AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020758.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020758.01.T01 MTR_4g057970 78.947 570 38 5 3 491 19 587 0.0 811
MsG0480020758.01.T01 MTR_4g084130 51.115 538 178 9 26 479 34 570 8.12e-164 476
MsG0480020758.01.T01 MTR_4g084130 48.690 458 150 9 106 479 2 458 1.81e-124 371
MsG0480020758.01.T01 MTR_1g017380 43.462 543 220 11 29 486 43 583 2.98e-121 367
MsG0480020758.01.T01 MTR_1g017390 43.278 543 221 11 29 486 43 583 6.61e-121 366
MsG0480020758.01.T01 MTR_1g090140 37.786 569 269 11 1 486 1 567 1.20e-106 329
MsG0480020758.01.T01 MTR_1g090130 38.104 559 261 11 1 476 1 557 4.10e-103 320
MsG0480020758.01.T01 MTR_8g017080 35.460 533 252 11 34 478 36 564 5.53e-86 276
MsG0480020758.01.T01 MTR_0991s0010 54.545 143 62 2 29 168 43 185 1.24e-43 152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020758.01.T01 AT2G28000 67.621 559 94 9 17 491 31 586 0.0 660
MsG0480020758.01.T01 AT5G18820 49.372 557 190 10 17 487 18 568 7.26e-160 466
MsG0480020758.01.T01 AT5G56500 43.978 548 220 11 22 484 41 586 1.13e-122 371
MsG0480020758.01.T01 AT5G56500 43.978 548 220 11 22 484 41 586 1.13e-122 371
MsG0480020758.01.T01 AT1G55490 42.831 551 228 11 21 486 44 592 1.04e-121 369
MsG0480020758.01.T01 AT1G55490 42.831 551 228 11 21 486 44 592 1.04e-121 369
MsG0480020758.01.T01 AT1G55490 42.831 551 228 11 21 486 44 592 1.04e-121 369
MsG0480020758.01.T01 AT1G55490 42.831 551 228 11 21 486 44 592 1.04e-121 369
MsG0480020758.01.T01 AT1G55490 42.831 551 228 11 21 486 44 592 1.04e-121 369
MsG0480020758.01.T01 AT3G13470 42.162 555 234 10 17 486 36 588 2.67e-121 368
MsG0480020758.01.T01 AT5G18820 46.895 467 157 9 106 487 2 462 4.98e-120 360
MsG0480020758.01.T01 AT5G18820 50.000 396 145 5 17 360 18 412 1.71e-116 350
MsG0480020758.01.T01 AT1G26230 37.477 539 246 12 29 478 36 572 7.78e-102 318
MsG0480020758.01.T01 AT3G23990 37.722 562 260 12 1 477 1 557 1.51e-101 316
MsG0480020758.01.T01 AT2G33210 38.910 532 243 12 32 482 33 563 1.54e-99 311
MsG0480020758.01.T01 AT1G26230 37.500 520 236 11 46 478 3 520 1.67e-97 305
MsG0480020758.01.T01 AT2G33210 38.910 532 238 13 32 482 33 558 7.98e-97 304
MsG0480020758.01.T01 AT1G26230 38.655 476 229 9 29 443 36 509 4.25e-96 301
MsG0480020758.01.T01 AT1G26230 37.427 513 232 11 53 478 2 512 2.33e-95 299
MsG0480020758.01.T01 AT3G13860 36.932 528 245 10 32 475 32 555 2.00e-89 285
MsG0480020758.01.T01 AT1G26230 38.971 408 193 7 29 382 36 441 1.34e-85 271

Find 136 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAGCAGCCGCAGCTGCCC+TGG 0.199355 4:+47831768 None:intergenic
GGCAGCAAAAGTTGCATTCT+TGG 0.207810 4:+47832644 None:intergenic
GACTACAACGGCTTCGATTT+TGG 0.214195 4:-47834073 MsG0480020758.01.T01:CDS
ATGCTGGTGCAGCTCTAATT+AGG 0.223973 4:-47834276 MsG0480020758.01.T01:CDS
GAGTTCCAGGCCAGTGATTT+GGG 0.275875 4:-47832945 MsG0480020758.01.T01:CDS
TGAGTTCCAGGCCAGTGATT+TGG 0.282182 4:-47832946 MsG0480020758.01.T01:CDS
CAGCTGTTGCTTCTATTTGC+TGG 0.288158 4:-47833815 MsG0480020758.01.T01:CDS
CAGAATGCTGCTTCAGTGGC+TGG 0.296833 4:-47831835 MsG0480020758.01.T01:CDS
ACTGCTAGGTGCTGAGTTCC+AGG 0.304928 4:-47832958 MsG0480020758.01.T01:intron
TCTTTATTGCGGAAATCTTT+TGG 0.308233 4:+47833470 None:intergenic
ATATCATCTCCACCTTTAAC+AGG 0.315746 4:+47833928 None:intergenic
TTCAATTGAACAACTTGGTT+TGG 0.329096 4:-47832904 MsG0480020758.01.T01:CDS
CTTTGATGGCAGCCACATTA+AGG 0.329763 4:+47833333 None:intergenic
GCAGCAGCCGCAGCTGCCCT+GGG 0.332027 4:+47831769 None:intergenic
AAAGGTGGAGATGATATAAA+AGG 0.339200 4:-47833922 MsG0480020758.01.T01:CDS
AGTTTACGACTCGGAGAAAC+TGG 0.348292 4:-47832766 MsG0480020758.01.T01:CDS
GCCATCAAAGCTCCAGGATT+TGG 0.350317 4:-47833320 MsG0480020758.01.T01:CDS
TGATAAAACAGTAGCGGCTT+TGG 0.352770 4:-47833977 MsG0480020758.01.T01:CDS
AAGTTGGCTAGGCCTGTTAA+AGG 0.361241 4:-47833940 MsG0480020758.01.T01:CDS
TGAAGGGAGGAATGTTGTTT+TGG 0.363805 4:-47834377 MsG0480020758.01.T01:intron
ACCAAATCCTGGAGCTTTGA+TGG 0.365679 4:+47833319 None:intergenic
CAGATTGTAAATTGTAATCA+TGG 0.367285 4:+47832430 None:intergenic
ATTGAGGAAGGTATTGTTCC+TGG 0.376386 4:-47832621 MsG0480020758.01.T01:CDS
CAAAGGATGAGTTGCAATCC+AGG 0.386193 4:-47832827 MsG0480020758.01.T01:CDS
GAGAGGATTGCTAAATTATC+TGG 0.395315 4:-47832741 MsG0480020758.01.T01:CDS
AGATATCACTGGTGAGGCTT+TGG 0.395603 4:-47833387 MsG0480020758.01.T01:CDS
GCCGCAGCTGCCCTGGGCTT+AGG 0.396421 4:+47831775 None:intergenic
TTTCTTCTCTCACCAAATCC+TGG 0.401579 4:+47833308 None:intergenic
TGATGCAGCATCAGCAATAA+TGG 0.409954 4:+47832848 None:intergenic
