Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086180 | XP_003592080.1 | 94.565 | 184 | 10 | 0 | 12 | 195 | 1 | 184 | 4.63e-124 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086180 | G7IBX7 | 94.565 | 184 | 10 | 0 | 12 | 195 | 1 | 184 | 2.21e-124 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006290 | Msa0086180 | 0.800659 | 1.299103e-48 | -8.615850e-47 |
| Msa0011960 | Msa0086180 | 0.830760 | 2.448944e-55 | -8.615850e-47 |
| Msa0013050 | Msa0086180 | -0.801213 | 1.001263e-48 | -8.615850e-47 |
| Msa0025730 | Msa0086180 | 0.817582 | 3.060101e-52 | -8.615850e-47 |
| Msa0027770 | Msa0086180 | 0.801420 | 9.079820e-49 | -8.615850e-47 |
| Msa0032580 | Msa0086180 | 0.823355 | 1.448377e-53 | -8.615850e-47 |
| Msa0033110 | Msa0086180 | 0.820704 | 5.959488e-53 | -8.615850e-47 |
| Msa0033260 | Msa0086180 | 0.812829 | 3.481850e-51 | -8.615850e-47 |
| Msa0043660 | Msa0086180 | 0.867415 | 1.391620e-65 | -8.615850e-47 |
| Msa0047160 | Msa0086180 | 0.839685 | 1.367137e-57 | -8.615850e-47 |
| Msa0054440 | Msa0086180 | 0.807430 | 5.075190e-50 | -8.615850e-47 |
| Msa0054750 | Msa0086180 | 0.812340 | 4.454481e-51 | -8.615850e-47 |
| Msa0056030 | Msa0086180 | 0.801820 | 7.518069e-49 | -8.615850e-47 |
| Msa0057140 | Msa0086180 | 0.823789 | 1.146181e-53 | -8.615850e-47 |
| Msa0073480 | Msa0086180 | 0.804543 | 2.053760e-49 | -8.615850e-47 |
| Msa0075500 | Msa0086180 | 0.813008 | 3.180222e-51 | -8.615850e-47 |
| Msa0086180 | Msa0091410 | 0.817075 | 3.979783e-52 | -8.615850e-47 |
| Msa0086180 | Msa0093960 | 0.805124 | 1.553068e-49 | -8.615850e-47 |
| Msa0086180 | Msa0094470 | 0.829258 | 5.691371e-55 | -8.615850e-47 |
| Msa0086180 | Msa0100300 | 0.803434 | 3.492241e-49 | -8.615850e-47 |
| Msa0086180 | Msa0100740 | 0.802937 | 4.425782e-49 | -8.615850e-47 |
| Msa0086180 | Msa0105620 | 0.815204 | 1.041951e-51 | -8.615850e-47 |
| Msa0086180 | Msa0132440 | 0.885518 | 7.587856e-72 | -8.615850e-47 |
| Msa0086180 | Msa0137550 | 0.858276 | 9.203535e-63 | -8.615850e-47 |
| Msa0086180 | Msa0141340 | 0.813563 | 2.403132e-51 | -8.615850e-47 |
| Msa0086180 | Msa0146770 | 0.842493 | 2.500387e-58 | -8.615850e-47 |
| Msa0086180 | Msa0159170 | 0.818171 | 2.253263e-52 | -8.615850e-47 |
| Msa0086180 | Msa0165950 | 0.824912 | 6.241918e-54 | -8.615850e-47 |
| Msa0086180 | Msa0168230 | 0.806885 | 6.618636e-50 | -8.615850e-47 |
| Msa0086180 | Msa0172970 | 0.812069 | 5.102134e-51 | -8.615850e-47 |
| Msa0086180 | Msa0182030 | 0.830550 | 2.756405e-55 | -8.615850e-47 |
| Msa0086180 | Msa0189300 | 0.843791 | 1.127237e-58 | -8.615850e-47 |
| Msa0086180 | Msa0214710 | 0.821459 | 3.992670e-53 | -8.615850e-47 |
| Msa0086180 | Msa0220720 | 0.804673 | 1.929252e-49 | -8.615850e-47 |
| Msa0086180 | Msa0226470 | 0.816897 | 4.364238e-52 | -8.615850e-47 |
| Msa0086180 | Msa0227400 | 0.806570 | 7.714701e-50 | -8.615850e-47 |
| Msa0086180 | Msa0228070 | 0.809343 | 1.982825e-50 | -8.615850e-47 |
| Msa0086180 | Msa0229170 | 0.833657 | 4.702867e-56 | -8.615850e-47 |
| Msa0086180 | Msa0231660 | 0.852196 | 5.411578e-61 | -8.615850e-47 |
| Msa0086180 | Msa0262310 | 0.810886 | 9.222024e-51 | -8.615850e-47 |
| Msa0086180 | Msa0279220 | 0.820341 | 7.220045e-53 | -8.615850e-47 |
| Msa0086180 | Msa0279240 | 0.808631 | 2.816827e-50 | -8.615850e-47 |
| Msa0086180 | Msa0318980 | 0.801147 | 1.032547e-48 | -8.615850e-47 |
| Msa0086180 | Msa0337650 | 0.826882 | 2.125953e-54 | -8.615850e-47 |
| Msa0086180 | Msa0345350 | 0.807422 | 5.093015e-50 | -8.615850e-47 |
| Msa0086180 | Msa0345390 | 0.808380 | 3.186324e-50 | -8.615850e-47 |
| Msa0086180 | Msa0351990 | 0.800680 | 1.286602e-48 | -8.615850e-47 |
| Msa0086180 | Msa0379410 | 0.812197 | 4.786593e-51 | -8.615850e-47 |
| Msa0086180 | Msa0387910 | 0.827886 | 1.221120e-54 | -8.615850e-47 |
| Msa0086180 | Msa0388700 | 0.827311 | 1.677813e-54 | -8.615850e-47 |
| Msa0086180 | Msa0397540 | 0.842260 | 2.882169e-58 | -8.615850e-47 |
| Msa0086180 | Msa0419520 | 0.818496 | 1.901656e-52 | -8.615850e-47 |
| Msa0086180 | Msa0447220 | 0.819771 | 9.750487e-53 | -8.615850e-47 |
| Msa0086180 | Msa0457510 | 0.804775 | 1.837419e-49 | -8.615850e-47 |
| Msa0086180 | Msa0465550 | 0.822216 | 2.666769e-53 | -8.615850e-47 |
| Msa0086180 | Msa0467220 | 0.811402 | 7.129729e-51 | -8.615850e-47 |
| Msa0086180 | Msa0482130 | 0.816910 | 4.333304e-52 | -8.615850e-47 |
| Msa0086180 | Msa0489410 | 0.828345 | 9.464575e-55 | -8.615850e-47 |
| Msa0086180 | Msa0534900 | 0.801823 | 7.508503e-49 | -8.615850e-47 |
| Msa0086180 | Msa0542090 | 0.831758 | 1.392389e-55 | -8.615850e-47 |
| Msa0086180 | Msa0542130 | 0.836873 | 7.251485e-57 | -8.615850e-47 |
| Msa0086180 | Msa0554290 | 0.803715 | 3.053693e-49 | -8.615850e-47 |
| Msa0086180 | Msa0555450 | 0.826120 | 3.229104e-54 | -8.615850e-47 |
| Msa0086180 | Msa0581280 | 0.809303 | 2.022815e-50 | -8.615850e-47 |
| Msa0086180 | Msa0601150 | 0.800709 | 1.269027e-48 | -8.615850e-47 |
| Msa0086180 | Msa0603670 | 0.804808 | 1.808417e-49 | -8.615850e-47 |
| Msa0086180 | Msa0605000 | 0.840407 | 8.856479e-58 | -8.615850e-47 |
| Msa0086180 | Msa0607510 | 0.809053 | 2.288099e-50 | -8.615850e-47 |
| Msa0086180 | Msa0612390 | 0.803587 | 3.246540e-49 | -8.615850e-47 |
| Msa0086180 | Msa0618930 | 0.816556 | 5.204213e-52 | -8.615850e-47 |
| Msa0086180 | Msa0631350 | 0.809773 | 1.602835e-50 | -8.615850e-47 |
| Msa0086180 | Msa0685140 | 0.834875 | 2.327371e-56 | -8.615850e-47 |
| Msa0086180 | Msa0689260 | 0.804615 | 1.983821e-49 | -8.615850e-47 |
| Msa0086180 | Msa0691900 | 0.823310 | 1.484211e-53 | -8.615850e-47 |
| Msa0086180 | Msa0698060 | 0.824806 | 6.609952e-54 | -8.615850e-47 |
| Msa0086180 | Msa0698800 | 0.810138 | 1.337977e-50 | -8.615850e-47 |
| Msa0086180 | Msa0708610 | 0.830962 | 2.185849e-55 | -8.615850e-47 |
| Msa0086180 | Msa0709500 | 0.801958 | 7.042802e-49 | -8.615850e-47 |
| Msa0086180 | Msa0715650 | 0.834596 | 2.735495e-56 | -8.615850e-47 |
| Msa0086180 | Msa0719420 | 0.840785 | 7.054106e-58 | -8.615850e-47 |
| Msa0086180 | Msa0753140 | 0.808290 | 3.330543e-50 | -8.615850e-47 |
| Msa0086180 | Msa0763330 | 0.803807 | 2.922471e-49 | -8.615850e-47 |
| Msa0086180 | Msa0772480 | 0.851613 | 7.918649e-61 | -8.615850e-47 |
| Msa0086180 | Msa0789680 | 0.844082 | 9.424131e-59 | -8.615850e-47 |
| Msa0086180 | Msa0790850 | 0.805831 | 1.104038e-49 | -8.615850e-47 |
| Msa0086180 | Msa0793390 | 0.801378 | 9.262609e-49 | -8.615850e-47 |
