Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108820 | XP_013449172.1 | 81.763 | 329 | 36 | 3 | 1 | 305 | 1 | 329 | 1.09e-169 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108820 | sp|Q8VYP0|SCO11_ARATH | 53.614 | 332 | 119 | 6 | 9 | 305 | 3 | 334 | 9.21e-104 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108820 | A0A072U091 | 81.763 | 329 | 36 | 3 | 1 | 305 | 1 | 329 | 5.20e-170 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa1108820 | 0.804501 | 2.096154e-49 | -8.615850e-47 |
| Msa0029260 | Msa1108820 | 0.816327 | 5.856456e-52 | -8.615850e-47 |
| Msa0032580 | Msa1108820 | 0.832341 | 9.989759e-56 | -8.615850e-47 |
| Msa0043660 | Msa1108820 | 0.820911 | 5.340152e-53 | -8.615850e-47 |
| Msa0047160 | Msa1108820 | 0.824591 | 7.428592e-54 | -8.615850e-47 |
| Msa0057140 | Msa1108820 | 0.800565 | 1.357575e-48 | -8.615850e-47 |
| Msa0073480 | Msa1108820 | 0.805804 | 1.118408e-49 | -8.615850e-47 |
| Msa0075500 | Msa1108820 | 0.802654 | 5.063793e-49 | -8.615850e-47 |
| Msa0076780 | Msa1108820 | 0.806986 | 6.300866e-50 | -8.615850e-47 |
| Msa0079820 | Msa1108820 | 0.820586 | 6.342926e-53 | -8.615850e-47 |
| Msa0082680 | Msa1108820 | -0.801542 | 8.573656e-49 | -8.615850e-47 |
| Msa0086180 | Msa1108820 | 0.806792 | 6.925422e-50 | -8.615850e-47 |
| Msa0094470 | Msa1108820 | 0.821235 | 4.497506e-53 | -8.615850e-47 |
| Msa0094920 | Msa1108820 | 0.821873 | 3.202320e-53 | -8.615850e-47 |
| Msa0100740 | Msa1108820 | 0.805628 | 1.217618e-49 | -8.615850e-47 |
| Msa0105620 | Msa1108820 | 0.800991 | 1.111537e-48 | -8.615850e-47 |
| Msa0605000 | Msa1108820 | 0.839514 | 1.514147e-57 | -8.615850e-47 |
| Msa0609000 | Msa1108820 | 0.833925 | 4.028948e-56 | -8.615850e-47 |
| Msa0610390 | Msa1108820 | 0.838344 | 3.040878e-57 | -8.615850e-47 |
| Msa0616240 | Msa1108820 | 0.805797 | 1.122046e-49 | -8.615850e-47 |
| Msa0618930 | Msa1108820 | 0.831735 | 1.410496e-55 | -8.615850e-47 |
| Msa0631350 | Msa1108820 | 0.810652 | 1.036024e-50 | -8.615850e-47 |
| Msa0650920 | Msa1108820 | 0.836322 | 1.001455e-56 | -8.615850e-47 |
| Msa0669720 | Msa1108820 | 0.806673 | 7.336947e-50 | -8.615850e-47 |
| Msa0669760 | Msa1108820 | 0.827422 | 1.578444e-54 | -8.615850e-47 |
| Msa0677290 | Msa1108820 | 0.800462 | 1.424945e-48 | -8.615850e-47 |
| Msa0677770 | Msa1108820 | 0.812555 | 3.997791e-51 | -8.615850e-47 |
| Msa0685140 | Msa1108820 | 0.822057 | 2.903169e-53 | -8.615850e-47 |
| Msa0691900 | Msa1108820 | 0.834223 | 3.393517e-56 | -8.615850e-47 |
| Msa0692940 | Msa1108820 | 0.816769 | 4.662708e-52 | -8.615850e-47 |
| Msa0699570 | Msa1108820 | 0.810931 | 9.019384e-51 | -8.615850e-47 |
| Msa0709500 | Msa1108820 | 0.806449 | 8.182113e-50 | -8.615850e-47 |
| Msa0715650 | Msa1108820 | 0.838990 | 2.070091e-57 | -8.615850e-47 |
| Msa0719420 | Msa1108820 | 0.869599 | 2.743698e-66 | -8.615850e-47 |
| Msa0753140 | Msa1108820 | 0.812254 | 4.650978e-51 | -8.615850e-47 |
| Msa0772480 | Msa1108820 | 0.870973 | 9.731381e-67 | -8.615850e-47 |
| Msa0784860 | Msa1108820 | 0.825865 | 3.712881e-54 | -8.615850e-47 |
| Msa0789680 | Msa1108820 | 0.871061 | 9.105610e-67 | -8.615850e-47 |
| Msa0790850 | Msa1108820 | 0.810846 | 9.405957e-51 | -8.615850e-47 |
| Msa0793390 | Msa1108820 | 0.810476 | 1.131023e-50 | -8.615850e-47 |
| Msa0798440 | Msa1108820 | 0.881643 | 2.023316e-70 | -8.615850e-47 |
| Msa0802410 | Msa1108820 | 0.860855 | 1.543428e-63 | -8.615850e-47 |
| Msa0805500 | Msa1108820 | 0.816716 | 4.790341e-52 | -8.615850e-47 |
| Msa0806880 | Msa1108820 | 0.800721 | 1.262191e-48 | -8.615850e-47 |
| Msa0806920 | Msa1108820 | 0.816450 | 5.497267e-52 | -8.615850e-47 |
| Msa0819060 | Msa1108820 | 0.806380 | 8.460856e-50 | -8.615850e-47 |
| Msa0830540 | Msa1108820 | 0.832561 | 8.812340e-56 | -8.615850e-47 |
| Msa0839200 | Msa1108820 | 0.829470 | 5.056444e-55 | -8.615850e-47 |
| Msa0121590 | Msa1108820 | 0.830034 | 3.685080e-55 | -8.615850e-47 |
| Msa0126840 | Msa1108820 | 0.812055 | 5.138763e-51 | -8.615850e-47 |
| Msa0127390 | Msa1108820 | 0.808728 | 2.685627e-50 | -8.615850e-47 |
| Msa0132440 | Msa1108820 | 0.801230 | 9.931553e-49 | -8.615850e-47 |
| Msa0137550 | Msa1108820 | 0.810699 | 1.012148e-50 | -8.615850e-47 |
| Msa0145730 | Msa1108820 | 0.800911 | 1.154234e-48 | -8.615850e-47 |
| Msa0146770 | Msa1108820 | 0.833074 | 6.569561e-56 | -8.615850e-47 |
| Msa0159170 | Msa1108820 | 0.803204 | 3.896836e-49 | -8.615850e-47 |
| Msa0165660 | Msa1108820 | 0.805016 | 1.635812e-49 | -8.615850e-47 |
| Msa0165950 | Msa1108820 | 0.817989 | 2.476744e-52 | -8.615850e-47 |
| Msa0166750 | Msa1108820 | 0.800595 | 1.339139e-48 | -8.615850e-47 |
| Msa0167480 | Msa1108820 | 0.814822 | 1.266981e-51 | -8.615850e-47 |
| Msa0169300 | Msa1108820 | 0.813615 | 2.339693e-51 | -8.615850e-47 |
| Msa0172970 | Msa1108820 | 0.833349 | 5.612730e-56 | -8.615850e-47 |
| Msa0178990 | Msa1108820 | 0.803248 | 3.817389e-49 | -8.615850e-47 |
| Msa0183460 | Msa1108820 | 0.800523 | 1.384877e-48 | -8.615850e-47 |
| Msa0187930 | Msa1108820 | 0.805573 | 1.250796e-49 | -8.615850e-47 |
| Msa0189300 | Msa1108820 | 0.827454 | 1.551092e-54 | -8.615850e-47 |
| Msa0194540 | Msa1108820 | 0.809397 | 1.931105e-50 | -8.615850e-47 |
| Msa0199690 | Msa1108820 | 0.832907 | 7.231000e-56 | -8.615850e-47 |
| Msa0214710 | Msa1108820 | 0.806599 | 7.606361e-50 | -8.615850e-47 |
| Msa0220720 | Msa1108820 | 0.814186 | 1.751105e-51 | -8.615850e-47 |
| Msa0227400 | Msa1108820 | 0.807051 | 6.103895e-50 | -8.615850e-47 |