GCTGGAAATGATGAGTTGAT+TGG 0.411796 4:-47833797 MsG0480020758.01.T01:CDS
GCTCAAAATGCTGGAATAGA+AGG 0.412779 4:-47831983 MsG0480020758.01.T01:CDS
CTTAAACGGTAAGGCCTTGT+GGG 0.430025 4:+47831746 None:intergenic
TCAATATTGCAATGTCTTGA+AGG 0.436075 4:+47833279 None:intergenic
TGCTGGTGCAGCTCTAATTA+GGG 0.437513 4:-47834275 MsG0480020758.01.T01:CDS
GGTGGAAGAGCTTGAGAAGT+TGG 0.438321 4:-47833956 MsG0480020758.01.T01:CDS
TTTCTTCAGTTGTGCAACCC+TGG 0.441852 4:+47832809 None:intergenic
AACAAGAAGGCCCAAATCAC+TGG 0.445601 4:+47832935 None:intergenic
GCTGCGGCTGCTGCCCCACA+AGG 0.449078 4:-47831760 MsG0480020758.01.T01:CDS
TACCTCGGGGTCCGAGAGTA+AGG 0.449271 4:+47835048 None:intergenic
GCATAGCACGGCGTGAATCT+TGG 0.451358 4:+47835105 None:intergenic
GGACTTCTCAGTGTGACATC+AGG 0.457635 4:-47834030 MsG0480020758.01.T01:CDS
GAAAATTAGAAGTGGTGAAT+GGG 0.459259 4:-47831945 MsG0480020758.01.T01:CDS
GGATGAGTTTGGCAGTCCTA+AGG 0.461802 4:-47834356 MsG0480020758.01.T01:CDS
TAATTAATCTAAAACTTAAA+CGG 0.464303 4:+47831732 None:intergenic
AGATTCACGCCGTGCTATGC+AGG 0.464712 4:-47835102 MsG0480020758.01.T01:CDS
GCCTAAGCCCAGGGCAGCTG+CGG 0.465058 4:-47831776 MsG0480020758.01.T01:CDS
ACACCATCGTTTACAACCTT+AGG 0.465120 4:+47834340 None:intergenic
GCTCGGGAAATCATTAAGCT+TGG 0.465886 4:-47834051 MsG0480020758.01.T01:CDS
TGCTGCTTCAGTGGCTGGGA+TGG 0.468314 4:-47831830 MsG0480020758.01.T01:CDS
TAAAGATATAATTCCTCTGT+TGG 0.469823 4:-47833453 MsG0480020758.01.T01:CDS
AGAAAATTAGAAGTGGTGAA+TGG 0.475205 4:-47831946 MsG0480020758.01.T01:CDS
CAAGACATTGCAATATTGAC+AGG 0.482708 4:-47833275 MsG0480020758.01.T01:intron
AAGTTTACGATCCTCAAGTT+CGG 0.483262 4:+47832680 None:intergenic
AATAATGGTGGTAGAATCCT+TGG 0.484524 4:+47832863 None:intergenic
AGGCACAAACGAGTCTTAGC+AGG 0.488076 4:-47835214 MsG0480020758.01.T01:CDS
TCACGCCGTGCTATGCAGGC+TGG 0.498346 4:-47835098 MsG0480020758.01.T01:CDS
TAAAACAGTAGCGGCTTTGG+TGG 0.499019 4:-47833974 MsG0480020758.01.T01:CDS
GATGCTGTTGGCCTTACTCT+CGG 0.499566 4:-47835059 MsG0480020758.01.T01:CDS
CACTTGCTTTAACAGTAAAA+CGG 0.503145 4:+47835147 None:intergenic
GAAGGCCCAAATCACTGGCC+TGG 0.503715 4:+47832940 None:intergenic
AATAGAAGGTGAAGTAGTTG+TGG 0.504535 4:-47831969 MsG0480020758.01.T01:CDS
TGTAATTAACCCTCCCATGT+TGG 0.504603 4:+47835183 None:intergenic
TTGAAGTGCTTTCAACAAGA+AGG 0.508700 4:+47832922 None:intergenic
ACTAATGACTCAGCTGGAGA+TGG 0.509296 4:-47834096 MsG0480020758.01.T01:CDS
AGCACTTCAATTGAACAACT+TGG 0.512887 4:-47832909 MsG0480020758.01.T01:CDS
TCATTGATTGCTCAAAATGC+TGG 0.518366 4:-47831992 MsG0480020758.01.T01:CDS
TGGAGATGATATAAAAGGTA+TGG 0.518984 4:-47833917 MsG0480020758.01.T01:intron
AGAATGCTGCTTCAGTGGCT+GGG 0.520388 4:-47831834 MsG0480020758.01.T01:CDS
CTTCGGCAATGATAAGCAAA+GGG 0.527412 4:+47833408 None:intergenic
TATTGAGTTACCTGATGCTA+TGG 0.527504 4:-47834302 MsG0480020758.01.T01:CDS
TCTGCAGAATGCTGCTTCAG+TGG 0.527899 4:-47831839 MsG0480020758.01.T01:CDS
AGCCTCACCAGTGATATCTT+CGG 0.529074 4:+47833391 None:intergenic
AATCTAAAACTTAAACGGTA+AGG 0.533828 4:+47831737 None:intergenic
AATCCTGTGTCAATCAAGAA+AGG 0.534087 4:-47834003 MsG0480020758.01.T01:CDS
AGTAAAACTAATGACTCAGC+TGG 0.535745 4:-47834102 MsG0480020758.01.T01:CDS
GGATCGTAAACTTAGAATTG+AGG 0.536649 4:-47832670 MsG0480020758.01.T01:CDS
GTGGCTGCCATCAAAGCTCC+AGG 0.538427 4:-47833326 MsG0480020758.01.T01:CDS
AGCAGGAAGGCGAACCAACA+TGG 0.541019 4:-47835197 MsG0480020758.01.T01:CDS
TGGTGGAGTGGCAGTCATCA+AGG 0.542101 4:-47832721 MsG0480020758.01.T01:CDS
ATTCCTTTCTTGATTGACAC+AGG 0.542961 4:+47834000 None:intergenic
ACAATGATTGCTGAAGCAAT+TGG 0.546352 4:-47833773 MsG0480020758.01.T01:CDS
ACTTAAACGGTAAGGCCTTG+TGG 0.553935 4:+47831745 None:intergenic
GAAGGTATTGTTCCTGGCGG+AGG 0.554238 4:-47832615 MsG0480020758.01.T01:intron
TTGTTGAAAAGCCTAAGCCC+AGG 0.555169 4:-47831786 MsG0480020758.01.T01:CDS
GATAAACTTGCTGATGCTGT+TGG 0.556730 4:-47835071 MsG0480020758.01.T01:CDS
GAGGAATTATATCTTTATTG+CGG 0.558872 4:+47833459 None:intergenic
CAATTCCAGCCTGCATAGCA+CGG 0.564119 4:+47835093 None:intergenic
AGGAACAATACCTTCCTCAA+TGG 0.564642 4:+47832623 None:intergenic
AGGATTTGGTGAGAGAAGAA+AGG 0.566687 4:-47833306 MsG0480020758.01.T01:CDS
CTAATGACTCAGCTGGAGAT+GGG 0.568805 4:-47834095 MsG0480020758.01.T01:CDS
GACAGACTCAGTTTACGACT+CGG 0.569507 4:-47832775 MsG0480020758.01.T01:CDS
ACCAATGCTGTACCTCCGCC+AGG 0.569522 4:+47832603 None:intergenic
TGCTAAATTATCTGGTGGAG+TGG 0.578652 4:-47832733 MsG0480020758.01.T01:CDS
TATTGCTGATGCTGCATCAA+AGG 0.580565 4:-47832844 MsG0480020758.01.T01:CDS
GCAGGAAGGCGAACCAACAT+GGG 0.584017 4:-47835196 MsG0480020758.01.T01:CDS