| Msa0086180 | Msa0794670 | 0.807688 | 4.472304e-50 | -8.615850e-47 |
| Msa0086180 | Msa0798440 | 0.869674 | 2.594310e-66 | -8.615850e-47 |
| Msa0086180 | Msa0802410 | 0.850923 | 1.240633e-60 | -8.615850e-47 |
| Msa0086180 | Msa0819060 | 0.830763 | 2.444539e-55 | -8.615850e-47 |
| Msa0086180 | Msa0830540 | 0.847218 | 1.329230e-59 | -8.615850e-47 |
| Msa0086180 | Msa0870150 | 0.805078 | 1.587890e-49 | -8.615850e-47 |
| Msa0086180 | Msa0887250 | 0.810670 | 1.027125e-50 | -8.615850e-47 |
| Msa0086180 | Msa0925770 | 0.817106 | 3.916786e-52 | -8.615850e-47 |
| Msa0086180 | Msa0945440 | 0.830298 | 3.178341e-55 | -8.615850e-47 |
| Msa0086180 | Msa0966010 | 0.808090 | 3.674267e-50 | -8.615850e-47 |
| Msa0086180 | Msa0970030 | 0.822820 | 1.930975e-53 | -8.615850e-47 |
| Msa0086180 | Msa0989540 | 0.831635 | 1.492881e-55 | -8.615850e-47 |
| Msa0086180 | Msa1006840 | 0.816637 | 4.989408e-52 | -8.615850e-47 |
| Msa0086180 | Msa1019240 | 0.801140 | 1.036048e-48 | -8.615850e-47 |
| Msa0086180 | Msa1077030 | 0.821266 | 4.424164e-53 | -8.615850e-47 |
| Msa0086180 | Msa1084470 | 0.831539 | 1.576510e-55 | -8.615850e-47 |
| Msa0086180 | Msa1088290 | 0.806121 | 9.590991e-50 | -8.615850e-47 |
| Msa0086180 | Msa1094430 | 0.807136 | 5.856776e-50 | -8.615850e-47 |
| Msa0086180 | Msa1104140 | 0.819104 | 1.383437e-52 | -8.615850e-47 |
| Msa0086180 | Msa1108820 | 0.806792 | 6.925422e-50 | -8.615850e-47 |
| Msa0086180 | Msa1137700 | 0.810684 | 1.019941e-50 | -8.615850e-47 |
| Msa0086180 | Msa1138870 | 0.813117 | 3.011085e-51 | -8.615850e-47 |
| Msa0086180 | Msa1160590 | 0.824848 | 6.463306e-54 | -8.615850e-47 |
| Msa0086180 | Msa1171360 | 0.801872 | 7.334322e-49 | -8.615850e-47 |
| Msa0086180 | Msa1176710 | 0.802082 | 6.641151e-49 | -8.615850e-47 |
| Msa0086180 | Msa1181250 | 0.803344 | 3.646704e-49 | -8.615850e-47 |
| Msa0086180 | Msa1181330 | 0.801616 | 8.278821e-49 | -8.615850e-47 |
| Msa0086180 | Msa1209200 | 0.801723 | 7.871681e-49 | -8.615850e-47 |
| Msa0086180 | Msa1209260 | 0.838085 | 3.546297e-57 | -8.615850e-47 |
| Msa0086180 | Msa1209760 | 0.822095 | 2.845801e-53 | -8.615850e-47 |
| Msa0086180 | Msa1210660 | -0.802967 | 4.363815e-49 | -8.615850e-47 |
| Msa0086180 | Msa1224810 | 0.803885 | 2.816084e-49 | -8.615850e-47 |
| Msa0086180 | Msa1237940 | 0.828745 | 7.578325e-55 | -8.615850e-47 |
| Msa0086180 | Msa1260130 | 0.815363 | 9.605023e-52 | -8.615850e-47 |
| Msa0086180 | Msa1265630 | 0.837541 | 4.890723e-57 | -8.615850e-47 |
| Msa0086180 | Msa1294070 | 0.804401 | 2.198887e-49 | -8.615850e-47 |
| Msa0086180 | Msa1300050 | 0.812123 | 4.965770e-51 | -8.615850e-47 |
| Msa0086180 | Msa1355700 | 0.824671 | 7.114292e-54 | -8.615850e-47 |
| Msa0086180 | Msa1356440 | 0.822986 | 1.766174e-53 | -8.615850e-47 |
| Msa0086180 | Msa1358250 | 0.808013 | 3.815437e-50 | -8.615850e-47 |
| Msa0086180 | Msa1359630 | 0.807725 | 4.393564e-50 | -8.615850e-47 |
| Msa0086180 | Msa1388860 | 0.805965 | 1.034567e-49 | -8.615850e-47 |
| Msa0086180 | Msa1394290 | 0.836935 | 6.988839e-57 | -8.615850e-47 |
| Msa0086180 | Msa1400580 | 0.800863 | 1.180164e-48 | -8.615850e-47 |
| Msa0086180 | Msa1403340 | 0.802370 | 5.794960e-49 | -8.615850e-47 |
| Msa0086180 | Msa1419870 | 0.835193 | 1.934486e-56 | -8.615850e-47 |
| Msa0086180 | Msa1436520 | 0.847727 | 9.629845e-60 | -8.615850e-47 |
| Msa0086180 | Msa1444310 | 0.851937 | 6.407342e-61 | -8.615850e-47 |
| Msa0086180 | Msa1457920 | 0.835465 | 1.651763e-56 | -8.615850e-47 |
| Msa0086180 | Msa1465960 | 0.824293 | 8.731128e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086180 | MtrunA17_Chr1g0201701 | 94.565 | 184 | 10 | 0 | 12 | 195 | 1 | 184 | 4.26e-128 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086180 | AT5G09270.1 | 55.789 | 95 | 37 | 2 | 101 | 195 | 19 | 108 | 1.88e-30 | 108 |
| Msa0086180 | AT5G09270.2 | 55.789 | 95 | 37 | 2 | 101 | 195 | 19 | 108 | 1.88e-30 | 108 |
Find 53 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTGCTGCAGGCTTTA+TGG | 0.092653 | 1_2:-66793453 | Msa0086180:CDS |
| CTCTTCTGCTACGGGCTTTA+TGG | 0.095185 | 1_2:-66793624 | Msa0086180:CDS |
| TATATGGCGGATTTGGTCTT+TGG | 0.234560 | 1_2:-66793352 | Msa0086180:CDS |
| ATTCTTGTATATGGCGGATT+TGG | 0.303440 | 1_2:-66793359 | Msa0086180:CDS |
| ATAGATATAGAAAGCTTCTT+AGG | 0.309898 | 1_2:-66793322 | Msa0086180:CDS |
| GGTTCCTATATTCTTGTATA+TGG | 0.337081 | 1_2:-66793368 | Msa0086180:CDS |
| TTCTGCCAAAGTGGTTGAAA+AGG | 0.353945 | 1_2:-66793213 | Msa0086180:CDS |
| CTTGGTCCTCACCAGTTTCC+AGG | 0.356142 | 1_2:+66793486 | None:intergenic |
| TGCAGGCTTTATGGATTCAT+TGG | 0.369416 | 1_2:-66793444 | Msa0086180:CDS |
| CAGAAACTTATCCTTATGTA+TGG | 0.372733 | 1_2:-66793391 | Msa0086180:CDS |
| GGAACACTTAGCCAAGAAAA+TGG | 0.372873 | 1_2:-66793732 | Msa0086180:CDS |
| TGGATAAGTGCTTCAGAACT+TGG | 0.383586 | 1_2:+66793677 | None:intergenic |
| TTATGGATTCATTGGAAAAT+CGG | 0.384322 | 1_2:-66793436 | Msa0086180:CDS |
| TGATTTGCCATGTCCTTGGC+TGG | 0.408407 | 1_2:+66793554 | None:intergenic |
| AAGAAGCTTTCTATATCTAT+AGG | 0.413891 | 1_2:+66793325 | None:intergenic |
| GTCGGTGCCCCTCCTGCTGC+AGG | 0.419080 | 1_2:-66793461 | Msa0086180:CDS |
| CAGGAGGGGCACCGACTACT+TGG | 0.421600 | 1_2:+66793468 | None:intergenic |
| AAGTTCTGCAGCACCTATCC+TGG | 0.422828 | 1_2:-66793504 | Msa0086180:CDS |
| AGGATAGGTGCTGCAGAACT+TGG | 0.446859 | 1_2:+66793506 | None:intergenic |
| AGTCGGTGGCTCTTCTGCTA+CGG | 0.454743 | 1_2:-66793633 | Msa0086180:CDS |
| GCAGCACCTATCCTGGAAAC+TGG | 0.465240 | 1_2:-66793497 | Msa0086180:CDS |
| GAAGCACTTATCCAGAAAAC+TGG | 0.468163 | 1_2:-66793668 | Msa0086180:CDS |
| GTCGGTGGCTCTTCTGCTAC+GGG | 0.474768 | 1_2:-66793632 | Msa0086180:CDS |
| ACAACGTGAGATGGTTGAAA+AGG | 0.483137 | 1_2:-66793267 | Msa0086180:CDS |
| TCCGCCATATACAAGAATAT+AGG | 0.486205 | 1_2:+66793364 | None:intergenic |
| TGGTTGATTTGCCATGTCCT+TGG | 0.486730 | 1_2:+66793550 | None:intergenic |
| AGCTTCTTAGGACAGAGGAC+AGG | 0.494425 | 1_2:-66793310 | Msa0086180:CDS |
| AGAAACTTATCCTTATGTAT+GGG | 0.501079 | 1_2:-66793390 | Msa0086180:CDS |
| TCTGCCAAAGTGGTTGAAAA+GGG | 0.502981 | 1_2:-66793212 | Msa0086180:CDS |
| ATATAGGAACCCCATACATA+AGG | 0.508413 | 1_2:+66793380 | None:intergenic |
| TCCTATATTCTTGTATATGG+CGG | 0.519420 | 1_2:-66793365 | Msa0086180:CDS |
| TTCTAGTAATTCTGCCAAAG+TGG | 0.522258 | 1_2:-66793222 | Msa0086180:CDS |
| ATGTTGCAATGTAGGCTACT+TGG | 0.523428 | 1_2:+66793166 | None:intergenic |
