Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780035939.01.T01 | XP_013450699.1 | 90.909 | 99 | 7 | 1 | 1 | 97 | 36 | 134 | 2.21E-59 | 188 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780035939.01.T01 | P80680 | 50.617 | 81 | 38 | 2 | 17 | 97 | 17 | 95 | 2.87E-21 | 83.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780035939.01.T01 | I3SXR8 | 90.909 | 99 | 7 | 1 | 1 | 97 | 36 | 134 | 1.05e-59 | 188 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047910.01 | MsG0780035939.01 | 0.808972 | 2.381943e-50 | 1.381145e-47 |
MsG0080048059.01 | MsG0780035939.01 | 0.800728 | 1.258056e-48 | 5.900982e-46 |
MsG0080048273.01 | MsG0780035939.01 | 0.800047 | 1.730676e-48 | 7.978925e-46 |
MsG0080048896.01 | MsG0780035939.01 | 0.814935 | 1.195883e-51 | 8.132214e-49 |
MsG0080048909.01 | MsG0780035939.01 | 0.827106 | 1.878976e-54 | 1.796398e-51 |
MsG0080048929.01 | MsG0780035939.01 | 0.833192 | 6.141406e-56 | 7.020957e-53 |
MsG0080048969.01 | MsG0780035939.01 | 0.802006 | 6.885064e-49 | 3.335677e-46 |
MsG0080049016.01 | MsG0780035939.01 | 0.811751 | 5.987133e-51 | 3.736774e-48 |
MsG0080049062.01 | MsG0780035939.01 | 0.825034 | 5.840629e-54 | 5.263157e-51 |
MsG0180000325.01 | MsG0780035939.01 | 0.834225 | 3.388791e-56 | 3.995763e-53 |
MsG0180000352.01 | MsG0780035939.01 | 0.827869 | 1.232392e-54 | 1.204809e-51 |
MsG0180000541.01 | MsG0780035939.01 | 0.856417 | 3.263135e-62 | 7.783531e-59 |
MsG0180000708.01 | MsG0780035939.01 | 0.804478 | 2.118638e-49 | 1.093496e-46 |
MsG0180001113.01 | MsG0780035939.01 | 0.801650 | 8.148456e-49 | 3.912138e-46 |
MsG0180001249.01 | MsG0780035939.01 | 0.836835 | 7.414049e-57 | 9.455112e-54 |
MsG0180001367.01 | MsG0780035939.01 | 0.804047 | 2.605297e-49 | 1.329893e-46 |
MsG0180001664.01 | MsG0780035939.01 | 0.837232 | 5.868172e-57 | 7.573966e-54 |
MsG0180001827.01 | MsG0780035939.01 | 0.822222 | 2.659250e-53 | 2.212053e-50 |
MsG0180002982.01 | MsG0780035939.01 | 0.827711 | 1.345538e-54 | 1.309302e-51 |
MsG0180003296.01 | MsG0780035939.01 | 0.800193 | 1.616240e-48 | 7.478980e-46 |
MsG0180003350.01 | MsG0780035939.01 | 0.809753 | 1.619024e-50 | 9.586176e-48 |
MsG0180003442.01 | MsG0780035939.01 | 0.846057 | 2.757452e-59 | 4.688086e-56 |
MsG0180003451.01 | MsG0780035939.01 | 0.813216 | 2.863086e-51 | 1.858363e-48 |
MsG0180003933.01 | MsG0780035939.01 | 0.811571 | 6.550469e-51 | 4.068987e-48 |
MsG0180003980.01 | MsG0780035939.01 | 0.812920 | 3.325615e-51 | 2.141405e-48 |
MsG0180004177.01 | MsG0780035939.01 | 0.809547 | 1.793045e-50 | 1.055811e-47 |
MsG0180004193.01 | MsG0780035939.01 | 0.835579 | 1.545904e-56 | 1.898299e-53 |