CACGCAGCTTGTTCACAACA+AGG 0.586245 4:+47833360 None:intergenic
TGGGATGGTCTTGACCACTC+AGG 0.597101 4:-47831815 MsG0480020758.01.T01:CDS
ATCATTGCCGAAGATATCAC+TGG 0.598076 4:-47833398 MsG0480020758.01.T01:CDS
TCTTCGGCAATGATAAGCAA+AGG 0.598336 4:+47833407 None:intergenic
CCTGATGCTATGGAAAATGC+TGG 0.601164 4:-47834292 MsG0480020758.01.T01:CDS
GGTGGTAGAATCCTTGGAGA+TGG 0.604265 4:+47832869 None:intergenic
TGCTACAGAGACCGAACTTG+AGG 0.605909 4:-47832691 MsG0480020758.01.T01:CDS
GTTGTGGAGAAAATTAGAAG+TGG 0.607273 4:-47831953 MsG0480020758.01.T01:CDS
TCGACCCTGCAAAGGTAACA+AGG 0.607538 4:-47831867 MsG0480020758.01.T01:intron
ACGGCGTGAATCTTGGTCAA+AGG 0.607568 4:+47835112 None:intergenic
AAGAGCTTGAGAAGTTGGCT+AGG 0.608935 4:-47833951 MsG0480020758.01.T01:CDS
TATTGCAATGTCTTGAAGGA+GGG 0.612191 4:+47833283 None:intergenic
TTGGCTAGGCCTGTTAAAGG+TGG 0.615079 4:-47833937 MsG0480020758.01.T01:CDS
AGGATTGCTAAATTATCTGG+TGG 0.617517 4:-47832738 MsG0480020758.01.T01:CDS
AAAGGATGAGTTGCAATCCA+GGG 0.618406 4:-47832826 MsG0480020758.01.T01:CDS
AATTAGAAGTGGTGAATGGG+AGG 0.619643 4:-47831942 MsG0480020758.01.T01:intron
CAAAGGGGCTCTCAATTGAG+TGG 0.620297 4:+47833424 None:intergenic
TTCAACAACAATGGCCTGAG+TGG 0.620610 4:+47831801 None:intergenic
TGTTGAAAAGCCTAAGCCCA+GGG 0.625995 4:-47831785 MsG0480020758.01.T01:CDS
AGATAATTTAGCAATCCTCT+CGG 0.626680 4:+47832743 None:intergenic
GGAAGGCGAACCAACATGGG+AGG 0.631849 4:-47835193 MsG0480020758.01.T01:CDS
ATATTGCAATGTCTTGAAGG+AGG 0.635052 4:+47833282 None:intergenic
GGAGTGGCAGTCATCAAGGT+CGG 0.637367 4:-47832717 MsG0480020758.01.T01:CDS
TGCCGAAGATATCACTGGTG+AGG 0.639474 4:-47833393 MsG0480020758.01.T01:CDS
TCGAAAAGTGACCATCTCCA+AGG 0.643733 4:-47832880 MsG0480020758.01.T01:CDS
GGCCTTACTCTCGGACCCCG+AGG 0.649612 4:-47835050 MsG0480020758.01.T01:intron
ACTCGGAGAAACTGGCCGAG+AGG 0.649780 4:-47832758 MsG0480020758.01.T01:CDS
AGGAATTGATAAAACAGTAG+CGG 0.654535 4:-47833983 MsG0480020758.01.T01:CDS
GAAGGCGAACCAACATGGGA+GGG 0.655547 4:-47835192 MsG0480020758.01.T01:CDS
GATTGCTGAAGCAATTGGCA+AGG 0.668567 4:-47833768 MsG0480020758.01.T01:intron
AGTCCTAAGGTTGTAAACGA+TGG 0.671771 4:-47834343 MsG0480020758.01.T01:CDS
ACAAACGAGTCTTAGCAGGA+AGG 0.673717 4:-47835210 MsG0480020758.01.T01:CDS
GCTGCGTGGTATCCTTAATG+TGG 0.674392 4:-47833345 MsG0480020758.01.T01:CDS
TTAAACGGTAAGGCCTTGTG+GGG 0.676362 4:+47831747 None:intergenic
AGCTGGAGATGGGACTACAA+CGG 0.691077 4:-47834085 MsG0480020758.01.T01:CDS
TGCAGCATCAGCAATAATGG+TGG 0.697793 4:+47832851 None:intergenic
TGGTGCAGCTCTAATTAGGG+AGG 0.702507 4:-47834272 MsG0480020758.01.T01:intron
ACGCAGCTTGTTCACAACAA+GGG 0.703024 4:+47833361 None:intergenic
GAGGAAGGTATTGTTCCTGG+CGG 0.718906 4:-47832618 MsG0480020758.01.T01:CDS
TTCGGCAATGATAAGCAAAG+GGG 0.721019 4:+47833409 None:intergenic
CTTGTTGTGAACAAGCTGCG+TGG 0.747846 4:-47833359 MsG0480020758.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAATATCTTATATTTGATA+CGG - Chr4:47834888-47834907 MsG0480020758.01.T01:intron 15.0%
!! TGTTTAATCATGTTAAATAA+TGG - Chr4:47833810-47833829 MsG0480020758.01.T01:CDS 15.0%
!!! AAATAATATCAACATTTTCA+GGG - Chr4:47834589-47834608 MsG0480020758.01.T01:intron 15.0%
!!! TAGTATTATTGCTATTATAT+GGG - Chr4:47832532-47832551 MsG0480020758.01.T01:intron 15.0%
!!! TATATGTATTCATTGTTTTT+TGG - Chr4:47833727-47833746 MsG0480020758.01.T01:intron 15.0%
!!! TTAGTATTATTGCTATTATA+TGG - Chr4:47832531-47832550 MsG0480020758.01.T01:intron 15.0%
!!! TTATTCTTTTTTGTTTGAAT+CGG - Chr4:47832792-47832811 MsG0480020758.01.T01:CDS 15.0%
!! AAAAAGGGATGAAAAATAAA+TGG + Chr4:47834845-47834864 None:intergenic 20.0%
!! ATAAGCTCAAATAAGTTAAT+CGG - Chr4:47832385-47832404 MsG0480020758.01.T01:intron 20.0%
!! GCTTGAAACATTAATTTATA+AGG + Chr4:47834627-47834646 None:intergenic 20.0%
!! TACTATAAGAACATTTGATT+TGG - Chr4:47833077-47833096 MsG0480020758.01.T01:intron 20.0%
!! TTGAATGTAATTATATGTGT+TGG - Chr4:47831960-47831979 MsG0480020758.01.T01:CDS 20.0%
!!! ATATTGATGAAGTTTTGATT+GGG + Chr4:47834875-47834894 None:intergenic 20.0%
!!! CAAATAATATCAACATTTTC+AGG - Chr4:47834588-47834607 MsG0480020758.01.T01:intron 20.0%
!!! CATAAACTAAATTTTTGAAC+AGG + Chr4:47833841-47833860 None:intergenic 20.0%
!!! GTTGTTTTAATAAACTATAC+CGG - Chr4:47832264-47832283 MsG0480020758.01.T01:intron 20.0%
!!! TTTGAAGATTTTTGTGTATA+TGG - Chr4:47832762-47832781 MsG0480020758.01.T01:CDS 20.0%
!!! TTTTTTTTTTTTTTGAAGGG+AGG - Chr4:47832578-47832597 MsG0480020758.01.T01:intron 20.0%
! AAAAGCAATAGAATTAGAAG+TGG + Chr4:47833373-47833392 None:intergenic 25.0%
! ACTCAAATTATCATATACCT+CGG + Chr4:47831938-47831957 None:intergenic 25.0%