| Msa0231660 | Msa1108820 | 0.840767 | 7.130226e-58 | -8.615850e-47 |
| Msa0236270 | Msa1108820 | 0.816224 | 6.174090e-52 | -8.615850e-47 |
| Msa0376690 | Msa1108820 | 0.815089 | 1.105339e-51 | -8.615850e-47 |
| Msa0385580 | Msa1108820 | 0.807204 | 5.666872e-50 | -8.615850e-47 |
| Msa0387910 | Msa1108820 | 0.815083 | 1.108563e-51 | -8.615850e-47 |
| Msa0388050 | Msa1108820 | 0.805303 | 1.424570e-49 | -8.615850e-47 |
| Msa0419520 | Msa1108820 | 0.842639 | 2.286466e-58 | -8.615850e-47 |
| Msa0443390 | Msa1108820 | 0.809323 | 2.002776e-50 | -8.615850e-47 |
| Msa0458060 | Msa1108820 | 0.835236 | 1.887026e-56 | -8.615850e-47 |
| Msa0465550 | Msa1108820 | 0.834119 | 3.603106e-56 | -8.615850e-47 |
| Msa0467220 | Msa1108820 | 0.811915 | 5.514272e-51 | -8.615850e-47 |
| Msa0471590 | Msa1108820 | 0.822864 | 1.885825e-53 | -8.615850e-47 |
| Msa0989540 | Msa1108820 | 0.817584 | 3.056607e-52 | -8.615850e-47 |
| Msa1009820 | Msa1108820 | 0.816110 | 6.548894e-52 | -8.615850e-47 |
| Msa1019240 | Msa1108820 | 0.837261 | 5.769314e-57 | -8.615850e-47 |
| Msa1019260 | Msa1108820 | 0.826668 | 2.391094e-54 | -8.615850e-47 |
| Msa1024770 | Msa1108820 | 0.815082 | 1.108996e-51 | -8.615850e-47 |
| Msa1029970 | Msa1108820 | 0.815025 | 1.142065e-51 | -8.615850e-47 |
| Msa1050200 | Msa1108820 | 0.800718 | 1.263478e-48 | -8.615850e-47 |
| Msa1051200 | Msa1108820 | 0.816988 | 4.163274e-52 | -8.615850e-47 |
| Msa1072710 | Msa1108820 | 0.800545 | 1.370955e-48 | -8.615850e-47 |
| Msa1077030 | Msa1108820 | 0.830979 | 2.164538e-55 | -8.615850e-47 |
| Msa1084470 | Msa1108820 | 0.851686 | 7.550342e-61 | -8.615850e-47 |
| Msa1088290 | Msa1108820 | 0.805575 | 1.249317e-49 | -8.615850e-47 |
| Msa1104140 | Msa1108820 | 0.827380 | 1.615730e-54 | -8.615850e-47 |
| Msa1104210 | Msa1108820 | 0.833318 | 5.712563e-56 | -8.615850e-47 |
| Msa0244780 | Msa1108820 | 0.804225 | 2.393012e-49 | -8.615850e-47 |
| Msa0260210 | Msa1108820 | 0.820699 | 5.975479e-53 | -8.615850e-47 |
| Msa0262050 | Msa1108820 | 0.810337 | 1.211824e-50 | -8.615850e-47 |
| Msa0262310 | Msa1108820 | 0.828409 | 9.135564e-55 | -8.615850e-47 |
| Msa0268130 | Msa1108820 | 0.801193 | 1.010398e-48 | -8.615850e-47 |
| Msa0280430 | Msa1108820 | 0.832579 | 8.720423e-56 | -8.615850e-47 |
| Msa0291520 | Msa1108820 | 0.819339 | 1.223097e-52 | -8.615850e-47 |
| Msa0299870 | Msa1108820 | 0.804572 | 2.026011e-49 | -8.615850e-47 |
| Msa0300350 | Msa1108820 | 0.813622 | 2.331450e-51 | -8.615850e-47 |
| Msa0304290 | Msa1108820 | 0.813615 | 2.340444e-51 | -8.615850e-47 |
| Msa0304330 | Msa1108820 | 0.820616 | 6.243517e-53 | -8.615850e-47 |
| Msa0304660 | Msa1108820 | 0.801995 | 6.920022e-49 | -8.615850e-47 |
| Msa0305890 | Msa1108820 | 0.819342 | 1.221473e-52 | -8.615850e-47 |
| Msa0331700 | Msa1108820 | 0.801170 | 1.021595e-48 | -8.615850e-47 |
| Msa0337240 | Msa1108820 | 0.821255 | 4.450436e-53 | -8.615850e-47 |
| Msa0337650 | Msa1108820 | 0.832385 | 9.743286e-56 | -8.615850e-47 |
| Msa0340810 | Msa1108820 | 0.819728 | 9.971570e-53 | -8.615850e-47 |
| Msa0351990 | Msa1108820 | 0.813029 | 3.148172e-51 | -8.615850e-47 |
| Msa1108820 | Msa1120810 | 0.827982 | 1.158060e-54 | -8.615850e-47 |
| Msa1108820 | Msa1122820 | 0.833254 | 5.926057e-56 | -8.615850e-47 |
| Msa1108820 | Msa1126850 | 0.844086 | 9.401105e-59 | -8.615850e-47 |
| Msa1108820 | Msa1137700 | 0.840428 | 8.747479e-58 | -8.615850e-47 |
| Msa1108820 | Msa1138520 | 0.802049 | 6.744327e-49 | -8.615850e-47 |
| Msa1108820 | Msa1138870 | 0.849604 | 2.905956e-60 | -8.615850e-47 |
| Msa1108820 | Msa1156870 | 0.809317 | 2.008420e-50 | -8.615850e-47 |
| Msa1108820 | Msa1165780 | 0.802166 | 6.381941e-49 | -8.615850e-47 |
| Msa1108820 | Msa1165960 | 0.823561 | 1.296286e-53 | -8.615850e-47 |
| Msa1108820 | Msa1166870 | 0.827103 | 1.881683e-54 | -8.615850e-47 |
| Msa1108820 | Msa1171360 | 0.803497 | 3.389107e-49 | -8.615850e-47 |
| Msa1108820 | Msa1179950 | 0.818359 | 2.042786e-52 | -8.615850e-47 |
| Msa1108820 | Msa1179980 | 0.828335 | 9.517871e-55 | -8.615850e-47 |
| Msa1108820 | Msa1197320 | 0.805395 | 1.363152e-49 | -8.615850e-47 |
| Msa1108820 | Msa1209260 | 0.824947 | 6.124839e-54 | -8.615850e-47 |
| Msa1108820 | Msa1209760 | 0.808347 | 3.238455e-50 | -8.615850e-47 |
| Msa1108820 | Msa1224810 | 0.827212 | 1.771826e-54 | -8.615850e-47 |
| Msa1108820 | Msa1237940 | 0.847213 | 1.333483e-59 | -8.615850e-47 |
| Msa1108820 | Msa1265630 | 0.820835 | 5.559472e-53 | -8.615850e-47 |
| Msa1108820 | Msa1270620 | 0.829711 | 4.418010e-55 | -8.615850e-47 |
| Msa1108820 | Msa1270690 | 0.828390 | 9.232355e-55 | -8.615850e-47 |
| Msa1108820 | Msa1286510 | 0.806543 | 7.818029e-50 | -8.615850e-47 |
| Msa1108820 | Msa1306990 | 0.803233 | 3.843980e-49 | -8.615850e-47 |
| Msa1108820 | Msa1331710 | 0.845044 | 5.189269e-59 | -8.615850e-47 |
| Msa1108820 | Msa1349570 | 0.804345 | 2.258859e-49 | -8.615850e-47 |
| Msa1108820 | Msa1355700 | 0.825044 | 5.809480e-54 | -8.615850e-47 |
| Msa1108820 | Msa1362090 | 0.806612 | 7.560192e-50 | -8.615850e-47 |
| Msa1108820 | Msa1363330 | 0.825068 | 5.732385e-54 | -8.615850e-47 |
| Msa1108820 | Msa1385100 | 0.807142 | 5.840448e-50 | -8.615850e-47 |
| Msa1108820 | Msa1386600 | 0.825203 | 5.326772e-54 | -8.615850e-47 |
| Msa1108820 | Msa1394290 | 0.821654 | 3.598875e-53 | -8.615850e-47 |
| Msa1108820 | Msa1413500 | 0.807061 | 6.074496e-50 | -8.615850e-47 |
| Msa1108820 | Msa1436520 | 0.820909 | 5.346045e-53 | -8.615850e-47 |