| CATAAAGCCTGCAGCAGGAG+GGG | 0.525453 | 1_2:+66793454 | None:intergenic |
| TCCTCACCAGTTTCCAGGAT+AGG | 0.526596 | 1_2:+66793491 | None:intergenic |
| TCCATAAAGCCTGCAGCAGG+AGG | 0.530529 | 1_2:+66793452 | None:intergenic |
| TTAGGACAGAGGACAGGGTA+CGG | 0.537011 | 1_2:-66793304 | Msa0086180:CDS |
| GAATCCATAAAGCCTGCAGC+AGG | 0.543830 | 1_2:+66793449 | None:intergenic |
| TAGGACAGAGGACAGGGTAC+GGG | 0.558112 | 1_2:-66793303 | Msa0086180:CDS |
| GGAAGGAATCTCAGAAGATG+TGG | 0.565631 | 1_2:+66793187 | None:intergenic |
| GAAACTTATCCTTATGTATG+GGG | 0.570070 | 1_2:-66793389 | Msa0086180:CDS |
| TCAAGCAAGACAACGTGAGA+TGG | 0.594385 | 1_2:-66793276 | Msa0086180:CDS |
| CCATAAAGCCTGCAGCAGGA+GGG | 0.618716 | 1_2:+66793453 | None:intergenic |
| TAGCTGGAACACTCCAGCCA+AGG | 0.621030 | 1_2:-66793567 | Msa0086180:CDS |
| GAACACTCCAGCCAAGGACA+TGG | 0.636957 | 1_2:-66793561 | Msa0086180:CDS |
| GCTTCTTAGGACAGAGGACA+GGG | 0.639564 | 1_2:-66793309 | Msa0086180:CDS |
| ACCTATCCTGGAAACTGGTG+AGG | 0.641675 | 1_2:-66793492 | Msa0086180:CDS |
| TGCAATGTAGGCTACTTGGA+AGG | 0.646398 | 1_2:+66793170 | None:intergenic |
| ACTGGCGAGGATCAAGTAGT+CGG | 0.654403 | 1_2:-66793650 | Msa0086180:CDS |
| TAGAAAGCTTCTTAGGACAG+AGG | 0.663471 | 1_2:-66793315 | Msa0086180:CDS |
| ACTGGTGAGGACCAAGTAGT+CGG | 0.664340 | 1_2:-66793479 | Msa0086180:CDS |
| GGCGAGGATCAAGTAGTCGG+TGG | 0.665719 | 1_2:-66793647 | Msa0086180:CDS |
| ACTTATCCAGAAAACTGGCG+AGG | 0.696112 | 1_2:-66793663 | Msa0086180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTAATAAGCAAA+GGG | + | chr1_2:66793834-66793853 | None:intergenic | 10.0% |
| !!! | TTTATTTTATTAATAAGCAA+AGG | + | chr1_2:66793835-66793854 | None:intergenic | 10.0% |
| !!! | TTTTTATTATCAAATAGATT+AGG | - | chr1_2:66793960-66793979 | Msa0086180:intron | 10.0% |
| !!! | ATGTCATTTATTTATTTATT+TGG | + | chr1_2:66794562-66794581 | None:intergenic | 10.0% |
| !!! | AACATATATTTTTTTTTTTG+GGG | + | chr1_2:66795803-66795822 | None:intergenic | 10.0% |
| !! | ATTTATCATAATTAATATCA+CGG | + | chr1_2:66796041-66796060 | None:intergenic | 10.0% |
| !!! | AAATTTTAGTATTTCATTAT+GGG | - | chr1_2:66796575-66796594 | Msa0086180:intron | 10.0% |
| !! | ATGAAATAAATTAAATTAAG+GGG | + | chr1_2:66796834-66796853 | None:intergenic | 10.0% |
| !! | TATAAATAAAATTATCAAAG+AGG | + | chr1_2:66797709-66797728 | None:intergenic | 10.0% |
| !!! | AAATTTTTATCCAAAATCTT+AGG | - | chr1_2:66793216-66793235 | Msa0086180:CDS | 15.0% |
| !! | ATTTATTAATTATTAACCAC+CGG | + | chr1_2:66793381-66793400 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAGAGAAAATTG+TGG | + | chr1_2:66793450-66793469 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTTACATTTGAT+AGG | - | chr1_2:66793613-66793632 | Msa0086180:CDS | 15.0% |
| !!! | ATAGGACAATTTTTTTTTTT+TGG | - | chr1_2:66793631-66793650 | Msa0086180:CDS | 15.0% |
| !! | AAAAAAAAAAAACAAGAGTT+TGG | - | chr1_2:66793863-66793882 | Msa0086180:intron | 15.0% |
| !! | AAAAAAAAAAACAAGAGTTT+GGG | - | chr1_2:66793864-66793883 | Msa0086180:intron | 15.0% |
| !! | AATATTCTTAATTGGATATT+GGG | + | chr1_2:66794334-66794353 | None:intergenic | 15.0% |
| !! | TCAAACAAATAAAATTTGAT+TGG | + | chr1_2:66794397-66794416 | None:intergenic | 15.0% |
| !!! | AATTTAATTTTTTTTCTGGT+TGG | + | chr1_2:66795009-66795028 | None:intergenic | 15.0% |
| !!! | TTGTTTTAATTAGAGTTTTA+GGG | + | chr1_2:66795051-66795070 | None:intergenic | 15.0% |
| !! | TAAAACGAAAAAACAAAAAA+CGG | - | chr1_2:66795157-66795176 | Msa0086180:intron | 15.0% |
| !! | TTGATATTTCACATAATTTA+GGG | - | chr1_2:66795609-66795628 | Msa0086180:intron | 15.0% |
| !!! | ACATATATTTTTTTTTTTGG+GGG | + | chr1_2:66795802-66795821 | None:intergenic | 15.0% |
| !!! | TTATACTATGAACAAATTTT+TGG | - | chr1_2:66796199-66796218 | Msa0086180:intron | 15.0% |
| !!! | TATACTATGAACAAATTTTT+GGG | - | chr1_2:66796200-66796219 | Msa0086180:intron | 15.0% |
| !! | TAATTAGTTAGAATTGAAAT+TGG | - | chr1_2:66796392-66796411 | Msa0086180:intron | 15.0% |
| !! | ATTTGTATCAAATTATAAGT+CGG | + | chr1_2:66796559-66796578 | None:intergenic | 15.0% |
| !!! | CAAATTTTAGTATTTCATTA+TGG | - | chr1_2:66796574-66796593 | Msa0086180:intron | 15.0% |
| !! | TGAAATAAATTAAATTAAGG+GGG | + | chr1_2:66796833-66796852 | None:intergenic | 15.0% |
| !!! | ATTTTTTAAGAGTAATACAA+TGG | - | chr1_2:66797483-66797502 | Msa0086180:intron | 15.0% |
| !!! | TATAATATTTTAGTTAGTAC+TGG | - | chr1_2:66797725-66797744 | Msa0086180:intron | 15.0% |
| !!! | TTCATTTTATTTTGACTATA+TGG | + | chr1_2:66798384-66798403 | None:intergenic | 15.0% |
| !! | TAATTAAATGTATCATATGT+TGG | - | chr1_2:66798416-66798435 | Msa0086180:intron | 15.0% |
| !!! | TCTCAAAATTTGAAGTTATT+TGG | + | chr1_2:66793505-66793524 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTACATTTGAT+AGG | - | chr1_2:66793645-66793664 | Msa0086180:CDS | 20.0% |
| !! | ATAGGAATAATCTTATATCA+AGG | - | chr1_2:66793663-66793682 | Msa0086180:CDS | 20.0% |
| !! | AGAATATTGTTTACTCTAAT+TGG | - | chr1_2:66793719-66793738 | Msa0086180:CDS | 20.0% |
| !! | ATACATTTAATACAAGAATG+TGG | + | chr1_2:66793754-66793773 | None:intergenic | 20.0% |
| !! | TTTGAACTAAGTTATTGTAT+TGG | - | chr1_2:66793773-66793792 | Msa0086180:intron | 20.0% |
| !!! | TTTTATCAACTTGAGTATAA+TGG | + | chr1_2:66793809-66793828 | None:intergenic | 20.0% |
| !! | GAATATTCTTAATTGGATAT+TGG | + | chr1_2:66794335-66794354 | None:intergenic | 20.0% |
| !! | AACTTGAGAATATTCTTAAT+TGG | + | chr1_2:66794342-66794361 | None:intergenic | 20.0% |
| !! | AATTTGATTGGACAAAATAA+AGG | + | chr1_2:66794385-66794404 | None:intergenic | 20.0% |
| !!! | CAAATTTTATTTGTTTGAGT+TGG | - | chr1_2:66794399-66794418 | Msa0086180:intron | 20.0% |
| !! | CAAAAAAAAATCAAATTGGT+TGG | + | chr1_2:66794459-66794478 | None:intergenic | 20.0% |
| !! | TGCTCAAAAAAAAATCAAAT+TGG | + | chr1_2:66794463-66794482 | None:intergenic | 20.0% |
| !! | ATAGATAGAGAAATAATTCA+GGG | + | chr1_2:66794786-66794805 | None:intergenic | 20.0% |
| !! | ATATCTGATTAAACAATTCA+GGG | + | chr1_2:66794851-66794870 | None:intergenic | 20.0% |
| !!! | GTTGTTTTAATTAGAGTTTT+AGG | + | chr1_2:66795052-66795071 | None:intergenic | 20.0% |
| !! | GTTGATATTTCACATAATTT+AGG | - | chr1_2:66795608-66795627 | Msa0086180:intron | 20.0% |
| !!! | TAGAATTGAAATTGGAATTT+TGG | - | chr1_2:66796313-66796332 | Msa0086180:intron | 20.0% |
| !!! | TTAGTTTTTAGTTACTGAAT+TGG | - | chr1_2:66796340-66796359 | Msa0086180:intron | 20.0% |
| !! | TAGAATTGAAATTGGAATTT+CGG | - | chr1_2:66796313-66796332 | Msa0086180:intron | 20.0% |