MsG0180004292.01 | MsG0780035939.01 | 0.832200 | 1.082683e-55 | 1.201575e-52 |
MsG0180004502.01 | MsG0780035939.01 | 0.802228 | 6.198556e-49 | 3.020094e-46 |
MsG0180004504.01 | MsG0780035939.01 | 0.814059 | 1.868592e-51 | 1.240966e-48 |
MsG0180004865.01 | MsG0780035939.01 | 0.838239 | 3.235748e-57 | 4.307207e-54 |
MsG0180005283.01 | MsG0780035939.01 | 0.839384 | 1.636352e-57 | 2.256195e-54 |
MsG0180005561.01 | MsG0780035939.01 | 0.800710 | 1.268522e-48 | 5.947240e-46 |
MsG0180005879.01 | MsG0780035939.01 | 0.804306 | 2.301521e-49 | 1.182651e-46 |
MsG0180006042.01 | MsG0780035939.01 | 0.806139 | 9.510972e-50 | 5.123131e-47 |
MsG0180006159.01 | MsG0780035939.01 | 0.825495 | 4.544058e-54 | 4.148488e-51 |
MsG0180006223.01 | MsG0780035939.01 | 0.821007 | 5.075779e-53 | 4.080711e-50 |
MsG0280006451.01 | MsG0780035939.01 | 0.813469 | 2.519640e-51 | 1.646890e-48 |
MsG0280006452.01 | MsG0780035939.01 | 0.806601 | 7.600452e-50 | 4.142472e-47 |
MsG0280010661.01 | MsG0780035939.01 | 0.804858 | 1.765304e-49 | 9.201774e-47 |
MsG0280011197.01 | MsG0780035939.01 | 0.808743 | 2.666264e-50 | 1.536598e-47 |
MsG0280011276.01 | MsG0780035939.01 | 0.809564 | 1.778268e-50 | 1.047585e-47 |
MsG0280011279.01 | MsG0780035939.01 | 0.802982 | 4.331520e-49 | 2.151320e-46 |
MsG0280011449.01 | MsG0780035939.01 | 0.813933 | 1.991123e-51 | 1.317818e-48 |
MsG0380011739.01 | MsG0780035939.01 | 0.855048 | 8.194949e-62 | 1.867465e-58 |
MsG0380012251.01 | MsG0780035939.01 | 0.829902 | 3.970144e-55 | 4.119015e-52 |
MsG0380012782.01 | MsG0780035939.01 | 0.803834 | 2.885743e-49 | 1.465005e-46 |
MsG0380013111.01 | MsG0780035939.01 | 0.801233 | 9.919669e-49 | 4.712922e-46 |
MsG0380013501.01 | MsG0780035939.01 | 0.815444 | 9.213895e-52 | 6.353836e-49 |
MsG0380014729.01 | MsG0780035939.01 | 0.828889 | 6.992354e-55 | 7.041350e-52 |
MsG0380014795.01 | MsG0780035939.01 | 0.817522 | 3.157126e-52 | 2.304493e-49 |
MsG0680030875.01 | MsG0780035939.01 | 0.803272 | 3.773575e-49 | 1.888211e-46 |
MsG0680030878.01 | MsG0780035939.01 | 0.820200 | 7.776977e-53 | 6.113294e-50 |
MsG0680032055.01 | MsG0780035939.01 | 0.829301 | 5.556407e-55 | 5.665262e-52 |
MsG0680032160.01 | MsG0780035939.01 | 0.811287 | 7.551195e-51 | 4.655434e-48 |
MsG0680033901.01 | MsG0780035939.01 | 0.811579 | 6.524301e-51 | 4.053554e-48 |
MsG0680033902.01 | MsG0780035939.01 | 0.812465 | 4.182326e-51 | 2.661289e-48 |
MsG0480018658.01 | MsG0780035939.01 | 0.827274 | 1.712724e-54 | 1.645648e-51 |
MsG0480018983.01 | MsG0780035939.01 | 0.830749 | 2.465171e-55 | 2.621090e-52 |
MsG0480019376.01 | MsG0780035939.01 | 0.818862 | 1.570298e-52 | 1.189368e-49 |