| Msa1108820 | Msa1444310 | 0.847714 | 9.709211e-60 | -8.615850e-47 |
| Msa1108820 | Msa1452470 | 0.806914 | 6.527115e-50 | -8.615850e-47 |
| Msa1108820 | Msa1457920 | 0.815781 | 7.752336e-52 | -8.615850e-47 |
| Msa1108820 | Msa1465960 | 0.812261 | 4.633276e-51 | -8.615850e-47 |
| Msa0493920 | Msa1108820 | 0.819251 | 1.281045e-52 | -8.615850e-47 |
| Msa0508590 | Msa1108820 | 0.809239 | 2.087805e-50 | -8.615850e-47 |
| Msa0508870 | Msa1108820 | 0.806338 | 8.636959e-50 | -8.615850e-47 |
| Msa0511490 | Msa1108820 | 0.838754 | 2.383488e-57 | -8.615850e-47 |
| Msa0526540 | Msa1108820 | 0.825773 | 3.903857e-54 | -8.615850e-47 |
| Msa0534900 | Msa1108820 | 0.806187 | 9.293321e-50 | -8.615850e-47 |
| Msa0542090 | Msa1108820 | 0.817492 | 3.205890e-52 | -8.615850e-47 |
| Msa0542130 | Msa1108820 | 0.820689 | 6.005584e-53 | -8.615850e-47 |
| Msa0550540 | Msa1108820 | 0.809816 | 1.569228e-50 | -8.615850e-47 |
| Msa0550570 | Msa1108820 | 0.812640 | 3.829822e-51 | -8.615850e-47 |
| Msa0554290 | Msa1108820 | 0.801404 | 9.150699e-49 | -8.615850e-47 |
| Msa0555450 | Msa1108820 | 0.815541 | 8.769746e-52 | -8.615850e-47 |
| Msa0571920 | Msa1108820 | 0.813957 | 1.967812e-51 | -8.615850e-47 |
| Msa0576940 | Msa1108820 | 0.825811 | 3.823653e-54 | -8.615850e-47 |
| Msa0581130 | Msa1108820 | 0.823334 | 1.465060e-53 | -8.615850e-47 |
| Msa0581280 | Msa1108820 | 0.804723 | 1.884068e-49 | -8.615850e-47 |
| Msa0589190 | Msa1108820 | 0.807088 | 5.995120e-50 | -8.615850e-47 |
| Msa0887250 | Msa1108820 | 0.806836 | 6.779740e-50 | -8.615850e-47 |
| Msa0913240 | Msa1108820 | 0.806262 | 8.961294e-50 | -8.615850e-47 |
| Msa0925770 | Msa1108820 | 0.822588 | 2.186213e-53 | -8.615850e-47 |
| Msa0933290 | Msa1108820 | 0.830355 | 3.076826e-55 | -8.615850e-47 |
| Msa0945440 | Msa1108820 | 0.821008 | 5.071669e-53 | -8.615850e-47 |
| Msa0974810 | Msa1108820 | 0.804154 | 2.475768e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108820 | MtrunA17_Chr7g0242721 | 81.763 | 329 | 36 | 3 | 1 | 305 | 1 | 329 | 1.00e-173 | 483 |
| Msa1108820 | MtrunA17_Chr8g0382401 | 43.312 | 157 | 89 | 0 | 144 | 300 | 110 | 266 | 1.35e-47 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108820 | AT3G08950.1 | 53.614 | 332 | 119 | 6 | 9 | 305 | 3 | 334 | 9.36e-105 | 309 |
| Msa1108820 | AT4G39740.1 | 43.312 | 157 | 89 | 0 | 144 | 300 | 115 | 271 | 5.89e-44 | 151 |
Find 85 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAACACGTCAAGGTTTA+AGG | 0.127734 | 7_3:-52089647 | None:intergenic |
| AAATGGACATTGATGTATTT+TGG | 0.139865 | 7_3:+52091547 | Msa1108820:CDS |
| TAGATTGAGAAGCAAGTTTA+TGG | 0.154943 | 7_3:+52089996 | Msa1108820:intron |
| TCAAACAGTGATTCTGATTC+TGG | 0.240238 | 7_3:+52090116 | Msa1108820:CDS |
| AGTTCCTCGGGACAGATATC+TGG | 0.248240 | 7_3:-52091583 | None:intergenic |
| GAGATATTGTCATTGAATTT+AGG | 0.255902 | 7_3:+52093531 | Msa1108820:three_prime_UTR |
| CCAAAGTTGATTGGATTAAC+TGG | 0.296210 | 7_3:+52092453 | Msa1108820:CDS |
| AATCTCCAAAATTATCTAAA+AGG | 0.303425 | 7_3:-52093606 | None:intergenic |
| CGAGCATGTTACTTATTATA+CGG | 0.311040 | 7_3:-52093475 | None:intergenic |
| ACTTGCTGATGGAGTAATTA+AGG | 0.318558 | 7_3:+52093444 | Msa1108820:CDS |
| ATAAGGACTTCATGGGTAAA+TGG | 0.323446 | 7_3:+52091530 | Msa1108820:CDS |
| AATTCTTTCCAGATACTTGA+TGG | 0.323856 | 7_3:+52093369 | Msa1108820:intron |
| CTATCAGACGGTGGTTTATT+CGG | 0.331931 | 7_3:-52090086 | None:intergenic |
| AGAAGAGAGGAAGTGGGTTT+GGG | 0.332337 | 7_3:-52089797 | None:intergenic |
| AAGAAGAGAGGAAGTGGGTT+TGG | 0.336158 | 7_3:-52089798 | None:intergenic |
| TAAAATGACATACATGACTA+TGG | 0.350804 | 7_3:-52092568 | None:intergenic |
| AGAAGCAAGTTTATGGTAAT+GGG | 0.356500 | 7_3:+52090003 | Msa1108820:CDS |
| CTGCGGGAAAAGCTGCGATT+GGG | 0.363194 | 7_3:+52091464 | Msa1108820:CDS |
| GTAGCGGAAGAGGTTGGTTT+TGG | 0.370329 | 7_3:-52089738 | None:intergenic |
| GTCATTGAATTTAGGCTTTG+TGG | 0.376294 | 7_3:+52093539 | Msa1108820:three_prime_UTR |
| TGGGTTTGGGATTGCGAAGA+AGG | 0.378633 | 7_3:-52089784 | None:intergenic |
| GAATTTCATCCAAAGTTGAT+TGG | 0.378707 | 7_3:+52092444 | Msa1108820:intron |
| TAACATGCTCGCCTTGCTAT+TGG | 0.385843 | 7_3:+52093487 | Msa1108820:exon |
| TTGAACACGTCAAGGTTTAA+GGG | 0.402121 | 7_3:-52089646 | None:intergenic |
| GAGAAGCAAGTTTATGGTAA+TGG | 0.410270 | 7_3:+52090002 | Msa1108820:CDS |
| CTCCTTACAGAGGAGAAATC+TGG | 0.412185 | 7_3:+52092249 | Msa1108820:intron |
| AATGAAGGTTTGAACCTTTG+AGG | 0.424523 | 7_3:-52089685 | None:intergenic |
| TGTAACTGATAAGGACTTCA+TGG | 0.424704 | 7_3:+52091522 | Msa1108820:CDS |
| CCAGTTAATCCAATCAACTT+TGG | 0.424864 | 7_3:-52092453 | None:intergenic |
| TGATGATTCGTAAGCTCAAA+TGG | 0.436005 | 7_3:-52091490 | None:intergenic |
| AGCGAGAAGCGTAGCGGAAG+AGG | 0.436565 | 7_3:-52089748 | None:intergenic |
| TGGTGAAAGAAGAGAGGAAG+TGG | 0.447234 | 7_3:-52089804 | None:intergenic |
| ATGAAGGTTTGAACCTTTGA+GGG | 0.448380 | 7_3:-52089684 | None:intergenic |
| TAATTGACGTCATTGTTCAA+TGG | 0.462850 | 7_3:+52093665 | Msa1108820:three_prime_UTR |
| TGTTTCAGAGGTAGTTAAGC+AGG | 0.465407 | 7_3:+52091435 | Msa1108820:CDS |
| TCTGCGGGAAAAGCTGCGAT+TGG | 0.466176 | 7_3:+52091463 | Msa1108820:CDS |
| AGTGATTCTGATTCTGGTAA+AGG | 0.468239 | 7_3:+52090122 | Msa1108820:CDS |
| ACAAAGCTCAACCAAGCAAC+CGG | 0.468889 | 7_3:-52090494 | None:intergenic |
| CCAAGTCTAAAATAATTTGA+AGG | 0.469623 | 7_3:+52093577 | Msa1108820:three_prime_UTR |
| CAGACGGTGGTTTATTCGGT+GGG | 0.472687 | 7_3:-52090082 | None:intergenic |
