AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017074.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017074.01.T03 MTR_3g100420 89.796 49 5 0 5 53 300 348 1.23e-23 93.6
MsG0380017074.01.T03 MTR_3g100420 88.889 45 5 0 55 99 452 496 1.06e-21 88.2
MsG0380017074.01.T03 MTR_2g018630 86.047 43 6 0 57 99 318 360 8.88e-20 82.0
MsG0380017074.01.T03 MTR_2g018630 82.222 45 8 0 55 99 421 465 7.80e-19 80.1
MsG0380017074.01.T03 MTR_2g018600 79.070 43 9 0 57 99 427 469 2.47e-18 78.6
MsG0380017074.01.T03 MTR_4g021490 81.395 43 8 0 57 99 428 470 2.84e-18 78.6
MsG0380017074.01.T03 MTR_4g021520 79.070 43 9 0 57 99 428 470 5.91e-18 77.4
MsG0380017074.01.T03 MTR_2g018590 76.744 43 10 0 57 99 427 469 6.84e-18 77.4
MsG0380017074.01.T03 MTR_4g021510 75.556 45 11 0 55 99 425 469 4.18e-17 75.1
MsG0380017074.01.T03 MTR_4g021530 75.556 45 11 0 55 99 426 470 5.89e-17 74.7
MsG0380017074.01.T03 MTR_4g021500 76.744 43 10 0 57 99 845 887 6.71e-16 71.6
MsG0380017074.01.T03 MTR_4g021500 70.270 37 11 0 57 93 428 464 8.84e-13 62.8
MsG0380017074.01.T03 MTR_4g021500 76.744 43 10 0 57 99 863 905 7.05e-16 71.6
MsG0380017074.01.T03 MTR_4g021500 70.270 37 11 0 57 93 428 464 9.03e-13 62.8
MsG0380017074.01.T03 MTR_4g021535 74.419 43 11 0 57 99 424 466 7.73e-16 71.6
MsG0380017074.01.T03 MTR_4g021535 74.419 43 11 0 57 99 377 419 8.72e-16 71.2
MsG0380017074.01.T03 MTR_2g009200 56.522 46 17 1 57 99 394 439 6.35e-11 57.4
MsG0380017074.01.T02 MTR_3g100420 89.796 49 5 0 5 53 300 348 1.23e-23 93.6
MsG0380017074.01.T02 MTR_3g100420 88.889 45 5 0 55 99 452 496 1.06e-21 88.2
MsG0380017074.01.T02 MTR_2g018630 86.047 43 6 0 57 99 318 360 8.88e-20 82.0
MsG0380017074.01.T02 MTR_2g018630 82.222 45 8 0 55 99 421 465 7.80e-19 80.1
MsG0380017074.01.T02 MTR_2g018600 79.070 43 9 0 57 99 427 469 2.47e-18 78.6
MsG0380017074.01.T02 MTR_4g021490 81.395 43 8 0 57 99 428 470 2.84e-18 78.6
MsG0380017074.01.T02 MTR_4g021520 79.070 43 9 0 57 99 428 470 5.91e-18 77.4
MsG0380017074.01.T02 MTR_2g018590 76.744 43 10 0 57 99 427 469 6.84e-18 77.4
MsG0380017074.01.T02 MTR_4g021510 75.556 45 11 0 55 99 425 469 4.18e-17 75.1
MsG0380017074.01.T02 MTR_4g021530 75.556 45 11 0 55 99 426 470 5.89e-17 74.7
MsG0380017074.01.T02 MTR_4g021500 76.744 43 10 0 57 99 845 887 6.71e-16 71.6
MsG0380017074.01.T02 MTR_4g021500 70.270 37 11 0 57 93 428 464 8.84e-13 62.8
MsG0380017074.01.T02 MTR_4g021500 76.744 43 10 0 57 99 863 905 7.05e-16 71.6
MsG0380017074.01.T02 MTR_4g021500 70.270 37 11 0 57 93 428 464 9.03e-13 62.8
MsG0380017074.01.T02 MTR_4g021535 74.419 43 11 0 57 99 424 466 7.73e-16 71.6
MsG0380017074.01.T02 MTR_4g021535 74.419 43 11 0 57 99 377 419 8.72e-16 71.2
MsG0380017074.01.T02 MTR_2g009200 56.522 46 17 1 57 99 394 439 6.35e-11 57.4
MsG0380017074.01.T01 MTR_3g100420 89.796 49 5 0 5 53 300 348 1.23e-23 93.6
MsG0380017074.01.T01 MTR_3g100420 88.889 45 5 0 55 99 452 496 1.06e-21 88.2
MsG0380017074.01.T01 MTR_2g018630 86.047 43 6 0 57 99 318 360 8.88e-20 82.0
MsG0380017074.01.T01 MTR_2g018630 82.222 45 8 0 55 99 421 465 7.80e-19 80.1
MsG0380017074.01.T01 MTR_2g018600 79.070 43 9 0 57 99 427 469 2.47e-18 78.6
MsG0380017074.01.T01 MTR_4g021490 81.395 43 8 0 57 99 428 470 2.84e-18 78.6
MsG0380017074.01.T01 MTR_4g021520 79.070 43 9 0 57 99 428 470 5.91e-18 77.4
MsG0380017074.01.T01 MTR_2g018590 76.744 43 10 0 57 99 427 469 6.84e-18 77.4
MsG0380017074.01.T01 MTR_4g021510 75.556 45 11 0 55 99 425 469 4.18e-17 75.1
MsG0380017074.01.T01 MTR_4g021530 75.556 45 11 0 55 99 426 470 5.89e-17 74.7
MsG0380017074.01.T01 MTR_4g021500 76.744 43 10 0 57 99 845 887 6.71e-16 71.6
MsG0380017074.01.T01 MTR_4g021500 70.270 37 11 0 57 93 428 464 8.84e-13 62.8
MsG0380017074.01.T01 MTR_4g021500 76.744 43 10 0 57 99 863 905 7.05e-16 71.6
MsG0380017074.01.T01 MTR_4g021500 70.270 37 11 0 57 93 428 464 9.03e-13 62.8
MsG0380017074.01.T01 MTR_4g021535 74.419 43 11 0 57 99 424 466 7.73e-16 71.6
MsG0380017074.01.T01 MTR_4g021535 74.419 43 11 0 57 99 377 419 8.72e-16 71.2
MsG0380017074.01.T01 MTR_2g009200 56.522 46 17 1 57 99 394 439 6.35e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017074.01.T03 AT1G33540 72.727 44 11 1 56 99 422 464 3.93e-15 69.7
MsG0380017074.01.T03 AT1G33540 71.111 45 12 1 55 99 378 421 8.81e-15 68.6
MsG0380017074.01.T03 AT3G10450 70.455 44 12 1 56 99 395 437 3.76e-14 66.6
MsG0380017074.01.T03 AT3G10450 70.455 44 12 1 56 99 352 394 4.25e-14 66.6
MsG0380017074.01.T03 AT2G23010 75.000 44 10 1 56 99 395 437 6.75e-14 66.2
