AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044720.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044720.01.T01 MTR_8g055860 94.705 491 12 2 1 477 1 491 0.0 949
MsG0880044720.01.T01 MTR_5g040340 47.791 498 184 21 17 477 7 465 5.97e-110 333
MsG0880044720.01.T01 MTR_7g088200 28.528 326 193 9 112 409 129 442 6.57e-16 80.5
MsG0880044720.01.T02 MTR_8g055860 92.057 491 11 2 1 463 1 491 0.0 918
MsG0880044720.01.T02 MTR_5g040340 48.676 491 176 21 17 463 7 465 5.71e-112 338
MsG0880044720.01.T02 MTR_7g088200 27.381 336 170 11 112 395 129 442 4.70e-14 74.7
MsG0880044720.01.T03 MTR_8g055860 96.945 491 13 1 1 489 1 491 0.0 980
MsG0880044720.01.T03 MTR_5g040340 47.451 510 180 22 17 489 7 465 4.70e-110 334
MsG0880044720.01.T03 MTR_7g088200 28.358 335 194 10 112 421 129 442 1.54e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044720.01.T01 AT2G02950 35.583 489 193 24 1 445 1 411 5.22e-51 179
MsG0880044720.01.T01 AT1G14280 33.021 427 148 21 75 446 74 417 7.68e-36 138
MsG0880044720.01.T02 AT2G02950 37.474 475 189 24 1 431 1 411 1.64e-53 186
MsG0880044720.01.T02 AT1G14280 34.307 411 150 21 75 432 74 417 3.22e-39 147
MsG0880044720.01.T03 AT2G02950 35.529 501 189 24 1 457 1 411 1.00e-49 176
MsG0880044720.01.T03 AT1G14280 32.723 437 148 22 75 458 74 417 7.32e-35 135

Find 80 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAAAGCTGTTAGAGTTTC+TGG 0.087161 8:+48312148 MsG0880044720.01.T03:CDS
GCAGAAGAAATTGGAGTATT+TGG 0.123215 8:+48311119 MsG0880044720.01.T03:CDS
GGTTTCAATGGTGTCCTTAT+TGG 0.178083 8:-48312067 None:intergenic
AGAAAATCACTTGAAGTATT+TGG 0.207408 8:+48311707 MsG0880044720.01.T03:CDS
AATAACAAAACTTCTAAGTA+TGG 0.262272 8:+48311452 MsG0880044720.01.T03:CDS
ATTCATTGACCAATGATAAA+AGG 0.266711 8:+48311765 MsG0880044720.01.T03:CDS
AGAGTTTCTATGATTGATAA+AGG 0.308728 8:-48311075 None:intergenic
AAGCAATGAAAATAATAGTT+TGG 0.313990 8:+48311622 MsG0880044720.01.T03:CDS
TTTCCAGGAGAGACAAATTA+TGG 0.316379 8:+48312259 MsG0880044720.01.T03:CDS
CACTCTTTAAGAGTGCATTT+TGG 0.316916 8:-48311295 None:intergenic
TTCAAAAGCAAGAGAAGTTA+AGG 0.319574 8:+48311591 MsG0880044720.01.T03:CDS
TCTCAAGTGGCAAGGTTTCC+AGG 0.321527 8:+48312244 MsG0880044720.01.T03:CDS
CCTTCTTTGATATTCAAGTA+TGG 0.329280 8:-48311008 None:intergenic
TTGTTTCTCATAAGTTATAA+AGG 0.342594 8:-48312176 None:intergenic
TGATAAAGGGATTGATTGTT+TGG 0.342900 8:-48311061 None:intergenic
GTGGAAAAGGCAGAAGAAAT+TGG 0.345679 8:+48311110 MsG0880044720.01.T03:CDS
GGTGTCTCCTTAGCGACTTT+TGG 0.350009 8:-48312088 None:intergenic
TCACTCGGCGCATAACAATT+CGG 0.363432 8:-48311956 None:intergenic
AGAAAGTACCAAGTTGAGTA+TGG 0.364459 8:+48311236 MsG0880044720.01.T03:CDS
TTATTGATCAATATTGGATT+TGG 0.374889 8:-48311734 None:intergenic
