Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048925.01.T02 | XP_024628210.2 | 93.043 | 460 | 27 | 2 | 1 | 460 | 14 | 468 | 0 | 860 |
| MsG0080048925.01.T01 | XP_024628210.2 | 90.87 | 460 | 26 | 3 | 1 | 449 | 14 | 468 | 0 | 830 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048925.01.T01 | Q8GWA9 | 51.429 | 420 | 191 | 5 | 36 | 445 | 89 | 505 | 1.13E-144 | 425 |
| MsG0080048925.01.T02 | Q8GWA9 | 50.704 | 426 | 196 | 5 | 36 | 456 | 89 | 505 | 1.54E-144 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048925.01.T01 | A0A396K3J9 | 90.870 | 460 | 26 | 3 | 1 | 449 | 14 | 468 | 0.0 | 830 |
| MsG0080048925.01.T02 | A0A396K3J9 | 93.043 | 460 | 27 | 2 | 1 | 460 | 14 | 468 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047989.01 | MsG0080048925.01 | 0.813087 | 3.057350e-51 | 1.977460e-48 |
| MsG0080048528.01 | MsG0080048925.01 | 0.812354 | 4.422404e-51 | 2.805652e-48 |
| MsG0080048776.01 | MsG0080048925.01 | 0.827694 | 1.358277e-54 | 1.320974e-51 |
| MsG0080048777.01 | MsG0080048925.01 | 0.868306 | 7.201086e-66 | 2.592171e-62 |
| MsG0080048780.01 | MsG0080048925.01 | 0.815456 | 9.160547e-52 | 6.319112e-49 |
| MsG0080048801.01 | MsG0080048925.01 | 0.845816 | 3.207234e-59 | 5.411169e-56 |
| MsG0080048820.01 | MsG0080048925.01 | 0.852268 | 5.159869e-61 | 1.072439e-57 |
| MsG0080048925.01 | MsG0080049004.01 | 0.847047 | 1.480574e-59 | 2.598831e-56 |
| MsG0080048925.01 | MsG0080049039.01 | 0.837971 | 3.793609e-57 | 5.009634e-54 |
| MsG0080048925.01 | MsG0080049054.01 | 0.812685 | 3.742896e-51 | 2.395425e-48 |
| MsG0080048925.01 | MsG0180000193.01 | 0.803011 | 4.273041e-49 | 2.123758e-46 |
| MsG0080048925.01 | MsG0180000639.01 | 0.816333 | 5.836921e-52 | 4.124303e-49 |
| MsG0080048925.01 | MsG0180000792.01 | 0.806531 | 7.861190e-50 | 4.277017e-47 |
| MsG0080048925.01 | MsG0180001085.01 | 0.815304 | 9.899051e-52 | 6.799760e-49 |
| MsG0080048925.01 | MsG0180001138.01 | 0.824462 | 7.967577e-54 | 7.061719e-51 |
| MsG0080048925.01 | MsG0180001175.01 | 0.800175 | 1.630152e-48 | 7.539712e-46 |
| MsG0080048925.01 | MsG0180001371.01 | 0.804991 | 1.656136e-49 | 8.661761e-47 |
| MsG0080048925.01 | MsG0180001610.01 | 0.818036 | 2.416733e-52 | 1.789021e-49 |
| MsG0080048925.01 | MsG0180001929.01 | 0.832429 | 9.500188e-56 | 1.061550e-52 |
| MsG0080048925.01 | MsG0180002024.01 | 0.806175 | 9.347142e-50 | 5.039542e-47 |
| MsG0080048925.01 | MsG0180002671.01 | 0.811844 | 5.712972e-51 | 3.574475e-48 |
| MsG0080048925.01 | MsG0180002800.01 | 0.814781 | 1.293332e-51 | 8.758665e-49 |
| MsG0080048925.01 | MsG0180003296.01 | 0.806843 | 6.754492e-50 | 3.704592e-47 |
| MsG0080048925.01 | MsG0180003383.01 | 0.807173 | 5.752116e-50 | 3.181843e-47 |
| MsG0080048925.01 | MsG0180003453.01 | 0.815776 | 7.771444e-52 | 5.408309e-49 |
| MsG0080048925.01 | MsG0180003526.01 | 0.827690 | 1.361230e-54 | 1.323699e-51 |
| MsG0080048925.01 | MsG0180003986.01 | 0.840112 | 1.057926e-57 | 1.491856e-54 |
| MsG0080048925.01 | MsG0180004017.01 | 0.819562 | 1.087933e-52 | 8.401118e-50 |
| MsG0080048925.01 | MsG0180004103.01 | 0.803376 | 3.590163e-49 | 1.801230e-46 |
| MsG0080048925.01 | MsG0180004192.01 | 0.805039 | 1.618146e-49 | 8.473504e-47 |
| MsG0080048925.01 | MsG0180004428.01 | 0.824651 | 7.191947e-54 | 6.410208e-51 |
| MsG0080048925.01 | MsG0180004733.01 | 0.833295 | 5.789320e-56 | 6.638665e-53 |
| MsG0080048925.01 | MsG0180004852.01 | 0.810471 | 1.134109e-50 | 6.842205e-48 |
| MsG0080048925.01 | MsG0180005087.01 | 0.815623 | 8.407945e-52 | 5.826884e-49 |
| MsG0080048925.01 | MsG0180005135.01 | 0.810238 | 1.273310e-50 | 7.634832e-48 |
| MsG0080048925.01 | MsG0180005137.01 | 0.816523 | 5.291902e-52 | 3.758457e-49 |
| MsG0080048925.01 | MsG0180005276.01 | 0.824745 | 6.832609e-54 | 6.106517e-51 |
| MsG0080048925.01 | MsG0180005395.01 | -0.803981 | 2.689629e-49 | 1.370651e-46 |
| MsG0080048925.01 | MsG0180005492.01 | 0.814484 | 1.505300e-51 | 1.011325e-48 |
| MsG0080048925.01 | MsG0180005760.01 | 0.801923 | 7.160376e-49 | 3.461770e-46 |
| MsG0080048925.01 | MsG0180005918.01 | -0.801142 | 1.035288e-48 | 4.907483e-46 |
| MsG0080048925.01 | MsG0180005961.01 | 0.811807 | 5.820289e-51 | 3.637958e-48 |
| MsG0080048925.01 | MsG0180006042.01 | 0.808417 | 3.128677e-50 | 1.787963e-47 |
| MsG0080048925.01 | MsG0180006136.01 | 0.820913 | 5.335480e-53 | 4.277870e-50 |
| MsG0080048925.01 | MsG0180006142.01 | 0.800850 | 1.187884e-48 | 5.589294e-46 |
| MsG0080048925.01 | MsG0180006176.01 | 0.815019 | 1.145761e-51 | 7.809316e-49 |
| MsG0080048925.01 | MsG0280006400.01 | 0.826988 | 2.004951e-54 | 1.910317e-51 |
| MsG0080048925.01 | MsG0280006571.01 | 0.808536 | 2.951313e-50 | 1.691810e-47 |
| MsG0080048925.01 | MsG0280006718.01 | 0.854384 | 1.275729e-61 | 2.843900e-58 |
| MsG0080048925.01 | MsG0280006805.01 | 0.810477 | 1.130563e-50 | 6.821898e-48 |
| MsG0080048925.01 | MsG0280006825.01 | 0.830049 | 3.655069e-55 | 3.807640e-52 |
| MsG0080048925.01 | MsG0280006996.01 | 0.829419 | 5.202135e-55 | 5.321416e-52 |
| MsG0080048925.01 | MsG0280007079.01 | 0.836641 | 8.309689e-57 | 1.053477e-53 |
| MsG0080048925.01 | MsG0280007502.01 | 0.842950 | 1.890975e-58 | 2.913041e-55 |
| MsG0080048925.01 | MsG0280007702.01 | 0.811793 | 5.861538e-51 | 3.662461e-48 |
| MsG0080048925.01 | MsG0280007703.01 | 0.833508 | 5.122087e-56 | 5.911182e-53 |
| MsG0080048925.01 | MsG0280007754.01 | 0.821281 | 4.389263e-53 | 3.555215e-50 |
| MsG0080048925.01 | MsG0280007800.01 | 0.870226 | 1.713009e-66 | 6.613082e-63 |
| MsG0080048925.01 | MsG0280007814.01 | 0.822225 | 2.654070e-53 | 2.207993e-50 |
| MsG0080048925.01 | MsG0280007831.01 | 0.809119 | 2.214684e-50 | 1.289314e-47 |