MsG0380017074.01.T03 AT2G22920 53.968 63 23 2 37 99 200 256 2.35e-13 63.9
MsG0380017074.01.T03 AT2G22990 68.182 44 13 1 56 99 277 319 2.45e-13 64.3
MsG0380017074.01.T03 AT2G22980 69.767 43 12 1 57 99 389 430 2.51e-13 64.3
MsG0380017074.01.T03 AT5G09640 64.444 45 15 1 55 99 422 465 2.55e-13 64.3
MsG0380017074.01.T03 AT2G22990 68.182 44 13 1 56 99 391 433 2.97e-13 64.3
MsG0380017074.01.T03 AT1G73270 66.667 45 14 1 55 99 398 441 3.80e-13 63.9
MsG0380017074.01.T03 AT1G73270 66.667 45 14 1 55 99 398 441 3.90e-13 63.9
MsG0380017074.01.T03 AT2G22920 70.455 44 12 1 56 99 393 435 4.02e-13 63.9
MsG0380017074.01.T03 AT2G22960 65.909 44 14 1 56 99 142 184 4.20e-13 62.0
MsG0380017074.01.T03 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T03 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T03 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T03 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T03 AT5G36180 68.182 44 13 1 56 99 399 441 8.79e-13 62.8
MsG0380017074.01.T03 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T03 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T03 AT3G12240 67.442 43 13 1 57 99 395 436 2.64e-12 61.6
MsG0380017074.01.T03 AT2G23010 70.455 44 12 1 56 99 395 437 2.77e-12 61.6
MsG0380017074.01.T03 AT2G22970 69.767 43 12 1 57 99 392 433 3.27e-12 61.2
MsG0380017074.01.T03 AT1G73290 67.442 43 13 1 57 99 397 438 3.34e-12 61.2
MsG0380017074.01.T03 AT1G73280 63.636 44 15 1 56 99 399 441 3.34e-12 61.2
MsG0380017074.01.T03 AT1G73280 63.636 44 15 1 56 99 272 314 3.80e-12 60.8
MsG0380017074.01.T03 AT1G73280 63.636 44 15 1 56 99 297 339 3.85e-12 60.8
MsG0380017074.01.T03 AT3G12230 67.442 43 13 1 57 99 394 435 4.26e-12 60.8
MsG0380017074.01.T03 AT3G12203 64.444 45 15 1 55 99 394 437 4.43e-12 60.8
MsG0380017074.01.T03 AT3G12203 64.444 45 15 1 55 99 373 416 4.43e-12 60.8
MsG0380017074.01.T03 AT3G12203 64.444 45 15 1 55 99 336 379 4.71e-12 60.8
MsG0380017074.01.T03 AT2G22990 63.636 44 15 1 56 99 277 319 9.73e-12 59.7
MsG0380017074.01.T03 AT2G22990 63.636 44 15 1 56 99 382 424 1.38e-11 59.3
MsG0380017074.01.T02 AT1G33540 72.727 44 11 1 56 99 422 464 3.93e-15 69.7
MsG0380017074.01.T02 AT1G33540 71.111 45 12 1 55 99 378 421 8.81e-15 68.6
MsG0380017074.01.T02 AT3G10450 70.455 44 12 1 56 99 395 437 3.76e-14 66.6
MsG0380017074.01.T02 AT3G10450 70.455 44 12 1 56 99 352 394 4.25e-14 66.6
MsG0380017074.01.T02 AT2G23010 75.000 44 10 1 56 99 395 437 6.75e-14 66.2
MsG0380017074.01.T02 AT2G22920 53.968 63 23 2 37 99 200 256 2.35e-13 63.9
MsG0380017074.01.T02 AT2G22990 68.182 44 13 1 56 99 277 319 2.45e-13 64.3
MsG0380017074.01.T02 AT2G22980 69.767 43 12 1 57 99 389 430 2.51e-13 64.3
MsG0380017074.01.T02 AT5G09640 64.444 45 15 1 55 99 422 465 2.55e-13 64.3
MsG0380017074.01.T02 AT2G22990 68.182 44 13 1 56 99 391 433 2.97e-13 64.3
MsG0380017074.01.T02 AT1G73270 66.667 45 14 1 55 99 398 441 3.80e-13 63.9
MsG0380017074.01.T02 AT1G73270 66.667 45 14 1 55 99 398 441 3.90e-13 63.9
MsG0380017074.01.T02 AT2G22920 70.455 44 12 1 56 99 393 435 4.02e-13 63.9
MsG0380017074.01.T02 AT2G22960 65.909 44 14 1 56 99 142 184 4.20e-13 62.0
MsG0380017074.01.T02 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T02 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T02 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T02 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T02 AT5G36180 68.182 44 13 1 56 99 399 441 8.79e-13 62.8
MsG0380017074.01.T02 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T02 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T02 AT3G12240 67.442 43 13 1 57 99 395 436 2.64e-12 61.6
MsG0380017074.01.T02 AT2G23010 70.455 44 12 1 56 99 395 437 2.77e-12 61.6
MsG0380017074.01.T02 AT2G22970 69.767 43 12 1 57 99 392 433 3.27e-12 61.2
MsG0380017074.01.T02 AT1G73290 67.442 43 13 1 57 99 397 438 3.34e-12 61.2
MsG0380017074.01.T02 AT1G73280 63.636 44 15 1 56 99 399 441 3.34e-12 61.2
MsG0380017074.01.T02 AT1G73280 63.636 44 15 1 56 99 272 314 3.80e-12 60.8
MsG0380017074.01.T02 AT1G73280 63.636 44 15 1 56 99 297 339 3.85e-12 60.8
MsG0380017074.01.T02 AT3G12230 67.442 43 13 1 57 99 394 435 4.26e-12 60.8
MsG0380017074.01.T02 AT3G12203 64.444 45 15 1 55 99 394 437 4.43e-12 60.8
MsG0380017074.01.T02 AT3G12203 64.444 45 15 1 55 99 373 416 4.43e-12 60.8
MsG0380017074.01.T02 AT3G12203 64.444 45 15 1 55 99 336 379 4.71e-12 60.8
MsG0380017074.01.T02 AT2G22990 63.636 44 15 1 56 99 277 319 9.73e-12 59.7
MsG0380017074.01.T02 AT2G22990 63.636 44 15 1 56 99 382 424 1.38e-11 59.3