AGTGGAGTGAGAAATTCTAT+AGG 0.378295 8:+48311314 MsG0880044720.01.T03:CDS
TGAAGCATGTGGCGAGTTAG+AGG 0.378519 8:-48312332 None:intergenic
AAATGTTTGAGTTTACAATA+AGG 0.381327 8:+48312041 MsG0880044720.01.T03:CDS
CATTTGATGAAGGTTGGTTT+TGG 0.386793 8:-48310925 None:intergenic
CGGCGGCCTGGCATGTTGTT+GGG 0.387012 8:+48312115 MsG0880044720.01.T03:CDS
AGACAAATTATGGTTCAAAA+AGG 0.388140 8:+48312269 MsG0880044720.01.T03:CDS
GCGGCGGCCTGGCATGTTGT+TGG 0.388150 8:+48312114 MsG0880044720.01.T03:CDS
TTACAATAAGGAGTCCAATA+AGG 0.397883 8:+48312053 MsG0880044720.01.T03:CDS
CACTCGGCGCATAACAATTC+GGG 0.399242 8:-48311955 None:intergenic
TCTAAGTATGGTGCAGTTCA+AGG 0.411902 8:+48311464 MsG0880044720.01.T03:CDS
GAACCATAATTTGTCTCTCC+TGG 0.414611 8:-48312262 None:intergenic
GTGGAGTGAGAAATTCTATA+GGG 0.424894 8:+48311315 MsG0880044720.01.T03:CDS
TCCTCTTCATCAAGTGGAAA+AGG 0.431734 8:+48311097 MsG0880044720.01.T03:CDS
GAGTTTCTATGATTGATAAA+GGG 0.434242 8:-48311074 None:intergenic
TTATACCACACCACCATTGC+AGG 0.447302 8:+48312309 MsG0880044720.01.T03:CDS
GAGACACCGAGGCGGCGGCC+TGG 0.448368 8:+48312103 MsG0880044720.01.T03:CDS
AGGTACTTTGTAGAAGGTCT+TGG 0.451368 8:-48311179 None:intergenic
TCAAAAGCAAGAGAAGTTAA+GGG 0.452923 8:+48311592 MsG0880044720.01.T03:CDS
TCTAGTAAGAAAATTGTTGT+TGG 0.460554 8:-48311900 None:intergenic
AACATGCCAGGCCGCCGCCT+CGG 0.461235 8:-48312109 None:intergenic
CAGAAACTCTAACAGCTTTG+TGG 0.461380 8:-48312147 None:intergenic
TTGTTTCCTTTCTCTGAGGA+AGG 0.475302 8:-48311199 None:intergenic
AGTAAGAAAATTGTTGTTGG+AGG 0.489605 8:-48311897 None:intergenic
TAAAACTGATTTCACTTGCA+TGG 0.493162 8:-48311430 None:intergenic
TGAAAGTTTGCATTTGATGA+AGG 0.498109 8:-48310935 None:intergenic
CATTCTATGCTTGCCTCACT+CGG 0.500118 8:-48311971 None:intergenic
GCGCATAACAATTCGGGCTA+AGG 0.501346 8:-48311949 None:intergenic
GTAAGAAAATTGTTGTTGGA+GGG 0.511679 8:-48311896 None:intergenic
AAAGTACCTTCCTCAGAGAA+AGG 0.512613 8:+48311193 MsG0880044720.01.T03:CDS
TTGAGTAAGATTTCTGAGCT+AGG 0.514673 8:-48311554 None:intergenic
AGTTTGCATTTGATGAAGGT+TGG 0.517268 8:-48310931 None:intergenic
TTGCATCCCAACAACATGCC+AGG 0.520880 8:-48312121 None:intergenic
TGAGGAAGGTACTTTGTAGA+AGG 0.524612 8:-48311185 None:intergenic
CCATACTTGAATATCAAAGA+AGG 0.535861 8:+48311008 MsG0880044720.01.T03:CDS
AAACTCTCCTCTTCATCAAG+TGG 0.540685 8:+48311091 MsG0880044720.01.T03:CDS
TTTGAGATTGAGAGTCTCAA+AGG 0.541185 8:+48311869 MsG0880044720.01.T03:CDS
CTAAGGAGACACCGAGGCGG+CGG 0.545196 8:+48312098 MsG0880044720.01.T03:CDS
CGAGTGAGGCAAGCATAGAA+TGG 0.547758 8:+48311972 MsG0880044720.01.T03:CDS
GTTGACACAGAACTAATACT+TGG 0.553240 8:-48311263 None:intergenic
AGAAAACAGCATCATGGAGG+TGG 0.557647 8:-48310983 None:intergenic
TTGGAGTTCCATACTCAACT+TGG 0.566689 8:-48311244 None:intergenic