! AGTACATTTCAAAAGATACA+TGG + Chr4:47832418-47832437 None:intergenic 25.0%
! CAGATTGTAAATTGTAATCA+TGG + Chr4:47834541-47834560 None:intergenic 25.0%
! CTCAAGATTTGTAACAAATT+GGG + Chr4:47833434-47833453 None:intergenic 25.0%
! GAGAGTTTATGTAAATAATC+TGG - Chr4:47832286-47832305 MsG0480020758.01.T01:intron 25.0%
! GAGGAATTATATCTTTATTG+CGG + Chr4:47833512-47833531 None:intergenic 25.0%
! GATTATTTACATAAACTCTC+CGG + Chr4:47832286-47832305 None:intergenic 25.0%
! GTACATTTCAAAAGATACAT+GGG + Chr4:47832417-47832436 None:intergenic 25.0%
! TAAAGATATAATTCCTCTGT+TGG - Chr4:47833515-47833534 MsG0480020758.01.T01:intron 25.0%
! TATAACAGAATAACCTGAAA+AGG + Chr4:47834693-47834712 None:intergenic 25.0%
! TCAAGATTTGTAACAAATTG+GGG + Chr4:47833433-47833452 None:intergenic 25.0%
! TCTCAAGATTTGTAACAAAT+TGG + Chr4:47833435-47833454 None:intergenic 25.0%
! TGATTGGGGAAAAATAAAAA+GGG + Chr4:47834860-47834879 None:intergenic 25.0%
! TTGATTGGGGAAAAATAAAA+AGG + Chr4:47834861-47834880 None:intergenic 25.0%
!! TGAATCTGAATGTATTTTTC+CGG - Chr4:47832115-47832134 MsG0480020758.01.T01:intron 25.0%
!! TTTTCCTTTTGTCTATGTAT+AGG - Chr4:47834936-47834955 MsG0480020758.01.T01:intron 25.0%
!! TTTTTGACATCTTTTCTTTC+CGG - Chr4:47833311-47833330 MsG0480020758.01.T01:CDS 25.0%
!!! AAATGGATTTTCTTGAAAAC+TGG + Chr4:47834828-47834847 None:intergenic 25.0%
!!! ATTTTTTTAGAAATGTGAGG+TGG - Chr4:47832452-47832471 MsG0480020758.01.T01:CDS 25.0%
!!! GATATTGATGAAGTTTTGAT+TGG + Chr4:47834876-47834895 None:intergenic 25.0%
!!! TATTGATGAAGTTTTGATTG+GGG + Chr4:47834874-47834893 None:intergenic 25.0%
!!! TGATGTTGATTTAAAACTGA+AGG - Chr4:47832838-47832857 MsG0480020758.01.T01:CDS 25.0%
!!! TGGATTTTTTTAGAAATGTG+AGG - Chr4:47832449-47832468 MsG0480020758.01.T01:CDS 25.0%
AAACAATAAGCATAGCATAC+TGG + Chr4:47834506-47834525 None:intergenic 30.0%
AAACCTACATTGTACATGAT+TGG + Chr4:47833786-47833805 None:intergenic 30.0%
AAAGGTGGAGATGATATAAA+AGG - Chr4:47833046-47833065 MsG0480020758.01.T01:intron 30.0%
AAGATTTGTAACAAATTGGG+GGG + Chr4:47833431-47833450 None:intergenic 30.0%
AATGCCTATACATAGACAAA+AGG + Chr4:47834943-47834962 None:intergenic 30.0%
ACATATATTATGATGCTTGC+AGG + Chr4:47833755-47833774 None:intergenic 30.0%
AGAAAATTAGAAGTGGTGAA+TGG - Chr4:47835022-47835041 MsG0480020758.01.T01:intron 30.0%
AGATAATTTAGCAATCCTCT+CGG + Chr4:47834228-47834247 None:intergenic 30.0%
AGGAATTGATAAAACAGTAG+CGG - Chr4:47832985-47833004 MsG0480020758.01.T01:intron 30.0%
CAAGATTTGTAACAAATTGG+GGG + Chr4:47833432-47833451 None:intergenic 30.0%
CACTTGCTTTAACAGTAAAA+CGG + Chr4:47831824-47831843 None:intergenic 30.0%
CTCAAATTATCATATACCTC+GGG + Chr4:47831937-47831956 None:intergenic 30.0%
CTTGAGAATTTAATTGAGTC+CGG - Chr4:47835073-47835092 MsG0480020758.01.T01:CDS 30.0%
GAAAATTAGAAGTGGTGAAT+GGG - Chr4:47835023-47835042 MsG0480020758.01.T01:intron 30.0%
TCAAATTATCATATACCTCG+GGG + Chr4:47831936-47831955 None:intergenic 30.0%
TCAATATTGCAATGTCTTGA+AGG + Chr4:47833692-47833711 None:intergenic 30.0%
TGACTTTGGATTTGCATAAA+TGG - Chr4:47832072-47832091 MsG0480020758.01.T01:intron 30.0%
TGGAGATGATATAAAAGGTA+TGG - Chr4:47833051-47833070 MsG0480020758.01.T01:intron 30.0%
TTATATGTGTTGTCTCATAC+TGG - Chr4:47832009-47832028 MsG0480020758.01.T01:CDS 30.0%
TTCAATTGAACAACTTGGTT+TGG - Chr4:47834064-47834083 MsG0480020758.01.T01:CDS 30.0%
TTCCAATTACAAACATTCAC+CGG + Chr4:47833333-47833352 None:intergenic 30.0%
! AAACAGGACAACATTTTATC+CGG + Chr4:47832137-47832156 None:intergenic 30.0%
! AAATGTACTTCTAGAAAGTG+TGG - Chr4:47832429-47832448 MsG0480020758.01.T01:CDS 30.0%
! ATTTTGTGCATTTAACTGCT+AGG - Chr4:47833996-47834015 MsG0480020758.01.T01:CDS 30.0%
! TATCAAGTATCAACCTTTTC+AGG - Chr4:47834677-47834696 MsG0480020758.01.T01:intron 30.0%
! TCTTTATTGCGGAAATCTTT+TGG + Chr4:47833501-47833520 None:intergenic 30.0%
! TTTTGTCTATGTATAGGCAT+TGG - Chr4:47834942-47834961 MsG0480020758.01.T01:intron 30.0%
!!! AATGTTGTTTTGGATGAGTT+TGG - Chr4:47832601-47832620 MsG0480020758.01.T01:intron 30.0%
!!! TTCTTTTTTGTTTGAATCGG+TGG - Chr4:47832795-47832814 MsG0480020758.01.T01:CDS 30.0%
AAATTCTCAAGTGTCTGTCA+TGG + Chr4:47835064-47835083 None:intergenic 35.0%
AACTTGTGTTTCCTTGTCAT+CGG + Chr4:47833947-47833966 None:intergenic 35.0%
AAGTTTACGATCCTCAAGTT+CGG + Chr4:47834291-47834310 None:intergenic 35.0%
AATAAGCTCTCTTTCCAAAC+AGG + Chr4:47832153-47832172 None:intergenic 35.0%
AATAATGGTGGTAGAATCCT+TGG + Chr4:47834108-47834127 None:intergenic 35.0%
AATAGAAGGTGAAGTAGTTG+TGG - Chr4:47834999-47835018 MsG0480020758.01.T01:intron 35.0%
AATCCTGTGTCAATCAAGAA+AGG - Chr4:47832965-47832984 MsG0480020758.01.T01:intron 35.0%