MsG0480019485.01 | MsG0780035939.01 | 0.816239 | 6.127540e-52 | 4.318336e-49 |
MsG0480019592.01 | MsG0780035939.01 | 0.815861 | 7.440754e-52 | 5.189730e-49 |
MsG0480019693.01 | MsG0780035939.01 | 0.834769 | 2.474286e-56 | 2.965254e-53 |
MsG0480019974.01 | MsG0780035939.01 | 0.827674 | 1.372999e-54 | 1.334559e-51 |
MsG0480020122.01 | MsG0780035939.01 | 0.817438 | 3.297448e-52 | 2.401453e-49 |
MsG0480020496.01 | MsG0780035939.01 | 0.801392 | 9.200129e-49 | 4.388501e-46 |
MsG0480020533.01 | MsG0780035939.01 | 0.802441 | 5.601832e-49 | 2.744289e-46 |
MsG0480021039.01 | MsG0780035939.01 | 0.828912 | 6.903884e-55 | 6.957083e-52 |
MsG0480021143.01 | MsG0780035939.01 | 0.835293 | 1.825206e-56 | 2.222638e-53 |
MsG0480021307.01 | MsG0780035939.01 | 0.812755 | 3.614237e-51 | 2.317207e-48 |
MsG0480021308.01 | MsG0780035939.01 | 0.801439 | 8.998155e-49 | 4.297345e-46 |
MsG0480021367.01 | MsG0780035939.01 | 0.824644 | 7.219816e-54 | 6.433790e-51 |
MsG0480021420.01 | MsG0780035939.01 | 0.809271 | 2.054864e-50 | 1.201126e-47 |
MsG0480021795.01 | MsG0780035939.01 | 0.830608 | 2.668018e-55 | 2.825049e-52 |
MsG0480022297.01 | MsG0780035939.01 | 0.810719 | 1.002019e-50 | 6.085814e-48 |
MsG0480022584.01 | MsG0780035939.01 | 0.815785 | 7.736081e-52 | 5.385055e-49 |
MsG0480022626.01 | MsG0780035939.01 | 0.821399 | 4.121933e-53 | 3.349803e-50 |
MsG0480023104.01 | MsG0780035939.01 | 0.800061 | 1.719490e-48 | 7.930253e-46 |
MsG0480023166.01 | MsG0780035939.01 | 0.803726 | 3.037532e-49 | 1.537778e-46 |
MsG0480023371.01 | MsG0780035939.01 | 0.808316 | 3.287870e-50 | 1.873988e-47 |
MsG0480023376.01 | MsG0780035939.01 | 0.814278 | 1.671479e-51 | 1.116697e-48 |
MsG0480023422.01 | MsG0780035939.01 | 0.836192 | 1.080849e-56 | 1.352294e-53 |
MsG0480023705.01 | MsG0780035939.01 | 0.800796 | 1.218481e-48 | 5.725151e-46 |
MsG0480023708.01 | MsG0780035939.01 | 0.800163 | 1.639285e-48 | 7.579585e-46 |
MsG0480023850.01 | MsG0780035939.01 | 0.802162 | 6.393923e-49 | 3.110146e-46 |
MsG0480023881.01 | MsG0780035939.01 | 0.830997 | 2.142635e-55 | 2.294916e-52 |
MsG0480023993.01 | MsG0780035939.01 | 0.814260 | 1.686967e-51 | 1.126492e-48 |
MsG0580024128.01 | MsG0780035939.01 | 0.807917 | 3.998931e-50 | 2.255230e-47 |
MsG0580024371.01 | MsG0780035939.01 | 0.823651 | 1.234809e-53 | 1.069755e-50 |
MsG0580024875.01 | MsG0780035939.01 | 0.823423 | 1.396593e-53 | 1.201908e-50 |
MsG0580024950.01 | MsG0780035939.01 | 0.801751 | 7.767299e-49 | 3.738695e-46 |
MsG0580024982.01 | MsG0780035939.01 | 0.811708 | 6.115312e-51 | 3.812372e-48 |
MsG0580025259.01 | MsG0780035939.01 | 0.817539 | 3.129830e-52 | 2.285632e-49 |