MsG0380017074.01.T01 AT1G33540 72.727 44 11 1 56 99 422 464 3.93e-15 69.7
MsG0380017074.01.T01 AT1G33540 71.111 45 12 1 55 99 378 421 8.81e-15 68.6
MsG0380017074.01.T01 AT3G10450 70.455 44 12 1 56 99 395 437 3.76e-14 66.6
MsG0380017074.01.T01 AT3G10450 70.455 44 12 1 56 99 352 394 4.25e-14 66.6
MsG0380017074.01.T01 AT2G23010 75.000 44 10 1 56 99 395 437 6.75e-14 66.2
MsG0380017074.01.T01 AT2G22920 53.968 63 23 2 37 99 200 256 2.35e-13 63.9
MsG0380017074.01.T01 AT2G22990 68.182 44 13 1 56 99 277 319 2.45e-13 64.3
MsG0380017074.01.T01 AT2G22980 69.767 43 12 1 57 99 389 430 2.51e-13 64.3
MsG0380017074.01.T01 AT5G09640 64.444 45 15 1 55 99 422 465 2.55e-13 64.3
MsG0380017074.01.T01 AT2G22990 68.182 44 13 1 56 99 391 433 2.97e-13 64.3
MsG0380017074.01.T01 AT1G73270 66.667 45 14 1 55 99 398 441 3.80e-13 63.9
MsG0380017074.01.T01 AT1G73270 66.667 45 14 1 55 99 398 441 3.90e-13 63.9
MsG0380017074.01.T01 AT2G22920 70.455 44 12 1 56 99 393 435 4.02e-13 63.9
MsG0380017074.01.T01 AT2G22960 65.909 44 14 1 56 99 142 184 4.20e-13 62.0
MsG0380017074.01.T01 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T01 AT2G23000 72.727 44 11 1 56 99 395 437 4.84e-13 63.5
MsG0380017074.01.T01 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T01 AT1G73300 65.909 44 14 1 56 99 399 441 8.54e-13 62.8
MsG0380017074.01.T01 AT5G36180 68.182 44 13 1 56 99 399 441 8.79e-13 62.8
MsG0380017074.01.T01 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T01 AT5G36180 68.182 44 13 1 56 99 297 339 8.83e-13 62.8
MsG0380017074.01.T01 AT3G12240 67.442 43 13 1 57 99 395 436 2.64e-12 61.6
MsG0380017074.01.T01 AT2G23010 70.455 44 12 1 56 99 395 437 2.77e-12 61.6
MsG0380017074.01.T01 AT2G22970 69.767 43 12 1 57 99 392 433 3.27e-12 61.2
MsG0380017074.01.T01 AT1G73290 67.442 43 13 1 57 99 397 438 3.34e-12 61.2
MsG0380017074.01.T01 AT1G73280 63.636 44 15 1 56 99 399 441 3.34e-12 61.2
MsG0380017074.01.T01 AT1G73280 63.636 44 15 1 56 99 272 314 3.80e-12 60.8
MsG0380017074.01.T01 AT1G73280 63.636 44 15 1 56 99 297 339 3.85e-12 60.8
MsG0380017074.01.T01 AT3G12230 67.442 43 13 1 57 99 394 435 4.26e-12 60.8
MsG0380017074.01.T01 AT3G12203 64.444 45 15 1 55 99 394 437 4.43e-12 60.8
MsG0380017074.01.T01 AT3G12203 64.444 45 15 1 55 99 373 416 4.43e-12 60.8
MsG0380017074.01.T01 AT3G12203 64.444 45 15 1 55 99 336 379 4.71e-12 60.8
MsG0380017074.01.T01 AT2G22990 63.636 44 15 1 56 99 277 319 9.73e-12 59.7
MsG0380017074.01.T01 AT2G22990 63.636 44 15 1 56 99 382 424 1.38e-11 59.3

Find 30 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGTCTTAATTCTCTTTA+TGG 0.196588 3:-91634066 MsG0380017074.01.T01:three_prime_UTR
CTCCAAGAGTATATATATAA+AGG 0.272621 3:-91633972 MsG0380017074.01.T01:three_prime_UTR
AGGGAACCAGGGTGAGAAAA+AGG 0.314860 3:-91633952 MsG0380017074.01.T01:three_prime_UTR
CGCAATTTCACACGACTTGT+AGG 0.316748 3:+91634027 None:intergenic
TAATTCTCTTTATGGCATAT+TGG 0.332579 3:-91634058 MsG0380017074.01.T01:three_prime_UTR
AATATAGGAGCAAGTTCATT+TGG 0.380072 3:-91634185 MsG0380017074.01.T01:intron
TTCATAATTAGTAATAATAT+AGG 0.381562 3:-91634200 MsG0380017074.01.T01:intron
TCCCTTTATATATATACTCT+TGG 0.390301 3:+91633970 None:intergenic
TAGTAGAAGTGTAGAACTTT+TGG 0.398021 3:-91634098 MsG0380017074.01.T01:three_prime_UTR
TCCAAGAGTATATATATAAA+GGG 0.437908 3:-91633971 MsG0380017074.01.T01:three_prime_UTR
AAATCACATATACAATGGTA+TGG 0.445331 3:+91633877 None:intergenic
TAGTGTCATAGGCTAGGAAT+AGG 0.477878 3:+91634119 None:intergenic
GCATTCTTCACGTTTGTACT+CGG 0.481386 3:+91634316 None:intergenic
CATTCTTCACGTTTGTACTC+GGG 0.496306 3:+91634317 None:intergenic
CTACAAGTCGTGTGAAATTG+CGG 0.534935 3:-91634026 MsG0380017074.01.T01:three_prime_UTR
TACACTTCTACTAGTGTCAT+AGG 0.536966 3:+91634108 None:intergenic
TATATAAAATTACAGGGAGG+AGG 0.552360 3:-91634350 MsG0380017074.01.T01:intron
GCATTAATTAATTCCTAGAG+TGG 0.553204 3:+91634260 None:intergenic
AATCACATATACAATGGTAT+GGG 0.557537 3:+91633878 None:intergenic
GATATCTAATTACCCACTCT+AGG 0.558407 3:-91634273 MsG0380017074.01.T01:exon
GTATATATATAAAGGGAACC+AGG 0.560088 3:-91633964 MsG0380017074.01.T01:three_prime_UTR
GTTATATCGTGAGAAGAAAG+TGG 0.561064 3:+91634144 None:intergenic
TCATCATGTTGAACTCAGCT+TGG 0.570115 3:+91634236 None:intergenic
ATTACAGGGAGGAGGACATA+CGG 0.590098 3:-91634342 MsG0380017074.01.T01:intron
TTCTACTAGTGTCATAGGCT+AGG 0.596512 3:+91634113 None:intergenic
AATGCTTAGCCATGTTCAGT+AGG 0.600787 3:-91634298 MsG0380017074.01.T01:CDS
GCTTAGCCATGTTCAGTAGG+TGG 0.616283 3:-91634295 MsG0380017074.01.T01:CDS