ACAATGATTGCTGAAGCAAT+TGG - Chr4:47833195-47833214 MsG0480020758.01.T01:intron 35.0%
AGCACTTCAATTGAACAACT+TGG - Chr4:47834059-47834078 MsG0480020758.01.T01:CDS 35.0%
AGGATTGCTAAATTATCTGG+TGG - Chr4:47834230-47834249 MsG0480020758.01.T01:intron 35.0%
AGTAAAACTAATGACTCAGC+TGG - Chr4:47832866-47832885 MsG0480020758.01.T01:CDS 35.0%
ATATCATCTCCACCTTTAAC+AGG + Chr4:47833043-47833062 None:intergenic 35.0%
ATATTGCAATGTCTTGAAGG+AGG + Chr4:47833689-47833708 None:intergenic 35.0%
ATTCCTTTCTTGATTGACAC+AGG + Chr4:47832971-47832990 None:intergenic 35.0%
CAAACAAGGAAACAGAGTAT+GGG + Chr4:47834724-47834743 None:intergenic 35.0%
CAAGACATTGCAATATTGAC+AGG - Chr4:47833693-47833712 MsG0480020758.01.T01:intron 35.0%
CTCTATGGATAAAAACCATC+AGG + Chr4:47833231-47833250 None:intergenic 35.0%
GAAAACATGGAATGTGACTT+TGG - Chr4:47832058-47832077 MsG0480020758.01.T01:intron 35.0%
GAGAGGATTGCTAAATTATC+TGG - Chr4:47834227-47834246 MsG0480020758.01.T01:intron 35.0%
GGATAAAATGTTGTCCTGTT+TGG - Chr4:47832136-47832155 MsG0480020758.01.T01:intron 35.0%
GGATCGTAAACTTAGAATTG+AGG - Chr4:47834298-47834317 MsG0480020758.01.T01:CDS 35.0%
GTTGTGGAGAAAATTAGAAG+TGG - Chr4:47835015-47835034 MsG0480020758.01.T01:intron 35.0%
TAGCATGACATTACAACAAC+TGG + Chr4:47833114-47833133 None:intergenic 35.0%
TATTGAGTTACCTGATGCTA+TGG - Chr4:47832666-47832685 MsG0480020758.01.T01:CDS 35.0%
TATTGCAATGTCTTGAAGGA+GGG + Chr4:47833688-47833707 None:intergenic 35.0%
TGTCCAATCATGTACAATGT+AGG - Chr4:47833780-47833799 MsG0480020758.01.T01:CDS 35.0%
TTCCGGTGAATGTTTGTAAT+TGG - Chr4:47833328-47833347 MsG0480020758.01.T01:CDS 35.0%
TTCTCTCAAATAGTGTCAGA+TGG - Chr4:47832347-47832366 MsG0480020758.01.T01:intron 35.0%
! ATCGGTTCTTTGTTGTATCA+TGG + Chr4:47833929-47833948 None:intergenic 35.0%
! ATGACTTGTAGATTGACAGA+GGG - Chr4:47833398-47833417 MsG0480020758.01.T01:CDS 35.0%
! CATACTCTGTTTCCTTGTTT+GGG - Chr4:47834723-47834742 MsG0480020758.01.T01:intron 35.0%
! CTTAGGCTTTTCAACAACAA+TGG + Chr4:47835179-47835198 None:intergenic 35.0%
! TATGACTTGTAGATTGACAG+AGG - Chr4:47833397-47833416 MsG0480020758.01.T01:CDS 35.0%
! TATTGCGGAAATCTTTTGGT+CGG + Chr4:47833497-47833516 None:intergenic 35.0%
! TCATTGATTGCTCAAAATGC+TGG - Chr4:47834976-47834995 MsG0480020758.01.T01:intron 35.0%
! TTGAAGTGCTTTCAACAAGA+AGG + Chr4:47834049-47834068 None:intergenic 35.0%
! TTGTTTGAATCGGTGGTTTT+TGG - Chr4:47832802-47832821 MsG0480020758.01.T01:CDS 35.0%
! TTTTGAGCAATCAATGATGC+AGG + Chr4:47834973-47834992 None:intergenic 35.0%
!! TCAACATTTTCAGGGTATTC+TGG - Chr4:47834597-47834616 MsG0480020758.01.T01:intron 35.0%
!!! GGAAAGAGAGCTTATTTTGT+AGG - Chr4:47832157-47832176 MsG0480020758.01.T01:intron 35.0%
!!! TTCTAGTTTTCCTTGATTGC+TGG + Chr4:47834410-47834429 None:intergenic 35.0%
AAAGGATGAGTTGCAATCCA+GGG - Chr4:47834142-47834161 MsG0480020758.01.T01:intron 40.0%
AATTAGAAGTGGTGAATGGG+AGG - Chr4:47835026-47835045 MsG0480020758.01.T01:intron 40.0%
ACAACAAAGAACCGATGACA+AGG - Chr4:47833933-47833952 MsG0480020758.01.T01:CDS 40.0%
ACACCATCGTTTACAACCTT+AGG + Chr4:47832631-47832650 None:intergenic 40.0%
AGGAACAATACCTTCCTCAA+TGG + Chr4:47834348-47834367 None:intergenic 40.0%
AGGAGCTGACATTGTTCAAA+AGG - Chr4:47834447-47834466 MsG0480020758.01.T01:intron 40.0%
AGTCCTAAGGTTGTAAACGA+TGG - Chr4:47832625-47832644 MsG0480020758.01.T01:CDS 40.0%
ATCATTGCCGAAGATATCAC+TGG - Chr4:47833570-47833589 MsG0480020758.01.T01:intron 40.0%
CCAAACAAGGAAACAGAGTA+TGG + Chr4:47834725-47834744 None:intergenic 40.0%
CCATACTCTGTTTCCTTGTT+TGG - Chr4:47834722-47834741 MsG0480020758.01.T01:intron 40.0%
CTGATGCGTTAGTGAAAACA+TGG - Chr4:47832045-47832064 MsG0480020758.01.T01:intron 40.0%
CTTCGGCAATGATAAGCAAA+GGG + Chr4:47833563-47833582 None:intergenic 40.0%
GCTCAAAATGCTGGAATAGA+AGG - Chr4:47834985-47835004 MsG0480020758.01.T01:intron 40.0%
TATTGCTGATGCTGCATCAA+AGG - Chr4:47834124-47834143 MsG0480020758.01.T01:intron 40.0%
TCTTCGGCAATGATAAGCAA+AGG + Chr4:47833564-47833583 None:intergenic 40.0%
TGACAAGGAAACACAAGTTG+TGG - Chr4:47833948-47833967 MsG0480020758.01.T01:CDS 40.0%
TGATAAAACAGTAGCGGCTT+TGG - Chr4:47832991-47833010 MsG0480020758.01.T01:intron 40.0%
TGATGCAGCATCAGCAATAA+TGG + Chr4:47834123-47834142 None:intergenic 40.0%
TGCTAAATTATCTGGTGGAG+TGG - Chr4:47834235-47834254 MsG0480020758.01.T01:intron 40.0%
TGCTTATGTTCCAGCAATCA+AGG - Chr4:47834397-47834416 MsG0480020758.01.T01:intron 40.0%
TGTAATTAACCCTCCCATGT+TGG + Chr4:47831788-47831807 None:intergenic 40.0%
TTCAAGCGTCATATAACTCG+TGG - Chr4:47834640-47834659 MsG0480020758.01.T01:intron 40.0%