MsG0580025294.01 | MsG0780035939.01 | 0.803109 | 4.077185e-49 | 2.031595e-46 |
MsG0580025373.01 | MsG0780035939.01 | 0.844008 | 9.861109e-59 | 1.570817e-55 |
MsG0580025392.01 | MsG0780035939.01 | 0.805679 | 1.188301e-49 | 6.325988e-47 |
MsG0580025513.01 | MsG0780035939.01 | 0.848783 | 4.918586e-60 | 9.128308e-57 |
MsG0580025589.01 | MsG0780035939.01 | 0.859071 | 5.329886e-63 | 1.389757e-59 |
MsG0380015077.01 | MsG0780035939.01 | 0.833238 | 5.983009e-56 | 6.848893e-53 |
MsG0380015103.01 | MsG0780035939.01 | 0.801542 | 8.570922e-49 | 4.103954e-46 |
MsG0380015501.01 | MsG0780035939.01 | 0.800159 | 1.642189e-48 | 7.592286e-46 |
MsG0380015900.01 | MsG0780035939.01 | 0.825470 | 4.605504e-54 | 4.201487e-51 |
MsG0380016042.01 | MsG0780035939.01 | 0.813344 | 2.684409e-51 | 1.748586e-48 |
MsG0380016231.01 | MsG0780035939.01 | 0.808916 | 2.448162e-50 | 1.417414e-47 |
MsG0380016354.01 | MsG0780035939.01 | 0.803468 | 3.435964e-49 | 1.727979e-46 |
MsG0380016452.01 | MsG0780035939.01 | 0.828427 | 9.043124e-55 | 8.986186e-52 |
MsG0380016459.01 | MsG0780035939.01 | 0.811707 | 6.119842e-51 | 3.815088e-48 |
MsG0380016530.01 | MsG0780035939.01 | 0.829196 | 5.894059e-55 | 5.990240e-52 |
MsG0380016578.01 | MsG0780035939.01 | 0.815593 | 8.540068e-52 | 5.913101e-49 |
MsG0380016580.01 | MsG0780035939.01 | 0.802048 | 6.749752e-49 | 3.273658e-46 |
MsG0380017074.01 | MsG0780035939.01 | 0.837747 | 4.330765e-57 | 5.680070e-54 |
MsG0380017309.01 | MsG0780035939.01 | 0.809762 | 1.611780e-50 | 9.545623e-48 |
MsG0380017402.01 | MsG0780035939.01 | 0.814980 | 1.168360e-51 | 7.955049e-49 |
MsG0380017472.01 | MsG0780035939.01 | 0.800672 | 1.291239e-48 | 6.048289e-46 |
MsG0380017474.01 | MsG0780035939.01 | 0.801563 | 8.489809e-49 | 4.067161e-46 |
MsG0380017647.01 | MsG0780035939.01 | 0.803175 | 3.952094e-49 | 1.972669e-46 |
MsG0380017762.01 | MsG0780035939.01 | 0.835220 | 1.904602e-56 | 2.314037e-53 |
MsG0380017774.01 | MsG0780035939.01 | 0.804907 | 1.724550e-49 | 9.001028e-47 |
MsG0380017976.01 | MsG0780035939.01 | 0.820512 | 6.597307e-53 | 5.230545e-50 |
MsG0480018089.01 | MsG0780035939.01 | 0.807618 | 4.628755e-50 | 2.590197e-47 |
MsG0480018098.01 | MsG0780035939.01 | 0.825488 | 4.562321e-54 | 4.164283e-51 |
MsG0480018100.01 | MsG0780035939.01 | 0.824636 | 7.249383e-54 | 6.458818e-51 |
MsG0480018101.01 | MsG0780035939.01 | 0.831416 | 1.689901e-55 | 1.832604e-52 |
MsG0480018108.01 | MsG0780035939.01 | 0.826570 | 2.523746e-54 | 2.375628e-51 |
MsG0480018190.01 | MsG0780035939.01 | 0.811987 | 5.317582e-51 | 3.339953e-48 |
MsG0480018196.01 | MsG0780035939.01 | 0.824153 | 9.420204e-54 | 8.276497e-51 |