| MsG0080048925.01 | MsG0280007852.01 | 0.824437 | 8.076301e-54 | 7.153259e-51 |
| MsG0080048925.01 | MsG0280008081.01 | 0.868563 | 5.951198e-66 | 2.162702e-62 |
| MsG0080048925.01 | MsG0280008388.01 | 0.815300 | 9.919947e-52 | 6.813349e-49 |
| MsG0080048925.01 | MsG0280008451.01 | 0.833534 | 5.047416e-56 | 5.829392e-53 |
| MsG0080048925.01 | MsG0280008591.01 | 0.854845 | 9.382429e-62 | 2.123935e-58 |
| MsG0080048925.01 | MsG0280008709.01 | 0.823172 | 1.598407e-53 | 1.365973e-50 |
| MsG0080048925.01 | MsG0280008922.01 | 0.820210 | 7.736330e-53 | 6.082819e-50 |
| MsG0080048925.01 | MsG0280008935.01 | 0.816893 | 4.372884e-52 | 3.137378e-49 |
| MsG0080048925.01 | MsG0280008942.01 | 0.840447 | 8.648433e-58 | 1.232275e-54 |
| MsG0080048925.01 | MsG0280009430.01 | 0.825729 | 3.998999e-54 | 3.675442e-51 |
| MsG0080048925.01 | MsG0280009431.01 | 0.814730 | 1.327493e-51 | 8.977960e-49 |
| MsG0080048925.01 | MsG0280009756.01 | 0.809480 | 1.853094e-50 | 1.089225e-47 |
| MsG0080048925.01 | MsG0280010016.01 | 0.833141 | 6.324312e-56 | 7.219254e-53 |
| MsG0080048925.01 | MsG0280010195.01 | 0.809546 | 1.793634e-50 | 1.056137e-47 |
| MsG0080048925.01 | MsG0280010353.01 | 0.820901 | 5.369625e-53 | 4.303856e-50 |
| MsG0080048925.01 | MsG0280010376.01 | 0.847066 | 1.462329e-59 | 2.568503e-56 |
| MsG0080048925.01 | MsG0280011162.01 | 0.817757 | 2.794592e-52 | 2.053098e-49 |
| MsG0080048925.01 | MsG0280011255.01 | 0.801076 | 1.067773e-48 | 5.053188e-46 |
| MsG0080048925.01 | MsG0280011273.01 | 0.866829 | 2.141703e-65 | 7.319467e-62 |
| MsG0080048925.01 | MsG0280011276.01 | 0.805603 | 1.232611e-49 | 6.548721e-47 |
| MsG0080048925.01 | MsG0380011534.01 | 0.810903 | 9.146381e-51 | 5.582429e-48 |
| MsG0080048925.01 | MsG0380011825.01 | 0.822146 | 2.769185e-53 | 2.298517e-50 |
| MsG0080048925.01 | MsG0380012625.01 | 0.829537 | 4.870278e-55 | 4.998851e-52 |
| MsG0080048925.01 | MsG0380014297.01 | -0.814021 | 1.904527e-51 | 1.263553e-48 |
| MsG0080048925.01 | MsG0380014411.01 | 0.826265 | 2.981985e-54 | 2.782821e-51 |
| MsG0080048925.01 | MsG0380014470.01 | 0.858756 | 6.622372e-63 | 1.708293e-59 |
| MsG0080048925.01 | MsG0380014909.01 | 0.803458 | 3.453133e-49 | 1.736161e-46 |
| MsG0080048925.01 | MsG0380015081.01 | 0.823291 | 1.499396e-53 | 1.285632e-50 |
| MsG0080048925.01 | MsG0380015356.01 | 0.808257 | 3.384886e-50 | 1.926319e-47 |
| MsG0080048925.01 | MsG0380015501.01 | 0.803700 | 3.076328e-49 | 1.556341e-46 |
| MsG0080048925.01 | MsG0380015603.01 | 0.835061 | 2.088949e-56 | 2.525542e-53 |
| MsG0080048925.01 | MsG0380015742.01 | 0.868669 | 5.498081e-66 | 2.005659e-62 |
| MsG0080048925.01 | MsG0380015743.01 | 0.878866 | 1.985584e-69 | 1.053216e-65 |
| MsG0080048925.01 | MsG0380015868.01 | 0.834035 | 3.782645e-56 | 4.434977e-53 |
| MsG0080048925.01 | MsG0380016188.01 | -0.802574 | 5.259830e-49 | 2.585380e-46 |
| MsG0080048925.01 | MsG0380016395.01 | 0.824336 | 8.528818e-54 | 7.532126e-51 |
| MsG0080048925.01 | MsG0380016478.01 | 0.821203 | 4.573178e-53 | 3.696571e-50 |
| MsG0080048925.01 | MsG0380016540.01 | 0.802586 | 5.228468e-49 | 2.570832e-46 |
| MsG0080048925.01 | MsG0380016544.01 | 0.811104 | 8.271725e-51 | 5.075364e-48 |
| MsG0080048925.01 | MsG0380016658.01 | 0.824605 | 7.374999e-54 | 6.564807e-51 |
| MsG0080048925.01 | MsG0380016699.01 | 0.806681 | 7.310020e-50 | 3.992211e-47 |
| MsG0080048925.01 | MsG0380016764.01 | 0.861304 | 1.127333e-63 | 3.175806e-60 |
| MsG0080048925.01 | MsG0380017028.01 | 0.840138 | 1.041246e-57 | 1.469578e-54 |
| MsG0080048925.01 | MsG0380017100.01 | 0.819000 | 1.461470e-52 | 1.111192e-49 |
| MsG0080048925.01 | MsG0380017472.01 | 0.809530 | 1.808214e-50 | 1.064254e-47 |
| MsG0080048925.01 | MsG0380017474.01 | 0.811520 | 6.720408e-51 | 4.169056e-48 |
| MsG0080048925.01 | MsG0380017509.01 | 0.824379 | 8.334575e-54 | 7.369706e-51 |
| MsG0080048925.01 | MsG0380017651.01 | 0.812026 | 5.214496e-51 | 3.278607e-48 |
| MsG0080048925.01 | MsG0380017727.01 | 0.814065 | 1.862355e-51 | 1.237067e-48 |
| MsG0080048925.01 | MsG0380017976.01 | 0.812158 | 4.880770e-51 | 3.079975e-48 |
| MsG0080048925.01 | MsG0380018037.01 | 0.804521 | 2.075835e-49 | 1.072544e-46 |
| MsG0080048925.01 | MsG0380018061.01 | 0.830915 | 2.243578e-55 | 2.397371e-52 |
| MsG0080048925.01 | MsG0380018069.01 | 0.821247 | 4.469536e-53 | 3.616835e-50 |
| MsG0080048925.01 | MsG0480018108.01 | 0.804226 | 2.391111e-49 | 1.226113e-46 |
| MsG0080048925.01 | MsG0480018323.01 | 0.800483 | 1.411016e-48 | 6.577465e-46 |
| MsG0080048925.01 | MsG0480018592.01 | 0.835440 | 1.676498e-56 | 2.050182e-53 |
| MsG0080048925.01 | MsG0480018644.01 | 0.802060 | 6.711990e-49 | 3.256319e-46 |
| MsG0080048925.01 | MsG0480018666.01 | 0.828467 | 8.845336e-55 | 8.799638e-52 |
| MsG0080048925.01 | MsG0480018676.01 | 0.841036 | 6.061593e-58 | 8.795323e-55 |
| MsG0080048925.01 | MsG0480020151.01 | 0.817712 | 2.859712e-52 | 2.098323e-49 |
| MsG0080048925.01 | MsG0480020229.01 | 0.804484 | 2.112600e-49 | 1.090531e-46 |
| MsG0080048925.01 | MsG0480020690.01 | 0.800577 | 1.350210e-48 | 6.309173e-46 |
| MsG0080048925.01 | MsG0480020758.01 | 0.811715 | 6.094689e-51 | 3.800229e-48 |
| MsG0080048925.01 | MsG0480020888.01 | 0.824356 | 8.437742e-54 | 7.455820e-51 |
| MsG0080048925.01 | MsG0480021168.01 | 0.814564 | 1.444951e-51 | 9.728802e-49 |
| MsG0080048925.01 | MsG0480021248.01 | 0.815835 | 7.542783e-52 | 5.256971e-49 |
| MsG0080048925.01 | MsG0480021597.01 | 0.835596 | 1.530670e-56 | 1.880591e-53 |
| MsG0080048925.01 | MsG0480021682.01 | 0.820835 | 5.560802e-53 | 4.448879e-50 |