TTCGGCAATGATAAGCAAAG+GGG + Chr4:47833562-47833581 None:intergenic 40.0%
TTTCTTCTCTCACCAAATCC+TGG + Chr4:47833663-47833682 None:intergenic 40.0%
! ACACTCATAAGAGCACAACA+AGG + Chr4:47834780-47834799 None:intergenic 40.0%
! CTGTTTCCTTGTTTGGGTAA+GGG - Chr4:47834729-47834748 MsG0480020758.01.T01:intron 40.0%
! TCTGTTTCCTTGTTTGGGTA+AGG - Chr4:47834728-47834747 MsG0480020758.01.T01:intron 40.0%
! TGTTTCCTTGTTTGGGTAAG+GGG - Chr4:47834730-47834749 MsG0480020758.01.T01:intron 40.0%
!! AGGATTTGGTGAGAGAAGAA+AGG - Chr4:47833662-47833681 MsG0480020758.01.T01:intron 40.0%
!! ATTGAGGAAGGTATTGTTCC+TGG - Chr4:47834347-47834366 MsG0480020758.01.T01:CDS 40.0%
!! GATAAACTTGCTGATGCTGT+TGG - Chr4:47831897-47831916 MsG0480020758.01.T01:intron 40.0%
!! GCTGGAAATGATGAGTTGAT+TGG - Chr4:47833171-47833190 MsG0480020758.01.T01:intron 40.0%
!! TGAAGGGAGGAATGTTGTTT+TGG - Chr4:47832591-47832610 MsG0480020758.01.T01:intron 40.0%
AAACGAGGAGGAAGACTCTA+TGG + Chr4:47833246-47833265 None:intergenic 45.0%
AACAAGAAGGCCCAAATCAC+TGG + Chr4:47834036-47834055 None:intergenic 45.0%
AACTAGAAGACGCAGATGAG+AGG - Chr4:47834422-47834441 MsG0480020758.01.T01:intron 45.0%
AAGAGCTTGAGAAGTTGGCT+AGG - Chr4:47833017-47833036 MsG0480020758.01.T01:intron 45.0%
AAGTTGGCTAGGCCTGTTAA+AGG - Chr4:47833028-47833047 MsG0480020758.01.T01:intron 45.0%
ACAAACGAGTCTTAGCAGGA+AGG - Chr4:47831758-47831777 MsG0480020758.01.T01:CDS 45.0%
ACTAATGACTCAGCTGGAGA+TGG - Chr4:47832872-47832891 MsG0480020758.01.T01:CDS 45.0%
AGATATCACTGGTGAGGCTT+TGG - Chr4:47833581-47833600 MsG0480020758.01.T01:intron 45.0%
AGCCTCACCAGTGATATCTT+CGG + Chr4:47833580-47833599 None:intergenic 45.0%
CAAAGGATGAGTTGCAATCC+AGG - Chr4:47834141-47834160 MsG0480020758.01.T01:intron 45.0%
CACACCTTGTTACCTTTGCA+GGG + Chr4:47835108-47835127 None:intergenic 45.0%
CATTCCTTCTTCGACTTCGA+CGG + Chr4:47833276-47833295 None:intergenic 45.0%
CCTGATGCTATGGAAAATGC+TGG - Chr4:47832676-47832695 MsG0480020758.01.T01:CDS 45.0%
CTAATGACTCAGCTGGAGAT+GGG - Chr4:47832873-47832892 MsG0480020758.01.T01:CDS 45.0%
GACAGACTCAGTTTACGACT+CGG - Chr4:47834193-47834212 MsG0480020758.01.T01:intron 45.0%
GATTGCTGAAGCAATTGGCA+AGG - Chr4:47833200-47833219 MsG0480020758.01.T01:intron 45.0%
GCTCGGGAAATCATTAAGCT+TGG - Chr4:47832917-47832936 MsG0480020758.01.T01:CDS 45.0%
GGCAGCAAAAGTTGCATTCT+TGG + Chr4:47834327-47834346 None:intergenic 45.0%
TCGAAAAGTGACCATCTCCA+AGG - Chr4:47834088-47834107 MsG0480020758.01.T01:CDS 45.0%
TGCAGCATCAGCAATAATGG+TGG + Chr4:47834120-47834139 None:intergenic 45.0%
TGTTGAAAAGCCTAAGCCCA+GGG - Chr4:47835183-47835202 MsG0480020758.01.T01:CDS 45.0%
TTCAACAACAATGGCCTGAG+TGG + Chr4:47835170-47835189 None:intergenic 45.0%
TTGTTGAAAAGCCTAAGCCC+AGG - Chr4:47835182-47835201 MsG0480020758.01.T01:CDS 45.0%
TTTCTTCAGTTGTGCAACCC+TGG + Chr4:47834162-47834181 None:intergenic 45.0%
! ACCAAATCCTGGAGCTTTGA+TGG + Chr4:47833652-47833671 None:intergenic 45.0%
! ACGCAGCTTGTTCACAACAA+GGG + Chr4:47833610-47833629 None:intergenic 45.0%
! ACTTTTGCTGCCATTGAGGA+AGG - Chr4:47834335-47834354 MsG0480020758.01.T01:CDS 45.0%
! AGTTTACGACTCGGAGAAAC+TGG - Chr4:47834202-47834221 MsG0480020758.01.T01:intron 45.0%
! ATGCTGGTGCAGCTCTAATT+AGG - Chr4:47832692-47832711 MsG0480020758.01.T01:CDS 45.0%
! CAGCTGTTGCTTCTATTTGC+TGG - Chr4:47833153-47833172 MsG0480020758.01.T01:intron 45.0%
! CCAGCATTTTCCATAGCATC+AGG + Chr4:47832679-47832698 None:intergenic 45.0%
! CTTTGATGGCAGCCACATTA+AGG + Chr4:47833638-47833657 None:intergenic 45.0%
! GACTACAACGGCTTCGATTT+TGG - Chr4:47832895-47832914 MsG0480020758.01.T01:CDS 45.0%
! GTGTCAGATGGTGTTTCTGT+CGG - Chr4:47832359-47832378 MsG0480020758.01.T01:intron 45.0%
! TAAAACAGTAGCGGCTTTGG+TGG - Chr4:47832994-47833013 MsG0480020758.01.T01:intron 45.0%
! TGAGTGGTTTTCTCCAACAG+AGG + Chr4:47833531-47833550 None:intergenic 45.0%
! TGCAACTTTTGCTGCCATTG+AGG - Chr4:47834331-47834350 MsG0480020758.01.T01:CDS 45.0%
! TGCTGGTGCAGCTCTAATTA+GGG - Chr4:47832693-47832712 MsG0480020758.01.T01:CDS 45.0%
! TTAAACGGTAAGGCCTTGTG+GGG + Chr4:47835224-47835243 None:intergenic 45.0%
!! ATTTATTTATTTATATAAAG+AGG + Chr4:47832488-47832507 None:intergenic 5.0%
!! TTTATTTATTTATATAAAGA+GGG + Chr4:47832487-47832506 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+GGG - Chr4:47832575-47832594 MsG0480020758.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+AGG - Chr4:47832574-47832593 MsG0480020758.01.T01:intron 5.0%
ACAACCGTCGAAGTCGAAGA+AGG - Chr4:47833269-47833288 MsG0480020758.01.T01:intron 50.0%
ACGGCGTGAATCTTGGTCAA+AGG + Chr4:47831859-47831878 None:intergenic 50.0%