MsG0480018323.01 | MsG0780035939.01 | 0.843362 | 1.468361e-58 | 2.292046e-55 |
MsG0480018328.01 | MsG0780035939.01 | 0.805692 | 1.180560e-49 | 6.287085e-47 |
MsG0580026211.01 | MsG0780035939.01 | 0.825030 | 5.853535e-54 | 5.274241e-51 |
MsG0580027095.01 | MsG0780035939.01 | 0.814031 | 1.895080e-51 | 1.257631e-48 |
MsG0580028093.01 | MsG0780035939.01 | 0.804360 | 2.242766e-49 | 1.154067e-46 |
MsG0580028461.01 | MsG0780035939.01 | 0.814833 | 1.259528e-51 | 8.541704e-49 |
MsG0580029719.01 | MsG0780035939.01 | 0.803862 | 2.846278e-49 | 1.446059e-46 |
MsG0580029820.01 | MsG0780035939.01 | 0.830337 | 3.108720e-55 | 3.265809e-52 |
MsG0680030290.01 | MsG0780035939.01 | 0.823955 | 1.048118e-53 | 9.157884e-51 |
MsG0680030441.01 | MsG0780035939.01 | 0.815909 | 7.260898e-52 | 5.070725e-49 |
MsG0280006706.01 | MsG0780035939.01 | 0.821183 | 4.623392e-53 | 3.734954e-50 |
MsG0280006964.01 | MsG0780035939.01 | 0.822545 | 2.237245e-53 | 1.878407e-50 |
MsG0280006989.01 | MsG0780035939.01 | 0.805266 | 1.450096e-49 | 7.637711e-47 |
MsG0280007017.01 | MsG0780035939.01 | 0.801540 | 8.581157e-49 | 4.108568e-46 |
MsG0280007079.01 | MsG0780035939.01 | 0.803989 | 2.679264e-49 | 1.365657e-46 |
MsG0280007102.01 | MsG0780035939.01 | 0.810372 | 1.191183e-50 | 7.167585e-48 |
MsG0280007247.01 | MsG0780035939.01 | 0.801704 | 7.942624e-49 | 3.818548e-46 |
MsG0280007600.01 | MsG0780035939.01 | 0.825921 | 3.601682e-54 | 3.328461e-51 |
MsG0280007702.01 | MsG0780035939.01 | 0.832266 | 1.042524e-55 | 1.159176e-52 |
MsG0280007703.01 | MsG0780035939.01 | 0.827457 | 1.547951e-54 | 1.495329e-51 |
MsG0280008227.01 | MsG0780035939.01 | 0.814843 | 1.253040e-51 | 8.500175e-49 |
MsG0280008233.01 | MsG0780035939.01 | 0.802129 | 6.495189e-49 | 3.156680e-46 |
MsG0280008430.01 | MsG0780035939.01 | 0.809137 | 2.195323e-50 | 1.278679e-47 |
MsG0280008935.01 | MsG0780035939.01 | 0.815959 | 7.074407e-52 | 4.947618e-49 |
MsG0280009094.01 | MsG0780035939.01 | 0.801143 | 1.034535e-48 | 4.904132e-46 |
MsG0280009431.01 | MsG0780035939.01 | 0.806288 | 8.845214e-50 | 4.782752e-47 |
MsG0280009434.01 | MsG0780035939.01 | 0.825044 | 5.808240e-54 | 5.235538e-51 |
MsG0280009751.01 | MsG0780035939.01 | 0.819327 | 1.230933e-52 | 9.442611e-50 |
MsG0280009776.01 | MsG0780035939.01 | 0.813458 | 2.534140e-51 | 1.655905e-48 |
MsG0280009956.01 | MsG0780035939.01 | 0.814440 | 1.538880e-51 | 1.032658e-48 |
MsG0280010281.01 | MsG0780035939.01 | 0.828812 | 7.302680e-55 | 7.337461e-52 |
MsG0280010461.01 | MsG0780035939.01 | 0.807444 | 5.039102e-50 | 2.807153e-47 |
MsG0780035939.01 | MsG0780036067.01 | 0.827417 | 1.583029e-54 | 1.527423e-51 |