| MsG0080048925.01 | MsG0480021777.01 | 0.800884 | 1.169099e-48 | 5.505731e-46 |
| MsG0080048925.01 | MsG0480021795.01 | 0.835729 | 1.416080e-56 | 1.746881e-53 |
| MsG0080048925.01 | MsG0480021803.01 | 0.831189 | 1.922380e-55 | 2.070697e-52 |
| MsG0080048925.01 | MsG0480022088.01 | 0.820571 | 6.391885e-53 | 5.076087e-50 |
| MsG0080048925.01 | MsG0480022149.01 | 0.819525 | 1.109733e-52 | 8.560604e-50 |
| MsG0080048925.01 | MsG0480022260.01 | 0.815240 | 1.022986e-51 | 7.014360e-49 |
| MsG0080048925.01 | MsG0480022297.01 | 0.820896 | 5.381964e-53 | 4.313192e-50 |
| MsG0080048925.01 | MsG0480022303.01 | -0.812121 | 4.973004e-51 | 3.134879e-48 |
| MsG0080048925.01 | MsG0480022665.01 | 0.813938 | 1.986636e-51 | 1.315000e-48 |
| MsG0080048925.01 | MsG0480022773.01 | 0.817881 | 2.619879e-52 | 1.931245e-49 |
| MsG0080048925.01 | MsG0480022994.01 | 0.811432 | 7.023406e-51 | 4.346876e-48 |
| MsG0080048925.01 | MsG0480023166.01 | 0.830946 | 2.204888e-55 | 2.358049e-52 |
| MsG0080048925.01 | MsG0480023314.01 | 0.835005 | 2.158354e-56 | 2.605278e-53 |
| MsG0080048925.01 | MsG0480023452.01 | 0.817345 | 3.460942e-52 | 2.513974e-49 |
| MsG0080048925.01 | MsG0480023483.01 | 0.819215 | 1.305523e-52 | 9.984177e-50 |
| MsG0080048925.01 | MsG0480023656.01 | 0.817386 | 3.387041e-52 | 2.463223e-49 |
| MsG0080048925.01 | MsG0480023661.01 | 0.819945 | 8.896739e-53 | 6.943892e-50 |
| MsG0080048925.01 | MsG0480023821.01 | 0.829653 | 4.562813e-55 | 4.699510e-52 |
| MsG0080048925.01 | MsG0480023845.01 | 0.851865 | 6.719098e-61 | 1.378413e-57 |
| MsG0080048925.01 | MsG0580024327.01 | 0.819048 | 1.425297e-52 | 1.085046e-49 |
| MsG0080048925.01 | MsG0580024385.01 | 0.800808 | 1.211494e-48 | 5.694031e-46 |
| MsG0080048925.01 | MsG0580024950.01 | 0.816100 | 6.582833e-52 | 4.621757e-49 |
| MsG0080048925.01 | MsG0580025366.01 | 0.819181 | 1.329311e-52 | 1.015641e-49 |
| MsG0080048925.01 | MsG0580025373.01 | 0.804655 | 1.946690e-49 | 1.009344e-46 |
| MsG0080048925.01 | MsG0580025513.01 | 0.804497 | 2.099824e-49 | 1.084274e-46 |
| MsG0080048925.01 | MsG0580025610.01 | 0.804353 | 2.249614e-49 | 1.157398e-46 |
| MsG0080048925.01 | MsG0580025845.01 | 0.817880 | 2.620932e-52 | 1.931998e-49 |
| MsG0080048925.01 | MsG0580025859.01 | 0.850626 | 1.503705e-60 | 2.963665e-57 |
| MsG0080048925.01 | MsG0580026271.01 | 0.809920 | 1.490606e-50 | 8.864141e-48 |
| MsG0080048925.01 | MsG0580027094.01 | 0.821308 | 4.325430e-53 | 3.506335e-50 |
| MsG0080048925.01 | MsG0580027394.01 | 0.838387 | 2.963460e-57 | 3.963107e-54 |
| MsG0080048925.01 | MsG0580027887.01 | 0.801570 | 8.460046e-49 | 4.053613e-46 |
| MsG0080048925.01 | MsG0580028912.01 | -0.803008 | 4.278168e-49 | 2.126172e-46 |
| MsG0080048925.01 | MsG0580029862.01 | 0.843473 | 1.371157e-58 | 2.147626e-55 |
| MsG0080048925.01 | MsG0580029918.01 | 0.802803 | 4.716902e-49 | 2.332273e-46 |
| MsG0080048925.01 | MsG0680030286.01 | 0.813922 | 2.003216e-51 | 1.325402e-48 |
| MsG0080048925.01 | MsG0680030470.01 | 0.813914 | 2.011193e-51 | 1.330404e-48 |
| MsG0080048925.01 | MsG0680030477.01 | 0.812923 | 3.321178e-51 | 2.138697e-48 |
| MsG0080048925.01 | MsG0680030516.01 | 0.848774 | 4.945107e-60 | 9.174846e-57 |
| MsG0080048925.01 | MsG0680030627.01 | 0.846473 | 2.124124e-59 | 3.660685e-56 |
| MsG0080048925.01 | MsG0680030767.01 | 0.831164 | 1.949085e-55 | 2.097902e-52 |
| MsG0080048925.01 | MsG0680030858.01 | 0.819291 | 1.254629e-52 | 9.614598e-50 |
| MsG0080048925.01 | MsG0680030957.01 | 0.813880 | 2.046275e-51 | 1.352430e-48 |
| MsG0080048925.01 | MsG0680031146.01 | 0.806129 | 9.555986e-50 | 5.146072e-47 |
| MsG0080048925.01 | MsG0680032160.01 | 0.838665 | 2.513146e-57 | 3.389495e-54 |
| MsG0080048925.01 | MsG0680032238.01 | 0.809975 | 1.450644e-50 | 8.638930e-48 |
| MsG0080048925.01 | MsG0680032496.01 | 0.803307 | 3.711063e-49 | 1.858559e-46 |
| MsG0080048925.01 | MsG0680033377.01 | 0.817745 | 2.812490e-52 | 2.065551e-49 |
| MsG0080048925.01 | MsG0680035731.01 | 0.829726 | 4.379824e-55 | 4.520963e-52 |
| MsG0080048925.01 | MsG0680035791.01 | 0.838184 | 3.344118e-57 | 4.444091e-54 |
| MsG0080048925.01 | MsG0780036385.01 | 0.804616 | 1.982794e-49 | 1.027024e-46 |
| MsG0080048925.01 | MsG0780036711.01 | 0.816362 | 5.750350e-52 | 4.066206e-49 |
| MsG0080048925.01 | MsG0780036715.01 | 0.823729 | 1.184173e-53 | 1.028186e-50 |
| MsG0080048925.01 | MsG0780037184.01 | 0.832269 | 1.040736e-55 | 1.157279e-52 |
| MsG0080048925.01 | MsG0780037436.01 | 0.803140 | 4.018072e-49 | 2.003749e-46 |
| MsG0080048925.01 | MsG0780038334.01 | 0.829790 | 4.227059e-55 | 4.371579e-52 |
| MsG0080048925.01 | MsG0780038341.01 | 0.805514 | 1.286891e-49 | 6.821408e-47 |
| MsG0080048925.01 | MsG0780038616.01 | 0.845849 | 3.142224e-59 | 5.306979e-56 |
| MsG0080048925.01 | MsG0780038784.01 | 0.855492 | 6.084802e-62 | 1.407333e-58 |
| MsG0080048925.01 | MsG0780039179.01 | 0.837351 | 5.472013e-57 | 7.088409e-54 |
| MsG0080048925.01 | MsG0780039186.01 | 0.820041 | 8.455199e-53 | 6.617603e-50 |
| MsG0080048925.01 | MsG0780039230.01 | 0.804872 | 1.753234e-49 | 9.142591e-47 |
| MsG0080048925.01 | MsG0780039746.01 | 0.838738 | 2.406076e-57 | 3.252317e-54 |
| MsG0080048925.01 | MsG0780039853.01 | 0.844093 | 9.357576e-59 | 1.494466e-55 |
| MsG0080048925.01 | MsG0780039876.01 | 0.824901 | 6.277029e-54 | 5.635099e-51 |
| MsG0080048925.01 | MsG0780039988.01 | 0.849472 | 3.163336e-60 | 6.003107e-57 |
| MsG0080048925.01 | MsG0780040331.01 | 0.809788 | 1.591343e-50 | 9.430731e-48 |
| MsG0080048925.01 | MsG0780040388.01 | 0.808888 | 2.481739e-50 | 1.435771e-47 |
| MsG0080048925.01 | MsG0780040484.01 | 0.829127 | 6.124819e-55 | 6.211635e-52 |