| !! | GGAAAGTAATTATAGTTATT+TGG | + | chr1_2:66796638-66796657 | None:intergenic | 20.0% |
| !! | AAATAAATTAAATTAAGGGG+GGG | + | chr1_2:66796831-66796850 | None:intergenic | 20.0% |
| !! | GAAATAAATTAAATTAAGGG+GGG | + | chr1_2:66796832-66796851 | None:intergenic | 20.0% |
| !!! | AATACAAGTTTTCAATTTGT+AGG | + | chr1_2:66797052-66797071 | None:intergenic | 20.0% |
| !! | GTGAAAAATTAATTGATCTA+CGG | - | chr1_2:66797379-66797398 | Msa0086180:intron | 20.0% |
| !! | ATATCCACTATACATTTATA+GGG | + | chr1_2:66798155-66798174 | None:intergenic | 20.0% |
| !! | AATATCCACTATACATTTAT+AGG | + | chr1_2:66798156-66798175 | None:intergenic | 20.0% |
| !! | GGCTTATAATAATATACATA+TGG | - | chr1_2:66798443-66798462 | Msa0086180:intron | 20.0% |
| !!! | TGCAGTTTTTCTTTAATTAT+CGG | - | chr1_2:66798594-66798613 | Msa0086180:intron | 20.0% |
| !! | TTATGGATTCATTGAAAAAT+CGG | - | chr1_2:66798747-66798766 | Msa0086180:intron | 20.0% |
| ! | TCTTTGTTCATTGATAAAGA+AGG | - | chr1_2:66793686-66793705 | Msa0086180:CDS | 25.0% |
| ! | ATATTGTTTACTCTAATTGG+TGG | - | chr1_2:66793722-66793741 | Msa0086180:CDS | 25.0% |
| !!! | AAATCTGTTTTTGAGATGAT+TGG | - | chr1_2:66793931-66793950 | Msa0086180:intron | 25.0% |
| ! | ATCAAATAGATTAGGTTTAG+TGG | - | chr1_2:66793968-66793987 | Msa0086180:intron | 25.0% |
| !! | CATCCATCTATTAAGATTTT+AGG | - | chr1_2:66794124-66794143 | Msa0086180:intron | 25.0% |
| ! | TAGCCTAAAATCTTAATAGA+TGG | + | chr1_2:66794130-66794149 | None:intergenic | 25.0% |
| ! | TTCATTAGAACTTTACTAGA+GGG | + | chr1_2:66794702-66794721 | None:intergenic | 25.0% |
| ! | TTTCATTAGAACTTTACTAG+AGG | + | chr1_2:66794703-66794722 | None:intergenic | 25.0% |
| !! | AGTAAAGTTCTAATGAAAAG+AGG | - | chr1_2:66794705-66794724 | Msa0086180:intron | 25.0% |
| ! | GATAGATAGAGAAATAATTC+AGG | + | chr1_2:66794787-66794806 | None:intergenic | 25.0% |
| ! | GATATCTGATTAAACAATTC+AGG | + | chr1_2:66794852-66794871 | None:intergenic | 25.0% |
| ! | ATTACATATGCAAAAGTCAT+AGG | - | chr1_2:66794943-66794962 | Msa0086180:intron | 25.0% |
| !!! | AATTAGAGTTTTAGGGTTTT+GGG | + | chr1_2:66795044-66795063 | None:intergenic | 25.0% |
| !!! | TAATTAGAGTTTTAGGGTTT+TGG | + | chr1_2:66795045-66795064 | None:intergenic | 25.0% |
| ! | ACAAAAAACGGACAAAAAAA+TGG | - | chr1_2:66795169-66795188 | Msa0086180:intron | 25.0% |
| ! | ACAAAAACTTGATAAACTAG+AGG | - | chr1_2:66795203-66795222 | Msa0086180:intron | 25.0% |
| ! | TAAAACTGAAAAGTGAAAAC+TGG | - | chr1_2:66795425-66795444 | Msa0086180:intron | 25.0% |
| ! | TATTTCACATAATTTAGGGA+CGG | - | chr1_2:66795613-66795632 | Msa0086180:intron | 25.0% |
| ! | AAATTCATCCATGAATTTCA+CGG | + | chr1_2:66795650-66795669 | None:intergenic | 25.0% |
| ! | AAATTCATGGATGAATTTGA+TGG | - | chr1_2:66795652-66795671 | Msa0086180:intron | 25.0% |
| !! | TTTTGTTCTTTTAGCGTTTA+GGG | + | chr1_2:66795829-66795848 | None:intergenic | 25.0% |
| !!! | AATTGCTTGTTTTAGGTTTA+GGG | - | chr1_2:66795973-66795992 | Msa0086180:intron | 25.0% |
| !!! | AGGTTTAGGGTTTTAAAATT+CGG | - | chr1_2:66795986-66796005 | Msa0086180:intron | 25.0% |
| ! | CACTAGTAAATGTTCAAATT+TGG | + | chr1_2:66796067-66796086 | None:intergenic | 25.0% |
| !!! | ATGAACAAATTTTTGGGAAT+TGG | - | chr1_2:66796206-66796225 | Msa0086180:intron | 25.0% |
| !!! | TGAACAAATTTTTGGGAATT+GGG | - | chr1_2:66796207-66796226 | Msa0086180:intron | 25.0% |
| !!! | AAATTTTGTTTGTCATGAAC+AGG | - | chr1_2:66796235-66796254 | Msa0086180:intron | 25.0% |
| !!! | GTTATGAACACTTTTTTTGT+TGG | - | chr1_2:66796289-66796308 | Msa0086180:intron | 25.0% |
| !! | TTGTTGGTTAGAATTGAAAT+TGG | - | chr1_2:66796305-66796324 | Msa0086180:intron | 25.0% |
| ! | ATGCATTAACTACATAGAAT+TGG | - | chr1_2:66796364-66796383 | Msa0086180:intron | 25.0% |
| ! | TTAGTATTTCATTATGGGAA+TGG | - | chr1_2:66796580-66796599 | Msa0086180:intron | 25.0% |
| ! | TAGTATTTCATTATGGGAAT+GGG | - | chr1_2:66796581-66796600 | Msa0086180:intron | 25.0% |
| ! | TCAATTTGTAGGTTTAAGTA+GGG | + | chr1_2:66797041-66797060 | None:intergenic | 25.0% |
| ! | TTCAATTTGTAGGTTTAAGT+AGG | + | chr1_2:66797042-66797061 | None:intergenic | 25.0% |
| !!! | TTTTGTTGGTTAAATGTGTT+TGG | - | chr1_2:66797174-66797193 | Msa0086180:intron | 25.0% |
| !! | TTTGTTGGTTAAATGTGTTT+GGG | - | chr1_2:66797175-66797194 | Msa0086180:intron | 25.0% |
| !!! | GGATTCAGTGTTATTTAAAT+TGG | - | chr1_2:66797357-66797376 | Msa0086180:intron | 25.0% |
| ! | AAATTAATTGATCTACGGTT+TGG | - | chr1_2:66797384-66797403 | Msa0086180:intron | 25.0% |
| !!! | TTTGGTGCTTAAAAATTGAT+CGG | - | chr1_2:66797402-66797421 | Msa0086180:intron | 25.0% |
| !! | AAATTGATGCATTTTGTAAG+AGG | - | chr1_2:66797518-66797537 | Msa0086180:intron | 25.0% |
| ! | TATACAATTTGCATCTTTGT+TGG | + | chr1_2:66797551-66797570 | None:intergenic | 25.0% |
| !!! | TTTTTCGAATATTGCAAGTT+TGG | + | chr1_2:66797633-66797652 | None:intergenic | 25.0% |
| ! | AATATTCGAAAAAGTCACAA+TGG | - | chr1_2:66797640-66797659 | Msa0086180:intron | 25.0% |
| !!! | ATTATCAAAGAGGCATTTTT+CGG | + | chr1_2:66797699-66797718 | None:intergenic | 25.0% |
| ! | TTAGTACTATGTAAACATTC+AGG | - | chr1_2:66797797-66797816 | Msa0086180:intron | 25.0% |
| !!! | ATATTTTGTCTGTGTTTTGA+TGG | - | chr1_2:66798027-66798046 | Msa0086180:intron | 25.0% |
| !!! | AGTTGTTTCTATAATATGCT+TGG | - | chr1_2:66798070-66798089 | Msa0086180:intron | 25.0% |
| !!! | GTTGTTTCTATAATATGCTT+GGG | - | chr1_2:66798071-66798090 | Msa0086180:intron | 25.0% |
| !!! | CTTTAAAGTTTATTAGCATG+TGG | - | chr1_2:66798116-66798135 | Msa0086180:intron | 25.0% |
| ! | CATCAAGAAAATGGATAAAT+TGG | + | chr1_2:66798252-66798271 | None:intergenic | 25.0% |
| !! | CAATTTATCCATTTTCTTGA+TGG | - | chr1_2:66798250-66798269 | Msa0086180:intron | 25.0% |
| !!! | AGAAGTTTGTTATATGATGA+GGG | + | chr1_2:66798327-66798346 | None:intergenic | 25.0% |
| !!! | TAGAAGTTTGTTATATGATG+AGG | + | chr1_2:66798328-66798347 | None:intergenic | 25.0% |
| !!! | TTATTTTGACTATATGGTGA+AGG | + | chr1_2:66798378-66798397 | None:intergenic | 25.0% |
| ! | ATCAAAAAATCATAGATAGC+TGG | - | chr1_2:66798771-66798790 | Msa0086180:intron | 25.0% |
| ! | TTATGGATTCATTGGAAAAT+CGG | - | chr1_2:66798918-66798937 | Msa0086180:intron | 25.0% |
| ! | AGAAACTTATCCTTATGTAT+GGG | - | chr1_2:66798964-66798983 | Msa0086180:intron | 25.0% |
| ! | AAGAAGCTTTCTATATCTAT+AGG | + | chr1_2:66799032-66799051 | None:intergenic | 25.0% |