MsG0780035939.01 | MsG0780036881.01 | 0.825898 | 3.645924e-54 | 3.367297e-51 |
MsG0780035939.01 | MsG0780036909.01 | 0.831671 | 1.462337e-55 | 1.597975e-52 |
MsG0780035939.01 | MsG0780037638.01 | 0.804337 | 2.267023e-49 | 1.165854e-46 |
MsG0780035939.01 | MsG0780037655.01 | 0.827095 | 1.890308e-54 | 1.806699e-51 |
MsG0780035939.01 | MsG0780038106.01 | 0.832721 | 8.041384e-56 | 9.064604e-53 |
MsG0780035939.01 | MsG0780038756.01 | 0.828992 | 6.603710e-55 | 6.670069e-52 |
MsG0780035939.01 | MsG0780038839.01 | 0.809753 | 1.618789e-50 | 9.584853e-48 |
MsG0780035939.01 | MsG0780038986.01 | 0.812551 | 4.006044e-51 | 2.554759e-48 |
MsG0780035939.01 | MsG0780039449.01 | 0.851437 | 8.882019e-61 | 1.797780e-57 |
MsG0780035939.01 | MsG0780039596.01 | 0.808918 | 2.445242e-50 | 1.415801e-47 |
MsG0780035939.01 | MsG0780039859.01 | 0.810369 | 1.192997e-50 | 7.178024e-48 |
MsG0780035939.01 | MsG0780040080.01 | 0.800598 | 1.337081e-48 | 6.251109e-46 |
MsG0780035939.01 | MsG0780040159.01 | 0.809722 | 1.643795e-50 | 9.724814e-48 |
MsG0780035939.01 | MsG0780040319.01 | 0.807141 | 5.842906e-50 | 3.229303e-47 |
MsG0780035939.01 | MsG0780040429.01 | 0.803223 | 3.862975e-49 | 1.930522e-46 |
MsG0780035939.01 | MsG0780040644.01 | 0.810926 | 9.040170e-51 | 5.521124e-48 |
MsG0780035939.01 | MsG0780040884.01 | 0.814785 | 1.290672e-51 | 8.741624e-49 |
MsG0780035939.01 | MsG0780041035.01 | 0.857470 | 1.597033e-62 | 3.945974e-59 |
MsG0780035939.01 | MsG0780041289.01 | 0.820730 | 5.876669e-53 | 4.687635e-50 |
MsG0780035939.01 | MsG0780041478.01 | 0.806757 | 7.045912e-50 | 3.855597e-47 |
MsG0780035939.01 | MsG0780041492.01 | 0.809876 | 1.523777e-50 | 9.050836e-48 |
MsG0780035939.01 | MsG0780041792.01 | 0.806268 | 8.933476e-50 | 4.828099e-47 |
MsG0780035939.01 | MsG0880042021.01 | 0.805824 | 1.107907e-49 | 5.919923e-47 |
MsG0780035939.01 | MsG0880042043.01 | 0.844165 | 8.952773e-59 | 1.433028e-55 |
MsG0780035939.01 | MsG0880042889.01 | 0.820780 | 5.724376e-53 | 4.572554e-50 |
MsG0780035939.01 | MsG0880042895.01 | 0.832025 | 1.195796e-55 | 1.320429e-52 |
MsG0780035939.01 | MsG0880042921.01 | 0.831395 | 1.710112e-55 | 1.853425e-52 |
MsG0780035939.01 | MsG0880043032.01 | 0.823509 | 1.333226e-53 | 1.150270e-50 |
MsG0780035939.01 | MsG0880043069.01 | 0.812761 | 3.602724e-51 | 2.310203e-48 |
MsG0780035939.01 | MsG0880043075.01 | 0.810204 | 1.294534e-50 | 7.755200e-48 |
MsG0780035939.01 | MsG0880044636.01 | 0.850228 | 1.944823e-60 | 3.783696e-57 |
MsG0780035939.01 | MsG0880044720.01 | 0.811281 | 7.571861e-51 | 4.667451e-48 |
MsG0780035939.01 | MsG0880045063.01 | 0.828007 | 1.142135e-54 | 1.121118e-51 |