AGATATCCACCTACTGAACA+TGG 0.617483 3:+91634289 None:intergenic
CATTAATTAATTCCTAGAGT+GGG 0.623797 3:+91634261 None:intergenic
TATATATATAAAGGGAACCA+GGG 0.632460 3:-91633963 MsG0380017074.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTGAGAAATTAATTAT+AGG + Chr3:91634849-91634868 None:intergenic 10.0%
!! AATTTATTATTAGAGTTTAA+TGG - Chr3:91634027-91634046 MsG0380017074.01.T01:three_prime_UTR 10.0%
!! TAAAATTAAATGATCAAAAT+TGG - Chr3:91635569-91635588 MsG0380017074.01.T01:intron 10.0%
!! TTCATAATTAGTAATAATAT+AGG - Chr3:91637143-91637162 MsG0380017074.01.T01:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + Chr3:91636145-91636164 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - Chr3:91636097-91636116 MsG0380017074.01.T01:intron 10.0%
!!! TTTTTGTTTTTAATATAATC+TGG - Chr3:91636588-91636607 MsG0380017074.01.T01:intron 10.0%
!! ATGTATTAAAGATATTGTTT+CGG - Chr3:91634870-91634889 MsG0380017074.01.T01:intron 15.0%
!! GTAATGTATATAAAATTACA+GGG - Chr3:91636987-91637006 MsG0380017074.01.T01:intron 15.0%
!! TATATATAGATATCATAAAC+AGG + Chr3:91636953-91636972 None:intergenic 15.0%
!! TGAATAATATAATGAGAATA+GGG + Chr3:91634487-91634506 None:intergenic 15.0%
!!! AAGTTTTTCAATTTTTACAT+TGG - Chr3:91636172-91636191 MsG0380017074.01.T01:intron 15.0%
!!! AATCGATTAATTTTTTTTTG+AGG + Chr3:91635654-91635673 None:intergenic 15.0%
!!! ACTAAATATACCTTTTTTTA+AGG + Chr3:91636313-91636332 None:intergenic 15.0%
!!! ATCGATTAATTTTTTTTTGA+GGG + Chr3:91635653-91635672 None:intergenic 15.0%
!!! CTCTATATTTTTTTTTTTGT+TGG + Chr3:91635320-91635339 None:intergenic 15.0%
!!! GATTGTTTAAAATTTAAAAG+CGG + Chr3:91634375-91634394 None:intergenic 15.0%
!!! TTTTTTTTTGTTGGTAATAT+CGG + Chr3:91635311-91635330 None:intergenic 15.0%
!! AAAAAAATGAGGGAAAATTA+TGG + Chr3:91634302-91634321 None:intergenic 20.0%
!! AAGGTATATTCCTTAAAAAA+AGG - Chr3:91636300-91636319 MsG0380017074.01.T01:intron 20.0%
!! AATATTCCATAGACTAAAAT+GGG + Chr3:91634226-91634245 None:intergenic 20.0%
!! ATGAAAAATCACATATACAA+TGG + Chr3:91637474-91637493 None:intergenic 20.0%
!! CGTAATGTATATAAAATTAC+AGG - Chr3:91636986-91637005 MsG0380017074.01.T01:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG - Chr3:91635789-91635808 MsG0380017074.01.T01:intron 20.0%
!! GTGAATAATATAATGAGAAT+AGG + Chr3:91634488-91634507 None:intergenic 20.0%
!! TAAATTAATAATGTCAGGAT+CGG - Chr3:91635794-91635813 MsG0380017074.01.T01:intron 20.0%
!! TATAAATCCATTTCAGTATA+TGG - Chr3:91634193-91634212 MsG0380017074.01.T01:intron 20.0%
!!! ATATACTGAAATGGATTTAT+AGG + Chr3:91634194-91634213 None:intergenic 20.0%
!!! ATTTTTTGTCCTTTGTAAAA+AGG + Chr3:91634971-91634990 None:intergenic 20.0%
!!! CTAAAATAATAATTTGTGTC+CGG + Chr3:91636210-91636229 None:intergenic 20.0%
!!! GTTTTAAAATATTACACAAG+CGG + Chr3:91635285-91635304 None:intergenic 20.0%
!!! TCCAAGAGTATATATATAAA+GGG - Chr3:91637372-91637391 MsG0380017074.01.T01:CDS 20.0%
!!! TCGATTAATTTTTTTTTGAG+GGG + Chr3:91635652-91635671 None:intergenic 20.0%
!!! TTTTAAACAATCACAATGAT+TGG - Chr3:91634383-91634402 MsG0380017074.01.T01:intron 20.0%
! AAATCACATATACAATGGTA+TGG + Chr3:91637469-91637488 None:intergenic 25.0%
! AAATCGCACAACTAATTATT+TGG + Chr3:91636614-91636633 None:intergenic 25.0%
! AATCACATATACAATGGTAT+GGG + Chr3:91637468-91637487 None:intergenic 25.0%
! ACAAAGGACAAAAAATGTAA+GGG - Chr3:91634975-91634994 MsG0380017074.01.T01:intron 25.0%
! ACGATATTTGAGGAAATTAA+TGG + Chr3:91634331-91634350 None:intergenic 25.0%
! ATATTCTTGATAGATACACA+AGG - Chr3:91636851-91636870 MsG0380017074.01.T01:intron 25.0%
! ATGTATATAAAATTACAGGG+AGG - Chr3:91636990-91637009 MsG0380017074.01.T01:intron 25.0%
! ATTTAAGCCATATACTGAAA+TGG + Chr3:91634203-91634222 None:intergenic 25.0%
! CAATATTCCATAGACTAAAA+TGG + Chr3:91634227-91634246 None:intergenic 25.0%
! CATTAATTAATTCCTAGAGT+GGG + Chr3:91637085-91637104 None:intergenic 25.0%
! GTTATCGTTCATTAATATAC+AGG - Chr3:91636503-91636522 MsG0380017074.01.T01:intron 25.0%
! TAAGAGAAGAAGTAAAGATA+GGG + Chr3:91633969-91633988 None:intergenic 25.0%
! TAATTCTCTTTATGGCATAT+TGG - Chr3:91637285-91637304 MsG0380017074.01.T01:intron 25.0%
! TACAAAGGACAAAAAATGTA+AGG - Chr3:91634974-91634993 MsG0380017074.01.T01:intron 25.0%
! TATATATATAAAGGGAACCA+GGG - Chr3:91637380-91637399 MsG0380017074.01.T01:CDS 25.0%
! TCCCTTTATATATATACTCT+TGG + Chr3:91637376-91637395 None:intergenic 25.0%
! TGAAGTAAGTACTACTATAA+AGG - Chr3:91635452-91635471 MsG0380017074.01.T01:intron 25.0%
! TTACTTCTATCAATTAACCA+TGG - Chr3:91634584-91634603 MsG0380017074.01.T01:intron 25.0%