| ! | ATAGATATAGAAAGCTTCTT+AGG | - | chr1_2:66799032-66799051 | Msa0086180:intron | 25.0% |
| ATGTAACACATATACCTCTT+AGG | - | chr1_2:66793250-66793269 | Msa0086180:CDS | 30.0% | |
| ACTATGAAAGAACATACACT+TGG | + | chr1_2:66793318-66793337 | None:intergenic | 30.0% | |
| ATATTGCAGAAGTGATTGAT+AGG | - | chr1_2:66793581-66793600 | Msa0086180:CDS | 30.0% | |
| GAAATCTATGAGAAAAAGTG+TGG | - | chr1_2:66794083-66794102 | Msa0086180:intron | 30.0% | |
| AAAACGAATGCAATCAACAA+GGG | + | chr1_2:66794259-66794278 | None:intergenic | 30.0% | |
| AAAAACGAATGCAATCAACA+AGG | + | chr1_2:66794260-66794279 | None:intergenic | 30.0% | |
| AACATACTTCTATGTTCAGT+GGG | - | chr1_2:66794291-66794310 | Msa0086180:intron | 30.0% | |
| !!! | TCTCAAGTTGAGTTAAGTTT+TGG | - | chr1_2:66794353-66794372 | Msa0086180:intron | 30.0% |
| TAATTCAGGGACTAATTTGA+TGG | + | chr1_2:66794773-66794792 | None:intergenic | 30.0% | |
| !!! | CAATTCAGGGACTTATTTTA+TGG | + | chr1_2:66794838-66794857 | None:intergenic | 30.0% |
| AACTTGATAAACTAGAGGAA+AGG | - | chr1_2:66795208-66795227 | Msa0086180:intron | 30.0% | |
| ! | TTTTCCACTATCCATCAAAT+TGG | - | chr1_2:66795451-66795470 | Msa0086180:intron | 30.0% |
| TTGTCAAACATCCATCAAAA+AGG | + | chr1_2:66795575-66795594 | None:intergenic | 30.0% | |
| !! | GTTTTGTTCTTTTAGCGTTT+AGG | + | chr1_2:66795830-66795849 | None:intergenic | 30.0% |
| CTAAACCTAAAACAAGCAAT+TGG | + | chr1_2:66795974-66795993 | None:intergenic | 30.0% | |
| !!! | CAATTGCTTGTTTTAGGTTT+AGG | - | chr1_2:66795972-66795991 | Msa0086180:intron | 30.0% |
| !!! | AGGGTTTTAAAATTCGGAAT+TGG | - | chr1_2:66795992-66796011 | Msa0086180:intron | 30.0% |
| TCGATTAGATGAATTATGCT+TGG | - | chr1_2:66796108-66796127 | Msa0086180:intron | 30.0% | |
| TAGATGAATTATGCTTGGTT+TGG | - | chr1_2:66796113-66796132 | Msa0086180:intron | 30.0% | |
| !! | TTATGCTTGGTTTGGTTAAT+TGG | - | chr1_2:66796121-66796140 | Msa0086180:intron | 30.0% |
| !!! | TTAATTGGTTTTGTGCATTG+TGG | - | chr1_2:66796136-66796155 | Msa0086180:intron | 30.0% |
| ACTTGAGAAACCTTAAAACA+GGG | + | chr1_2:66796885-66796904 | None:intergenic | 30.0% | |
| GTATGAAAATGAAGAGTGAA+GGG | + | chr1_2:66796981-66797000 | None:intergenic | 30.0% | |
| AGTATGAAAATGAAGAGTGA+AGG | + | chr1_2:66796982-66797001 | None:intergenic | 30.0% | |
| ! | CTCTTCATTTTCATACTTTC+AGG | - | chr1_2:66796985-66797004 | Msa0086180:intron | 30.0% |
| ACTAAAAGACACCAAATAGT+CGG | + | chr1_2:66797216-66797235 | None:intergenic | 30.0% | |
| !!! | ACTATTTGGTGTCTTTTAGT+TGG | - | chr1_2:66797216-66797235 | Msa0086180:intron | 30.0% |
| !!! | TGAGGTGTTATTTTTTTCTG+CGG | - | chr1_2:66797281-66797300 | Msa0086180:intron | 30.0% |
| !!! | TTATCAAAGAGGCATTTTTC+GGG | + | chr1_2:66797698-66797717 | None:intergenic | 30.0% |
| ATAGTACTAACAGAGACATT+GGG | + | chr1_2:66797787-66797806 | None:intergenic | 30.0% | |
| ! | AGCAACAGAATTGCAATTTT+TGG | + | chr1_2:66797867-66797886 | None:intergenic | 30.0% |
| !! | TGCTTAGTTTTCTTTTTGCT+TGG | - | chr1_2:66797883-66797902 | Msa0086180:intron | 30.0% |
| !! | TTAGTTTTCTTTTTGCTTGG+TGG | - | chr1_2:66797886-66797905 | Msa0086180:intron | 30.0% |
| ! | TAGTTTTCTTTTTGCTTGGT+GGG | - | chr1_2:66797887-66797906 | Msa0086180:intron | 30.0% |
| TGAACCCTATAAATGTATAG+TGG | - | chr1_2:66798148-66798167 | Msa0086180:intron | 30.0% | |
| TCAATGAACCATCAAGAAAA+TGG | + | chr1_2:66798261-66798280 | None:intergenic | 30.0% | |
| !! | TTTTCTTGATGGTTCATTGA+TGG | - | chr1_2:66798261-66798280 | Msa0086180:intron | 30.0% |
| ! | TTTCTTGATGGTTCATTGAT+GGG | - | chr1_2:66798262-66798281 | Msa0086180:intron | 30.0% |
| AAATCAAGTATCACGTTGAT+AGG | - | chr1_2:66798294-66798313 | Msa0086180:intron | 30.0% | |
| AATCAAGTATCACGTTGATA+GGG | - | chr1_2:66798295-66798314 | Msa0086180:intron | 30.0% | |
| AATGTATCATATGTTGGACT+TGG | - | chr1_2:66798422-66798441 | Msa0086180:intron | 30.0% | |
| CTTTGATGCTGTTGTATATA+AGG | - | chr1_2:66798510-66798529 | Msa0086180:intron | 30.0% | |
| TTTCTTTAATTATCGGTAGC+TGG | - | chr1_2:66798601-66798620 | Msa0086180:intron | 30.0% | |
| !!! | GCTTGTTGCTTTTCATTATT+TGG | + | chr1_2:66798827-66798846 | None:intergenic | 30.0% |
| CAGAAACTTATCCTTATGTA+TGG | - | chr1_2:66798963-66798982 | Msa0086180:intron | 30.0% | |
| GAAACTTATCCTTATGTATG+GGG | - | chr1_2:66798965-66798984 | Msa0086180:intron | 30.0% | |
| GGTTCCTATATTCTTGTATA+TGG | - | chr1_2:66798986-66799005 | Msa0086180:intron | 30.0% | |
| TCCTATATTCTTGTATATGG+CGG | - | chr1_2:66798989-66799008 | Msa0086180:intron | 30.0% | |
| ! | ATGTGACACACCTAAGATTT+TGG | + | chr1_2:66793229-66793248 | None:intergenic | 35.0% |
| ACCTCTTAGGATATACAAGA+CGG | - | chr1_2:66793263-66793282 | Msa0086180:CDS | 35.0% | |
| ATGTTCTTTCATAGTTGACG+TGG | - | chr1_2:66793323-66793342 | Msa0086180:CDS | 35.0% | |
| TGTTCTTTCATAGTTGACGT+GGG | - | chr1_2:66793324-66793343 | Msa0086180:CDS | 35.0% | |
| ATTCGCCACATTCACATTTA+TGG | + | chr1_2:66793563-66793582 | None:intergenic | 35.0% | |
| GAAGTTAAACTATTGCAGCA+TGG | - | chr1_2:66793993-66794012 | Msa0086180:intron | 35.0% | |
| ATCTTATTCAAGACACCCAT+AGG | + | chr1_2:66794048-66794067 | None:intergenic | 35.0% | |
| CAACATACTTCTATGTTCAG+TGG | - | chr1_2:66794290-66794309 | Msa0086180:intron | 35.0% | |
| !! | CAACTCAATTTGATGATGAG+CGG | - | chr1_2:66794484-66794503 | Msa0086180:intron | 35.0% |
| TCAATTGAGTTAAGCGACAA+TGG | + | chr1_2:66794608-66794627 | None:intergenic | 35.0% | |
| GACAATGCATAAAATCTGCA+AGG | - | chr1_2:66794632-66794651 | Msa0086180:intron | 35.0% | |
| AAAGAGGTTGAAGATGATTG+AGG | - | chr1_2:66794721-66794740 | Msa0086180:intron | 35.0% | |
| CAGTTTCAATTTGTGTGTTC+TGG | + | chr1_2:66794919-66794938 | None:intergenic | 35.0% | |
| !! | AGATGATGATGATTTTGGAG+AGG | - | chr1_2:66795285-66795304 | Msa0086180:intron | 35.0% |
| !! | ATGGAGAAAGTTTTAGCAGA+AGG | - | chr1_2:66795313-66795332 | Msa0086180:intron | 35.0% |
| ! | ATGTTTCTGAGAGAAATGTG+AGG | - | chr1_2:66795358-66795377 | Msa0086180:intron | 35.0% |
| GTATTCAAGGACCAATTTGA+TGG | + | chr1_2:66795465-66795484 | None:intergenic | 35.0% | |
| GTATTGTACATGTGGCAAAA+AGG | + | chr1_2:66795495-66795514 | None:intergenic | 35.0% | |
| ! | ACATAATTTAGGGACGGATT+TGG | - | chr1_2:66795619-66795638 | Msa0086180:intron | 35.0% |
| TTCAATGGTTTAGATGTCGA+CGG | + | chr1_2:66795680-66795699 | None:intergenic | 35.0% | |
| GACATCTAAACCATTGAAAG+AGG | - | chr1_2:66795682-66795701 | Msa0086180:intron | 35.0% | |
| ACGTGGCAAATAATATGACT+TGG | - | chr1_2:66795707-66795726 | Msa0086180:intron | 35.0% | |