| MsG0080048925.01 | MsG0780040884.01 | 0.850079 | 2.140574e-60 | 4.144075e-57 |
| MsG0080048925.01 | MsG0780040972.01 | 0.827760 | 1.309031e-54 | 1.275577e-51 |
| MsG0080048925.01 | MsG0780041138.01 | 0.815487 | 9.015169e-52 | 6.224309e-49 |
| MsG0080048925.01 | MsG0780041174.01 | 0.850361 | 1.784223e-60 | 3.486130e-57 |
| MsG0080048925.01 | MsG0780041474.01 | 0.830995 | 2.145222e-55 | 2.297550e-52 |
| MsG0080048925.01 | MsG0780041480.01 | 0.806872 | 6.659923e-50 | 3.655375e-47 |
| MsG0080048925.01 | MsG0780041706.01 | 0.806016 | 1.009154e-49 | 5.419028e-47 |
| MsG0080048925.01 | MsG0880041931.01 | 0.842190 | 3.008116e-58 | 4.525017e-55 |
| MsG0080048925.01 | MsG0880041954.01 | 0.806018 | 1.008199e-49 | 5.414115e-47 |
| MsG0080048925.01 | MsG0880042044.01 | 0.814840 | 1.255339e-51 | 8.514775e-49 |
| MsG0080048925.01 | MsG0880042475.01 | 0.823519 | 1.325641e-53 | 1.144060e-50 |
| MsG0080048925.01 | MsG0880042890.01 | 0.802370 | 5.794643e-49 | 2.833708e-46 |
| MsG0080048925.01 | MsG0880043032.01 | 0.811529 | 6.690828e-51 | 4.151702e-48 |
| MsG0080048925.01 | MsG0880043277.01 | 0.840740 | 7.246207e-58 | 1.041901e-54 |
| MsG0080048925.01 | MsG0880043278.01 | 0.801882 | 7.299171e-49 | 3.525416e-46 |
| MsG0080048925.01 | MsG0880043913.01 | 0.823475 | 1.358135e-53 | 1.170580e-50 |
| MsG0080048925.01 | MsG0880044228.01 | 0.843286 | 1.538600e-58 | 2.395888e-55 |
| MsG0080048925.01 | MsG0880044487.01 | 0.819957 | 8.839745e-53 | 6.901957e-50 |
| MsG0080048925.01 | MsG0880044488.01 | 0.800845 | 1.190552e-48 | 5.601217e-46 |
| MsG0080048925.01 | MsG0880044547.01 | -0.812746 | 3.629590e-51 | 2.326601e-48 |
| MsG0080048925.01 | MsG0880044595.01 | 0.816432 | 5.548170e-52 | 3.930427e-49 |
| MsG0080048925.01 | MsG0880044985.01 | 0.816865 | 4.435953e-52 | 3.180292e-49 |
| MsG0080048925.01 | MsG0880045101.01 | 0.817101 | 3.927586e-52 | 2.833915e-49 |
| MsG0080048925.01 | MsG0880045328.01 | 0.879200 | 1.512818e-69 | 8.129437e-66 |
| MsG0080048925.01 | MsG0880045668.01 | 0.803160 | 3.980771e-49 | 1.986195e-46 |
| MsG0080048925.01 | MsG0880045697.01 | 0.830088 | 3.575783e-55 | 3.729233e-52 |
| MsG0080048925.01 | MsG0880046054.01 | 0.863827 | 1.884644e-64 | 5.791615e-61 |
| MsG0080048925.01 | MsG0880046104.01 | 0.819466 | 1.144650e-52 | 8.815519e-50 |
| MsG0080048925.01 | MsG0880046252.01 | 0.813338 | 2.692181e-51 | 1.753345e-48 |
| MsG0080048925.01 | MsG0880046382.01 | 0.815692 | 8.114426e-52 | 5.633733e-49 |
| MsG0080048925.01 | MsG0880046765.01 | 0.800457 | 1.428634e-48 | 6.655121e-46 |
| MsG0080048925.01 | MsG0880046791.01 | 0.807053 | 6.099839e-50 | 3.363655e-47 |
| MsG0080048925.01 | MsG0880047234.01 | 0.857880 | 1.206976e-62 | 3.023265e-59 |
| MsG0080048925.01 | MsG0880047407.01 | 0.829859 | 4.067112e-55 | 4.214666e-52 |
| MsG0080048925.01 | MsG0880047567.01 | 0.807712 | 4.420122e-50 | 2.479584e-47 |
| MsG0080048925.01 | MsG0880047578.01 | 0.829565 | 4.793749e-55 | 4.924294e-52 |
| MsG0080048925.01 | MsG0880047616.01 | 0.844036 | 9.690910e-59 | 1.545084e-55 |
| MsG0080048925.01 | MsG0880047669.01 | 0.805197 | 1.499525e-49 | 7.884300e-47 |
| MsG0080048925.01 | MsG0880047670.01 | 0.800718 | 1.263907e-48 | 5.926822e-46 |
| MsG0080048925.01 | MsG0880047770.01 | 0.817910 | 2.580400e-52 | 1.903621e-49 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048925.01.T02 | MTR_1g113720 | 90.217 | 460 | 26 | 3 | 1 | 460 | 14 | 454 | 0.0 | 821 |
| MsG0080048925.01.T01 | MTR_1g113720 | 88.043 | 460 | 25 | 4 | 1 | 449 | 14 | 454 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048925.01.T02 | AT2G17033 | 50.704 | 426 | 196 | 5 | 36 | 456 | 54 | 470 | 8.51e-146 | 425 |
| MsG0080048925.01.T02 | AT2G17033 | 50.704 | 426 | 196 | 5 | 36 | 456 | 89 | 505 | 1.57e-145 | 425 |
| MsG0080048925.01.T02 | AT2G17033 | 50.704 | 426 | 196 | 5 | 36 | 456 | 88 | 504 | 1.89e-145 | 425 |
| MsG0080048925.01.T02 | AT2G17033 | 50.704 | 426 | 196 | 5 | 36 | 456 | 85 | 501 | 2.38e-145 | 425 |
| MsG0080048925.01.T01 | AT2G17033 | 51.429 | 420 | 191 | 5 | 36 | 445 | 54 | 470 | 8.42e-146 | 424 |
| MsG0080048925.01.T01 | AT2G17033 | 51.429 | 420 | 191 | 5 | 36 | 445 | 89 | 505 | 1.15e-145 | 425 |
| MsG0080048925.01.T01 | AT2G17033 | 51.429 | 420 | 191 | 5 | 36 | 445 | 88 | 504 | 1.32e-145 | 425 |
| MsG0080048925.01.T01 | AT2G17033 | 51.429 | 420 | 191 | 5 | 36 | 445 | 85 | 501 | 1.46e-145 | 425 |
Find 88 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCTGGGTTCAGCTTATT+TGG | 0.208986 | contig542end:-10479 | MsG0080048925.01.T02:CDS |
| AATATGATTCTTTCAAGTTT+TGG | 0.242120 | contig542end:-10787 | MsG0080048925.01.T02:CDS |
| GGATTCTAAAGAGGTGAAAT+TGG | 0.277238 | contig542end:-10515 | MsG0080048925.01.T02:CDS |
| TGAAGTAGCTTCGGAAATTA+AGG | 0.315472 | contig542end:+11197 | MsG0080048925.01.T02:intergenic |
| CTTACAAGGATGAGGAATTC+TGG | 0.337094 | contig542end:-10730 | MsG0080048925.01.T02:CDS |
| TGTTGTGGATTTGAATGATT+TGG | 0.343073 | contig542end:-10644 | MsG0080048925.01.T02:CDS |
| AAGGTAAGGCTGTCAAAATT+TGG | 0.346114 | contig542end:-10246 | MsG0080048925.01.T02:CDS |
| GTTGATGAAATGGAGAATAA+TGG | 0.350749 | contig542end:-10835 | MsG0080048925.01.T02:CDS |
| GCCGGTTTGAGAAGCGCGTT+TGG | 0.359029 | contig542end:+11113 | MsG0080048925.01.T02:intergenic |
| CTTATTTGGTTATGTTGCTT+TGG | 0.360164 | contig542end:-10465 | MsG0080048925.01.T02:CDS |
| AGTATGTGGAAATGGTTTCT+TGG | 0.378531 | contig542end:-10753 | MsG0080048925.01.T02:CDS |
| GGAAATTAAGGTCTGGGATT+CGG | 0.380524 | contig542end:+11209 | MsG0080048925.01.T02:intergenic |
| TTTGTATGGATATGGAAGAT+TGG | 0.382413 | contig542end:-10884 | MsG0080048925.01.T02:CDS |