! TTTGCATAAATTATAGTCGT+TGG + Chr3:91635596-91635615 None:intergenic 25.0%
! TTTGTACATACCAAACAAAA+AGG - Chr3:91635893-91635912 MsG0380017074.01.T01:intron 25.0%
!! AAGACAATTTTTGTTAACAG+TGG - Chr3:91636643-91636662 MsG0380017074.01.T01:intron 25.0%
!! AGACAATTTTTGTTAACAGT+GGG - Chr3:91636644-91636663 MsG0380017074.01.T01:intron 25.0%
!! CTCCAAGAGTATATATATAA+AGG - Chr3:91637371-91637390 MsG0380017074.01.T01:CDS 25.0%
!! TGTTTAAAATTTAAAAGCGG+AGG + Chr3:91634372-91634391 None:intergenic 25.0%
!! TTTAAAATATTACACAAGCG+CGG + Chr3:91635283-91635302 None:intergenic 25.0%
!!! ACATTTTAAGATTCAAAGGT+AGG - Chr3:91634702-91634721 MsG0380017074.01.T01:intron 25.0%
!!! AGTTTCTGAAGTTCATATTT+TGG - Chr3:91633867-91633886 MsG0380017074.01.T01:three_prime_UTR 25.0%
!!! ATTTTAAGATTCAAAGGTAG+GGG - Chr3:91634704-91634723 MsG0380017074.01.T01:intron 25.0%
!!! CACAACATTTTAAGATTCAA+AGG - Chr3:91634698-91634717 MsG0380017074.01.T01:intron 25.0%
!!! CATTTTAAGATTCAAAGGTA+GGG - Chr3:91634703-91634722 MsG0380017074.01.T01:intron 25.0%
!!! TTAAATCCCATTTTAGTCTA+TGG - Chr3:91634217-91634236 MsG0380017074.01.T01:intron 25.0%
AAAATGAGGGAAAATTATGG+AGG + Chr3:91634299-91634318 None:intergenic 30.0%
AAGTTAACGTCAAGTTAACT+AGG + Chr3:91634638-91634657 None:intergenic 30.0%
AATATAGGAGCAAGTTCATT+TGG - Chr3:91637158-91637177 MsG0380017074.01.T01:intron 30.0%
AATGGTGTGGAAAAAAAATG+AGG + Chr3:91634313-91634332 None:intergenic 30.0%
AATTACGATCACGATATTTG+AGG + Chr3:91634341-91634360 None:intergenic 30.0%
ACAATTAGTTGTTAGTTAGG+AGG + Chr3:91634562-91634581 None:intergenic 30.0%
ACAGTAATGAGACAACAAAT+GGG - Chr3:91634142-91634161 MsG0380017074.01.T01:three_prime_UTR 30.0%
ACCACAATTAGTTGTTAGTT+AGG + Chr3:91634565-91634584 None:intergenic 30.0%
ACCTAAATTCTCAAGTAATG+TGG + Chr3:91635173-91635192 None:intergenic 30.0%
ACTACTGTATTTGCAATTCA+GGG - Chr3:91636385-91636404 MsG0380017074.01.T01:intron 30.0%
ACTATCAAGTAGTAGAATGA+AGG - Chr3:91635523-91635542 MsG0380017074.01.T01:intron 30.0%
AGCTGTCTTAATTCTCTTTA+TGG - Chr3:91637277-91637296 MsG0380017074.01.T01:intron 30.0%
AGTACTACTATAAAGGACAT+TGG - Chr3:91635459-91635478 MsG0380017074.01.T01:intron 30.0%
ATGGTGTGGAAAAAAAATGA+GGG + Chr3:91634312-91634331 None:intergenic 30.0%
ATTCTAATTCTCAAGTAGCA+GGG - Chr3:91636754-91636773 MsG0380017074.01.T01:intron 30.0%
ATTTGAGGAAATTAATGGTG+TGG + Chr3:91634326-91634345 None:intergenic 30.0%
CAATCACAATGATTGGAATT+TGG - Chr3:91634390-91634409 MsG0380017074.01.T01:intron 30.0%
CATGTAAATCTTAGCAGAAA+AGG - Chr3:91636481-91636500 MsG0380017074.01.T01:intron 30.0%
CTAATTTACGTTGAGTTACA+AGG + Chr3:91635958-91635977 None:intergenic 30.0%
CTTGGACCGAAAATTATAAA+GGG - Chr3:91636115-91636134 MsG0380017074.01.T01:intron 30.0%
GCATTAATTAATTCCTAGAG+TGG + Chr3:91637086-91637105 None:intergenic 30.0%
GGGGAACGATTAAATATTAT+TGG + Chr3:91635633-91635652 None:intergenic 30.0%
GTAAGAGAAGAAGTAAAGAT+AGG + Chr3:91633970-91633989 None:intergenic 30.0%
GTACAACAAATGTAAACAAG+AGG - Chr3:91636024-91636043 MsG0380017074.01.T01:intron 30.0%
GTATATATATAAAGGGAACC+AGG - Chr3:91637379-91637398 MsG0380017074.01.T01:CDS 30.0%
TACAGTAATGAGACAACAAA+TGG - Chr3:91634141-91634160 MsG0380017074.01.T01:three_prime_UTR 30.0%
TACTACTGTATTTGCAATTC+AGG - Chr3:91636384-91636403 MsG0380017074.01.T01:intron 30.0%
TATATAAAATTACAGGGAGG+AGG - Chr3:91636993-91637012 MsG0380017074.01.T01:intron 30.0%
TATTAGAGTTTAATGGTCGT+AGG - Chr3:91634034-91634053 MsG0380017074.01.T01:three_prime_UTR 30.0%
TATTCTAATTCTCAAGTAGC+AGG - Chr3:91636753-91636772 MsG0380017074.01.T01:intron 30.0%
TCCACATTACTTGAGAATTT+AGG - Chr3:91635169-91635188 MsG0380017074.01.T01:intron 30.0%
TCCTAACTAACAACTAATTG+TGG - Chr3:91634561-91634580 MsG0380017074.01.T01:intron 30.0%
TCTTGGACCGAAAATTATAA+AGG - Chr3:91636114-91636133 MsG0380017074.01.T01:intron 30.0%
TTAACTATTTCGTGCTTGAA+AGG + Chr3:91636448-91636467 None:intergenic 30.0%
! ATGACATGAAAGTTCCATTT+TGG - Chr3:91636671-91636690 MsG0380017074.01.T01:intron 30.0%
! ATTTTTACATTGGCCCAAAT+CGG - Chr3:91636182-91636201 MsG0380017074.01.T01:intron 30.0%
! GACAATTTTTGTTAACAGTG+GGG - Chr3:91636645-91636664 MsG0380017074.01.T01:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG + Chr3:91636124-91636143 None:intergenic 30.0%
!! CTTTTTGCACTTTTTGCTAA+GGG - Chr3:91634271-91634290 MsG0380017074.01.T01:exon 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + Chr3:91635906-91635925 None:intergenic 30.0%
!! GCGCTTGTGTAATATTTTAA+AGG - Chr3:91635368-91635387 MsG0380017074.01.T01:intron 30.0%
!! TAGTAGAAGTGTAGAACTTT+TGG - Chr3:91637245-91637264 MsG0380017074.01.T01:intron 30.0%