ATGGAGAGAAAACAGCATCA+TGG 0.576053 8:-48310989 None:intergenic
AAACAATACTAATTCTCAAG+TGG 0.581231 8:+48312231 MsG0880044720.01.T03:CDS
ATACTAATTCTCAAGTGGCA+AGG 0.582567 8:+48312236 MsG0880044720.01.T03:CDS
AAGCAAGAGAAGTTAAGGGT+AGG 0.593464 8:+48311596 MsG0880044720.01.T03:CDS
ATTGAAACCAAAAGTCGCTA+AGG 0.601572 8:+48312081 MsG0880044720.01.T03:CDS
TATAGTAACTTTGAAGCATG+TGG 0.603295 8:-48312343 None:intergenic
GAGTTAGAGGCCTGCAATGG+TGG 0.606643 8:-48312319 None:intergenic
TCCTCAGAGAAAGGAAACAA+TGG 0.613500 8:+48311202 MsG0880044720.01.T03:CDS
AAAAGGCATGGACAACAACA+TGG 0.618653 8:+48312286 MsG0880044720.01.T03:CDS
CAAAATGCACTCTTAAAGAG+TGG 0.623280 8:+48311296 MsG0880044720.01.T03:CDS
GAATTGTTATGCGCCGAGTG+AGG 0.631139 8:+48311958 MsG0880044720.01.T03:CDS
GCCATTGTTTCCTTTCTCTG+AGG 0.638901 8:-48311203 None:intergenic
GTATTAGTTCTGTGTCAACA+TGG 0.647005 8:+48311267 MsG0880044720.01.T03:CDS
AGAGGCCTGCAATGGTGGTG+TGG 0.651196 8:-48312314 None:intergenic
GGCGAGTTAGAGGCCTGCAA+TGG 0.698179 8:-48312322 None:intergenic
GGCAAGCATAGAATGGAGTG+TGG 0.714785 8:+48311979 MsG0880044720.01.T03:CDS
GAGAGAAAACAGCATCATGG+AGG 0.723218 8:-48310986 None:intergenic
TCGCTAAGGAGACACCGAGG+CGG 0.748620 8:+48312095 MsG0880044720.01.T03:CDS
AAGTCGCTAAGGAGACACCG+AGG 0.807856 8:+48312092 MsG0880044720.01.T03:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATCAATTTCTTTCATTTT+TGG - Chr8:48311800-48311819 None:intergenic 15.0%
!! AAGCAATGAAAATAATAGTT+TGG + Chr8:48311622-48311641 MsG0880044720.01.T03:CDS 20.0%
!! AATAACAAAACTTCTAAGTA+TGG + Chr8:48311452-48311471 MsG0880044720.01.T03:CDS 20.0%
!! TTATTGATCAATATTGGATT+TGG - Chr8:48311737-48311756 None:intergenic 20.0%
!!! AAATATCAACCTTTTATCAT+TGG - Chr8:48311777-48311796 None:intergenic 20.0%
!!! AAATGTTTGAGTTTACAATA+AGG + Chr8:48312041-48312060 MsG0880044720.01.T03:CDS 20.0%
!!! CTTTTGTTATTGATCAATAT+TGG - Chr8:48311743-48311762 None:intergenic 20.0%
!!! TTGTTTCTCATAAGTTATAA+AGG - Chr8:48312179-48312198 None:intergenic 20.0%
! AAACAATACTAATTCTCAAG+TGG + Chr8:48312231-48312250 MsG0880044720.01.T03:CDS 25.0%
! AGACAAATTATGGTTCAAAA+AGG + Chr8:48312269-48312288 MsG0880044720.01.T03:CDS 25.0%
! AGAGTTTCTATGATTGATAA+AGG - Chr8:48311078-48311097 None:intergenic 25.0%
! ATTCATTGACCAATGATAAA+AGG + Chr8:48311765-48311784 MsG0880044720.01.T03:CDS 25.0%
! CCAAAAAAAGTCTTAAATCT+TGG + Chr8:48311497-48311516 MsG0880044720.01.T03:CDS 25.0%
! GAGTTTCTATGATTGATAAA+GGG - Chr8:48311077-48311096 None:intergenic 25.0%
! GGAAAGTTTATTGCAAAAAT+TGG + Chr8:48311029-48311048 MsG0880044720.01.T03:CDS 25.0%
! TCTAGTAAGAAAATTGTTGT+TGG - Chr8:48311903-48311922 None:intergenic 25.0%
!! AATACTTCAAGTGATTTTCT+TGG - Chr8:48311707-48311726 None:intergenic 25.0%