| GCCTCGTGAGGCTGAGAATC+TGG | 0.382565 | contig542end:-10980 | MsG0080048925.01.T02:CDS |
| CGGTGTAGCGTTTGTGTTTG+TGG | 0.383943 | contig542end:+11229 | MsG0080048925.01.T02:intergenic |
| TTGATGAAATGGAGAATAAT+GGG | 0.391709 | contig542end:-10834 | MsG0080048925.01.T02:CDS |
| ATGGGAAGCTACGGTGGTTA+AGG | 0.401506 | contig542end:-10581 | MsG0080048925.01.T02:CDS |
| TTGTATGGATATGGAAGATT+GGG | 0.404726 | contig542end:-10883 | MsG0080048925.01.T02:CDS |
| GAACAGAGTTGTTGATGAAA+TGG | 0.410686 | contig542end:-10845 | MsG0080048925.01.T02:CDS |
| TTTGGTTATGTTGCTTTGGT+TGG | 0.411930 | contig542end:-10461 | MsG0080048925.01.T02:CDS |
| TGAGGCTGAGAATCTGGTTC+GGG | 0.416550 | contig542end:-10974 | MsG0080048925.01.T02:CDS |
| AGCGTTTGTGTTTGTGGAGT+AGG | 0.421612 | contig542end:+11235 | MsG0080048925.01.T02:intergenic |
| TCACGAGGAGTATGTGGAAA+TGG | 0.423732 | contig542end:-10761 | MsG0080048925.01.T02:CDS |
| AGCTTCGGAAATTAAGGTCT+GGG | 0.429865 | contig542end:+11203 | MsG0080048925.01.T02:intergenic |
| GCTTATGAATCCATGATTAG+TGG | 0.441949 | contig542end:-11021 | MsG0080048925.01.T02:CDS |
| GCGTTTGTGTTTGTGGAGTA+GGG | 0.442569 | contig542end:+11236 | MsG0080048925.01.T02:intergenic |
| TCTCTTCTATGCAAAACTCT+TGG | 0.446048 | contig542end:-11145 | MsG0080048925.01.T02:CDS |
| GTGAGGCTGAGAATCTGGTT+CGG | 0.450440 | contig542end:-10975 | MsG0080048925.01.T02:CDS |
| GGTTATGTTGCTTTGGTTGG+AGG | 0.453621 | contig542end:-10458 | MsG0080048925.01.T02:CDS |
| TAGCTTCGGAAATTAAGGTC+TGG | 0.456742 | contig542end:+11202 | MsG0080048925.01.T02:intergenic |
| CTGCTTTGTTGCCAAAGGTA+AGG | 0.456812 | contig542end:-10260 | MsG0080048925.01.T02:CDS |
| CTGAAATCACTGTGGTCTGT+GGG | 0.457071 | contig542end:-10390 | MsG0080048925.01.T02:CDS |
| TCCAAACGCGCTTCTCAAAC+CGG | 0.458542 | contig542end:-11114 | MsG0080048925.01.T02:CDS |
| CAACATTCCTCATTATCGTT+GGG | 0.462227 | contig542end:+10662 | MsG0080048925.01.T02:intergenic |
| GTGGAGTAGGGTGATTAAAT+CGG | 0.462337 | contig542end:+11248 | MsG0080048925.01.T02:intergenic |
| AAAGTCCACTCAGGATTGAT+AGG | 0.466016 | contig542end:-10294 | MsG0080048925.01.T02:CDS |
| TTAAATCGGCGATGATGGTT+GGG | 0.470625 | contig542end:+11262 | MsG0080048925.01.T02:intergenic |
| ATCACTGTGGTCTGTGGGGT+TGG | 0.474623 | contig542end:-10385 | MsG0080048925.01.T02:CDS |
| GGTGATTAAATCGGCGATGA+TGG | 0.475107 | contig542end:+11257 | MsG0080048925.01.T02:intergenic |
| TGCACACAATCCACTAATCA+TGG | 0.475560 | contig542end:+11011 | MsG0080048925.01.T02:intergenic |
| TCTTTAAGCAATACTTTGAC+CGG | 0.476216 | contig542end:+10334 | MsG0080048925.01.T02:intergenic |
| ATTAAATCGGCGATGATGGT+TGG | 0.492033 | contig542end:+11261 | MsG0080048925.01.T02:intergenic |
| AAATGGTTTCTTGGCTTACA+AGG | 0.492833 | contig542end:-10744 | MsG0080048925.01.T02:CDS |
| AGAGTTGTTGAATGTGTGTA+TGG | 0.492964 | contig542end:-10608 | MsG0080048925.01.T02:CDS |
| TTGAAGAGGAAGTGTGAAGA+AGG | 0.494562 | contig542end:+11061 | MsG0080048925.01.T02:intergenic |
| CGTTGGGCAAGAATTTGAAA+CGG | 0.501944 | contig542end:+10678 | MsG0080048925.01.T02:intergenic |
| TTATAAGTTCTAACAGAAAA+CGG | 0.505009 | contig542end:+10703 | MsG0080048925.01.T02:intergenic |
| AAATTTGGTTATGTGAATTG+AGG | 0.506066 | contig542end:-10231 | MsG0080048925.01.T02:CDS |
| ACAACATTCCTCATTATCGT+TGG | 0.508259 | contig542end:+10661 | MsG0080048925.01.T02:intergenic |
| GGATTTGCATGGATTTCACC+TGG | 0.508564 | contig542end:-10494 | MsG0080048925.01.T02:CDS |
| TGGAATTCACGAGGAGTATG+TGG | 0.512841 | contig542end:-10767 | MsG0080048925.01.T02:CDS |
| TTTCTTGGCTTACAAGGATG+AGG | 0.513035 | contig542end:-10738 | MsG0080048925.01.T02:CDS |
| TGAATGTGTGTATGGAAGGA+TGG | 0.520905 | contig542end:-10600 | MsG0080048925.01.T02:CDS |
| TTTAAACAAACAGATGGTGG+TGG | 0.536003 | contig542end:-10949 | MsG0080048925.01.T02:CDS |
| GCTGAAATCACTGTGGTCTG+TGG | 0.537614 | contig542end:-10391 | MsG0080048925.01.T02:CDS |
| TTTCGATGAGGTGATGGTGT+GGG | 0.539150 | contig542end:-10536 | MsG0080048925.01.T02:CDS |
| ATTCTTGCCCAACGATAATG+AGG | 0.542535 | contig542end:-10669 | MsG0080048925.01.T02:CDS |
| GAGGTGAAATTGGATTTGCA+TGG | 0.550734 | contig542end:-10505 | MsG0080048925.01.T02:CDS |
| CGGGAATTTAAACAAACAGA+TGG | 0.561502 | contig542end:-10955 | MsG0080048925.01.T02:CDS |
| GCGTTTGACGTAAATTGAAG+AGG | 0.567328 | contig542end:+11047 | MsG0080048925.01.T02:intergenic |
| TTGTTGAATGTGTGTATGGA+AGG | 0.568777 | contig542end:-10604 | MsG0080048925.01.T02:CDS |
| GATTTGCATGGATTTCACCT+GGG | 0.577909 | contig542end:-10493 | MsG0080048925.01.T02:CDS |
| CAGACCACAGTGATTTCAGC+AGG | 0.584643 | contig542end:+10394 | MsG0080048925.01.T02:intergenic |
| AACGATAATGAGGAATGTTG+TGG | 0.586263 | contig542end:-10659 | MsG0080048925.01.T02:CDS |
| GGTTGGAGGAGATGCAGAAG+AGG | 0.586274 | contig542end:-10444 | MsG0080048925.01.T02:CDS |
| ACTGGCTGCTTTGTTGCCAA+AGG | 0.597676 | contig542end:-10265 | MsG0080048925.01.T02:CDS |
| TTAAACAAACAGATGGTGGT+GGG | 0.600043 | contig542end:-10948 | MsG0080048925.01.T02:CDS |
| GACTTGAATTCAAAAGCAGA+AGG | 0.600743 | contig542end:+10910 | MsG0080048925.01.T02:intergenic |
| AGAATAAGCGAAATCAAAGC+CGG | 0.605755 | contig542end:+11095 | MsG0080048925.01.T02:intergenic |
| AAGTGTGAAGAAGGTTGTTG+AGG | 0.610689 | contig542end:+11070 | MsG0080048925.01.T02:intergenic |
| GAATGTGTGTATGGAAGGAT+GGG | 0.610715 | contig542end:-10599 | MsG0080048925.01.T02:CDS |
| GCGAATCACAATGGTACACA+TGG | 0.610730 | contig542end:-11287 | MsG0080048925.01.T02:CDS |
| CAATGTGAGAGGAGAATCGC+CGG | 0.620006 | contig542end:-10353 | MsG0080048925.01.T02:CDS |
| GAATTTAAACAAACAGATGG+TGG | 0.622742 | contig542end:-10952 | MsG0080048925.01.T02:CDS |
