATGT+TGG + Chr1:87460528-87460547 MsG0180005135.01.T01:CDS 50.0%
CATGCATGCTTCCTTAGGCA+TGG + Chr1:87465540-87465559 MsG0180005135.01.T01:intron 50.0%
CATGCTTACGCGTTCGCTTT+GGG + Chr1:87459691-87459710 MsG0180005135.01.T01:CDS 50.0%
CCCAGAAAAACCAGCTTGTG+AGG - Chr1:87461659-87461678 None:intergenic 50.0%
CCTAATATCCCCATCCCGTT+CGG - Chr1:87462383-87462402 None:intergenic 50.0%
CCTATTCATAGCTGGGAGAG+AGG + Chr1:87459251-87459270 MsG0180005135.01.T01:intron 50.0%
CCTCTCTCCCAGCTATGAAT+AGG - Chr1:87459254-87459273 None:intergenic 50.0%
CCTGGTCCGTTATTGAGGTA+TGG + Chr1:87463489-87463508 MsG0180005135.01.T01:intron 50.0%
CCTTCTTCTTTCCCATCTCC+CGG - Chr1:87462919-87462938 None:intergenic 50.0%
CTCTTCCTGGTCCGTTATTG+AGG + Chr1:87463484-87463503 MsG0180005135.01.T01:intron 50.0%
CTGATGTCGCAGAGCAAAAG+TGG + Chr1:87463447-87463466 MsG0180005135.01.T01:intron 50.0%
CTTCGCGGTGCAGCAATAAA+GGG + Chr1:87465205-87465224 MsG0180005135.01.T01:intron 50.0%
CTTGCAAGACTTGGGAATGG+AGG + Chr1:87465024-87465043 MsG0180005135.01.T01:CDS 50.0%
GAAGAAGGAAGGAAAGCCAG+GGG + Chr1:87462931-87462950 MsG0180005135.01.T01:CDS 50.0%
GAATCTCTACGAACTGCAGC+TGG + Chr1:87457818-87457837 MsG0180005135.01.T01:CDS 50.0%
GAATTCTACGAGCTCACTCG+CGG + Chr1:87460670-87460689 MsG0180005135.01.T01:intron 50.0%
GATGGCATGCATGCTTCCTT+AGG + Chr1:87465535-87465554 MsG0180005135.01.T01:intron 50.0%
GCTATGCAGGTGAGGACATA+TGG + Chr1:87462751-87462770 MsG0180005135.01.T01:intron 50.0%
GGCGTTCTGTCAGGGAAAAT+GGG + Chr1:87462972-87462991 MsG0180005135.01.T01:intron 50.0%
GGCTTGAACATGTGTTGTGG+GGG + Chr1:87461624-87461643 MsG0180005135.01.T01:intron 50.0%
GGGAATAGATGAGGAAAGGC+TGG + Chr1:87463307-87463326 MsG0180005135.01.T01:intron 50.0%
GTGGTGTAACTTGACAGGTC+CGG + Chr1:87462897-87462916 MsG0180005135.01.T01:intron 50.0%
GTTAGAGGGTGAGTTCCTGA+AGG + Chr1:87459159-87459178 MsG0180005135.01.T01:CDS 50.0%
TACGTCCGCTAGATCCATCA+AGG + Chr1:87464686-87464705 MsG0180005135.01.T01:intron 50.0%
TCAGCTTCAAAATGCCAGCG+AGG + Chr1:87466284-87466303 MsG0180005135.01.T01:CDS 50.0%
TCAGGAAGATTCCAGCACCT+GGG - Chr1:87461774-87461793 None:intergenic 50.0%
TCATCCATGGCATTGCCTTC+TGG - Chr1:87464015-87464034 None:intergenic 50.0%
TCTGTGATGCAGTCTGTGGA+AGG + Chr1:87463946-87463965 MsG0180005135.01.T01:intron 50.0%
TCTTGATCATCATGGGGCAG+AGG + Chr1:87462237-87462256 MsG0180005135.01.T01:intron 50.0%
TGATCCAGAAGGCAATGCCA+TGG + Chr1:87464008-87464027 MsG0180005135.01.T01:CDS 50.0%
TGCAAGTTTAACGGCCGAAC+GGG + Chr1:87462366-87462385 MsG0180005135.01.T01:CDS 50.0%