!! AGAAAATCACTTGAAGTATT+TGG + Chr8:48311707-48311726 MsG0880044720.01.T03:CDS 25.0%
!!! CCAAGATTTAAGACTTTTTT+TGG - Chr8:48311500-48311519 None:intergenic 25.0%
!!! TTGTTTCTGCTACTAATTTT+TGG - Chr8:48312211-48312230 None:intergenic 25.0%
AATAGCAAAGAAAAAGAGCA+TGG + Chr8:48311338-48311357 MsG0880044720.01.T03:CDS 30.0%
AATTATGGTTCAAAAAGGCA+TGG + Chr8:48312274-48312293 MsG0880044720.01.T03:CDS 30.0%
CCATACTTGAATATCAAAGA+AGG + Chr8:48311008-48311027 MsG0880044720.01.T03:CDS 30.0%
CCTTCTTTGATATTCAAGTA+TGG - Chr8:48311011-48311030 None:intergenic 30.0%
GCTGAAAAATACTTCAATAG+AGG + Chr8:48311143-48311162 MsG0880044720.01.T03:CDS 30.0%
TCAAAAGCAAGAGAAGTTAA+GGG + Chr8:48311592-48311611 MsG0880044720.01.T03:CDS 30.0%
TGAAAGTTTGCATTTGATGA+AGG - Chr8:48310938-48310957 None:intergenic 30.0%
TGATAAAGGGATTGATTGTT+TGG - Chr8:48311064-48311083 None:intergenic 30.0%
TTACAATAAGGAGTCCAATA+AGG + Chr8:48312053-48312072 MsG0880044720.01.T03:CDS 30.0%
TTCAAAAGCAAGAGAAGTTA+AGG + Chr8:48311591-48311610 MsG0880044720.01.T03:CDS 30.0%
! AGTAAGAAAATTGTTGTTGG+AGG - Chr8:48311900-48311919 None:intergenic 30.0%
! GTAAGAAAATTGTTGTTGGA+GGG - Chr8:48311899-48311918 None:intergenic 30.0%
! TAAAACTGATTTCACTTGCA+TGG - Chr8:48311433-48311452 None:intergenic 30.0%
!! TATAGTAACTTTGAAGCATG+TGG - Chr8:48312346-48312365 None:intergenic 30.0%
AGTGGAGTGAGAAATTCTAT+AGG + Chr8:48311314-48311333 MsG0880044720.01.T03:CDS 35.0%
AGTTTGCATTTGATGAAGGT+TGG - Chr8:48310934-48310953 None:intergenic 35.0%
ATACTAATTCTCAAGTGGCA+AGG + Chr8:48312236-48312255 MsG0880044720.01.T03:CDS 35.0%
ATTGAAACCAAAAGTCGCTA+AGG + Chr8:48312081-48312100 MsG0880044720.01.T03:CDS 35.0%
CAAAATGCACTCTTAAAGAG+TGG + Chr8:48311296-48311315 MsG0880044720.01.T03:CDS 35.0%
GTGGAGTGAGAAATTCTATA+GGG + Chr8:48311315-48311334 MsG0880044720.01.T03:CDS 35.0%
GTTGACACAGAACTAATACT+TGG - Chr8:48311266-48311285 None:intergenic 35.0%
TTGAGTAAGATTTCTGAGCT+AGG - Chr8:48311557-48311576 None:intergenic 35.0%
TTTCCAGGAGAGACAAATTA+TGG + Chr8:48312259-48312278 MsG0880044720.01.T03:CDS 35.0%
! GCAGAAGAAATTGGAGTATT+TGG + Chr8:48311119-48311138 MsG0880044720.01.T03:CDS 35.0%
! GGTGTCTTTTCATCATCTAA+TGG - Chr8:48311686-48311705 None:intergenic 35.0%
! TTTGAGATTGAGAGTCTCAA+AGG + Chr8:48311869-48311888 MsG0880044720.01.T03:CDS 35.0%
!! AGAAAGTACCAAGTTGAGTA+TGG + Chr8:48311236-48311255 MsG0880044720.01.T03:CDS 35.0%
!! CACTCTTTAAGAGTGCATTT+TGG - Chr8:48311298-48311317 None:intergenic 35.0%
!! GTATTAGTTCTGTGTCAACA+TGG + Chr8:48311267-48311286 MsG0880044720.01.T03:CDS 35.0%
!!! CATTTGATGAAGGTTGGTTT+TGG - Chr8:48310928-48310947 None:intergenic 35.0%
!!! TTAGCGACTTTTGGTTTCAA+TGG - Chr8:48312082-48312101 None:intergenic 35.0%
AAACTCTCCTCTTCATCAAG+TGG + Chr8:48311091-48311110 MsG0880044720.01.T03:CDS 40.0%