| ! | TGGCAAATAATATGACTTGG+TGG | - | chr1_2:66795710-66795729 | Msa0086180:intron | 35.0% |
| !! | GGCAAATAATATGACTTGGT+GGG | - | chr1_2:66795711-66795730 | Msa0086180:intron | 35.0% |
| ACGCTAAAAGAACAAAACTG+AGG | - | chr1_2:66795832-66795851 | Msa0086180:intron | 35.0% | |
| !! | ACTCTCCAATTGCTTGTTTT+AGG | - | chr1_2:66795966-66795985 | Msa0086180:intron | 35.0% |
| CTAGACATTTAGTCTATGTG+TGG | + | chr1_2:66796450-66796469 | None:intergenic | 35.0% | |
| !! | AAGTCTATTTTGGGTGGAAT+TGG | - | chr1_2:66796482-66796501 | Msa0086180:intron | 35.0% |
| TTTCATTATGGGAATGGGAA+TGG | - | chr1_2:66796586-66796605 | Msa0086180:intron | 35.0% | |
| TTCATTATGGGAATGGGAAT+GGG | - | chr1_2:66796587-66796606 | Msa0086180:intron | 35.0% | |
| ATTACATCAGCCATTGTTCT+CGG | - | chr1_2:66796726-66796745 | Msa0086180:intron | 35.0% | |
| ! | ATGTGTTATTCCGAGAACAA+TGG | + | chr1_2:66796739-66796758 | None:intergenic | 35.0% |
| CTGAATGGAGAAAGAGAATA+GGG | + | chr1_2:66796765-66796784 | None:intergenic | 35.0% | |
| CTATTCTCTTTCTCCATTCA+GGG | - | chr1_2:66796764-66796783 | Msa0086180:intron | 35.0% | |
| ! | ACACAAATACCCCTGTTTTA+AGG | - | chr1_2:66796872-66796891 | Msa0086180:intron | 35.0% |
| CTTGAGAAACCTTAAAACAG+GGG | + | chr1_2:66796884-66796903 | None:intergenic | 35.0% | |
| GACTTGAGAAACCTTAAAAC+AGG | + | chr1_2:66796886-66796905 | None:intergenic | 35.0% | |
| ACAGACACTCTGTAAATGTA+GGG | + | chr1_2:66797122-66797141 | None:intergenic | 35.0% | |
| TACAGACACTCTGTAAATGT+AGG | + | chr1_2:66797123-66797142 | None:intergenic | 35.0% | |
| ! | TACATTTACAGAGTGTCTGT+AGG | - | chr1_2:66797122-66797141 | Msa0086180:intron | 35.0% |
| ! | ACATTTACAGAGTGTCTGTA+GGG | - | chr1_2:66797123-66797142 | Msa0086180:intron | 35.0% |
| TAGGGTTTATAAGTGGTTTG+CGG | - | chr1_2:66797141-66797160 | Msa0086180:intron | 35.0% | |
| !! | TTATAAGTGGTTTGCGGTTT+TGG | - | chr1_2:66797147-66797166 | Msa0086180:intron | 35.0% |
| AAATAGTCGGACACTTAGTT+AGG | + | chr1_2:66797203-66797222 | None:intergenic | 35.0% | |
| TAACTAAGTGTCCGACTATT+TGG | - | chr1_2:66797202-66797221 | Msa0086180:intron | 35.0% | |
| !!! | AGTTGGCTGAATGTGTTTTT+TGG | - | chr1_2:66797233-66797252 | Msa0086180:intron | 35.0% |
| !!! | TGTGTTTTTTGGTCAGTATC+AGG | - | chr1_2:66797244-66797263 | Msa0086180:intron | 35.0% |
| !!! | GAGGTGTTATTTTTTTCTGC+GGG | - | chr1_2:66797282-66797301 | Msa0086180:intron | 35.0% |
| !!! | AGGTGTTATTTTTTTCTGCG+GGG | - | chr1_2:66797283-66797302 | Msa0086180:intron | 35.0% |
| GAACTCAATGTTTACTGTTG+TGG | - | chr1_2:66797336-66797355 | Msa0086180:intron | 35.0% | |
| !! | CTTCAACATTGACTCTTGAA+AGG | - | chr1_2:66797572-66797591 | Msa0086180:intron | 35.0% |
| ACTCTTGAAAGGAATCCTTT+CGG | - | chr1_2:66797583-66797602 | Msa0086180:intron | 35.0% | |
| !!! | TATCAAAGAGGCATTTTTCG+GGG | + | chr1_2:66797697-66797716 | None:intergenic | 35.0% |
| CATAGTACTAACAGAGACAT+TGG | + | chr1_2:66797788-66797807 | None:intergenic | 35.0% | |
| GCATTACAGATAATCTGCAA+TGG | + | chr1_2:66798184-66798203 | None:intergenic | 35.0% | |
| ACAGTAAACAGTAAGTGAGA+AGG | + | chr1_2:66798227-66798246 | None:intergenic | 35.0% | |
| ! | GGTAGAGTAAATTTTGTGCA+TGG | + | chr1_2:66798357-66798376 | None:intergenic | 35.0% |
| !!! | TGGTTGATTTGCCATTTTCT+TGG | + | chr1_2:66798636-66798655 | None:intergenic | 35.0% |
| !!! | GCTTGCTGCTTTTCATTATT+TGG | + | chr1_2:66798656-66798675 | None:intergenic | 35.0% |
| ATATAGGAACCCCATACATA+AGG | + | chr1_2:66798977-66798996 | None:intergenic | 35.0% | |
| TCCGCCATATACAAGAATAT+AGG | + | chr1_2:66798993-66799012 | None:intergenic | 35.0% | |
| !! | ATTCTTGTATATGGCGGATT+TGG | - | chr1_2:66798995-66799014 | Msa0086180:intron | 35.0% |
| TTCTAGTAATTCTGCCAAAG+TGG | - | chr1_2:66799132-66799151 | Msa0086180:intron | 35.0% | |
| TCCGTCTTGTATATCCTAAG+AGG | + | chr1_2:66793267-66793286 | None:intergenic | 40.0% | |
| CAATTAAAACCAACGCACAC+CGG | - | chr1_2:66793359-66793378 | Msa0086180:CDS | 40.0% | |
| CACAGCCATAAATGTGAATG+TGG | - | chr1_2:66793555-66793574 | Msa0086180:CDS | 40.0% | |
| TCCATGACTTGATGTCCTAT+GGG | - | chr1_2:66794030-66794049 | Msa0086180:intron | 40.0% | |
| GGATGAACTCCAACTTGTAT+CGG | + | chr1_2:66794109-66794128 | None:intergenic | 40.0% | |
| ! | TGTCGCTTAACTCAATTGAC+AGG | - | chr1_2:66794609-66794628 | Msa0086180:intron | 40.0% |
| GTCGCTTAACTCAATTGACA+GGG | - | chr1_2:66794610-66794629 | Msa0086180:intron | 40.0% | |
| GCATAAAATCTGCAAGGTTG+AGG | - | chr1_2:66794638-66794657 | Msa0086180:intron | 40.0% | |
| CAAACATAGAATGACCTTCC+TGG | + | chr1_2:66794679-66794698 | None:intergenic | 40.0% | |
| TTGTGTTCAGCTGTGGTTAA+AGG | + | chr1_2:66795239-66795258 | None:intergenic | 40.0% | |
| ! | GAAGTTTTTGTGTTCAGCTG+TGG | + | chr1_2:66795246-66795265 | None:intergenic | 40.0% |
| !! | CGCAGAGATGATGATGATTT+TGG | - | chr1_2:66795280-66795299 | Msa0086180:intron | 40.0% |
| !! | TGATTTTGGAGAGGTGAGAA+TGG | - | chr1_2:66795294-66795313 | Msa0086180:intron | 40.0% |
| ! | TTCTGAGAGAAATGTGAGGA+AGG | - | chr1_2:66795362-66795381 | Msa0086180:intron | 40.0% |
| TCTGAGAGAAATGTGAGGAA+GGG | - | chr1_2:66795363-66795382 | Msa0086180:intron | 40.0% | |
| ! | AAATGTGAGGAAGGGTGTAT+GGG | - | chr1_2:66795371-66795390 | Msa0086180:intron | 40.0% |
| ! | AAGGGTGTATGGGTAATACA+GGG | - | chr1_2:66795381-66795400 | Msa0086180:intron | 40.0% |
| ! | AGGACCAATTTGATGGATAG+TGG | + | chr1_2:66795458-66795477 | None:intergenic | 40.0% |
| CAAATTGGTCCTTGAATACG+TGG | - | chr1_2:66795466-66795485 | Msa0086180:intron | 40.0% | |
| AAAAGGAAGCCACGTATTCA+AGG | + | chr1_2:66795478-66795497 | None:intergenic | 40.0% | |
| GCTGTGTTGTATTGTACATG+TGG | + | chr1_2:66795503-66795522 | None:intergenic | 40.0% | |
| TACAATACAACACAGCATGC+AGG | - | chr1_2:66795507-66795526 | Msa0086180:intron | 40.0% | |
| ACAATACAACACAGCATGCA+GGG | - | chr1_2:66795508-66795527 | Msa0086180:intron | 40.0% | |
| ACACAGTCTCATTCACTCTA+AGG | - | chr1_2:66795932-66795951 | Msa0086180:intron | 40.0% | |
| CAAGCAATTGGAGAGTCAAT+TGG | + | chr1_2:66795962-66795981 | None:intergenic | 40.0% | |
| CACCCAAAATAGACTTACAG+GGG | + | chr1_2:66796478-66796497 | None:intergenic | 40.0% | |
| CCACCCAAAATAGACTTACA+GGG | + | chr1_2:66796479-66796498 | None:intergenic | 40.0% | |
| TCCACCCAAAATAGACTTAC+AGG | + | chr1_2:66796480-66796499 | None:intergenic | 40.0% | |
| TCACCTGAAATCATGAGTTG+AGG | - | chr1_2:66796511-66796530 | Msa0086180:intron | 40.0% | |