TGCTGCATTACCGATGAAGG+TGG + Chr1:87462878-87462897 MsG0180005135.01.T01:intron 50.0%
TGGTGTAACTTGACAGGTCC+GGG + Chr1:87462898-87462917 MsG0180005135.01.T01:intron 50.0%
TGTGCTCAACACTCTCATGC+AGG + Chr1:87464217-87464236 MsG0180005135.01.T01:CDS 50.0%
TTCAGGAAGATTCCAGCACC+TGG - Chr1:87461775-87461794 None:intergenic 50.0%
TTCTGCTGATGCCCAGTTGA+AGG + Chr1:87465463-87465482 MsG0180005135.01.T01:intron 50.0%
TTCTTTCGGTTCTCCTGAGC+AGG + Chr1:87463725-87463744 MsG0180005135.01.T01:intron 50.0%
! ATGTTGACTGCATCTGGACC+GGG + Chr1:87465390-87465409 MsG0180005135.01.T01:intron 50.0%
! TGTTTGCCATGAGTTGGCTC+AGG + Chr1:87463978-87463997 MsG0180005135.01.T01:CDS 50.0%
!! ACTCCAAGAGCATCCTCTGA+AGG + Chr1:87457949-87457968 MsG0180005135.01.T01:CDS 50.0%
!! CACGAGCTTGTTAAGCTTCG+CGG + Chr1:87465190-87465209 MsG0180005135.01.T01:intron 50.0%
!! CCATACCTCAATAACGGACC+AGG - Chr1:87463492-87463511 None:intergenic 50.0%
!! GACTCATTTGGTGCAGGTGA+AGG - Chr1:87464715-87464734 None:intergenic 50.0%
!! GCAAGTGACTCATTTGGTGC+AGG - Chr1:87464721-87464740 None:intergenic 50.0%
!! GGAACATGAAGGAGGCATTC+GGG - Chr1:87457857-87457876 None:intergenic 50.0%
!! GTAAGCAGGATGATGGGTTG+AGG - Chr1:87465262-87465281 None:intergenic 50.0%
AACTTGACAGGTCCGGGAGA+TGG + Chr1:87462904-87462923 MsG0180005135.01.T01:intron 55.0%
AAGGAAAGCCAGGGGAAGCT+AGG + Chr1:87462939-87462958 MsG0180005135.01.T01:CDS 55.0%
ACAAGAGCCGCAAACACAGC+TGG - Chr1:87460463-87460482 None:intergenic 55.0%
ACTTGACAGGTCCGGGAGAT+GGG + Chr1:87462905-87462924 MsG0180005135.01.T01:intron 55.0%
AGGAAAGCCAGGGGAAGCTA+GGG + Chr1:87462940-87462959 MsG0180005135.01.T01:CDS 55.0%
AGTTTAACGGCCGAACGGGA+TGG + Chr1:87462370-87462389 MsG0180005135.01.T01:CDS 55.0%
ATTCCAATCAGTGGGGCCAC+TGG - Chr1:87463688-87463707 None:intergenic 55.0%
CAGGCCACTAGTGATCCAGA+AGG + Chr1:87463997-87464016 MsG0180005135.01.T01:CDS 55.0%
CATTCCAATGTTTGGCCCCC+CGG - Chr1:87465411-87465430 None:intergenic 55.0%
CCGAACGGGATGGGGATATT+AGG + Chr1:87462380-87462399 MsG0180005135.01.T01:CDS 55.0%
CCGGGAGATGGGAAAGAAGA+AGG + Chr1:87462916-87462935 MsG0180005135.01.T01:CDS 55.0%
CGAACGCGTAAGCATGTCCT+TGG - Chr1:87459687-87459706 None:intergenic 55.0%
CGGCGTTCTGTCAGGGAAAA+TGG + Chr1:87462971-87462990 MsG0180005135.01.T01:intron 55.0%
CTGAGCTTCTTCTGGGCTCT+TGG + Chr1:87464381-87464400 MsG0180005135.01.T01:intron 55.0%
GAGTCCTAGAAAAGGCCGGA+CGG + Chr1:87463183-87463202 MsG0180005135.01.T01:intron 55.0%
GCAATCCTCACCTCACAAGC+TGG + Chr1:87461646-87461665 MsG0180005135.01.T01:intron 55.0%