!! TTTTTGCACTTTTTGCTAAG+GGG - Chr3:91634272-91634291 MsG0380017074.01.T01:exon 30.0%
ACACAAGGACTTACTCAAAT+CGG - Chr3:91636866-91636885 MsG0380017074.01.T01:intron 35.0%
ACATTCGAAAGGTAATACAG+TGG - Chr3:91635763-91635782 MsG0380017074.01.T01:intron 35.0%
AGAACTTTGTGCGTAACAAA+TGG - Chr3:91635425-91635444 MsG0380017074.01.T01:intron 35.0%
AGAAGAAGTAAAGATAGGGT+TGG + Chr3:91633965-91633984 None:intergenic 35.0%
CAAGTAGTAGAATGAAGGAT+GGG - Chr3:91635528-91635547 MsG0380017074.01.T01:intron 35.0%
CTTTGTAAAAAGGATCTCGT+TGG + Chr3:91634961-91634980 None:intergenic 35.0%
GATATCTAATTACCCACTCT+AGG - Chr3:91637070-91637089 MsG0380017074.01.T01:intron 35.0%
GTTATATCGTGAGAAGAAAG+TGG + Chr3:91637202-91637221 None:intergenic 35.0%
GTTGTTAGTTAGGAGGATAT+AGG + Chr3:91634555-91634574 None:intergenic 35.0%
TAAAAAGGATCTCGTTGGAT+TGG + Chr3:91634956-91634975 None:intergenic 35.0%
TACACTTCTACTAGTGTCAT+AGG + Chr3:91637238-91637257 None:intergenic 35.0%
TAGAGCTTAAACTCCATTGA+TGG - Chr3:91634434-91634453 MsG0380017074.01.T01:intron 35.0%
TCAAGTAGTAGAATGAAGGA+TGG - Chr3:91635527-91635546 MsG0380017074.01.T01:intron 35.0%
TCTCAGAAACGTAATAGATG+CGG - Chr3:91635025-91635044 MsG0380017074.01.T01:intron 35.0%
TGTATCATTCCACTATCAAG+TGG - Chr3:91635484-91635503 MsG0380017074.01.T01:intron 35.0%
TTTCTCCCATTTGCAATGAA+GGG + Chr3:91634746-91634765 None:intergenic 35.0%
! AAGTTTTCTTCCTCCATCAA+TGG + Chr3:91634450-91634469 None:intergenic 35.0%
! CAACGAGATCCTTTTTACAA+AGG - Chr3:91634959-91634978 MsG0380017074.01.T01:intron 35.0%
! CCTTAGCAAAAAGTGCAAAA+AGG + Chr3:91634273-91634292 None:intergenic 35.0%
! TAGCAAAAAGTGCAAAAAGG+AGG + Chr3:91634270-91634289 None:intergenic 35.0%
! TTCAGGGAAGTATAGGAAAA+TGG - Chr3:91636401-91636420 MsG0380017074.01.T01:intron 35.0%
! TTTGCAATTCAGGGAAGTAT+AGG - Chr3:91636394-91636413 MsG0380017074.01.T01:intron 35.0%
! TTTTCTCCCATTTGCAATGA+AGG + Chr3:91634747-91634766 None:intergenic 35.0%
! TTTTTACATTGGCCCAAATC+GGG - Chr3:91636183-91636202 MsG0380017074.01.T01:intron 35.0%
!! ACTATTCCATCGTTGATGAT+TGG - Chr3:91636721-91636740 MsG0380017074.01.T01:intron 35.0%
!! CCTTTTTGCACTTTTTGCTA+AGG - Chr3:91634270-91634289 MsG0380017074.01.T01:exon 35.0%
!! TAGAAGTGTAGAACTTTTGG+TGG - Chr3:91637248-91637267 MsG0380017074.01.T01:intron 35.0%
AACATTGGATCACTAGGTAG+GGG - Chr3:91635060-91635079 MsG0380017074.01.T01:intron 40.0%
AATGCTTAGCCATGTTCAGT+AGG - Chr3:91637045-91637064 MsG0380017074.01.T01:intron 40.0%
ACATTGCCACCTTATACTGT+CGG - Chr3:91633988-91634007 MsG0380017074.01.T01:three_prime_UTR 40.0%
AGAAGTTACCCGACAGTATA+AGG + Chr3:91634000-91634019 None:intergenic 40.0%
AGACTCATGCATATTTCCTC+GGG - Chr3:91635701-91635720 MsG0380017074.01.T01:intron 40.0%
AGATATCCACCTACTGAACA+TGG + Chr3:91637057-91637076 None:intergenic 40.0%
AGCTTAAACTCCATTGATGG+AGG - Chr3:91634437-91634456 MsG0380017074.01.T01:intron 40.0%
ATACGTCCCTTCATTGCAAA+TGG - Chr3:91634737-91634756 MsG0380017074.01.T01:intron 40.0%
CAGACTCATGCATATTTCCT+CGG - Chr3:91635700-91635719 MsG0380017074.01.T01:intron 40.0%
CATTCTTCACGTTTGTACTC+GGG + Chr3:91637029-91637048 None:intergenic 40.0%
CCTCGAAAATACAGTGTTGT+GGG - Chr3:91635211-91635230 MsG0380017074.01.T01:intron 40.0%
CTACAAGTCGTGTGAAATTG+CGG - Chr3:91637317-91637336 MsG0380017074.01.T01:intron 40.0%
GAAACTCCTGAAATAGTCTG+CGG + Chr3:91633853-91633872 None:intergenic 40.0%
GAACATTGGATCACTAGGTA+GGG - Chr3:91635059-91635078 MsG0380017074.01.T01:intron 40.0%
GAGGAGACTTCTTATTCACA+AGG - Chr3:91633939-91633958 MsG0380017074.01.T01:intron 40.0%
GATGACATTTGCAACTGTGA+AGG - Chr3:91636888-91636907 MsG0380017074.01.T01:intron 40.0%
GATGGAGGAAGAAAACTTGA+AGG - Chr3:91634452-91634471 MsG0380017074.01.T01:intron 40.0%
GCATTCTTCACGTTTGTACT+CGG + Chr3:91637030-91637049 None:intergenic 40.0%
TACGTCCCTTCATTGCAAAT+GGG - Chr3:91634738-91634757 MsG0380017074.01.T01:intron 40.0%
TAGTGTCATAGGCTAGGAAT+AGG + Chr3:91637227-91637246 None:intergenic 40.0%
TCAAAGGTAGGGGAAAATCA+TGG - Chr3:91634714-91634733 MsG0380017074.01.T01:intron 40.0%
TCATCATGTTGAACTCAGCT+TGG + Chr3:91637110-91637129 None:intergenic 40.0%
TCCTCGAAAATACAGTGTTG+TGG - Chr3:91635210-91635229 MsG0380017074.01.T01:intron 40.0%
TTCTACTAGTGTCATAGGCT+AGG + Chr3:91637233-91637252 None:intergenic 40.0%
!! ATTCCATCGTTGATGATTGG+AGG - Chr3:91636724-91636743 MsG0380017074.01.T01:intron 40.0%
!! GTTTGGTTTGCCTAATCCAA+TGG - Chr3:91633903-91633922 MsG0380017074.01.T01:three_prime_UTR 40.0%
!! TTCTGAGATATTACCCGCTT+TGG + Chr3:91635013-91635032 None:intergenic 40.0%