AAGCAAGAGAAGTTAAGGGT+AGG + Chr8:48311596-48311615 MsG0880044720.01.T03:CDS 40.0%
AGGTACTTTGTAGAAGGTCT+TGG - Chr8:48311182-48311201 None:intergenic 40.0%
ATGGAGAGAAAACAGCATCA+TGG - Chr8:48310992-48311011 None:intergenic 40.0%
CACAAAGCTGTTAGAGTTTC+TGG + Chr8:48312148-48312167 MsG0880044720.01.T03:CDS 40.0%
CAGAAACTCTAACAGCTTTG+TGG - Chr8:48312150-48312169 None:intergenic 40.0%
GGTTTCAATGGTGTCCTTAT+TGG - Chr8:48312070-48312089 None:intergenic 40.0%
GTGGAAAAGGCAGAAGAAAT+TGG + Chr8:48311110-48311129 MsG0880044720.01.T03:CDS 40.0%
TCCTCAGAGAAAGGAAACAA+TGG + Chr8:48311202-48311221 MsG0880044720.01.T03:CDS 40.0%
TCCTCTTCATCAAGTGGAAA+AGG + Chr8:48311097-48311116 MsG0880044720.01.T03:CDS 40.0%
TCTAAGTATGGTGCAGTTCA+AGG + Chr8:48311464-48311483 MsG0880044720.01.T03:CDS 40.0%
TTGGAGTTCCATACTCAACT+TGG - Chr8:48311247-48311266 None:intergenic 40.0%
! AAAAGGCATGGACAACAACA+TGG + Chr8:48312286-48312305 MsG0880044720.01.T03:CDS 40.0%
! AAAGTACCTTCCTCAGAGAA+AGG + Chr8:48311193-48311212 MsG0880044720.01.T03:CDS 40.0%
! GAACCATAATTTGTCTCTCC+TGG - Chr8:48312265-48312284 None:intergenic 40.0%
! TTGTTTCCTTTCTCTGAGGA+AGG - Chr8:48311202-48311221 None:intergenic 40.0%
!! TGAGGAAGGTACTTTGTAGA+AGG - Chr8:48311188-48311207 None:intergenic 40.0%
!!! ATGAAGGTTGGTTTTGGTAG+TGG - Chr8:48310922-48310941 None:intergenic 40.0%
AGAAAACAGCATCATGGAGG+TGG - Chr8:48310986-48311005 None:intergenic 45.0%
CATTCTATGCTTGCCTCACT+CGG - Chr8:48311974-48311993 None:intergenic 45.0%
GAGAGAAAACAGCATCATGG+AGG - Chr8:48310989-48311008 None:intergenic 45.0%
GCCATTGTTTCCTTTCTCTG+AGG - Chr8:48311206-48311225 None:intergenic 45.0%
TCACTCGGCGCATAACAATT+CGG - Chr8:48311959-48311978 None:intergenic 45.0%
TTATACCACACCACCATTGC+AGG + Chr8:48312309-48312328 MsG0880044720.01.T03:CDS 45.0%
! GCCTTTTCCACTTGATGAAG+AGG - Chr8:48311101-48311120 None:intergenic 45.0%
CACTCGGCGCATAACAATTC+GGG - Chr8:48311958-48311977 None:intergenic 50.0%
CGAGTGAGGCAAGCATAGAA+TGG + Chr8:48311972-48311991 MsG0880044720.01.T03:CDS 50.0%
GAATTGTTATGCGCCGAGTG+AGG + Chr8:48311958-48311977 MsG0880044720.01.T03:CDS 50.0%
GCGCATAACAATTCGGGCTA+AGG - Chr8:48311952-48311971 None:intergenic 50.0%
GGCAAGCATAGAATGGAGTG+TGG + Chr8:48311979-48311998 MsG0880044720.01.T03:CDS 50.0%
TCTCAAGTGGCAAGGTTTCC+AGG + Chr8:48312244-48312263 MsG0880044720.01.T03:CDS 50.0%
TGAAGCATGTGGCGAGTTAG+AGG - Chr8:48312335-48312354 None:intergenic 50.0%
TTGCATCCCAACAACATGCC+AGG - Chr8:48312124-48312143 None:intergenic 50.0%
! GGTGTCTCCTTAGCGACTTT+TGG - Chr8:48312091-48312110 None:intergenic 50.0%
AAGTCGCTAAGGAGACACCG+AGG + Chr8:48312092-48312111 MsG0880044720.01.T03:CDS 55.0%
GAGTTAGAGGCCTGCAATGG+TGG - Chr8:48312322-48312341 None:intergenic 55.0%