AGAAGTGGTGAATGGGAGGT+TGG - Chr4:47835030-47835049 MsG0480020758.01.T01:intron 50.0%
AGCTGGAGATGGGACTACAA+CGG - Chr4:47832883-47832902 MsG0480020758.01.T01:CDS 50.0%
AGGCACAAACGAGTCTTAGC+AGG - Chr4:47831754-47831773 MsG0480020758.01.T01:CDS 50.0%
ATTGGCAAGGTTGGACCTGA+TGG - Chr4:47833213-47833232 MsG0480020758.01.T01:intron 50.0%
CAAAGGGGCTCTCAATTGAG+TGG + Chr4:47833547-47833566 None:intergenic 50.0%
CAATTCCAGCCTGCATAGCA+CGG + Chr4:47831878-47831897 None:intergenic 50.0%
CCTTTCCCCTTACCCAAACA+AGG + Chr4:47834738-47834757 None:intergenic 50.0%
CGAAGTCGAAGAAGGAATGG+AGG - Chr4:47833277-47833296 MsG0480020758.01.T01:CDS 50.0%
CGTCGAAGTCGAAGAAGGAA+TGG - Chr4:47833274-47833293 MsG0480020758.01.T01:intron 50.0%
GAGTTCCAGGCCAGTGATTT+GGG - Chr4:47834023-47834042 MsG0480020758.01.T01:CDS 50.0%
GCACACCTTGTTACCTTTGC+AGG + Chr4:47835109-47835128 None:intergenic 50.0%
GCCATCAAAGCTCCAGGATT+TGG - Chr4:47833648-47833667 MsG0480020758.01.T01:intron 50.0%
GCTGAAGCAATTGGCAAGGT+TGG - Chr4:47833204-47833223 MsG0480020758.01.T01:intron 50.0%
GCTGCGTGGTATCCTTAATG+TGG - Chr4:47833623-47833642 MsG0480020758.01.T01:intron 50.0%
GGACTTCTCAGTGTGACATC+AGG - Chr4:47832938-47832957 MsG0480020758.01.T01:CDS 50.0%
GGATGAGTTTGGCAGTCCTA+AGG - Chr4:47832612-47832631 MsG0480020758.01.T01:intron 50.0%
GGTGGAAGAGCTTGAGAAGT+TGG - Chr4:47833012-47833031 MsG0480020758.01.T01:intron 50.0%
GGTGGTAGAATCCTTGGAGA+TGG + Chr4:47834102-47834121 None:intergenic 50.0%
TCGACCCTGCAAAGGTAACA+AGG - Chr4:47835101-47835120 MsG0480020758.01.T01:CDS 50.0%
TGAGTTCCAGGCCAGTGATT+TGG - Chr4:47834022-47834041 MsG0480020758.01.T01:CDS 50.0%
TGCCGAAGATATCACTGGTG+AGG - Chr4:47833575-47833594 MsG0480020758.01.T01:intron 50.0%
TGCTACAGAGACCGAACTTG+AGG - Chr4:47834277-47834296 MsG0480020758.01.T01:CDS 50.0%
TTCGACGGTTGTCTCAAACG+AGG + Chr4:47833261-47833280 None:intergenic 50.0%
TTGGCTAGGCCTGTTAAAGG+TGG - Chr4:47833031-47833050 MsG0480020758.01.T01:intron 50.0%
! AGAATGCTGCTTCAGTGGCT+GGG - Chr4:47835134-47835153 MsG0480020758.01.T01:CDS 50.0%
! CACGCAGCTTGTTCACAACA+AGG + Chr4:47833611-47833630 None:intergenic 50.0%
! CCTTGTTTGGGTAAGGGGAA+AGG - Chr4:47834735-47834754 MsG0480020758.01.T01:intron 50.0%
! CTTGTTGTGAACAAGCTGCG+TGG - Chr4:47833609-47833628 MsG0480020758.01.T01:intron 50.0%
! TCTGCAGAATGCTGCTTCAG+TGG - Chr4:47835129-47835148 MsG0480020758.01.T01:CDS 50.0%
! TGGTGCAGCTCTAATTAGGG+AGG - Chr4:47832696-47832715 MsG0480020758.01.T01:CDS 50.0%
!! GAGGAAGGTATTGTTCCTGG+CGG - Chr4:47834350-47834369 MsG0480020758.01.T01:CDS 50.0%
!! GATGCTGTTGGCCTTACTCT+CGG - Chr4:47831909-47831928 MsG0480020758.01.T01:intron 50.0%
!!! AACGGCTTCGATTTTGGCTC+GGG - Chr4:47832901-47832920 MsG0480020758.01.T01:CDS 50.0%
!!! CAACGGCTTCGATTTTGGCT+CGG - Chr4:47832900-47832919 MsG0480020758.01.T01:CDS 50.0%
AGATTCACGCCGTGCTATGC+AGG - Chr4:47831866-47831885 MsG0480020758.01.T01:intron 55.0%
AGCAGGAAGGCGAACCAACA+TGG - Chr4:47831771-47831790 MsG0480020758.01.T01:CDS 55.0%
CTTTGCAGGGTCGATGACTC+CGG + Chr4:47835095-47835114 None:intergenic 55.0%
GAAGACGCAGATGAGAGGCT+AGG - Chr4:47834427-47834446 MsG0480020758.01.T01:intron 55.0%
GAAGGCGAACCAACATGGGA+GGG - Chr4:47831776-47831795 MsG0480020758.01.T01:CDS 55.0%
GACGGTTGTCTCAAACGAGG+AGG + Chr4:47833258-47833277 None:intergenic 55.0%
GCAGGAAGGCGAACCAACAT+GGG - Chr4:47831772-47831791 MsG0480020758.01.T01:CDS 55.0%
GCATAGCACGGCGTGAATCT+TGG + Chr4:47831866-47831885 None:intergenic 55.0%
GGAGTGGCAGTCATCAAGGT+CGG - Chr4:47834251-47834270 MsG0480020758.01.T01:intron 55.0%
TGGTGGAGTGGCAGTCATCA+AGG - Chr4:47834247-47834266 MsG0480020758.01.T01:intron 55.0%
! CAGAATGCTGCTTCAGTGGC+TGG - Chr4:47835133-47835152 MsG0480020758.01.T01:CDS 55.0%
! TGGGATGGTCTTGACCACTC+AGG - Chr4:47835153-47835172 MsG0480020758.01.T01:CDS 55.0%
!! ACTGCTAGGTGCTGAGTTCC+AGG - Chr4:47834010-47834029 MsG0480020758.01.T01:CDS 55.0%
!! GAAGGTATTGTTCCTGGCGG+AGG - Chr4:47834353-47834372 MsG0480020758.01.T01:CDS 55.0%
ACCAATGCTGTACCTCCGCC+AGG + Chr4:47834368-47834387 None:intergenic 60.0%
ACTCGGAGAAACTGGCCGAG+AGG - Chr4:47834210-47834229 MsG0480020758.01.T01:intron 60.0%
CGGAGTCATCGACCCTGCAA+AGG - Chr4:47835093-47835112 MsG0480020758.01.T01:CDS 60.0%
GAAGGCCCAAATCACTGGCC+TGG + Chr4:47834031-47834050 None:intergenic 60.0%
GGAAGGCGAACCAACATGGG+AGG - Chr4:47831775-47831794 MsG0480020758.01.T01:CDS 60.0%
GTGGCTGCCATCAAAGCTCC+AGG - Chr4:47833642-47833661 MsG0480020758.01.T01:intron 60.0%
TACCTCGGGGTCCGAGAGTA+AGG + Chr4:47831923-47831942 None:intergenic 60.0%
! TCCTGGCGGAGGTACAGCAT+TGG - Chr4:47834364-47834383 MsG0480020758.01.T01:CDS 60.0%