| TGAAGATGAAAAGTCCACTC+AGG | 0.630228 | contig542end:-10303 | MsG0080048925.01.T02:CDS |
| ACCAGATTCTCAGCCTCACG+AGG | 0.633510 | contig542end:+10979 | MsG0080048925.01.T02:intergenic |
| TATGGAAGGATGGGAAGCTA+CGG | 0.639377 | contig542end:-10590 | MsG0080048925.01.T02:CDS |
| GATGGTGTGGGATTCTAAAG+AGG | 0.643782 | contig542end:-10524 | MsG0080048925.01.T02:CDS |
| TGAAATCACTGTGGTCTGTG+GGG | 0.648087 | contig542end:-10389 | MsG0080048925.01.T02:CDS |
| GGAAGGATGGGAAGCTACGG+TGG | 0.648287 | contig542end:-10587 | MsG0080048925.01.T02:CDS |
| GATTAGTGGATTGTGTGCAA+TGG | 0.654519 | contig542end:-11007 | MsG0080048925.01.T02:CDS |
| TAAGAATAAGCGAATCACAA+TGG | 0.660243 | contig542end:-11296 | MsG0080048925.01.T02:CDS |
| TTCTTCCTATCAATCCTGAG+TGG | 0.663898 | contig542end:+10289 | MsG0080048925.01.T02:intergenic |
| GGAAAGCATAGCAATGTGAG+AGG | 0.667903 | contig542end:-10364 | MsG0080048925.01.T02:CDS |
| AGGATTGATAGGAAGAACAC+TGG | 0.687654 | contig542end:-10283 | MsG0080048925.01.T02:CDS |
| TGCAATGGATAAGCCTCGTG+AGG | 0.694549 | contig542end:-10992 | MsG0080048925.01.T02:CDS |
| TAACCAAATAAGCTGAACCC+AGG | 0.706791 | contig542end:+10476 | MsG0080048925.01.T02:intergenic |
| GATTCCTGCTGAAATCACTG+TGG | 0.811897 | contig542end:-10398 | MsG0080048925.01.T02:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATGATTCTTTCAAGTTT+TGG | - | contig542end:11097-11116 | MsG0080048925.01.T02:CDS | 20.0% |
| !!! | TTATAAGTTCTAACAGAAAA+CGG | + | contig542end:11184-11203 | MsG0080048925.01.T02:intergenic | 20.0% |
| ! | AAATTTGGTTATGTGAATTG+AGG | - | contig542end:11653-11672 | MsG0080048925.01.T02:CDS | 25.0% |
| ! | GAATTTACGAATGAGATATT+CGG | + | contig542end:10385-10404 | MsG0080048925.01.T02:intergenic | 25.0% |
| ! | TTGATGAAATGGAGAATAAT+GGG | - | contig542end:11050-11069 | MsG0080048925.01.T02:CDS | 25.0% |
| !! | AAGTCTATTTTGTATGGATA+TGG | - | contig542end:10992-11011 | MsG0080048925.01.T02:CDS | 25.0% |
| !! | GAATTCAAGTCTATTTTGTA+TGG | - | contig542end:10986-11005 | MsG0080048925.01.T02:CDS | 25.0% |
| AAATGAGATGAGGGTAATTT+GGG | + | contig542end:10523-10542 | MsG0080048925.01.T02:intergenic | 30.0% | |
| GAATTTAAACAAACAGATGG+TGG | - | contig542end:10932-10951 | MsG0080048925.01.T02:CDS | 30.0% | |
| GAGATTATGAAATGAGATGA+GGG | + | contig542end:10532-10551 | MsG0080048925.01.T02:intergenic | 30.0% | |
| TAAGAATAAGCGAATCACAA+TGG | - | contig542end:10588-10607 | MsG0080048925.01.T02:CDS | 30.0% | |
| TCTTTAAGCAATACTTTGAC+CGG | + | contig542end:11553-11572 | MsG0080048925.01.T02:intergenic | 30.0% | |
| TGTTGTGGATTTGAATGATT+TGG | - | contig542end:11240-11259 | MsG0080048925.01.T02:CDS | 30.0% | |
| TTGTATGGATATGGAAGATT+GGG | - | contig542end:11001-11020 | MsG0080048925.01.T02:CDS | 30.0% | |
| TTTGTATGGATATGGAAGAT+TGG | - | contig542end:11000-11019 | MsG0080048925.01.T02:CDS | 30.0% | |
| ! | CTTATTTGGTTATGTTGCTT+TGG | - | contig542end:11419-11438 | MsG0080048925.01.T02:CDS | 30.0% |
| ! | GTTGATGAAATGGAGAATAA+TGG | - | contig542end:11049-11068 | MsG0080048925.01.T02:CDS | 30.0% |
| !! | ATATTCGGTATTGGTATTTG+TGG | + | contig542end:10370-10389 | MsG0080048925.01.T02:intergenic | 30.0% |
| !!! | GTTTTTTTTAAGACGAAGCT+GGG | + | contig542end:10286-10305 | MsG0080048925.01.T02:intergenic | 30.0% |
| !!! | TGTTTTTTTTAAGACGAAGC+TGG | + | contig542end:10287-10306 | MsG0080048925.01.T02:intergenic | 30.0% |
| AAATGGTTTCTTGGCTTACA+AGG | - | contig542end:11140-11159 | MsG0080048925.01.T02:CDS | 35.0% | |
| AACGATAATGAGGAATGTTG+TGG | - | contig542end:11225-11244 | MsG0080048925.01.T02:CDS | 35.0% | |
| AAGGTAAGGCTGTCAAAATT+TGG | - | contig542end:11638-11657 | MsG0080048925.01.T02:CDS | 35.0% | |
| AATGAGATGAGGGTAATTTG+GGG | + | contig542end:10522-10541 | MsG0080048925.01.T02:intergenic | 35.0% | |
| ACAACATTCCTCATTATCGT+TGG | + | contig542end:11226-11245 | MsG0080048925.01.T02:intergenic | 35.0% | |
| ACGAATGAGATATTCGGTAT+TGG | + | contig542end:10379-10398 | MsG0080048925.01.T02:intergenic | 35.0% | |
| AGAATAAGCGAAATCAAAGC+CGG | + | contig542end:10792-10811 | MsG0080048925.01.T02:intergenic | 35.0% | |
| AGAGTTGTTGAATGTGTGTA+TGG | - | contig542end:11276-11295 | MsG0080048925.01.T02:CDS | 35.0% | |
| AGTATGTGGAAATGGTTTCT+TGG | - | contig542end:11131-11150 | MsG0080048925.01.T02:CDS | 35.0% | |
| CAACATTCCTCATTATCGTT+GGG | + | contig542end:11225-11244 | MsG0080048925.01.T02:intergenic | 35.0% | |
| CGGGAATTTAAACAAACAGA+TGG | - | contig542end:10929-10948 | MsG0080048925.01.T02:CDS | 35.0% | |
| GAAATGAGATGAGGGTAATT+TGG | + | contig542end:10524-10543 | MsG0080048925.01.T02:intergenic | 35.0% | |
| GACTTGAATTCAAAAGCAGA+AGG | + | contig542end:10977-10996 | MsG0080048925.01.T02:intergenic | 35.0% | |
| GAGAAAAGAGTTAACTTACG+GGG | + | contig542end:10500-10519 | MsG0080048925.01.T02:intergenic | 35.0% | |
| GCTTATGAATCCATGATTAG+TGG | - | contig542end:10863-10882 | MsG0080048925.01.T02:CDS | 35.0% | |
| GGAGAAAAGAGTTAACTTAC+GGG | + | contig542end:10501-10520 | MsG0080048925.01.T02:intergenic | 35.0% | |
| GGAGATTATGAAATGAGATG+AGG | + | contig542end:10533-10552 | MsG0080048925.01.T02:intergenic | 35.0% | |
| GGGAGAAAAGAGTTAACTTA+CGG | + | contig542end:10502-10521 | MsG0080048925.01.T02:intergenic | 35.0% | |
| TCTCTTCTATGCAAAACTCT+TGG | - | contig542end:10739-10758 | MsG0080048925.01.T02:CDS | 35.0% | |
| TGAAGTAGCTTCGGAAATTA+AGG | + | contig542end:10690-10709 | MsG0080048925.01.T02:intergenic | 35.0% | |
| TTGTTGAATGTGTGTATGGA+AGG | - | contig542end:11280-11299 | MsG0080048925.01.T02:CDS | 35.0% | |
| ! | GAACAGAGTTGTTGATGAAA+TGG | - | contig542end:11039-11058 | MsG0080048925.01.T02:CDS | 35.0% |