MsG0780035939.01 | MsG0880045073.01 | 0.842824 | 2.041644e-58 | 3.133014e-55 |
MsG0780035939.01 | MsG0880045261.01 | 0.830358 | 3.071487e-55 | 3.228730e-52 |
MsG0780035939.01 | MsG0880045283.01 | 0.819188 | 1.323962e-52 | 1.011756e-49 |
MsG0780035939.01 | MsG0880045412.01 | 0.816875 | 4.413809e-52 | 3.165337e-49 |
MsG0780035939.01 | MsG0880045778.01 | 0.832293 | 1.026802e-55 | 1.142590e-52 |
MsG0780035939.01 | MsG0880046051.01 | 0.818791 | 1.630014e-52 | 1.232069e-49 |
MsG0780035939.01 | MsG0880046288.01 | 0.828450 | 8.931917e-55 | 8.881509e-52 |
MsG0780035939.01 | MsG0880046584.01 | 0.809803 | 1.579929e-50 | 9.366691e-48 |
MsG0780035939.01 | MsG0880046639.01 | 0.805777 | 1.133168e-49 | 6.047795e-47 |
MsG0780035939.01 | MsG0880046866.01 | 0.804833 | 1.786384e-49 | 9.305715e-47 |
MsG0780035939.01 | MsG0880047669.01 | 0.811035 | 8.560967e-51 | 5.243538e-48 |
MsG0780035939.01 | MsG0880047723.01 | 0.812349 | 4.432637e-51 | 2.811760e-48 |
MsG0780035939.01 | MsG0880047727.01 | 0.812605 | 3.897111e-51 | 2.488752e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780035939.01.T01 | MTR_6g004100 | 90.909 | 99 | 7 | 1 | 1 | 97 | 36 | 134 | 2.67e-63 | 188 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780035939.01.T01 | AT5G08410 | 60.227 | 88 | 32 | 3 | 10 | 97 | 98 | 182 | 1.95e-28 | 101 |
MsG0780035939.01.T01 | AT5G08410 | 60.227 | 88 | 32 | 3 | 10 | 97 | 118 | 202 | 3.01e-28 | 101 |
MsG0780035939.01.T01 | AT5G23440 | 62.963 | 81 | 27 | 3 | 19 | 99 | 105 | 182 | 8.27e-28 | 100 |
Find 20 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAACAGAACGTGACTTTC+TGG | 0.222174 | 7:+352992 | MsG0780035939.01.T01:CDS |
CGAAGATTGGAGCGCGTGTT+AGG | 0.325158 | 7:+352896 | MsG0780035939.01.T01:CDS |
GCAACAAATTCAAACTTATA+AGG | 0.346872 | 7:-353045 | None:intergenic |
GAGATTAACTTCAGGAACTT+TGG | 0.356776 | 7:-352950 | None:intergenic |
AGATTAACTTCAGGAACTTT+GGG | 0.370050 | 7:-352949 | None:intergenic |
TGGAGCGCGTGTTAGGGTTA+AGG | 0.393600 | 7:+352903 | MsG0780035939.01.T01:CDS |
GATTCATCAACTGCGAAGAT+TGG | 0.433656 | 7:+352883 | MsG0780035939.01.T01:CDS |
CTTCAGGAACTTTGGGAACA+TGG | 0.469999 | 7:-352942 | None:intergenic |
GAAGATTGGAGCGCGTGTTA+GGG | 0.483952 | 7:+352897 | MsG0780035939.01.T01:CDS |
TTTGTTGCTGATGATATTCA+AGG | 0.490454 | 7:+353060 | MsG0780035939.01.T01:CDS |
GTTCCTGAAGTTAATCTCAC+TGG | 0.520219 | 7:+352955 | MsG0780035939.01.T01:CDS |
GAAGAAGAATGATTCAGATA+AGG | 0.523801 | 7:+352842 | None:intergenic |
CTACCAGTGAGATTAACTTC+AGG | 0.525807 | 7:-352958 | None:intergenic |
GGAACATGGTAGACTTTGAG+AGG | 0.538879 | 7:-352928 | None:intergenic |