| ! | CACCTGAAATCATGAGTTGA+GGG | - | chr1_2:66796512-66796531 | Msa0086180:intron | 40.0% |
| ATCCCTCAACTCATGATTTC+AGG | + | chr1_2:66796517-66796536 | None:intergenic | 40.0% | |
| ! | ATGAGTTGAGGGATGAGTTA+CGG | - | chr1_2:66796523-66796542 | Msa0086180:intron | 40.0% |
| TGACTTATGCAGCAATTTCG+AGG | + | chr1_2:66796659-66796678 | None:intergenic | 40.0% | |
| GCATAAGTCAAAGCTTCATC+TGG | - | chr1_2:66796669-66796688 | Msa0086180:intron | 40.0% | |
| ATGTAATCCAGAGAACAAGG+TGG | + | chr1_2:66796713-66796732 | None:intergenic | 40.0% | |
| CTGATGTAATCCAGAGAACA+AGG | + | chr1_2:66796716-66796735 | None:intergenic | 40.0% | |
| CCTGAATGGAGAAAGAGAAT+AGG | + | chr1_2:66796766-66796785 | None:intergenic | 40.0% | |
| CCTATTCTCTTTCTCCATTC+AGG | - | chr1_2:66796763-66796782 | Msa0086180:intron | 40.0% | |
| GTGTCTGTAGGGTTTATAAG+TGG | - | chr1_2:66797134-66797153 | Msa0086180:intron | 40.0% | |
| !! | TTTTTGGTCAGTATCAGGTG+TGG | - | chr1_2:66797249-66797268 | Msa0086180:intron | 40.0% |
| ATTGATCGGTTAACAGTCAG+TGG | - | chr1_2:66797416-66797435 | Msa0086180:intron | 40.0% | |
| TGAACTGTTTGATCACCGAA+AGG | + | chr1_2:66797601-66797620 | None:intergenic | 40.0% | |
| ACTAAGAGCAAGGTCAAACT+TGG | + | chr1_2:66797764-66797783 | None:intergenic | 40.0% | |
| TCAGAACAGGAAAACAGAGA+GGG | + | chr1_2:66797837-66797856 | None:intergenic | 40.0% | |
| ATCAGAACAGGAAAACAGAG+AGG | + | chr1_2:66797838-66797857 | None:intergenic | 40.0% | |
| ! | TCTGTTTTCCTGTTCTGATC+AGG | - | chr1_2:66797839-66797858 | Msa0086180:intron | 40.0% |
| ! | CTGTTTTCCTGTTCTGATCA+GGG | - | chr1_2:66797840-66797859 | Msa0086180:intron | 40.0% |
| GGAACACTTAGCCAAGAAAA+TGG | - | chr1_2:66798622-66798641 | Msa0086180:intron | 40.0% | |
| TGGATAAGTGCTTCAGAACT+TGG | + | chr1_2:66798680-66798699 | None:intergenic | 40.0% | |
| ! | GAAGCACTTATCCAGAAAAC+TGG | - | chr1_2:66798686-66798705 | Msa0086180:intron | 40.0% |
| ! | TGCAGGCTTTATGGATTCAT+TGG | - | chr1_2:66798910-66798929 | Msa0086180:intron | 40.0% |
| !! | TATATGGCGGATTTGGTCTT+TGG | - | chr1_2:66799002-66799021 | Msa0086180:intron | 40.0% |
| TAGAAAGCTTCTTAGGACAG+AGG | - | chr1_2:66799039-66799058 | Msa0086180:intron | 40.0% | |
| ACAACGTGAGATGGTTGAAA+AGG | - | chr1_2:66799087-66799106 | Msa0086180:intron | 40.0% | |
| TTCTGCCAAAGTGGTTGAAA+AGG | - | chr1_2:66799141-66799160 | Msa0086180:intron | 40.0% | |
| TCTGCCAAAGTGGTTGAAAA+GGG | - | chr1_2:66799142-66799161 | Msa0086180:intron | 40.0% | |
| GTCCATGACTTGATGTCCTA+TGG | - | chr1_2:66794029-66794048 | Msa0086180:intron | 45.0% | |
| ACCCATAGGACATCAAGTCA+TGG | + | chr1_2:66794034-66794053 | None:intergenic | 45.0% | |
| AAAGTGTGGCCGATACAAGT+TGG | - | chr1_2:66794097-66794116 | Msa0086180:intron | 45.0% | |
| ACATAGAATGACCTTCCTGG+TGG | + | chr1_2:66794676-66794695 | None:intergenic | 45.0% | |
| TAGCAGAAGGAGAAGAGTCA+AGG | - | chr1_2:66795326-66795345 | Msa0086180:intron | 45.0% | |
| ! | GAAATGTGAGGAAGGGTGTA+TGG | - | chr1_2:66795370-66795389 | Msa0086180:intron | 45.0% |
| ! | GAAGGGTGTATGGGTAATAC+AGG | - | chr1_2:66795380-66795399 | Msa0086180:intron | 45.0% |
| AGGGTGTATGGGTAATACAG+GGG | - | chr1_2:66795382-66795401 | Msa0086180:intron | 45.0% | |
| CGACAAATCAGCATGGCTAA+CGG | - | chr1_2:66795531-66795550 | Msa0086180:intron | 45.0% | |
| CATCCATGAATTTCACGGCT+CGG | + | chr1_2:66795645-66795664 | None:intergenic | 45.0% | |
| AACCATTGAAAGAGGTGACG+TGG | - | chr1_2:66795690-66795709 | Msa0086180:intron | 45.0% | |
| CCAAAATAGACTTACAGGGG+CGG | + | chr1_2:66796475-66796494 | None:intergenic | 45.0% | |
| ! | CGCCCCTGTAAGTCTATTTT+GGG | - | chr1_2:66796473-66796492 | Msa0086180:intron | 45.0% |
| !! | CCCTGTAAGTCTATTTTGGG+TGG | - | chr1_2:66796476-66796495 | Msa0086180:intron | 45.0% |
| AAAACTGCCACCTTGTTCTC+TGG | - | chr1_2:66796703-66796722 | Msa0086180:intron | 45.0% | |
| CACACATGATGCTAGAGAGA+CGG | + | chr1_2:66796924-66796943 | None:intergenic | 45.0% | |
| !!! | GCGGTTTTGGCTCTTTTTGT+TGG | - | chr1_2:66797160-66797179 | Msa0086180:intron | 45.0% |
| AGTCAGTGGCTGTAACAGTT+TGG | - | chr1_2:66797430-66797449 | Msa0086180:intron | 45.0% | |
| CGGTGATCAAACAGTTCAAC+TGG | - | chr1_2:66797603-66797622 | Msa0086180:intron | 45.0% | |
| AGACATTGGGACTAAGAGCA+AGG | + | chr1_2:66797774-66797793 | None:intergenic | 45.0% | |
| AGAACAGGAAAACAGAGAGG+GGG | + | chr1_2:66797835-66797854 | None:intergenic | 45.0% | |
| CAGAACAGGAAAACAGAGAG+GGG | + | chr1_2:66797836-66797855 | None:intergenic | 45.0% | |
| ! | TTTTGGACCCTGATCAGAAC+AGG | + | chr1_2:66797850-66797869 | None:intergenic | 45.0% |
| GCTATGTTGCTACATGCTGT+TGG | - | chr1_2:66797942-66797961 | Msa0086180:intron | 45.0% | |
| TGTTGCTACATGCTGTTGGT+TGG | - | chr1_2:66797946-66797965 | Msa0086180:intron | 45.0% | |
| !! | TGCAGTGCTGAAAGTATCAC+TGG | - | chr1_2:66798568-66798587 | Msa0086180:intron | 45.0% |
| ACTTATCCAGAAAACTGGCG+AGG | - | chr1_2:66798691-66798710 | Msa0086180:intron | 45.0% | |
| !! | TGGTTGATTTGCCATGTCCT+TGG | + | chr1_2:66798807-66798826 | None:intergenic | 45.0% |
| TCAAGCAAGACAACGTGAGA+TGG | - | chr1_2:66799078-66799097 | Msa0086180:intron | 45.0% | |
| ! | GGAACCCTTTTCAACCACTT+TGG | + | chr1_2:66799149-66799168 | None:intergenic | 45.0% |
| GGAAGGAATCTCAGAAGATG+TGG | + | chr1_2:66799170-66799189 | None:intergenic | 45.0% | |
| !!! | AATAATAATATTTAAAATTG+TGG | + | chr1_2:66793478-66793497 | None:intergenic | 5.0% |
| !!! | TAAAAATTTAATTTTTTTTC+TGG | + | chr1_2:66795013-66795032 | None:intergenic | 5.0% |
| !! | TAAAAATGAAAAATATAAAA+TGG | - | chr1_2:66795769-66795788 | Msa0086180:intron | 5.0% |
| !!! | TAACATATATTTTTTTTTTT+GGG | + | chr1_2:66795804-66795823 | None:intergenic | 5.0% |
| !!! | TTAACATATATTTTTTTTTT+TGG | + | chr1_2:66795805-66795824 | None:intergenic | 5.0% |
| !! | TATGAAATAAATTAAATTAA+GGG | + | chr1_2:66796835-66796854 | None:intergenic | 5.0% |
| !! | TTATGAAATAAATTAAATTA+AGG | + | chr1_2:66796836-66796855 | None:intergenic | 5.0% |
| !! | TTTATTTCATAAATAATATT+AGG | - | chr1_2:66796844-66796863 | Msa0086180:intron | 5.0% |
| TTAAAACCAACGCACACCGG+TGG | - | chr1_2:66793362-66793381 | Msa0086180:CDS | 50.0% | |
| TATTAACCACCGGTGTGCGT+TGG | + | chr1_2:66793371-66793390 | None:intergenic | 50.0% | |
| ! | AGGGCTGATTCTAGTGCAAG+TGG | + | chr1_2:66794240-66794259 | None:intergenic | 50.0% |
| AGAATGACCTTCCTGGTGGT+CGG | + | chr1_2:66794672-66794691 | None:intergenic | 50.0% | |