| ! | GGATTCTAAAGAGGTGAAAT+TGG | - | contig542end:11369-11388 | MsG0080048925.01.T02:intron | 35.0% |
| ! | GTGTAATGTGATTTTCGATG+AGG | - | contig542end:11336-11355 | MsG0080048925.01.T02:intron | 35.0% |
| ! | TTAAACAAACAGATGGTGGT+GGG | - | contig542end:10936-10955 | MsG0080048925.01.T02:CDS | 35.0% |
| ! | TTTAAACAAACAGATGGTGG+TGG | - | contig542end:10935-10954 | MsG0080048925.01.T02:CDS | 35.0% |
| !! | AAGAAATGGAAGGGTTAGTT+TGG | + | contig542end:10554-10573 | MsG0080048925.01.T02:intergenic | 35.0% |
| !! | AATTTTGACAGCCTTACCTT+TGG | + | contig542end:11638-11657 | MsG0080048925.01.T02:intergenic | 35.0% |
| !! | TTTGGTTATGTTGCTTTGGT+TGG | - | contig542end:11423-11442 | MsG0080048925.01.T02:CDS | 35.0% |
| !!! | GTTGAGTTTTGAAGTAGCTT+CGG | + | contig542end:10699-10718 | MsG0080048925.01.T02:intergenic | 35.0% |
| !!! | TTCAAGTTTTGGAATTCACG+AGG | - | contig542end:11108-11127 | MsG0080048925.01.T02:CDS | 35.0% |
| AAAAGAGTTAACTTACGGGG+AGG | + | contig542end:10497-10516 | MsG0080048924.01.T03:intergenic | 40.0% | |
| AAAGAGTTAACTTACGGGGA+GGG | + | contig542end:10496-10515 | MsG0080048924.01.T03:intergenic | 40.0% | |
| AAAGTCCACTCAGGATTGAT+AGG | - | contig542end:11590-11609 | MsG0080048925.01.T02:CDS | 40.0% | |
| AAGTGTGAAGAAGGTTGTTG+AGG | + | contig542end:10817-10836 | MsG0080048925.01.T02:intergenic | 40.0% | |
| AGCTGCAACAAGAAATGGAA+GGG | + | contig542end:10563-10582 | MsG0080048925.01.T02:intergenic | 40.0% | |
| AGCTTCGGAAATTAAGGTCT+GGG | + | contig542end:10684-10703 | MsG0080048925.01.T02:intergenic | 40.0% | |
| AGGATTGATAGGAAGAACAC+TGG | - | contig542end:11601-11620 | MsG0080048925.01.T02:CDS | 40.0% | |
| ATTCTTGCCCAACGATAATG+AGG | - | contig542end:11215-11234 | MsG0080048925.01.T02:CDS | 40.0% | |
| CGTTGGGCAAGAATTTGAAA+CGG | + | contig542end:11209-11228 | MsG0080048925.01.T02:intergenic | 40.0% | |
| CTTACAAGGATGAGGAATTC+TGG | - | contig542end:11154-11173 | MsG0080048925.01.T02:CDS | 40.0% | |
| GAATGTGTGTATGGAAGGAT+GGG | - | contig542end:11285-11304 | MsG0080048925.01.T02:CDS | 40.0% | |
| GAGGTGAAATTGGATTTGCA+TGG | - | contig542end:11379-11398 | MsG0080048925.01.T02:intron | 40.0% | |
| GATTTGCATGGATTTCACCT+GGG | - | contig542end:11391-11410 | MsG0080048925.01.T02:intron | 40.0% | |
| GCGTTTGACGTAAATTGAAG+AGG | + | contig542end:10840-10859 | MsG0080048925.01.T02:intergenic | 40.0% | |
| GTGGAGTAGGGTGATTAAAT+CGG | + | contig542end:10639-10658 | MsG0080048925.01.T02:intergenic | 40.0% | |
| GTTGCACTCTAACGAAACAA+GGG | - | contig542end:10319-10338 | MsG0080048925.01.T02:CDS | 40.0% | |
| TAACCAAATAAGCTGAACCC+AGG | + | contig542end:11411-11430 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TAGCTTCGGAAATTAAGGTC+TGG | + | contig542end:10685-10704 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TGAAGATGAAAAGTCCACTC+AGG | - | contig542end:11581-11600 | MsG0080048925.01.T02:CDS | 40.0% | |
| TGAATGTGTGTATGGAAGGA+TGG | - | contig542end:11284-11303 | MsG0080048925.01.T02:CDS | 40.0% | |
| TGCACACAATCCACTAATCA+TGG | + | contig542end:10876-10895 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TGTAGAGCTGCAACAAGAAA+TGG | + | contig542end:10568-10587 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TTCTTCCTATCAATCCTGAG+TGG | + | contig542end:11598-11617 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TTTCGTTAGAGTGCAACGAA+TGG | + | contig542end:10316-10335 | MsG0080048925.01.T02:intergenic | 40.0% | |
| TTTCTTGGCTTACAAGGATG+AGG | - | contig542end:11146-11165 | MsG0080048925.01.T02:CDS | 40.0% | |
| ! | ATTAAATCGGCGATGATGGT+TGG | + | contig542end:10626-10645 | MsG0080048925.01.T02:intergenic | 40.0% |
| ! | GGAAATTAAGGTCTGGGATT+CGG | + | contig542end:10678-10697 | MsG0080048925.01.T02:intergenic | 40.0% |
| ! | TGTGATTTTCGATGAGGTGA+TGG | - | contig542end:11342-11361 | MsG0080048925.01.T02:intron | 40.0% |
| ! | TTAAATCGGCGATGATGGTT+GGG | + | contig542end:10625-10644 | MsG0080048925.01.T02:intergenic | 40.0% |
| ! | TTGAAGAGGAAGTGTGAAGA+AGG | + | contig542end:10826-10845 | MsG0080048925.01.T02:intergenic | 40.0% |
| !! | GATTAGTGGATTGTGTGCAA+TGG | - | contig542end:10877-10896 | MsG0080048925.01.T02:CDS | 40.0% |
| !! | TTGTGGTTGAGAGTTTTGTG+AGG | + | contig542end:10353-10372 | MsG0080048925.01.T02:intergenic | 40.0% |
| !!! | TTTTAAGACGAAGCTGGGTT+TGG | + | contig542end:10281-10300 | MsG0080048925.01.T02:intergenic | 40.0% |
| AGCGTTTGTGTTTGTGGAGT+AGG | + | contig542end:10652-10671 | MsG0080048925.01.T02:intergenic | 45.0% | |
| AGTGAGAGTGGAGAGTAGTA+CGG | + | contig542end:10427-10446 | MsG0080048925.01.T02:intergenic | 45.0% | |
| AGTGGAGAGTAGTACGGATT+TGG | + | contig542end:10421-10440 | MsG0080048925.01.T02:intergenic | 45.0% | |
| CGTTGCACTCTAACGAAACA+AGG | - | contig542end:10318-10337 | MsG0080048925.01.T02:CDS | 45.0% | |
| CTGAAATCACTGTGGTCTGT+GGG | - | contig542end:11494-11513 | MsG0080048925.01.T02:CDS | 45.0% | |
| GAGCTGCAACAAGAAATGGA+AGG | + | contig542end:10564-10583 | MsG0080048925.01.T02:intergenic | 45.0% | |
| GATTCCTGCTGAAATCACTG+TGG | - | contig542end:11486-11505 | MsG0080048925.01.T02:CDS | 45.0% | |
| GCGAATCACAATGGTACACA+TGG | - | contig542end:10597-10616 | MsG0080048925.01.T02:CDS | 45.0% | |
| GCGTTTGTGTTTGTGGAGTA+GGG | + | contig542end:10651-10670 | MsG0080048925.01.T02:intergenic | 45.0% | |
| GGATTTGCATGGATTTCACC+TGG | - | contig542end:11390-11409 | MsG0080048925.01.T02:intron | 45.0% | |
| GGTGATTAAATCGGCGATGA+TGG | + | contig542end:10630-10649 | MsG0080048925.01.T02:intergenic | 45.0% | |
| GTGGAGAGTAGTACGGATTT+GGG | + | contig542end:10420-10439 | MsG0080048925.01.T02:intergenic | 45.0% | |