GCTATGTCATCCACCTGCTC+AGG - Chr1:87463741-87463760 None:intergenic 55.0%
GCTTCGCGGTGCAGCAATAA+AGG + Chr1:87465204-87465223 MsG0180005135.01.T01:intron 55.0%
GGCACTTCCATCCATTGCCA+AGG + Chr1:87461274-87461293 MsG0180005135.01.T01:intron 55.0%
GTAAGTGCGAAATGCCTCGC+TGG - Chr1:87466301-87466320 None:intergenic 55.0%
GTCCGCTAGATCCATCAAGG+TGG + Chr1:87464689-87464708 MsG0180005135.01.T01:intron 55.0%
GTGACCCGCTAAAAAGGCCT+TGG - Chr1:87460075-87460094 None:intergenic 55.0%
GTTTAACGGCCGAACGGGAT+GGG + Chr1:87462371-87462390 MsG0180005135.01.T01:CDS 55.0%
GTTTGAGTGGGGCTTCATCG+CGG + Chr1:87464183-87464202 MsG0180005135.01.T01:intron 55.0%
TAGTGGCCTGAGCCAACTCA+TGG - Chr1:87463987-87464006 None:intergenic 55.0%
TGTTCCACGCGCATGGATGA+TGG + Chr1:87464411-87464430 MsG0180005135.01.T01:intron 55.0%
TTGCTCTGCGACATCAGACC+TGG - Chr1:87463444-87463463 None:intergenic 55.0%
TTTAACGGCCGAACGGGATG+GGG + Chr1:87462372-87462391 MsG0180005135.01.T01:CDS 55.0%
TTTCGGTTCTCCTGAGCAGG+TGG + Chr1:87463728-87463747 MsG0180005135.01.T01:intron 55.0%
! CATCAGAGATGGTCTTGCCC+AGG + Chr1:87466320-87466339 MsG0180005135.01.T01:CDS 55.0%
! CATTCCGTCCGGCCTTTTCT+AGG - Chr1:87463190-87463209 None:intergenic 55.0%
! CGAGGAAAAGGCACAGCTGA+AGG - Chr1:87458744-87458763 None:intergenic 55.0%
! GGCCACCTTGATGGATCTAG+CGG - Chr1:87464694-87464713 None:intergenic 55.0%
! TGTTGACTGCATCTGGACCG+GGG + Chr1:87465391-87465410 MsG0180005135.01.T01:intron 55.0%
GCAGGTGAAGGCCACCTTGA+TGG - Chr1:87464703-87464722 None:intergenic 60.0%
GCTTCCATCATCCATGCGCG+TGG - Chr1:87464418-87464437 None:intergenic 60.0%
GTTGACTGCATCTGGACCGG+GGG + Chr1:87465392-87465411 MsG0180005135.01.T01:intron 60.0%
TTGACTGCATCTGGACCGGG+GGG + Chr1:87465393-87465412 MsG0180005135.01.T01:intron 60.0%
TTGCCAGTGGCCCCACTGAT+TGG + Chr1:87463682-87463701 MsG0180005135.01.T01:intron 60.0%
CGTCCTGTGGCTGTTGCCAG+TGG + Chr1:87463669-87463688 MsG0180005135.01.T01:intron 65.0%
CTGGCAACAGCCACAGGACG+AGG - Chr1:87463669-87463688 None:intergenic 65.0%
TGGACCGGGGGGCCAAACAT+TGG + Chr1:87465404-87465423 MsG0180005135.01.T01:intron 65.0%
GGGCCACTGGCAACAGCCAC+AGG - Chr1:87463675-87463694 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 87457734 87466351 87457734 ID=MsG0180005135.01;Name=MsG0180005135.01
Chr1 mRNA 87457734 87466351 87457734 ID=MsG0180005135.01.T01;Parent=MsG0180005135.01;Name=MsG0180005135.01.T01;_AED=0.50;_eAED=0.56;_QI=65|0.46|0.31|1|0.46|0.37|16|0|491
Chr1 exon 87457734 87457970 87457734 ID=MsG0180005135.01.T01:exon:47619;Parent=MsG0180005135.01.T01