! TGCTGCTTCAGTGGCTGGGA+TGG - Chr4:47835138-47835157 MsG0480020758.01.T01:CDS 60.0%
TCACGCCGTGCTATGCAGGC+TGG - Chr4:47831870-47831889 MsG0480020758.01.T01:intron 65.0%
GCCTAAGCCCAGGGCAGCTG+CGG - Chr4:47835192-47835211 MsG0480020758.01.T01:CDS 70.0%
GGCCTTACTCTCGGACCCCG+AGG - Chr4:47831918-47831937 MsG0480020758.01.T01:intron 70.0%
GCAGCAGCCGCAGCTGCCCT+GGG + Chr4:47835202-47835221 None:intergenic 75.0%
GCCGCAGCTGCCCTGGGCTT+AGG + Chr4:47835196-47835215 None:intergenic 75.0%
GCTGCGGCTGCTGCCCCACA+AGG - Chr4:47835208-47835227 MsG0480020758.01.T01:CDS 75.0%
! GGCAGCAGCCGCAGCTGCCC+TGG + Chr4:47835203-47835222 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 47831747 47835243 47831747 ID=MsG0480020758.01;Name=MsG0480020758.01
Chr4 mRNA 47831747 47835243 47831747 ID=MsG0480020758.01.T01;Parent=MsG0480020758.01;Name=MsG0480020758.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0.37|0.11|1|1|1|9|0|491
Chr4 exon 47835051 47835243 47835051 ID=MsG0480020758.01.T01:exon:7366;Parent=MsG0480020758.01.T01
Chr4 exon 47834273 47834394 47834273 ID=MsG0480020758.01.T01:exon:7365;Parent=MsG0480020758.01.T01
Chr4 exon 47833918 47834130 47833918 ID=MsG0480020758.01.T01:exon:7364;Parent=MsG0480020758.01.T01
Chr4 exon 47833769 47833834 47833769 ID=MsG0480020758.01.T01:exon:7363;Parent=MsG0480020758.01.T01
Chr4 exon 47833276 47833507 47833276 ID=MsG0480020758.01.T01:exon:7362;Parent=MsG0480020758.01.T01
Chr4 exon 47832616 47832972 47832616 ID=MsG0480020758.01.T01:exon:7361;Parent=MsG0480020758.01.T01
Chr4 exon 47832410 47832483 47832410 ID=MsG0480020758.01.T01:exon:7360;Parent=MsG0480020758.01.T01
Chr4 exon 47831943 47832032 47831943 ID=MsG0480020758.01.T01:exon:7359;Parent=MsG0480020758.01.T01
Chr4 exon 47831747 47831875 47831747 ID=MsG0480020758.01.T01:exon:7358;Parent=MsG0480020758.01.T01
Chr4 CDS 47835051 47835243 47835051 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47834273 47834394 47834273 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47833918 47834130 47833918 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47833769 47833834 47833769 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47833276 47833507 47833276 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47832616 47832972 47832616 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47832410 47832483 47832410 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47831943 47832032 47831943 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Chr4 CDS 47831747 47831875 47831747 ID=MsG0480020758.01.T01:cds;Parent=MsG0480020758.01.T01
Gene Sequence

>MsG0480020758.01.T01

TTGTTTCAGGCACAAACGAGTCTTAGCAGGAAGGCGAACCAACATGGGAGGGTTAATTACAGACAGAAAGTTAACCGTTTTACTGTTAAAGCAAGTGCTAAAGATATTGCCTTTGACCAAGATTCACGCCGTGCTATGCAGGCTGGAATTGATAAACTTGCTGATGCTGTTGGCCTTACTCTCGGACCCCGAGGGAGGAATGTTGTTTTGGATGAGTTTGGCAGTCCTAAGGTTGTAAACGATGGTGTGACAATTGCAAGAGCTATTGAGTTACCTGATGCTATGGAAAATGCTGGTGCAGCTCTAATTAGGGAGGTTGCTAGTAAAACTAATGACTCAGCTGGAGATGGGACTACAACGGCTTCGATTTTGGCTCGGGAAATCATTAAGCTTGGACTTCTCAGTGTGACATCAGGTGCTAATCCTGTGTCAATCAAGAAAGGAATTGATAAAACAGTAGCGGCTTTGGTGGAAGAGCTTGAGAAGTTGGCTAGGCCTGTTAAAGGTGGAGATGATATAAAAGGTATGCTGTTGCTTCTATTTGCTGGAAATGATGAGTTGATTGGAACAATGATTGCTGAAGCAATTGGCAAGAGTCTTGATTACCGACCAAAAGATTTCCGCAATAAAGATATAATTCCTCTGTTGGAGAAAACCACTCAATTGAGAGCCCCTTTGCTTATCATTGCCGAAGATATCACTGGTGAGGCTTTGGCTACCCTTGTTGTGAACAAGCTGCGTGGTATCCTTAATGTGGCTGCCATCAAAGCTCCAGGATTTGGTGAGAGAAGAAAGGCCCTCCTTCAAGACATTGCAATATTGACAGGTGCTGAGTTCCAGGCCAGTGATTTGGGCCTTCTTGTTGAAAGCACTTCAATTGAACAACTTGGTTTGGCTCGAAAAGTGACCATCTCCAAGGATTCTACCACCATTATTGCTGATGCTGCATCAAAGGATGAGTTGCAATCCAGGGTTGCACAACTGAAGAAAGAGTTGTTTGAGACAGACTCAGTTTACGACTCGGAGAAACTGGCCGAGAGGATTGCTAAATTATCTGGTGGAGTGGCAGTCATCAAGGTCGGTGCTGCTACAGAGACCGAACTTGAGGATCGTAAACTTAGAATTGAGGATGCCAAGAATGCAACTTTTGCTGCCATTGAGGAAGGTATTGTTCCTGGCGGAGTATGCTATGCTTATTGTTTTCACGTCATGTTCCATGATTACAATTTACAATCTGAAAAAACACAAATTTACACTGCATTGGTAGCACCTGCATCATTGATTGCTCAAAATGCTGGAATAGAAGGTGAAGTAGTTGTGGAGAAAATTAGAAGTGGTGAATGGGAGGTAACAAGGTGTGCTCTGCAGAATGCTGCTTCAGTGGCTGGGATGGTCTTGACCACTCAGGCCATTGTTGTTGAAAAGCCTAAGCCCAGGGCAGCTGCGGCTGCTGCCCCACAAGGCCTTACCGTTTAA

Protein sequence

>MsG0480020758.01.T01

LFQAQTSLSRKANQHGRVNYRQKVNRFTVKASAKDIAFDQDSRRAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAALVEELEKLARPVKGGDDIKGMLLLLFAGNDELIGTMIAEAIGKSLDYRPKDFRNKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVESTSIEQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGVCYAYCFHVMFHDYNLQSEKTQIYTALVAPASLIAQNAGIEGEVVVEKIRSGEWEVTRCALQNAASVAGMVLTTQAIVVEKPKPRAAAAAAPQGLTV*