| TGCCACGTCACCTCTTTCAA+TGG | + | chr1_2:66795695-66795714 | None:intergenic | 50.0% | |
| ! | CCGCCCCTGTAAGTCTATTT+TGG | - | chr1_2:66796472-66796491 | Msa0086180:intron | 50.0% |
| GAATGACAGCACAGAGCTCA+TGG | - | chr1_2:66796609-66796628 | Msa0086180:intron | 50.0% | |
| !!! | GGTGGCAGTTTTTGAAGCCA+CGG | + | chr1_2:66796695-66796714 | None:intergenic | 50.0% |
| TCTCCATTCAGGGACAGTGA+CGG | - | chr1_2:66796774-66796793 | Msa0086180:intron | 50.0% | |
| !! | GGACAGTGACGGATCTCTTT+GGG | - | chr1_2:66796785-66796804 | Msa0086180:intron | 50.0% |
| TTGGGAGCCCAAAGATGTGA+TGG | - | chr1_2:66796803-66796822 | Msa0086180:intron | 50.0% | |
| TTGGTCAGTATCAGGTGTGG+TGG | - | chr1_2:66797252-66797271 | Msa0086180:intron | 50.0% | |
| TGGTCAGTATCAGGTGTGGT+GGG | - | chr1_2:66797253-66797272 | Msa0086180:intron | 50.0% | |
| AACAGAGAGGGGGCAAGAAA+AGG | + | chr1_2:66797825-66797844 | None:intergenic | 50.0% | |
| ! | CTTGATCCTCGCCAGTTTTC+TGG | + | chr1_2:66798700-66798719 | None:intergenic | 50.0% |
| ACTGGCGAGGATCAAGTAGT+CGG | - | chr1_2:66798704-66798723 | Msa0086180:intron | 50.0% | |
| CTCTTCTGCTACGGGCTTTA+TGG | - | chr1_2:66798730-66798749 | Msa0086180:intron | 50.0% | |
| ! | TGATTTGCCATGTCCTTGGC+TGG | + | chr1_2:66798803-66798822 | None:intergenic | 50.0% |
| ! | AGGATAGGTGCTGCAGAACT+TGG | + | chr1_2:66798851-66798870 | None:intergenic | 50.0% |
| AAGTTCTGCAGCACCTATCC+TGG | - | chr1_2:66798850-66798869 | Msa0086180:intron | 50.0% | |
| ACCTATCCTGGAAACTGGTG+AGG | - | chr1_2:66798862-66798881 | Msa0086180:intron | 50.0% | |
| TCCTCACCAGTTTCCAGGAT+AGG | + | chr1_2:66798866-66798885 | None:intergenic | 50.0% | |
| ACTGGTGAGGACCAAGTAGT+CGG | - | chr1_2:66798875-66798894 | Msa0086180:intron | 50.0% | |
| GAATCCATAAAGCCTGCAGC+AGG | + | chr1_2:66798908-66798927 | None:intergenic | 50.0% | |
| AGCTTCTTAGGACAGAGGAC+AGG | - | chr1_2:66799044-66799063 | Msa0086180:intron | 50.0% | |
| GCTTCTTAGGACAGAGGACA+GGG | - | chr1_2:66799045-66799064 | Msa0086180:intron | 50.0% | |
| TTAGGACAGAGGACAGGGTA+CGG | - | chr1_2:66799050-66799069 | Msa0086180:intron | 50.0% | |
| AATGACCTTCCTGGTGGTCG+GGG | + | chr1_2:66794670-66794689 | None:intergenic | 55.0% | |
| GAATGACCTTCCTGGTGGTC+GGG | + | chr1_2:66794671-66794690 | None:intergenic | 55.0% | |
| TGCAGGGCGACAAATCAGCA+TGG | - | chr1_2:66795524-66795543 | Msa0086180:intron | 55.0% | |
| ! | AGCATGGCTAACGGAGCACT+TGG | - | chr1_2:66795540-66795559 | Msa0086180:intron | 55.0% |
| ! | TGGCTAACGGAGCACTTGGA+CGG | - | chr1_2:66795544-66795563 | Msa0086180:intron | 55.0% |
| ! | TAACGGAGCACTTGGACGGA+GGG | - | chr1_2:66795548-66795567 | Msa0086180:intron | 55.0% |
| ! | GGACGGAGGGACCTTTTTGA+TGG | - | chr1_2:66795561-66795580 | Msa0086180:intron | 55.0% |
| TGGCCGAGCCGTGAAATTCA+TGG | - | chr1_2:66795639-66795658 | Msa0086180:intron | 55.0% | |
| GTCAAAGCTTCATCTGGCCG+TGG | - | chr1_2:66796675-66796694 | Msa0086180:intron | 55.0% | |
| GATCCGTCACTGTCCCTGAA+TGG | + | chr1_2:66796780-66796799 | None:intergenic | 55.0% | |
| !! | GGGACAGTGACGGATCTCTT+TGG | - | chr1_2:66796784-66796803 | Msa0086180:intron | 55.0% |
| !! | GGGGGTGCCATCACATCTTT+GGG | + | chr1_2:66796813-66796832 | None:intergenic | 55.0% |
| GAGTGAGATCGAGGAGTGAG+AGG | + | chr1_2:66796951-66796970 | None:intergenic | 55.0% | |
| CTCACTCCTCGATCTCACTC+AGG | - | chr1_2:66796951-66796970 | Msa0086180:intron | 55.0% | |
| GGAATGCCTGAGTGAGATCG+AGG | + | chr1_2:66796960-66796979 | None:intergenic | 55.0% | |
| ! | TCAGTATCAGGTGTGGTGGG+AGG | - | chr1_2:66797256-66797275 | Msa0086180:intron | 55.0% |
| ! | CAGTATCAGGTGTGGTGGGA+GGG | - | chr1_2:66797257-66797276 | Msa0086180:intron | 55.0% |
| ! | AGTATCAGGTGTGGTGGGAG+GGG | - | chr1_2:66797258-66797277 | Msa0086180:intron | 55.0% |
| AGTCGGTGGCTCTTCTGCTA+CGG | - | chr1_2:66798721-66798740 | Msa0086180:intron | 55.0% | |
| TAGCTGGAACACTCCAGCCA+AGG | - | chr1_2:66798787-66798806 | Msa0086180:intron | 55.0% | |
| GAACACTCCAGCCAAGGACA+TGG | - | chr1_2:66798793-66798812 | Msa0086180:intron | 55.0% | |
| GCAGCACCTATCCTGGAAAC+TGG | - | chr1_2:66798857-66798876 | Msa0086180:intron | 55.0% | |
| CTTGGTCCTCACCAGTTTCC+AGG | + | chr1_2:66798871-66798890 | None:intergenic | 55.0% | |
| CATAAAGCCTGCAGCAGGAG+GGG | + | chr1_2:66798903-66798922 | None:intergenic | 55.0% | |
| CCATAAAGCCTGCAGCAGGA+GGG | + | chr1_2:66798904-66798923 | None:intergenic | 55.0% | |
| TCCATAAAGCCTGCAGCAGG+AGG | + | chr1_2:66798905-66798924 | None:intergenic | 55.0% | |
| TAGGACAGAGGACAGGGTAC+GGG | - | chr1_2:66799051-66799070 | Msa0086180:intron | 55.0% | |
| AGGTTTGAACCCCGACCACC+AGG | - | chr1_2:66794658-66794677 | Msa0086180:intron | 60.0% | |
| TTGAACCCCGACCACCAGGA+AGG | - | chr1_2:66794662-66794681 | Msa0086180:intron | 60.0% | |
| ! | CTAACGGAGCACTTGGACGG+AGG | - | chr1_2:66795547-66795566 | Msa0086180:intron | 60.0% |
| !! | GGGGGGTGCCATCACATCTT+TGG | + | chr1_2:66796814-66796833 | None:intergenic | 60.0% |
| GGCGAGGATCAAGTAGTCGG+TGG | - | chr1_2:66798707-66798726 | Msa0086180:intron | 60.0% | |
| GTCGGTGGCTCTTCTGCTAC+GGG | - | chr1_2:66798722-66798741 | Msa0086180:intron | 60.0% | |
| CCCTCCTGCTGCAGGCTTTA+TGG | - | chr1_2:66798901-66798920 | Msa0086180:intron | 60.0% | |
| !! | CAGGAGGGGCACCGACTACT+TGG | + | chr1_2:66798889-66798908 | None:intergenic | 65.0% |
| ! | CAGGTGTGGTGGGAGGGGTG+AGG | - | chr1_2:66797263-66797282 | Msa0086180:intron | 70.0% |
| ! | GTCGGTGCCCCTCCTGCTGC+AGG | - | chr1_2:66798893-66798912 | Msa0086180:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66793181 | 66799195 | 66793181 | ID=Msa0086180;Name=Msa0086180 |
| chr1_2 | mRNA | 66793181 | 66799195 | 66793181 | ID=Msa0086180-mRNA-1;Parent=Msa0086180;Name=Msa0086180-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|0.66|0|0.33|3|0|195 |
| chr1_2 | exon | 66799192 | 66799195 | 66799192 | ID=Msa0086180-mRNA-1:exon:22585;Parent=Msa0086180-mRNA-1 |
| chr1_2 | exon | 66793796 | 66793803 | 66793796 | ID=Msa0086180-mRNA-1:exon:22584;Parent=Msa0086180-mRNA-1 |
| chr1_2 | exon | 66793181 | 66793756 | 66793181 | ID=Msa0086180-mRNA-1:exon:22583;Parent=Msa0086180-mRNA-1 |
| chr1_2 | CDS | 66799192 | 66799195 | 66799192 | ID=Msa0086180-mRNA-1:cds;Parent=Msa0086180-mRNA-1 |
| chr1_2 | CDS | 66793796 | 66793803 | 66793796 | ID=Msa0086180-mRNA-1:cds;Parent=Msa0086180-mRNA-1 |
| chr1_2 | CDS | 66793181 | 66793756 | 66793181 | ID=Msa0086180-mRNA-1:cds;Parent=Msa0086180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