Chr1 exon 87458245 87458328 87458245 ID=MsG0180005135.01.T01:exon:47620;Parent=MsG0180005135.01.T01
Chr1 exon 87458560 87458621 87458560 ID=MsG0180005135.01.T01:exon:47621;Parent=MsG0180005135.01.T01
Chr1 exon 87459139 87459180 87459139 ID=MsG0180005135.01.T01:exon:47622;Parent=MsG0180005135.01.T01
Chr1 exon 87459671 87459786 87459671 ID=MsG0180005135.01.T01:exon:47623;Parent=MsG0180005135.01.T01
Chr1 exon 87460154 87460263 87460154 ID=MsG0180005135.01.T01:exon:47624;Parent=MsG0180005135.01.T01
Chr1 exon 87460452 87460569 87460452 ID=MsG0180005135.01.T01:exon:47625;Parent=MsG0180005135.01.T01
Chr1 exon 87461776 87461875 87461776 ID=MsG0180005135.01.T01:exon:47626;Parent=MsG0180005135.01.T01
Chr1 exon 87462340 87462445 87462340 ID=MsG0180005135.01.T01:exon:47627;Parent=MsG0180005135.01.T01
Chr1 exon 87462760 87462836 87462760 ID=MsG0180005135.01.T01:exon:47628;Parent=MsG0180005135.01.T01
Chr1 exon 87462914 87462979 87462914 ID=MsG0180005135.01.T01:exon:47629;Parent=MsG0180005135.01.T01
Chr1 exon 87463958 87464037 87463958 ID=MsG0180005135.01.T01:exon:47630;Parent=MsG0180005135.01.T01
Chr1 exon 87464184 87464238 87464184 ID=MsG0180005135.01.T01:exon:47631;Parent=MsG0180005135.01.T01
Chr1 exon 87464903 87465059 87464903 ID=MsG0180005135.01.T01:exon:47632;Parent=MsG0180005135.01.T01
Chr1 exon 87465144 87465174 87465144 ID=MsG0180005135.01.T01:exon:47633;Parent=MsG0180005135.01.T01
Chr1 exon 87466252 87466351 87466252 ID=MsG0180005135.01.T01:exon:47634;Parent=MsG0180005135.01.T01
Chr1 five_prime_UTR 87457734 87457798 87457734 ID=MsG0180005135.01.T01:five_prime_utr;Parent=MsG0180005135.01.T01
Chr1 CDS 87457799 87457970 87457799 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87458245 87458328 87458245 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87458560 87458621 87458560 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87459139 87459180 87459139 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87459671 87459786 87459671 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87460154 87460263 87460154 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87460452 87460569 87460452 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87461776 87461875 87461776 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87462340 87462445 87462340 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87462760 87462836 87462760 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87462914 87462979 87462914 