AAGAAGTCTCCTCCTACCAT+TGG + Chr3:91633932-91633951 None:intergenic 45.0%
AATACAGTGTTGTGGGCTTG+AGG - Chr3:91635218-91635237 MsG0380017074.01.T01:intron 45.0%
AATAGATGCGGACTTGAGGT+TGG - Chr3:91635037-91635056 MsG0380017074.01.T01:intron 45.0%
ACAGTTCGACCACTTGATAG+TGG + Chr3:91635496-91635515 None:intergenic 45.0%
ACCACTCCAGCACAAAGATT+AGG + Chr3:91636351-91636370 None:intergenic 45.0%
ACGTAATAGATGCGGACTTG+AGG - Chr3:91635033-91635052 MsG0380017074.01.T01:intron 45.0%
AGTTACCCGACAGTATAAGG+TGG + Chr3:91633997-91634016 None:intergenic 45.0%
ATCCAATGGAAGCCAATGGT+AGG - Chr3:91633917-91633936 MsG0380017074.01.T01:intron 45.0%
ATTACAGGGAGGAGGACATA+CGG - Chr3:91637001-91637020 MsG0380017074.01.T01:intron 45.0%
ATTAGCGTCGTTTGGCCAAT+AGG + Chr3:91635727-91635746 None:intergenic 45.0%
CAAACTCATGCCATGCTTGA+GGG - Chr3:91635084-91635103 MsG0380017074.01.T01:intron 45.0%
CATTGCCACCTTATACTGTC+GGG - Chr3:91633989-91634008 MsG0380017074.01.T01:three_prime_UTR 45.0%
CCACTCCAGCACAAAGATTA+GGG + Chr3:91636350-91636369 None:intergenic 45.0%
CCAGCAGTTACAAGTGGTTA+AGG - Chr3:91634611-91634630 MsG0380017074.01.T01:intron 45.0%
CCTAATCCAATGGAAGCCAA+TGG - Chr3:91633913-91633932 MsG0380017074.01.T01:intron 45.0%
CCTTAACCACTTGTAACTGC+TGG + Chr3:91634614-91634633 None:intergenic 45.0%
CGCAATTTCACACGACTTGT+AGG + Chr3:91637319-91637338 None:intergenic 45.0%
GGAACATTGGATCACTAGGT+AGG - Chr3:91635058-91635077 MsG0380017074.01.T01:intron 45.0%
GGCAAACCAAACTCGCATTT+CGG + Chr3:91633895-91633914 None:intergenic 45.0%
GGTTGGAACATTGGATCACT+AGG - Chr3:91635054-91635073 MsG0380017074.01.T01:intron 45.0%
GTCGAGACTAAGCTGCTAAA+AGG + Chr3:91635118-91635137 None:intergenic 45.0%
TCAAACTCATGCCATGCTTG+AGG - Chr3:91635083-91635102 MsG0380017074.01.T01:intron 45.0%
TGGTGAACATTAGCGTCGTT+TGG + Chr3:91635735-91635754 None:intergenic 45.0%
TGTACTGTAGTAGTAGCCAC+CGG + Chr3:91635140-91635159 None:intergenic 45.0%
TTGGAACCGAAATGCGAGTT+TGG - Chr3:91633886-91633905 MsG0380017074.01.T01:three_prime_UTR 45.0%
TTGTGTCCGCAGACTATTTC+AGG - Chr3:91633844-91633863 MsG0380017074.01.T01:three_prime_UTR 45.0%
TTTAGCAGCTTAGTCTCGAC+CGG - Chr3:91635118-91635137 MsG0380017074.01.T01:intron 45.0%
! CACATTCCTTTTTCTCACCC+TGG + Chr3:91637400-91637419 None:intergenic 45.0%
! CCCACAACACTGTATTTTCG+AGG + Chr3:91635214-91635233 None:intergenic 45.0%
! TTGTAACTGCTGGCTAACCA+TGG + Chr3:91634604-91634623 None:intergenic 45.0%
!! CCATTGGCTTCCATTGGATT+AGG + Chr3:91633916-91633935 None:intergenic 45.0%
!! TTATTTATACAAATAATAAA+AGG - Chr3:91636281-91636300 MsG0380017074.01.T01:intron 5.0%
!!! ATAATAAGATAATAATTTTT+CGG + Chr3:91636146-91636165 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTCA+TGG - Chr3:91635677-91635696 MsG0380017074.01.T01:intron 5.0%
AGGGAACCAGGGTGAGAAAA+AGG - Chr3:91637391-91637410 MsG0380017074.01.T01:CDS 50.0%
ATTTGTGTCCGGTCCCGATT+TGG + Chr3:91636199-91636218 None:intergenic 50.0%
CAATGGAAGCCAATGGTAGG+AGG - Chr3:91633920-91633939 MsG0380017074.01.T01:intron 50.0%
CCATGCACTGCACATTCGAA+AGG - Chr3:91635752-91635771 MsG0380017074.01.T01:intron 50.0%
CCCTAATCTTTGTGCTGGAG+TGG - Chr3:91636347-91636366 MsG0380017074.01.T01:intron 50.0%
CCTTTCGAATGTGCAGTGCA+TGG + Chr3:91635755-91635774 None:intergenic 50.0%
CGGACTTGAGGTTGGAACAT+TGG - Chr3:91635045-91635064 MsG0380017074.01.T01:intron 50.0%
CTGCCTCCAATCATCAACGA+TGG + Chr3:91636730-91636749 None:intergenic 50.0%
GCATATTTCCTCGGGCCTAT+TGG - Chr3:91635709-91635728 MsG0380017074.01.T01:intron 50.0%
GCTCACACAAGATCCAAAGC+GGG - Chr3:91634997-91635016 MsG0380017074.01.T01:intron 50.0%
GCTTAGCCATGTTCAGTAGG+TGG - Chr3:91637048-91637067 MsG0380017074.01.T01:intron 50.0%
GGCTCACACAAGATCCAAAG+CGG - Chr3:91634996-91635015 MsG0380017074.01.T01:intron 50.0%
GTGCACCCTAATCTTTGTGC+TGG - Chr3:91636342-91636361 MsG0380017074.01.T01:intron 50.0%
TTTGTGTCCGGTCCCGATTT+GGG + Chr3:91636198-91636217 None:intergenic 50.0%
! CCACGCTTGAGTTGCCAAAA+TGG + Chr3:91636688-91636707 None:intergenic 50.0%
! GGTTAGCCAGCAGTTACAAG+TGG - Chr3:91634605-91634624 MsG0380017074.01.T01:intron 50.0%
! TCTCGTTGGATTGGAGAGAG+TGG + Chr3:91634947-91634966 None:intergenic 50.0%
!! CCATTTTGGCAACTCAAGCG+TGG - Chr3:91636685-91636704 MsG0380017074.01.T01:intron 50.0%
!! CTCCTACCATTGGCTTCCAT+TGG + Chr3:91633922-91633941 None:intergenic 50.0%
!! TCGTTGATGATTGGAGGCAG+TGG - Chr3:91636730-91636749 MsG0380017074.01.T01:intron 50.0%
ACATTGGCCCAAATCGGGAC+CGG - Chr3:91636188-91636207 MsG0380017074.01.T01:intron 55.0%