| TACTAACTTCTGTAGTTCCT+CGG | 0.474104 | 7_3:-52091596 | None:intergenic |
| CCATGTGTTTGATGAAATGA+AGG | 0.475707 | 7_3:-52089700 | None:intergenic |
| TCTGGTAAAGGAAAAGAGTC+TGG | 0.482957 | 7_3:+52090134 | Msa1108820:CDS |
| TCTTTCACACCAACCTCGCC+AGG | 0.487138 | 7_3:+52089841 | Msa1108820:CDS |
| AACTTCACAAATCCCATGTC+AGG | 0.490485 | 7_3:-52093394 | None:intergenic |
| TACAAATACAAAACCCTCAA+AGG | 0.496784 | 7_3:+52089671 | Msa1108820:five_prime_UTR |
| CGGGAAACGTGTAACTGATA+AGG | 0.502114 | 7_3:+52091513 | Msa1108820:CDS |
| GAGAATGAACCTGGCGAGGT+TGG | 0.505718 | 7_3:-52089850 | None:intergenic |
| TGCGGGAAAAGCTGCGATTG+GGG | 0.507996 | 7_3:+52091465 | Msa1108820:CDS |
| ATACTTGATGGCACCTGACA+TGG | 0.521774 | 7_3:+52093381 | Msa1108820:CDS |
| GTGTGTTGCAGCCGGTTGCT+TGG | 0.531202 | 7_3:+52090483 | Msa1108820:intron |
| TGTTCAACAGTATCCCTCTC+AGG | 0.533850 | 7_3:-52092306 | None:intergenic |
| GTTAAGCAGGGACCTTCTGC+GGG | 0.534373 | 7_3:+52091448 | Msa1108820:CDS |
| TTTGTAAATTGAACACGTCA+AGG | 0.539215 | 7_3:-52089654 | None:intergenic |
| TTATCTCTGTTGATCCTGAG+AGG | 0.545683 | 7_3:+52092292 | Msa1108820:CDS |
| GTTCCTCGGGACAGATATCT+GGG | 0.552780 | 7_3:-52091582 | None:intergenic |
| ACTAACTTCTGTAGTTCCTC+GGG | 0.554513 | 7_3:-52091595 | None:intergenic |
| GAGTGATGGTGAAAGAAGAG+AGG | 0.554818 | 7_3:-52089810 | None:intergenic |
| AGAAGCGTAGCGGAAGAGGT+TGG | 0.556250 | 7_3:-52089744 | None:intergenic |
| GGTGAAAGAAGAGAGGAAGT+GGG | 0.558612 | 7_3:-52089803 | None:intergenic |
| TATCTCTGTTGATCCTGAGA+GGG | 0.559192 | 7_3:+52092293 | Msa1108820:CDS |
| GGTCGTTGATGCTGCATCAG+AGG | 0.573749 | 7_3:+52090024 | Msa1108820:CDS |
| AGTTAAGCAGGGACCTTCTG+CGG | 0.574559 | 7_3:+52091447 | Msa1108820:CDS |
| GATGTTGACTCACTTGCTGA+TGG | 0.579983 | 7_3:+52093433 | Msa1108820:CDS |
| TCAGACGGTGGTTTATTCGG+TGG | 0.582076 | 7_3:-52090083 | None:intergenic |
| CCTTCATTTCATCAAACACA+TGG | 0.590970 | 7_3:+52089700 | Msa1108820:exon |
| GAAGACAGCAGAGGAAGACT+CGG | 0.592685 | 7_3:+52092527 | Msa1108820:CDS |
| TTTGATGAATTACTATCAGA+CGG | 0.595613 | 7_3:-52090098 | None:intergenic |
| TTGAGCTTACGAATCATCAC+GGG | 0.601003 | 7_3:+52091494 | Msa1108820:CDS |
| AGACGGTGGTTTATTCGGTG+GGG | 0.604822 | 7_3:-52090081 | None:intergenic |
| GTAACTGATAAGGACTTCAT+GGG | 0.605698 | 7_3:+52091523 | Msa1108820:CDS |
| AAGAAGTACTACCAATAGCA+AGG | 0.609770 | 7_3:-52093498 | None:intergenic |
| GCGGGAAAAGCTGCGATTGG+GGG | 0.610060 | 7_3:+52091466 | Msa1108820:CDS |
| GTTTCAGAGGTAGTTAAGCA+GGG | 0.611915 | 7_3:+52091436 | Msa1108820:CDS |
| TTTGAGCTTACGAATCATCA+CGG | 0.614612 | 7_3:+52091493 | Msa1108820:CDS |
| TACTTGATGGCACCTGACAT+GGG | 0.617481 | 7_3:+52093382 | Msa1108820:CDS |
| AGAGAGAGCGAGAAGCGTAG+CGG | 0.620758 | 7_3:-52089754 | None:intergenic |
| AGAAGAGAATGAACCTGGCG+AGG | 0.623470 | 7_3:-52089854 | None:intergenic |
| GAAAGATGACGATAGAGTGA+TGG | 0.637253 | 7_3:-52089824 | None:intergenic |
| AGATATACAAAATGTTTCAG+AGG | 0.642439 | 7_3:+52091423 | Msa1108820:intron |
| GAGGGATACTGTTGAACAAG+TGG | 0.649326 | 7_3:+52092311 | Msa1108820:CDS |
| TTATTATATGAAGACAGCAG+AGG | 0.675812 | 7_3:+52092518 | Msa1108820:CDS |
| CTGCCCAGATATCTGTCCCG+AGG | 0.677827 | 7_3:+52091579 | Msa1108820:CDS |
| CAAGTGGCTGAATATGTCAA+AGG | 0.681667 | 7_3:+52092327 | Msa1108820:CDS |
| GATGAATTACTATCAGACGG+TGG | 0.700809 | 7_3:-52090095 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATATATTATACTATT+TGG | + | chr7_3:52092598-52092617 | Msa1108820:intron | 10.0% |
| !! | TTCATATATATTATACTATT+TGG | + | chr7_3:52092598-52092617 | Msa1108820:intron | 10.0% |
| !!! | TTTTATTCTTACATTTCAAT+TGG | + | chr7_3:52089930-52089949 | Msa1108820:intron | 15.0% |
| !! | TTTATTCTTACATTTCAATT+GGG | + | chr7_3:52089931-52089950 | Msa1108820:intron | 15.0% |
| !!! | TAATATGATTTTTATGAGTT+CGG | + | chr7_3:52090418-52090437 | Msa1108820:intron | 15.0% |
| !!! | TTATGATATCTAATCTTTTT+TGG | + | chr7_3:52090860-52090879 | Msa1108820:intron | 15.0% |
| !! | TTATTTAAAAATACAAGTAG+AGG | - | chr7_3:52090978-52090997 | None:intergenic | 15.0% |
| !! | AAAACAATTTATAGCTAATA+TGG | - | chr7_3:52092007-52092026 | None:intergenic | 15.0% |
| !! | TAGTATAATATATATGAAGT+AGG | - | chr7_3:52092596-52092615 | None:intergenic | 15.0% |
| !!! | AATAAGATGGATATATTTTT+AGG | - | chr7_3:52093202-52093221 | None:intergenic | 15.0% |
| !!! | TAATTCCTTTTAGATAATTT+TGG | + | chr7_3:52093601-52093620 | Msa1108820:three_prime_UTR | 15.0% |
| !! | ATTGTACTTAAAAAAAGATT+AGG | + | chr7_3:52093693-52093712 | Msa1108820:three_prime_UTR | 15.0% |
| !! | TTGTACTTAAAAAAAGATTA+GGG | + | chr7_3:52093694-52093713 | Msa1108820:three_prime_UTR | 15.0% |
| !!! | TTTTATTCTTACATTTCAAT+TGG | + | chr7_3:52089930-52089949 | Msa1108820:intron | 15.0% |
| !! | TTTATTCTTACATTTCAATT+GGG | + | chr7_3:52089931-52089950 | Msa1108820:intron | 15.0% |
| !!! | TAATATGATTTTTATGAGTT+CGG | + | chr7_3:52090418-52090437 | Msa1108820:intron | 15.0% |
| !!! | TTATGATATCTAATCTTTTT+TGG | + | chr7_3:52090860-52090879 | Msa1108820:intron | 15.0% |
| !! | TTATTTAAAAATACAAGTAG+AGG | - | chr7_3:52090978-52090997 | None:intergenic | 15.0% |
| !! | AAAACAATTTATAGCTAATA+TGG | - | chr7_3:52092007-52092026 | None:intergenic | 15.0% |
| !! | TAGTATAATATATATGAAGT+AGG | - | chr7_3:52092596-52092615 | None:intergenic | 15.0% |
| !!! | AATAAGATGGATATATTTTT+AGG | - | chr7_3:52093202-52093221 | None:intergenic | 15.0% |