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87463958 87464037 87463958 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87464184 87464238 87464184 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87464903 87465059 87464903 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87465144 87465174 87465144 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Chr1 CDS 87466252 87466351 87466252 ID=MsG0180005135.01.T01:cds;Parent=MsG0180005135.01.T01
Gene Sequence

>MsG0180005135.01.T01

ATGATGTCATTTGGCCTTGGAATCTCTACGAACTGCAGCTGGTTGAGATGTCACGCCCGAATGCCTCCTTCATGTTCCATGTTTTCCCATGTTTCAATGTCTTCTCCTTCTTCTTGTTCCATTTTCAACTCTAATAATAACCTCAACTGGACTCCAAGAGCATCCTCTGAAGGACTTCCTAATGAGTTAGTTGAAGATTCAAAATTTGTTCCTATAAATGTTGAGGATCCTAGATATGGTCCACCTGTAAGTCATGGGGTTTCTTTTATTTTGCAGGCCTTGTTGTTGTTGGGATTTGAAGCAGATGAACATTTTAAGATTCAACAGTTTTTGAAAGAGTTAGAGGGTGAGTTCCTGAAGGTCATCTATTGTACCAAGGACATGCTTACGCGTTCGCTTTGGGATGTAATGCATACAACACAAGAGAGTTTAGAAGAGGTCAAGGTAGAACTCCCTCTCCATCTGTTCATGAATTTCATTTTGTGCCTTGCATTGCAGATAGACAAGTCACTTCCACGAATATGTTTCTTATCTGGTTTAAGCGGAGAGGAGATGATGATGTTCGTTGATGCTTTCCCTGAAACTGGACTAAAACCAGCTGTGTTTGCGGCTCTTGTTCCCAACAGTGCTAACAAACCACTATATGAGTTGATAGAAGAAATCACGGGAGATCATGAGATGTTGGTAGGTCTTTATTTTCTAGTGTGCTGGAATCTTCCTGAACTGCTCGACACTTTGAAGGATGAAGGGTATTCTTTGACAGAGTCTGAAGTTGCAATCTTTCTTCCTTGCCTTGTAGAGAAGTGGCAACTAAAGTCATTGCAAATTGTTGCAAGTTTAACGGCCGAACGGGATGGGGATATTAGGAAAGCTGCATTAAATGCACTTGCCACTGGTTATAAAATTCTCGGTGAGGACATATGGAGATTTGTCGGGAAACTAACAGATGCTCAAAAAAGCATGTTAGATGATAGATTTAAGTGGAAGGTCCGGGAGATGGGAAAGAAGAAGGAAGGAAAGCCAGGGGAAGCTAGGGCTATTTTACGGCGTTCTTCTGTGGAAGGAATGAAAGTTGTTTGCCATGAGTTGGCTCAGGCCACTAGTGATCCAGAAGGCAATGCCATGGATGAACTTTTGAGTGGGGCTTCATCGCGGTCCTGTAAATATGTGCTCAACACTCTCATGCAGATAGACTTGATCTTTAAAAACTTGGTTGCATTATTTCACATGCATTTGATGCGATTCAGGTCCTTCAGAGCACCATCTATGATGTTGACTTGGATCGCATACTTCAAAGCATCCATCTGTACTTGCAAGACTTGGGAATGGAGGAAATTAGGAGAAGGGCCGGTGCTGATGACAAACCCTTGCGAATGGTTCTTGGTTTACCATAGGTTGACATATTTGATCAGCTTCAAAATGCCAGCGAGGCATTTCGCACTTACATCAGAGATGGTCTTGCCCAGGTTGATATGA

Protein sequence

>MsG0180005135.01.T01

MMSFGLGISTNCSWLRCHARMPPSCSMFSHVSMSSPSSCSIFNSNNNLNWTPRASSEGLPNELVEDSKFVPINVEDPRYGPPVSHGVSFILQALLLLGFEADEHFKIQQFLKELEGEFLKVIYCTKDMLTRSLWDVMHTTQESLEEVKVELPLHLFMNFILCLALQIDKSLPRICFLSGLSGEEMMMFVDAFPETGLKPAVFAALVPNSANKPLYELIEEITGDHEMLVGLYFLVCWNLPELLDTLKDEGYSLTESEVAIFLPCLVEKWQLKSLQIVASLTAERDGDIRKAALNALATGYKILGEDIWRFVGKLTDAQKSMLDDRFKWKVREMGKKKEGKPGEARAILRRSSVEGMKVVCHELAQATSDPEGNAMDELLSGASSRSCKYVLNTLMQIDLIFKNLVALFHMHLMRFRSFRAPSMMLTWIAYFKASICTCKTWEWRKLGEGPVLMTNPCEWFLVYHRLTYLISFKMPARHFALTSEMVLPRLI*