GTTAATCTCACTGGTAGAGA+AGG | 0.541716 | 7:+352964 | MsG0780035939.01.T01:CDS |
ATTCAGATAAGGTGTGATGT+TGG | 0.562003 | 7:+352853 | MsG0780035939.01.T01:CDS |
AGATGAGCAACAAACTTGAG+AGG | 0.590824 | 7:-353093 | None:intergenic |
TTAATCTCACTGGTAGAGAA+GGG | 0.619049 | 7:+352965 | MsG0780035939.01.T01:CDS |
GATGATATTCAAGGTCCTCG+TGG | 0.683280 | 7:+353069 | MsG0780035939.01.T01:CDS |
ACAAACTTGAGAGGACCACG+AGG | 0.762532 | 7:-353084 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | GCAACAAATTCAAACTTATA+AGG | - | Chr7:353048-353067 | None:intergenic | 25.0% |
AGATTAACTTCAGGAACTTT+GGG | - | Chr7:352952-352971 | None:intergenic | 30.0% | |
TTTGTTGCTGATGATATTCA+AGG | + | Chr7:353060-353079 | MsG0780035939.01.T01:CDS | 30.0% | |
ATTCAGATAAGGTGTGATGT+TGG | + | Chr7:352853-352872 | MsG0780035939.01.T01:CDS | 35.0% | |
GAGATTAACTTCAGGAACTT+TGG | - | Chr7:352953-352972 | None:intergenic | 35.0% | |
TTAATCTCACTGGTAGAGAA+GGG | + | Chr7:352965-352984 | MsG0780035939.01.T01:CDS | 35.0% | |
AGATGAGCAACAAACTTGAG+AGG | - | Chr7:353096-353115 | None:intergenic | 40.0% | |
CTACCAGTGAGATTAACTTC+AGG | - | Chr7:352961-352980 | None:intergenic | 40.0% | |
GATTCATCAACTGCGAAGAT+TGG | + | Chr7:352883-352902 | MsG0780035939.01.T01:CDS | 40.0% | |
GTTAATCTCACTGGTAGAGA+AGG | + | Chr7:352964-352983 | MsG0780035939.01.T01:CDS | 40.0% | |
GTTCCTGAAGTTAATCTCAC+TGG | + | Chr7:352955-352974 | MsG0780035939.01.T01:CDS | 40.0% | |
TCAAACAGAACGTGACTTTC+TGG | + | Chr7:352992-353011 | MsG0780035939.01.T01:CDS | 40.0% | |
GATGATATTCAAGGTCCTCG+TGG | + | Chr7:353069-353088 | MsG0780035939.01.T01:CDS | 45.0% | |
GGAACATGGTAGACTTTGAG+AGG | - | Chr7:352931-352950 | None:intergenic | 45.0% | |
! | CTTCAGGAACTTTGGGAACA+TGG | - | Chr7:352945-352964 | None:intergenic | 45.0% |
ACAAACTTGAGAGGACCACG+AGG | - | Chr7:353087-353106 | None:intergenic | 50.0% | |
GAAGATTGGAGCGCGTGTTA+GGG | + | Chr7:352897-352916 | MsG0780035939.01.T01:CDS | 50.0% | |
CGAAGATTGGAGCGCGTGTT+AGG | + | Chr7:352896-352915 | MsG0780035939.01.T01:CDS | 55.0% | |
TGGAGCGCGTGTTAGGGTTA+AGG | + | Chr7:352903-352922 | MsG0780035939.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 352850 | 353149 | 352850 | ID=MsG0780035939.01;Name=MsG0780035939.01 |
Chr7 | mRNA | 352850 | 353149 | 352850 | ID=MsG0780035939.01.T01;Parent=MsG0780035939.01;Name=MsG0780035939.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|99 |
Chr7 | exon | 352850 | 353149 | 352850 | ID=MsG0780035939.01.T01:exon:38222;Parent=MsG0780035939.01.T01 |
Chr7 | CDS | 352850 | 353149 | 352850 | ID=MsG0780035939.01.T01:cds;Parent=MsG0780035939.01.T01 |
Gene Sequence |
Protein sequence |