| !!! | TAATTCCTTTTAGATAATTT+TGG | + | chr7_3:52093601-52093620 | Msa1108820:three_prime_UTR | 15.0% |
| !! | ATTGTACTTAAAAAAAGATT+AGG | + | chr7_3:52093693-52093712 | Msa1108820:three_prime_UTR | 15.0% |
| !! | TTGTACTTAAAAAAAGATTA+GGG | + | chr7_3:52093694-52093713 | Msa1108820:three_prime_UTR | 15.0% |
| !! | GAATAAAACAATGAAATTAG+AGG | - | chr7_3:52089918-52089937 | None:intergenic | 20.0% |
| !!! | CAATTTTCTCAGATTATTTT+TGG | + | chr7_3:52090309-52090328 | Msa1108820:intron | 20.0% |
| !!! | TTTGTTTTTCTGATTTTAAC+TGG | + | chr7_3:52090512-52090531 | Msa1108820:CDS | 20.0% |
| !!! | ATGTTAATTGTATGTCTTTT+TGG | + | chr7_3:52090663-52090682 | Msa1108820:intron | 20.0% |
| !!! | TGTTAATTGTATGTCTTTTT+GGG | + | chr7_3:52090664-52090683 | Msa1108820:intron | 20.0% |
| !! | TGATTGAATTTCAAATAGTT+TGG | + | chr7_3:52090827-52090846 | Msa1108820:intron | 20.0% |
| !! | TTTGCATTTAATTGTTAAAC+TGG | + | chr7_3:52091050-52091069 | Msa1108820:intron | 20.0% |
| !! | AGTAATTCGTCAAAAATATA+AGG | + | chr7_3:52091205-52091224 | Msa1108820:intron | 20.0% |
| !! | TGACTTATTTAAGCTTATAT+TGG | - | chr7_3:52092111-52092130 | None:intergenic | 20.0% |
| !! | TCCATTAATTGAAAAATCAA+TGG | - | chr7_3:52092734-52092753 | None:intergenic | 20.0% |
| !!! | GGAATTTATTTTAGATGAAA+AGG | - | chr7_3:52092769-52092788 | None:intergenic | 20.0% |
| !! | AATTACAATGTGAAAAAAAC+TGG | - | chr7_3:52092812-52092831 | None:intergenic | 20.0% |
| !! | TAATATATAAGTATCCTTGT+AGG | + | chr7_3:52093105-52093124 | Msa1108820:intron | 20.0% |
| !!! | TTTTTAGGAATAGAAGTTTA+GGG | - | chr7_3:52093187-52093206 | None:intergenic | 20.0% |
| !!! | ATTTTTAGGAATAGAAGTTT+AGG | - | chr7_3:52093188-52093207 | None:intergenic | 20.0% |
| !! | AAATTATATGTAACTGACAT+AGG | + | chr7_3:52093304-52093323 | Msa1108820:intron | 20.0% |
| !! | AATTATATGTAACTGACATA+GGG | + | chr7_3:52093305-52093324 | Msa1108820:intron | 20.0% |
| !! | AATCTCCAAAATTATCTAAA+AGG | - | chr7_3:52093609-52093628 | None:intergenic | 20.0% |
| !!! | GAGATTTGACATTTTTAATA+GGG | + | chr7_3:52093623-52093642 | Msa1108820:three_prime_UTR | 20.0% |
| !! | GAATAAAACAATGAAATTAG+AGG | - | chr7_3:52089918-52089937 | None:intergenic | 20.0% |
| !!! | CAATTTTCTCAGATTATTTT+TGG | + | chr7_3:52090309-52090328 | Msa1108820:intron | 20.0% |
| !!! | TTTGTTTTTCTGATTTTAAC+TGG | + | chr7_3:52090512-52090531 | Msa1108820:CDS | 20.0% |
| !!! | ATGTTAATTGTATGTCTTTT+TGG | + | chr7_3:52090663-52090682 | Msa1108820:intron | 20.0% |
| !!! | TGTTAATTGTATGTCTTTTT+GGG | + | chr7_3:52090664-52090683 | Msa1108820:intron | 20.0% |
| !! | TGATTGAATTTCAAATAGTT+TGG | + | chr7_3:52090827-52090846 | Msa1108820:intron | 20.0% |
| !! | TTTGCATTTAATTGTTAAAC+TGG | + | chr7_3:52091050-52091069 | Msa1108820:intron | 20.0% |
| !! | AGTAATTCGTCAAAAATATA+AGG | + | chr7_3:52091205-52091224 | Msa1108820:intron | 20.0% |
| !! | TGACTTATTTAAGCTTATAT+TGG | - | chr7_3:52092111-52092130 | None:intergenic | 20.0% |
| !! | TCCATTAATTGAAAAATCAA+TGG | - | chr7_3:52092734-52092753 | None:intergenic | 20.0% |
| !!! | GGAATTTATTTTAGATGAAA+AGG | - | chr7_3:52092769-52092788 | None:intergenic | 20.0% |
| !! | AATTACAATGTGAAAAAAAC+TGG | - | chr7_3:52092812-52092831 | None:intergenic | 20.0% |
| !! | TAATATATAAGTATCCTTGT+AGG | + | chr7_3:52093105-52093124 | Msa1108820:intron | 20.0% |
| !!! | TTTTTAGGAATAGAAGTTTA+GGG | - | chr7_3:52093187-52093206 | None:intergenic | 20.0% |
| !!! | ATTTTTAGGAATAGAAGTTT+AGG | - | chr7_3:52093188-52093207 | None:intergenic | 20.0% |
| !! | AAATTATATGTAACTGACAT+AGG | + | chr7_3:52093304-52093323 | Msa1108820:intron | 20.0% |
| !! | AATTATATGTAACTGACATA+GGG | + | chr7_3:52093305-52093324 | Msa1108820:intron | 20.0% |
| !! | AATCTCCAAAATTATCTAAA+AGG | - | chr7_3:52093609-52093628 | None:intergenic | 20.0% |
| !!! | GAGATTTGACATTTTTAATA+GGG | + | chr7_3:52093623-52093642 | Msa1108820:three_prime_UTR | 20.0% |
| !! | GGTTTTTATGATCAAATTGA+AGG | - | chr7_3:52089886-52089905 | None:intergenic | 25.0% |
| ! | TGAAATTAGAGGTAAAAAAG+TGG | - | chr7_3:52089907-52089926 | None:intergenic | 25.0% |
| ! | TTTGATGAATTACTATCAGA+CGG | - | chr7_3:52090101-52090120 | None:intergenic | 25.0% |
| ! | ATTGGTATATTACTATGACA+AGG | + | chr7_3:52090541-52090560 | Msa1108820:intron | 25.0% |
| ! | ATATAGAAGGTAGATTACTA+TGG | + | chr7_3:52090576-52090595 | Msa1108820:intron | 25.0% |
| ! | ACATACAATTAACATAGACA+TGG | - | chr7_3:52090658-52090677 | None:intergenic | 25.0% |
| ! | TTGTTCACTGTATTATTGTT+TGG | + | chr7_3:52090693-52090712 | Msa1108820:intron | 25.0% |
| !!! | TAATCTTTTTTGGTGTAAAC+TGG | + | chr7_3:52090870-52090889 | Msa1108820:intron | 25.0% |
| !!! | AATCTTTTTTGGTGTAAACT+GGG | + | chr7_3:52090871-52090890 | Msa1108820:intron | 25.0% |
| ! | TATAAACACTGCAAATTCAA+TGG | + | chr7_3:52091080-52091099 | Msa1108820:intron | 25.0% |
| ! | GAATACAAAATTACTTGATC+TGG | - | chr7_3:52091106-52091125 | None:intergenic | 25.0% |
| ! | TAAGAAAATAATAAAGGGAC+AGG | - | chr7_3:52091173-52091192 | None:intergenic | 25.0% |
| !! | TGATTTTATAGAATCTTAGC+AGG | + | chr7_3:52091241-52091260 | Msa1108820:intron | 25.0% |
| !! | GATTTTATAGAATCTTAGCA+GGG | + | chr7_3:52091242-52091261 | Msa1108820:intron | 25.0% |
| ! | AGATATACAAAATGTTTCAG+AGG | + | chr7_3:52091423-52091442 | Msa1108820:intron | 25.0% |
| !! | AAATGGACATTGATGTATTT+TGG | + | chr7_3:52091547-52091566 | Msa1108820:CDS | 25.0% |
| !! | TAGCTATAAATTGTTTTCAC+AGG | + | chr7_3:52092010-52092029 | Msa1108820:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr7_3:52092119-52092138 | Msa1108820:intron | 25.0% |