CAGTGTTGTGGGCTTGAGGT+TGG - Chr3:91635222-91635241 MsG0380017074.01.T01:intron 55.0%
GGTCTATCAGCCCTCAAGCA+TGG + Chr3:91635097-91635116 None:intergenic 55.0%
AGCAGCTTAGTCTCGACCGG+TGG - Chr3:91635121-91635140 MsG0380017074.01.T01:intron 60.0%
TCGTTTGGCCAATAGGCCCG+AGG + Chr3:91635720-91635739 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 91633841 91637524 91633841 ID=MsG0380017074.01;Name=MsG0380017074.01
Chr3 mRNA 91633843 91637524 91633843 ID=MsG0380017074.01.T01;Parent=MsG0380017074.01;Name=MsG0380017074.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.75|0.8|1|0.5|0.4|5|363|99
Chr3 exon 91633843 91633928 91633843 ID=MsG0380017074.01.T01:exon:12501;Parent=MsG0380017074.01.T01
Chr3 exon 91633949 91634200 91633949 ID=MsG0380017074.01.T01:exon:12500;Parent=MsG0380017074.01.T01
Chr3 exon 91634249 91634357 91634249 ID=MsG0380017074.01.T01:exon:12499;Parent=MsG0380017074.01.T01
Chr3 CDS 91637355 91637524 91637355 ID=MsG0380017074.01.T01:cds;Parent=MsG0380017074.01.T01
Chr3 CDS 91634456 91634501 91634456 ID=MsG0380017074.01.T01:cds;Parent=MsG0380017074.01.T01
Chr3 CDS 91634274 91634357 91634274 ID=MsG0380017074.01.T01:cds;Parent=MsG0380017074.01.T01
Chr3 three_prime_UTR 91634249 91634273 91634249 ID=MsG0380017074.01.T01:three_prime_utr;Parent=MsG0380017074.01.T01
Chr3 three_prime_UTR 91633949 91634200 91633949 ID=MsG0380017074.01.T01:three_prime_utr;Parent=MsG0380017074.01.T01
Chr3 three_prime_UTR 91633843 91633928 91633843 ID=MsG0380017074.01.T01:three_prime_utr;Parent=MsG0380017074.01.T01
Chr3 mRNA 91633842 91637524 91633842 ID=MsG0380017074.01.T02;Parent=MsG0380017074.01;Name=MsG0380017074.01.T02;_AED=0.49;_eAED=0.50;_QI=0|0.66|0.75|1|0.66|0.5|4|412|99
Chr3 exon 91633842 91633928 91633842 ID=MsG0380017074.01.T02:exon:12503;Parent=MsG0380017074.01.T02
Chr3 exon 91633949 91634357 91633949 ID=MsG0380017074.01.T02:exon:12502;Parent=MsG0380017074.01.T02
Chr3 CDS 91637355 91637524 91637355 ID=MsG0380017074.01.T02:cds;Parent=MsG0380017074.01.T02
Chr3 CDS 91634456 91634501 91634456 ID=MsG0380017074.01.T02:cds;Parent=MsG0380017074.01.T02
Chr3 CDS 91634274 91634357 91634274 ID=MsG0380017074.01.T02:cds;Parent=MsG0380017074.01.T02
Chr3 three_prime_UTR 91633949 91634273 91633949 ID=MsG0380017074.01.T02:three_prime_utr;Parent=MsG0380017074.01.T02
Chr3 three_prime_UTR 91633842 91633928 91633842 ID=MsG0380017074.01.T02:three_prime_utr;Parent=MsG0380017074.01.T02
Chr3 mRNA 91633841 91637524 91633841 ID=MsG0380017074.01.T03;Parent=MsG0380017074.01;Name=MsG0380017074.01.T03;_AED=0.49;_eAED=0.50;_QI=0|0.5|0.66|1|1|1|3|433|99
Chr3 exon 91633841 91634357 91633841 ID=MsG0380017074.01.T03:exon:12504;Parent=MsG0380017074.01.T03
Chr3 CDS 91637355 91637524 91637355 ID=MsG0380017074.01.T03:cds;Parent=MsG0380017074.01.T03
Chr3 CDS 91634456 91634501 91634456 ID=MsG0380017074.01.T03:cds;Parent=MsG0380017074.01.T03
Chr3 CDS 91634274 91634357 91634274 ID=MsG0380017074.01.T03:cds;Parent=MsG0380017074.01.T03
Chr3 three_prime_UTR 91633841 91634273 91633841 ID=MsG0380017074.01.T03:three_prime_utr;Parent=MsG0380017074.01.T03
Gene Sequence

>MsG0380017074.01.T03

TTGTTGTGTCCGCAGACTATTTCAGGAGTTTCTGAAGTTCATATTTTGGAACCGAAATGCGAGTTTGGTTTGCCTAATCCAATGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACCCTATCTTTACTTCTTCTCTTACATTGCCACCTTATACTGTCGGATACACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACGGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG

>MsG0380017074.01.T02

TTGTTGTGTCCGCAGACTATTTCAGGAGTTTCTGAAGTTCATATTTTGGAACCGAAATGCGAGTTTGGTTTGCCTAATCCAATGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACCCTATCTTTACTTCTTCTCTTACATTGCCACCTTATACTGTCGGATACACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACGGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG

>MsG0380017074.01.T01

TTGTTGTGTCCGCAGACTATTTCAGGAGTTTCTGAAGTTCATATTTTGGAACCGAAATGCGAGTTTGGTTTGCCTAATCCAATGGAAGCCAATGGTAGGAGGAGACTTCTTATTCACAAGGCCAACCCTATCTTTACTTCTTCTCTTACATTGCCACCTTATACTGTCGGATACACAAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGAGGAGGACATACGGCTCCCGAGTACAAACGTGAAGAATGCTTAGCCATGTTCAGTAGGTGGATATCTAATTACCCACTCTAG

Protein sequence

>MsG0380017074.01.T03

LLCPQTISGVSEVHILEPKCEFGLPNPMEANGRRRLLIHKANPIFTSSLTLPPYTVGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*

>MsG0380017074.01.T02

LLCPQTISGVSEVHILEPKCEFGLPNPMEANGRRRLLIHKANPIFTSSLTLPPYTVGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*

>MsG0380017074.01.T01

LLCPQTISGVSEVHILEPKCEFGLPNPMEANGRRRLLIHKANPIFTSSLTLPPYTVGYTRTYSNRMTFATVKGGGHTAPEYKREECLAMFSRWISNYPL*