GGCGAGTTAGAGGCCTGCAA+TGG - Chr8:48312325-48312344 None:intergenic 60.0%
TCGCTAAGGAGACACCGAGG+CGG + Chr8:48312095-48312114 MsG0880044720.01.T03:CDS 60.0%
! AGAGGCCTGCAATGGTGGTG+TGG - Chr8:48312317-48312336 None:intergenic 60.0%
CGGCGGCCTGGCATGTTGTT+GGG + Chr8:48312115-48312134 MsG0880044720.01.T03:CDS 65.0%
CTAAGGAGACACCGAGGCGG+CGG + Chr8:48312098-48312117 MsG0880044720.01.T03:CDS 65.0%
AACATGCCAGGCCGCCGCCT+CGG - Chr8:48312112-48312131 None:intergenic 70.0%
GCGGCGGCCTGGCATGTTGT+TGG + Chr8:48312114-48312133 MsG0880044720.01.T03:CDS 70.0%
! GAGACACCGAGGCGGCGGCC+TGG + Chr8:48312103-48312122 MsG0880044720.01.T03:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 48310903 48312372 48310903 ID=MsG0880044720.01;Name=MsG0880044720.01
Chr8 mRNA 48310903 48312372 48310903 ID=MsG0880044720.01.T01;Parent=MsG0880044720.01;Name=MsG0880044720.01.T01;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|0|0|2|0|477
Chr8 exon 48310903 48311597 48310903 ID=MsG0880044720.01.T01:exon:19882;Parent=MsG0880044720.01.T01
Chr8 exon 48311634 48312372 48311634 ID=MsG0880044720.01.T01:exon:19883;Parent=MsG0880044720.01.T01
Chr8 CDS 48310903 48311597 48310903 ID=MsG0880044720.01.T01:cds;Parent=MsG0880044720.01.T01
Chr8 CDS 48311634 48312372 48311634 ID=MsG0880044720.01.T01:cds;Parent=MsG0880044720.01.T01
Chr8 mRNA 48310903 48312372 48310903 ID=MsG0880044720.01.T02;Parent=MsG0880044720.01;Name=MsG0880044720.01.T02;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|2|0|463
Chr8 exon 48310903 48311613 48310903 ID=MsG0880044720.01.T02:exon:19884;Parent=MsG0880044720.01.T02
Chr8 exon 48311692 48312372 48311692 ID=MsG0880044720.01.T02:exon:19885;Parent=MsG0880044720.01.T02
Chr8 CDS 48310903 48311613 48310903 ID=MsG0880044720.01.T02:cds;Parent=MsG0880044720.01.T02
Chr8 CDS 48311692 48312372 48311692 ID=MsG0880044720.01.T02:cds;Parent=MsG0880044720.01.T02
Chr8 mRNA 48310903 48312372 48310903 ID=MsG0880044720.01.T03;Parent=MsG0880044720.01;Name=MsG0880044720.01.T03;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|489
Chr8 exon 48310903 48312372 48310903 ID=MsG0880044720.01.T03:exon:19886;Parent=MsG0880044720.01.T03
Chr8 CDS 48310903 48312372 48310903 ID=MsG0880044720.01.T03:cds;Parent=MsG0880044720.01.T03
Gene Sequence

>MsG0880044720.01.T01

ATGTTTACTTTATCTTCCACTACCAAAACCAACCTTCATCAAATGCAAACTTTCAACACTGAAAACAACAACAATAACAACCACCTCCATGATGCTGTTTTCTCTCCATACTTGAATATCAAAGAAGGAAAGTTTATTGCAAAAATTGGTGAATCAAGCCAAACAATCAATCCCTTTATCAATCATAGAAACTCTCCTCTTCATCAAGTGGAAAAGGCAGAAGAAATTGGAGTATTTGGAGCTGAAAAATACTTCAATAGAGGAGAAGTTGATACTCCAAGACCTTCTACAAAGTACCTTCCTCAGAGAAAGGAAACAATGGCTATAGAAACTAGAAAGTACCAAGTTGAGTATGGAACTCCAAGTATTAGTTCTGTGTCAACATGGAACAGCCAAAATGCACTCTTAAAGAGTGGAGTGAGAAATTCTATAGGGAATAGCAAAGAAAAAGAGCATGGTAAGAGTGTTCTATCGAGTCTTCGTCTCAAATGCTCTTGTTCTGATAAGAATTCTGTTGATATCAATGACCATGCAAGTGAAATCAGTTTTAATAACAAAACTTCTAAGTATGGTGCAGTTCAAGGTAAAACAACTCCAAAAAAAGTCTTAAATCTTGGTCTTGATGATGATCTTTCAGTTAGAATAAGAAAGCCTAGCTCAGAAATCTTACTCAACAAAGATGTTTACTTTCAAAATAATAGTTTGGCTTCTAACTCAAGAAATCATCTTGTTCAAATGCAAAATCCATTAGATGATGAAAAGACACCAAGAAAATCACTTGAAGTATTTGGCTCACCAAATCCAATATTGATCAATAACAAAAGAAATTCATTGACCAATGATAAAAGGTTGATATTTCCAAAAATGAAAGAAATTGATAATGCAAACTATGATGATGATGATGCTGCAAGTGATGCGAGTTCAGATTTATTTGAGATTGAGAGTCTCAAAGGAAAACCCTCCAACAACAATTTTCTTACTAGACAGACATCAGATGCTGCTTCAAGTTGCCTTAGCCCGAATTGTTATGCGCCGAGTGAGGCAAGCATAGAATGGAGTGTGGTAACTGCAAGTGCTGCAGTTACGTCAGATTGCGAAGATCAAATGTTTGAGTTTACAATAAGGAGTCCAATAAGGACACCATTGAAACCAAAAGTCGCTAAGGAGACACCGAGGCGGCGGCCTGGCATGTTGTTGGGATGCAAGAGCCACAAAGCTGTTAGAGTTTCTGGTGATGCCTTTATAACTTATGAGAAACAAAGTTTAAGTCCAAAAATTAGTAGCAGAAACAAAAACAATACTAATTCTCAAGTGGCAAGGTTTCCAGGAGAGACAAATTATGGTTCAAAAAGGCATGGACAACAACATGGTTATACCACACCACCATTGCAGGCCTCTAACTCGCCACATGCTTCAAAGTTACTATACATTTAG

>MsG0880044720.01.T02

ATGTTTACTTTATCTTCCACTACCAAAACCAACCTTCATCAAATGCAAACTTTCAACACTGAAAACAACAACAATAACAACCACCTCCATGATGCTGTTTTCTCTCCATACTTGAATATCAAAGAAGGAAAGTTTATTGCAAAAATTGGTGAATCAAGCCAAACAATCAATCCCTTTATCAATCATAGAAACTCTCCTCTTCATCAAGTGGAAAAGGCAGAAGAAATTGGAGTATTTGGAGCTGAAAAATACTTCAATAGAGGAGAAGTTGATACTCCAAGACCTTCTACAAAGTACCTTCCTCAGAGAAAGGAAACAATGGCTATAGAAACTAGAAAGTACCAAGTTGAGTATGGAACTCCAAGTATTAGTTCTGTGTCAACATGGAACAGCCAAAATGCACTCTTAAAGAGTGGAGTGAGAAATTCTATAGGGAATAGCAAAGAAAAAGAGCATGGTAAGAGTGTTCTATCGAGTCTTCGTCTCAAATGCTCTTGTTCTGATAAGAATTCTGTTGATATCAATGACCATGCAAGTGAAATCAGTTTTAATAACAAAACTTCTAAGTATGGTGCAGTTCAAGGTAAAACAACTCCAAAAAAAGTCTTAAATCTTGGTCTTGATGATGATCTTTCAGTTAGAATAAGAAAGCCTAGCTCAGAAATCTTACTCAACAAAGATGTTTACTTTCAAAAGCAAGAGAAGTTAAGGGATGAAAAGACACCAAGAAAATCACTTGAAGTATTTGGCTCACCAAATCCAATATTGATCAATAACAAAAGAAATTCATTGACCAATGATAAAAGGTTGATATTTCCAAAAATGAAAGAAATTGATAATGCAAACTATGATGATGATGATGCTGCAAGTGATGCGAGTTCAGATTTATTTGAGATTGAGAGTCTCAAAGGAAAACCCTCCAACAACAATTTTCTTACTAGACAGACATCAGATGCTGCTTCAAGTTGCCTTAGCCCGAATTGTTATGCGCCGAGTGAGGCAAGCATAGAATGGAGTGTGGTAACTGCAAGTGCTGCAGTTACGTCAGATTGCGAAGATCAAATGTTTGAGTTTACAATAAGGAGTCCAATAAGGACACCATTGAAACCAAAAGTCGCTAAGGAGACACCGAGGCGGCGGCCTGGCATGTTGTTGGGATGCAAGAGCCACAAAGCTGTTAGAGTTTCTGGTGATGCCTTTATAACTTATGAGAAACAAAGTTTAAGTCCAAAAATTAGTAGCAGAAACAAAAACAATACTAATTCTCAAGTGGCAAGGTTTCCAGGAGAGACAAATTATGGTTCAAAAAGGCATGGACAACAACATGGTTATACCACACCACCATTGCAGGCCTCTAACTCGCCACATGCTTCAAAGTTACTATACATTTAG

>MsG0880044720.01.T03