| !!! | ACTAGTGTTTTAGATCTTAA+TGG | + | chr7_3:52092168-52092187 | Msa1108820:intron | 25.0% |
| !!! | ACACTTTTTATATCTCATGT+TGG | + | chr7_3:52092374-52092393 | Msa1108820:intron | 25.0% |
| ! | TAAAATGACATACATGACTA+TGG | - | chr7_3:52092571-52092590 | None:intergenic | 25.0% |
| ! | AGGAAAAAATGAGATAGTAT+AGG | + | chr7_3:52092635-52092654 | Msa1108820:intron | 25.0% |
| !!! | GCCATTGATTTTTCAATTAA+TGG | + | chr7_3:52092730-52092749 | Msa1108820:intron | 25.0% |
| !!! | TTATTTTAGATGAAAAGGTG+AGG | - | chr7_3:52092764-52092783 | None:intergenic | 25.0% |
| !! | TTTGAAATATATCCATGCAA+AGG | + | chr7_3:52092910-52092929 | Msa1108820:intron | 25.0% |
| ! | TTGAAATATATCCATGCAAA+GGG | + | chr7_3:52092911-52092930 | Msa1108820:intron | 25.0% |
| !!! | TTTTAGGAATAGAAGTTTAG+GGG | - | chr7_3:52093186-52093205 | None:intergenic | 25.0% |
| ! | CTTCAAAGTTATGAATAAGA+TGG | - | chr7_3:52093215-52093234 | None:intergenic | 25.0% |
| ! | GAGATATTGTCATTGAATTT+AGG | + | chr7_3:52093531-52093550 | Msa1108820:three_prime_UTR | 25.0% |
| !!! | CCTTCAAATTATTTTAGACT+TGG | - | chr7_3:52093580-52093599 | None:intergenic | 25.0% |
| !! | CCAAGTCTAAAATAATTTGA+AGG | + | chr7_3:52093577-52093596 | Msa1108820:three_prime_UTR | 25.0% |
| !! | GGAGATTTGACATTTTTAAT+AGG | + | chr7_3:52093622-52093641 | Msa1108820:three_prime_UTR | 25.0% |
| !! | GGTTTTTATGATCAAATTGA+AGG | - | chr7_3:52089886-52089905 | None:intergenic | 25.0% |
| ! | TGAAATTAGAGGTAAAAAAG+TGG | - | chr7_3:52089907-52089926 | None:intergenic | 25.0% |
| ! | TTTGATGAATTACTATCAGA+CGG | - | chr7_3:52090101-52090120 | None:intergenic | 25.0% |
| ! | ATTGGTATATTACTATGACA+AGG | + | chr7_3:52090541-52090560 | Msa1108820:intron | 25.0% |
| ! | ATATAGAAGGTAGATTACTA+TGG | + | chr7_3:52090576-52090595 | Msa1108820:intron | 25.0% |
| ! | ACATACAATTAACATAGACA+TGG | - | chr7_3:52090658-52090677 | None:intergenic | 25.0% |
| ! | TTGTTCACTGTATTATTGTT+TGG | + | chr7_3:52090693-52090712 | Msa1108820:intron | 25.0% |
| !!! | TAATCTTTTTTGGTGTAAAC+TGG | + | chr7_3:52090870-52090889 | Msa1108820:intron | 25.0% |
| !!! | AATCTTTTTTGGTGTAAACT+GGG | + | chr7_3:52090871-52090890 | Msa1108820:intron | 25.0% |
| ! | TATAAACACTGCAAATTCAA+TGG | + | chr7_3:52091080-52091099 | Msa1108820:intron | 25.0% |
| ! | GAATACAAAATTACTTGATC+TGG | - | chr7_3:52091106-52091125 | None:intergenic | 25.0% |
| ! | TAAGAAAATAATAAAGGGAC+AGG | - | chr7_3:52091173-52091192 | None:intergenic | 25.0% |
| !! | TGATTTTATAGAATCTTAGC+AGG | + | chr7_3:52091241-52091260 | Msa1108820:intron | 25.0% |
| !! | GATTTTATAGAATCTTAGCA+GGG | + | chr7_3:52091242-52091261 | Msa1108820:intron | 25.0% |
| ! | AGATATACAAAATGTTTCAG+AGG | + | chr7_3:52091423-52091442 | Msa1108820:intron | 25.0% |
| !! | AAATGGACATTGATGTATTT+TGG | + | chr7_3:52091547-52091566 | Msa1108820:CDS | 25.0% |
| !! | TAGCTATAAATTGTTTTCAC+AGG | + | chr7_3:52092010-52092029 | Msa1108820:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr7_3:52092119-52092138 | Msa1108820:intron | 25.0% |
| !!! | ACTAGTGTTTTAGATCTTAA+TGG | + | chr7_3:52092168-52092187 | Msa1108820:intron | 25.0% |
| !!! | ACACTTTTTATATCTCATGT+TGG | + | chr7_3:52092374-52092393 | Msa1108820:intron | 25.0% |
| ! | TAAAATGACATACATGACTA+TGG | - | chr7_3:52092571-52092590 | None:intergenic | 25.0% |
| ! | AGGAAAAAATGAGATAGTAT+AGG | + | chr7_3:52092635-52092654 | Msa1108820:intron | 25.0% |
| !!! | GCCATTGATTTTTCAATTAA+TGG | + | chr7_3:52092730-52092749 | Msa1108820:intron | 25.0% |
| !!! | TTATTTTAGATGAAAAGGTG+AGG | - | chr7_3:52092764-52092783 | None:intergenic | 25.0% |
| !! | TTTGAAATATATCCATGCAA+AGG | + | chr7_3:52092910-52092929 | Msa1108820:intron | 25.0% |
| ! | TTGAAATATATCCATGCAAA+GGG | + | chr7_3:52092911-52092930 | Msa1108820:intron | 25.0% |
| !!! | TTTTAGGAATAGAAGTTTAG+GGG | - | chr7_3:52093186-52093205 | None:intergenic | 25.0% |
| ! | CTTCAAAGTTATGAATAAGA+TGG | - | chr7_3:52093215-52093234 | None:intergenic | 25.0% |
| ! | GAGATATTGTCATTGAATTT+AGG | + | chr7_3:52093531-52093550 | Msa1108820:three_prime_UTR | 25.0% |
| !!! | CCTTCAAATTATTTTAGACT+TGG | - | chr7_3:52093580-52093599 | None:intergenic | 25.0% |
| !! | CCAAGTCTAAAATAATTTGA+AGG | + | chr7_3:52093577-52093596 | Msa1108820:three_prime_UTR | 25.0% |
| !! | GGAGATTTGACATTTTTAAT+AGG | + | chr7_3:52093622-52093641 | Msa1108820:three_prime_UTR | 25.0% |
| TTTGTAAATTGAACACGTCA+AGG | - | chr7_3:52089657-52089676 | None:intergenic | 30.0% | |
| TACAAATACAAAACCCTCAA+AGG | + | chr7_3:52089671-52089690 | Msa1108820:five_prime_UTR | 30.0% | |
| AAAAAAGAAGAGAATGAACC+TGG | - | chr7_3:52089862-52089881 | None:intergenic | 30.0% | |
| TAGATTGAGAAGCAAGTTTA+TGG | + | chr7_3:52089996-52090015 | Msa1108820:intron | 30.0% | |
| AGAAGCAAGTTTATGGTAAT+GGG | + | chr7_3:52090003-52090022 | Msa1108820:CDS | 30.0% | |
| !! | GGAATGAGGTTATTTGTTTT+TGG | + | chr7_3:52090456-52090475 | Msa1108820:intron | 30.0% |
| !!! | GTTTTTCTGATTTTAACTGG+AGG | + | chr7_3:52090515-52090534 | Msa1108820:CDS | 30.0% |
| GAAAAGAAACGACATATAGA+AGG | + | chr7_3:52090563-52090582 | Msa1108820:intron | 30.0% | |
| TTTGGACATTCAATGAATCT+AGG | + | chr7_3:52090711-52090730 | Msa1108820:intron | 30.0% | |
| GAAATTCAATCAGCATTATC+AGG | - | chr7_3:52090819-52090838 | None:intergenic | 30.0% | |
| CGGTGTTTGATATCTAATAA+CGG | + | chr7_3:52090951-52090970 | Msa1108820:intron | 30.0% | |