| TATGGAAGGATGGGAAGCTA+CGG | - | contig542end:11294-11313 | MsG0080048925.01.T02:CDS | 45.0% | |
| TCACCTGGGTTCAGCTTATT+TGG | - | contig542end:11405-11424 | MsG0080048925.01.T02:intron | 45.0% | |
| TGAAATCACTGTGGTCTGTG+GGG | - | contig542end:11495-11514 | MsG0080048925.01.T02:CDS | 45.0% | |
| ! | CTGCTTTGTTGCCAAAGGTA+AGG | - | contig542end:11624-11643 | MsG0080048925.01.T02:CDS | 45.0% |
| ! | GATGGTGTGGGATTCTAAAG+AGG | - | contig542end:11360-11379 | MsG0080048925.01.T02:intron | 45.0% |
| ! | GGAAAGCATAGCAATGTGAG+AGG | - | contig542end:11520-11539 | MsG0080048925.01.T02:CDS | 45.0% |
| ! | TCACGAGGAGTATGTGGAAA+TGG | - | contig542end:11123-11142 | MsG0080048925.01.T02:CDS | 45.0% |
| ! | TGGAATTCACGAGGAGTATG+TGG | - | contig542end:11117-11136 | MsG0080048925.01.T02:CDS | 45.0% |
| ! | TTTCGATGAGGTGATGGTGT+GGG | - | contig542end:11348-11367 | MsG0080048925.01.T02:intron | 45.0% |
| !! | GGTTATGTTGCTTTGGTTGG+AGG | - | contig542end:11426-11445 | MsG0080048925.01.T02:CDS | 45.0% |
| !! | TTTTCGATGAGGTGATGGTG+TGG | - | contig542end:11347-11366 | MsG0080048925.01.T02:intron | 45.0% |
| ATGGGAAGCTACGGTGGTTA+AGG | - | contig542end:11303-11322 | MsG0080048925.01.T02:CDS | 50.0% | |
| CAATGTGAGAGGAGAATCGC+CGG | - | contig542end:11531-11550 | MsG0080048925.01.T02:CDS | 50.0% | |
| CAGACCACAGTGATTTCAGC+AGG | + | contig542end:11493-11512 | MsG0080048925.01.T02:intergenic | 50.0% | |
| CGGTGTAGCGTTTGTGTTTG+TGG | + | contig542end:10658-10677 | MsG0080048925.01.T02:intergenic | 50.0% | |
| GAGTAGTACGGATTTGGGTG+AGG | + | contig542end:10415-10434 | MsG0080048925.01.T02:intergenic | 50.0% | |
| GCTGAAATCACTGTGGTCTG+TGG | - | contig542end:11493-11512 | MsG0080048925.01.T02:CDS | 50.0% | |
| GTGAGGCTGAGAATCTGGTT+CGG | - | contig542end:10909-10928 | MsG0080048925.01.T02:CDS | 50.0% | |
| TCCAAACGCGCTTCTCAAAC+CGG | - | contig542end:10770-10789 | MsG0080048925.01.T02:CDS | 50.0% | |
| TGCAATGGATAAGCCTCGTG+AGG | - | contig542end:10892-10911 | MsG0080048925.01.T02:CDS | 50.0% | |
| ! | ACTGGCTGCTTTGTTGCCAA+AGG | - | contig542end:11619-11638 | MsG0080048925.01.T02:CDS | 50.0% |
| ! | TGAGGCTGAGAATCTGGTTC+GGG | - | contig542end:10910-10929 | MsG0080048925.01.T02:CDS | 50.0% |
| ACCAGATTCTCAGCCTCACG+AGG | + | contig542end:10908-10927 | MsG0080048925.01.T02:intergenic | 55.0% | |
| AGAGAGGAGGTGAGTGAGAG+TGG | + | contig542end:10439-10458 | MsG0080048925.01.T02:intergenic | 55.0% | |
| ATCACTGTGGTCTGTGGGGT+TGG | - | contig542end:11499-11518 | MsG0080048925.01.T02:CDS | 55.0% | |
| GGTTGGAGGAGATGCAGAAG+AGG | - | contig542end:11440-11459 | MsG0080048925.01.T02:CDS | 55.0% | |
| ! | AGAAGAGAGGTGGTGGTGAG+TGG | + | contig542end:10469-10488 | MsG0080048925.01.T02:intergenic | 55.0% |
| ! | AGCTGGGTTTGGAGTTGAGG+AGG | + | contig542end:10270-10289 | MsG0080048925.01.T02:intergenic | 55.0% |
| ! | CGAAGCTGGGTTTGGAGTTG+AGG | + | contig542end:10273-10292 | MsG0080048925.01.T02:intergenic | 55.0% |
| ! | TGGGTTTGGAGTTGAGGAGG+AGG | + | contig542end:10267-10286 | MsG0080048925.01.T02:intergenic | 55.0% |
| GCCTCGTGAGGCTGAGAATC+TGG | - | contig542end:10904-10923 | MsG0080048925.01.T02:CDS | 60.0% | |
| GGAAGGATGGGAAGCTACGG+TGG | - | contig542end:11297-11316 | MsG0080048925.01.T02:CDS | 60.0% | |
| ! | AGAGAGGTGGTGGTGAGTGG+TGG | + | contig542end:10466-10485 | MsG0080048925.01.T02:intergenic | 60.0% |
| ! | AGGTGGTGGTGAGTGGTGGT+GGG | + | contig542end:10462-10481 | MsG0080048925.01.T02:intergenic | 60.0% |
| !! | GCCGGTTTGAGAAGCGCGTT+TGG | + | contig542end:10774-10793 | MsG0080048925.01.T02:intergenic | 60.0% |
| GGAGGGCGAGAGAAGAGAGG+TGG | + | contig542end:10479-10498 | MsG0080048925.01.T02:intergenic | 65.0% | |
| GGGCGAGAGAAGAGAGGTGG+TGG | + | contig542end:10476-10495 | MsG0080048925.01.T02:intergenic | 65.0% | |
| ! | GAGGTGGTGGTGAGTGGTGG+TGG | + | contig542end:10463-10482 | MsG0080048925.01.T02:intergenic | 65.0% |
| !! | GAGTGGTGGTGGGAGAGAGG+AGG | + | contig542end:10452-10471 | MsG0080048925.01.T02:intergenic | 65.0% |
| !! | GGTGAGTGGTGGTGGGAGAG+AGG | + | contig542end:10455-10474 | MsG0080048925.01.T02:intergenic | 65.0% |
| CGGGGAGGGCGAGAGAAGAG+AGG | + | contig542end:10482-10501 | MsG0080048925.01.T02:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig542end | gene | 10222 | 11684 | 10222 | ID=MsG0080048925.01;Name=MsG0080048925.01 |
| contig542end | mRNA | 10222 | 11684 | 10222 | ID=MsG0080048925.01.T01;Parent=MsG0080048925.01;Name=MsG0080048925.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|0|0|3|0|449 |
| contig542end | exon | 10972 | 11325 | 10972 | ID=MsG0080048925.01.T01:exon:14345;Parent=MsG0080048925.01.T01 |
| contig542end | exon | 10222 | 10938 | 10222 | ID=MsG0080048925.01.T01:exon:14346;Parent=MsG0080048925.01.T01 |
| contig542end | CDS | 11406 | 11684 | 11406 | ID=MsG0080048925.01.T01:cds;Parent=MsG0080048925.01.T01 |
| contig542end | CDS | 10972 | 11325 | 10972 | ID=MsG0080048925.01.T01:cds;Parent=MsG0080048925.01.T01 |
| contig542end | CDS | 10222 | 10938 | 10222 | ID=MsG0080048925.01.T01:cds;Parent=MsG0080048925.01.T01 |
| contig542end | mRNA | 10222 | 11684 | 10222 | ID=MsG0080048925.01.T02;Parent=MsG0080048925.01;Name=MsG0080048925.01.T02;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|0|0.5|2|0|460 |
| contig542end | exon | 10222 | 11325 | 10222 | ID=MsG0080048925.01.T02:exon:14347;Parent=MsG0080048925.01.T02 |
| contig542end | CDS | 11406 | 11684 | 11406 | ID=MsG0080048925.01.T02:cds;Parent=MsG0080048925.01.T02 |
| contig542end | CDS | 10222 | 11325 | 10222 | ID=MsG0080048925.01.T02:cds;Parent=MsG0080048925.01.T02 |
| Gene Sequence |
| Protein sequence |