ATGTTTACTTTATCTTCCACTACCAAAACCAACCTTCATCAAATGCAAACTTTCAACACTGAAAACAACAACAATAACAACCACCTCCATGATGCTGTTTTCTCTCCATACTTGAATATCAAAGAAGGAAAGTTTATTGCAAAAATTGGTGAATCAAGCCAAACAATCAATCCCTTTATCAATCATAGAAACTCTCCTCTTCATCAAGTGGAAAAGGCAGAAGAAATTGGAGTATTTGGAGCTGAAAAATACTTCAATAGAGGAGAAGTTGATACTCCAAGACCTTCTACAAAGTACCTTCCTCAGAGAAAGGAAACAATGGCTATAGAAACTAGAAAGTACCAAGTTGAGTATGGAACTCCAAGTATTAGTTCTGTGTCAACATGGAACAGCCAAAATGCACTCTTAAAGAGTGGAGTGAGAAATTCTATAGGGAATAGCAAAGAAAAAGAGCATGGTAAGAGTGTTCTATCGAGTCTTCGTCTCAAATGCTCTTGTTCTGATAAGAATTCTGTTGATATCAATGACCATGCAAGTGAAATCAGTTTTAATAACAAAACTTCTAAGTATGGTGCAGTTCAAGGTAAAACAACTCCAAAAAAAGTCTTAAATCTTGGTCTTGATGATGATCTTTCAGTTAGAATAAGAAAGCCTAGCTCAGAAATCTTACTCAACAAAGATGTTTACTTTCAAAAGCAAGAGAAGTTAAGGGTAGGATTAAGCAATGAAAATAATAGTTTGGCTTCTAACTCAAGAAATCATCTTGTTCAAATGCAAAATCCATTAGATGATGAAAAGACACCAAGAAAATCACTTGAAGTATTTGGCTCACCAAATCCAATATTGATCAATAACAAAAGAAATTCATTGACCAATGATAAAAGGTTGATATTTCCAAAAATGAAAGAAATTGATAATGCAAACTATGATGATGATGATGCTGCAAGTGATGCGAGTTCAGATTTATTTGAGATTGAGAGTCTCAAAGGAAAACCCTCCAACAACAATTTTCTTACTAGACAGACATCAGATGCTGCTTCAAGTTGCCTTAGCCCGAATTGTTATGCGCCGAGTGAGGCAAGCATAGAATGGAGTGTGGTAACTGCAAGTGCTGCAGTTACGTCAGATTGCGAAGATCAAATGTTTGAGTTTACAATAAGGAGTCCAATAAGGACACCATTGAAACCAAAAGTCGCTAAGGAGACACCGAGGCGGCGGCCTGGCATGTTGTTGGGATGCAAGAGCCACAAAGCTGTTAGAGTTTCTGGTGATGCCTTTATAACTTATGAGAAACAAAGTTTAAGTCCAAAAATTAGTAGCAGAAACAAAAACAATACTAATTCTCAAGTGGCAAGGTTTCCAGGAGAGACAAATTATGGTTCAAAAAGGCATGGACAACAACATGGTTATACCACACCACCATTGCAGGCCTCTAACTCGCCACATGCTTCAAAGTTACTATACATTTAG

Protein sequence

>MsG0880044720.01.T01

MFTLSSTTKTNLHQMQTFNTENNNNNNHLHDAVFSPYLNIKEGKFIAKIGESSQTINPFINHRNSPLHQVEKAEEIGVFGAEKYFNRGEVDTPRPSTKYLPQRKETMAIETRKYQVEYGTPSISSVSTWNSQNALLKSGVRNSIGNSKEKEHGKSVLSSLRLKCSCSDKNSVDINDHASEISFNNKTSKYGAVQGKTTPKKVLNLGLDDDLSVRIRKPSSEILLNKDVYFQNNSLASNSRNHLVQMQNPLDDEKTPRKSLEVFGSPNPILINNKRNSLTNDKRLIFPKMKEIDNANYDDDDAASDASSDLFEIESLKGKPSNNNFLTRQTSDAASSCLSPNCYAPSEASIEWSVVTASAAVTSDCEDQMFEFTIRSPIRTPLKPKVAKETPRRRPGMLLGCKSHKAVRVSGDAFITYEKQSLSPKISSRNKNNTNSQVARFPGETNYGSKRHGQQHGYTTPPLQASNSPHASKLLYI*

>MsG0880044720.01.T02

MFTLSSTTKTNLHQMQTFNTENNNNNNHLHDAVFSPYLNIKEGKFIAKIGESSQTINPFINHRNSPLHQVEKAEEIGVFGAEKYFNRGEVDTPRPSTKYLPQRKETMAIETRKYQVEYGTPSISSVSTWNSQNALLKSGVRNSIGNSKEKEHGKSVLSSLRLKCSCSDKNSVDINDHASEISFNNKTSKYGAVQGKTTPKKVLNLGLDDDLSVRIRKPSSEILLNKDVYFQKQEKLRDEKTPRKSLEVFGSPNPILINNKRNSLTNDKRLIFPKMKEIDNANYDDDDAASDASSDLFEIESLKGKPSNNNFLTRQTSDAASSCLSPNCYAPSEASIEWSVVTASAAVTSDCEDQMFEFTIRSPIRTPLKPKVAKETPRRRPGMLLGCKSHKAVRVSGDAFITYEKQSLSPKISSRNKNNTNSQVARFPGETNYGSKRHGQQHGYTTPPLQASNSPHASKLLYI*

>MsG0880044720.01.T03

MFTLSSTTKTNLHQMQTFNTENNNNNNHLHDAVFSPYLNIKEGKFIAKIGESSQTINPFINHRNSPLHQVEKAEEIGVFGAEKYFNRGEVDTPRPSTKYLPQRKETMAIETRKYQVEYGTPSISSVSTWNSQNALLKSGVRNSIGNSKEKEHGKSVLSSLRLKCSCSDKNSVDINDHASEISFNNKTSKYGAVQGKTTPKKVLNLGLDDDLSVRIRKPSSEILLNKDVYFQKQEKLRVGLSNENNSLASNSRNHLVQMQNPLDDEKTPRKSLEVFGSPNPILINNKRNSLTNDKRLIFPKMKEIDNANYDDDDAASDASSDLFEIESLKGKPSNNNFLTRQTSDAASSCLSPNCYAPSEASIEWSVVTASAAVTSDCEDQMFEFTIRSPIRTPLKPKVAKETPRRRPGMLLGCKSHKAVRVSGDAFITYEKQSLSPKISSRNKNNTNSQVARFPGETNYGSKRHGQQHGYTTPPLQASNSPHASKLLYI*