| !! | GTTGTTTCTTAGTGATATCA+TGG | + | chr7_3:52091362-52091381 | Msa1108820:intron | 30.0% |
| AATAAGTAAGTGTTTGTTCG+TGG | + | chr7_3:52091633-52091652 | Msa1108820:intron | 30.0% | |
| GAGTTTATAGACATGTCATA+AGG | + | chr7_3:52092043-52092062 | Msa1108820:intron | 30.0% | |
| ! | GAATTTCATCCAAAGTTGAT+TGG | + | chr7_3:52092444-52092463 | Msa1108820:intron | 30.0% |
| !! | CAACACTTTTTATCTCATCT+GGG | - | chr7_3:52092482-52092501 | None:intergenic | 30.0% |
| TTATTATATGAAGACAGCAG+AGG | + | chr7_3:52092518-52092537 | Msa1108820:CDS | 30.0% | |
| !!! | ATTTGGCTTTCACTTTTAAC+AGG | + | chr7_3:52092615-52092634 | Msa1108820:intron | 30.0% |
| TTTCACATTGTAATTGCTCT+TGG | + | chr7_3:52092817-52092836 | Msa1108820:intron | 30.0% | |
| TCAAATTCATAGACAGAAAC+TGG | - | chr7_3:52092849-52092868 | None:intergenic | 30.0% | |
| ! | CACATTTCTCACATTTGTTA+AGG | + | chr7_3:52093042-52093061 | Msa1108820:intron | 30.0% |
| AATTCTTTCCAGATACTTGA+TGG | + | chr7_3:52093369-52093388 | Msa1108820:intron | 30.0% | |
| ! | ATGGGATTTGTGAAGTTTTT+CGG | + | chr7_3:52093400-52093419 | Msa1108820:CDS | 30.0% |
| ! | CGAGCATGTTACTTATTATA+CGG | - | chr7_3:52093478-52093497 | None:intergenic | 30.0% |
| TAATTGACGTCATTGTTCAA+TGG | + | chr7_3:52093665-52093684 | Msa1108820:three_prime_UTR | 30.0% | |
| TTTGTAAATTGAACACGTCA+AGG | - | chr7_3:52089657-52089676 | None:intergenic | 30.0% | |
| TACAAATACAAAACCCTCAA+AGG | + | chr7_3:52089671-52089690 | Msa1108820:five_prime_UTR | 30.0% | |
| AAAAAAGAAGAGAATGAACC+TGG | - | chr7_3:52089862-52089881 | None:intergenic | 30.0% | |
| TAGATTGAGAAGCAAGTTTA+TGG | + | chr7_3:52089996-52090015 | Msa1108820:intron | 30.0% | |
| AGAAGCAAGTTTATGGTAAT+GGG | + | chr7_3:52090003-52090022 | Msa1108820:CDS | 30.0% | |
| !! | GGAATGAGGTTATTTGTTTT+TGG | + | chr7_3:52090456-52090475 | Msa1108820:intron | 30.0% |
| !!! | GTTTTTCTGATTTTAACTGG+AGG | + | chr7_3:52090515-52090534 | Msa1108820:CDS | 30.0% |
| GAAAAGAAACGACATATAGA+AGG | + | chr7_3:52090563-52090582 | Msa1108820:intron | 30.0% | |
| TTTGGACATTCAATGAATCT+AGG | + | chr7_3:52090711-52090730 | Msa1108820:intron | 30.0% | |
| GAAATTCAATCAGCATTATC+AGG | - | chr7_3:52090819-52090838 | None:intergenic | 30.0% | |
| CGGTGTTTGATATCTAATAA+CGG | + | chr7_3:52090951-52090970 | Msa1108820:intron | 30.0% | |
| !! | GTTGTTTCTTAGTGATATCA+TGG | + | chr7_3:52091362-52091381 | Msa1108820:intron | 30.0% |
| AATAAGTAAGTGTTTGTTCG+TGG | + | chr7_3:52091633-52091652 | Msa1108820:intron | 30.0% | |
| GAGTTTATAGACATGTCATA+AGG | + | chr7_3:52092043-52092062 | Msa1108820:intron | 30.0% | |
| ! | GAATTTCATCCAAAGTTGAT+TGG | + | chr7_3:52092444-52092463 | Msa1108820:intron | 30.0% |
| !! | CAACACTTTTTATCTCATCT+GGG | - | chr7_3:52092482-52092501 | None:intergenic | 30.0% |
| TTATTATATGAAGACAGCAG+AGG | + | chr7_3:52092518-52092537 | Msa1108820:CDS | 30.0% | |
| !!! | ATTTGGCTTTCACTTTTAAC+AGG | + | chr7_3:52092615-52092634 | Msa1108820:intron | 30.0% |
| TTTCACATTGTAATTGCTCT+TGG | + | chr7_3:52092817-52092836 | Msa1108820:intron | 30.0% | |
| TCAAATTCATAGACAGAAAC+TGG | - | chr7_3:52092849-52092868 | None:intergenic | 30.0% | |
| ! | CACATTTCTCACATTTGTTA+AGG | + | chr7_3:52093042-52093061 | Msa1108820:intron | 30.0% |
| AATTCTTTCCAGATACTTGA+TGG | + | chr7_3:52093369-52093388 | Msa1108820:intron | 30.0% | |
| ! | ATGGGATTTGTGAAGTTTTT+CGG | + | chr7_3:52093400-52093419 | Msa1108820:CDS | 30.0% |
| ! | CGAGCATGTTACTTATTATA+CGG | - | chr7_3:52093478-52093497 | None:intergenic | 30.0% |
| TAATTGACGTCATTGTTCAA+TGG | + | chr7_3:52093665-52093684 | Msa1108820:three_prime_UTR | 30.0% | |
| ATGAAGGTTTGAACCTTTGA+GGG | - | chr7_3:52089687-52089706 | None:intergenic | 35.0% | |
| AATGAAGGTTTGAACCTTTG+AGG | - | chr7_3:52089688-52089707 | None:intergenic | 35.0% | |
| CCATGTGTTTGATGAAATGA+AGG | - | chr7_3:52089703-52089722 | None:intergenic | 35.0% | |
| CCTTCATTTCATCAAACACA+TGG | + | chr7_3:52089700-52089719 | Msa1108820:exon | 35.0% | |
| GAGAAGCAAGTTTATGGTAA+TGG | + | chr7_3:52090002-52090021 | Msa1108820:CDS | 35.0% | |
| TCAAACAGTGATTCTGATTC+TGG | + | chr7_3:52090116-52090135 | Msa1108820:CDS | 35.0% | |
| AGTGATTCTGATTCTGGTAA+AGG | + | chr7_3:52090122-52090141 | Msa1108820:CDS | 35.0% | |
| GATTACCAAAAATCTCTTCG+CGG | + | chr7_3:52090179-52090198 | Msa1108820:intron | 35.0% | |
| !! | ACACTGACACTTTTGATTGA+AGG | + | chr7_3:52090241-52090260 | Msa1108820:intron | 35.0% |
| CACATGTTTCAGTATCATGT+CGG | - | chr7_3:52090272-52090291 | None:intergenic | 35.0% | |
| !! | TTTGAGTTGTACTTGGAATG+AGG | + | chr7_3:52090442-52090461 | Msa1108820:intron | 35.0% |
| !!! | TTTCTGATTTTAACTGGAGG+TGG | + | chr7_3:52090518-52090537 | Msa1108820:CDS | 35.0% |
| ! | TGAGTTAGTTGAGTGTTTTG+TGG | + | chr7_3:52090599-52090618 | Msa1108820:intron | 35.0% |
| GTGGATAAGATATATGCATG+TGG | + | chr7_3:52090618-52090637 | Msa1108820:intron | 35.0% | |
| !! | ATTAGTCTTTGCAGTTGTAG+CGG | - | chr7_3:52090903-52090922 | None:intergenic | 35.0% |
| AAAAACCAATTGACACGTCA+TGG | - | chr7_3:52091028-52091047 | None:intergenic | 35.0% | |
| TAATAAAGGGACAGGATCAT+AGG | - | chr7_3:52091165-52091184 | None:intergenic | 35.0% | |
| ! | CATGCCAAATCTTTGTTTCT+TGG | + | chr7_3:52091312-52091331 | Msa1108820:intron | 35.0% |
| ACCACCAAGAAACAAAGATT+TGG | - | chr7_3:52091319-52091338 | None:intergenic | 35.0% | |
| TGATGATTCGTAAGCTCAAA+TGG | - | chr7_3:52091493-52091512 | None:intergenic | 35.0% | |
| TTTGAGCTTACGAATCATCA+CGG | + | chr7_3:52091493-52091512 | Msa1108820:CDS | 35.0% | |
| TGTAACTGATAAGGACTTCA+TGG | + | chr7_3:52091522-52091541 | Msa1108820:CDS | 35.0% | |
| GTAACTGATAAGGACTTCAT+GGG | + | chr7_3:52091523-52091542 | Msa1108820:CDS | 35.0% | |
| ATAAGGACTTCATGGGTAAA+TGG | + | chr7_3:52091530-52091549 | Msa1108820:CDS | 35.0% | |
| TACTAACTTCTGTAGTTCCT+CGG | - | chr7_3:52091599-52091618 | None:intergenic | 35.0% | |
| ATTCACAAGAGATACATGTG+TGG | + | chr7_3:52091767-52091786 | Msa1108820:intron | 35.0% | |
| TTCACAAGAGATACATGTGT+GGG | + | chr7_3:52091768-52091787 | Msa1108820:intron | 35.0% | |
| ! | ATTGTTTTCACAGGCTATCA+TGG | + | chr7_3:52092019-52092038 | Msa1108820:intron | 35.0% |
| GGATCAACAGAGATAAAAAC+TGG | - | chr7_3:52092288-52092307 | None:intergenic | 35.0% | |
| CCAGTTAATCCAATCAACTT+TGG | - | chr7_3:52092456-52092475 | None:intergenic | 35.0% | |
| ! | CCAAAGTTGATTGGATTAAC+TGG | + | chr7_3:52092453-52092472 | Msa1108820:CDS | 35.0% |
| !! | GCAACACTTTTTATCTCATC+TGG | - | chr7_3:52092483-52092502 | None:intergenic | 35.0% |
| GATTTAACTACTCTAGATCG+AGG | - | chr7_3:52092790-52092809 | None:intergenic | 35.0% | |
| AATTAATCCCCATCATGTCA+AGG | + | chr7_3:52092953-52092972 | Msa1108820:intron | 35.0% | |
| ATTAATCCCCATCATGTCAA+GGG | + | chr7_3:52092954-52092973 | Msa1108820:intron | 35.0% | |
| ! | TCTCACATTTGTTAAGGACT+TGG | + | chr7_3:52093048-52093067 | Msa1108820:intron | 35.0% |
| ! | CTCACATTTGTTAAGGACTT+GGG | + | chr7_3:52093049-52093068 | Msa1108820:intron | 35.0% |
| !! | GAAAGAGAATCAGTTGATAG+AGG | - | chr7_3:52093258-52093277 | None:intergenic | 35.0% |
| ! | ACTTGCTGATGGAGTAATTA+AGG | + | chr7_3:52093444-52093463 | Msa1108820:CDS | 35.0% |
| !! | AAGAAGTACTACCAATAGCA+AGG | - | chr7_3:52093501-52093520 | None:intergenic | 35.0% |
| GTCATTGAATTTAGGCTTTG+TGG | + | chr7_3:52093539-52093558 | Msa1108820:three_prime_UTR | 35.0% | |
| ATGAAGGTTTGAACCTTTGA+GGG | - | chr7_3:52089687-52089706 | None:intergenic | 35.0% | |
| AATGAAGGTTTGAACCTTTG+AGG | - | chr7_3:52089688-52089707 | None:intergenic | 35.0% | |
| CCATGTGTTTGATGAAATGA+AGG | - | chr7_3:52089703-52089722 | None:intergenic | 35.0% | |
| CCTTCATTTCATCAAACACA+TGG | + | chr7_3:52089700-52089719 | Msa1108820:exon | 35.0% | |
| GAGAAGCAAGTTTATGGTAA+TGG | + | chr7_3:52090002-52090021 | Msa1108820:CDS | 35.0% | |
| TCAAACAGTGATTCTGATTC+TGG | + | chr7_3:52090116-52090135 | Msa1108820:CDS | 35.0% | |
| AGTGATTCTGATTCTGGTAA+AGG | + | chr7_3:52090122-52090141 | Msa1108820:CDS | 35.0% | |
| GATTACCAAAAATCTCTTCG+CGG | + | chr7_3:52090179-52090198 | Msa1108820:intron | 35.0% | |
| !! | ACACTGACACTTTTGATTGA+AGG | + | chr7_3:52090241-52090260 | Msa1108820:intron | 35.0% |
| CACATGTTTCAGTATCATGT+CGG | - | chr7_3:52090272-52090291 | None:intergenic | 35.0% | |
| !! | TTTGAGTTGTACTTGGAATG+AGG | + | chr7_3:52090442-52090461 | Msa1108820:intron | 35.0% |
| !!! | TTTCTGATTTTAACTGGAGG+TGG | + | chr7_3:52090518-52090537 | Msa1108820:CDS | 35.0% |
| ! | TGAGTTAGTTGAGTGTTTTG+TGG | + | chr7_3:52090599-52090618 | Msa1108820:intron | 35.0% |
| GTGGATAAGATATATGCATG+TGG | + | chr7_3:52090618-52090637 | Msa1108820:intron | 35.0% | |
| !! | ATTAGTCTTTGCAGTTGTAG+CGG | - | chr7_3:52090903-52090922 | None:intergenic | 35.0% |
| AAAAACCAATTGACACGTCA+TGG | - | chr7_3:52091028-52091047 | None:intergenic | 35.0% | |
| TAATAAAGGGACAGGATCAT+AGG | - | chr7_3:52091165-52091184 | None:intergenic | 35.0% | |
| ! | CATGCCAAATCTTTGTTTCT+TGG | + | chr7_3:52091312-52091331 | Msa1108820:intron | 35.0% |
| ACCACCAAGAAACAAAGATT+TGG | - | chr7_3:52091319-52091338 | None:intergenic | 35.0% | |
| TGATGATTCGTAAGCTCAAA+TGG | - | chr7_3:52091493-52091512 | None:intergenic | 35.0% | |
| TTTGAGCTTACGAATCATCA+CGG | + | chr7_3:52091493-52091512 | Msa1108820:CDS | 35.0% | |
| TGTAACTGATAAGGACTTCA+TGG | + | chr7_3:52091522-52091541 | Msa1108820:CDS | 35.0% | |
| GTAACTGATAAGGACTTCAT+GGG | + | chr7_3:52091523-52091542 | Msa1108820:CDS | 35.0% | |
| ATAAGGACTTCATGGGTAAA+TGG | + | chr7_3:52091530-52091549 | Msa1108820:CDS | 35.0% | |
| TACTAACTTCTGTAGTTCCT+CGG | - | chr7_3:52091599-52091618 | None:intergenic | 35.0% | |
| ATTCACAAGAGATACATGTG+TGG | + | chr7_3:52091767-52091786 | Msa1108820:intron | 35.0% | |
| TTCACAAGAGATACATGTGT+GGG | + | chr7_3:52091768-52091787 | Msa1108820:intron | 35.0% | |
| ! | ATTGTTTTCACAGGCTATCA+TGG | + | chr7_3:52092019-52092038 | Msa1108820:intron | 35.0% |
| GGATCAACAGAGATAAAAAC+TGG | - | chr7_3:52092288-52092307 | None:intergenic | 35.0% | |
| CCAGTTAATCCAATCAACTT+TGG | - | chr7_3:52092456-52092475 | None:intergenic | 35.0% | |
| ! | CCAAAGTTGATTGGATTAAC+TGG | + | chr7_3:52092453-52092472 | Msa1108820:CDS | 35.0% |
| !! | GCAACACTTTTTATCTCATC+TGG | - | chr7_3:52092483-52092502 | None:intergenic | 35.0% |
| GATTTAACTACTCTAGATCG+AGG | - | chr7_3:52092790-52092809 | None:intergenic | 35.0% | |
| AATTAATCCCCATCATGTCA+AGG | + | chr7_3:52092953-52092972 | Msa1108820:intron | 35.0% | |
| ATTAATCCCCATCATGTCAA+GGG | + | chr7_3:52092954-52092973 | Msa1108820:intron | 35.0% | |
| ! | TCTCACATTTGTTAAGGACT+TGG | + | chr7_3:52093048-52093067 | Msa1108820:intron | 35.0% |
| ! | CTCACATTTGTTAAGGACTT+GGG | + | chr7_3:52093049-52093068 | Msa1108820:intron | 35.0% |
| !! | GAAAGAGAATCAGTTGATAG+AGG | - | chr7_3:52093258-52093277 | None:intergenic | 35.0% |
| ! | ACTTGCTGATGGAGTAATTA+AGG | + | chr7_3:52093444-52093463 | Msa1108820:CDS | 35.0% |
| !! | AAGAAGTACTACCAATAGCA+AGG | - | chr7_3:52093501-52093520 | None:intergenic | 35.0% |
| GTCATTGAATTTAGGCTTTG+TGG | + | chr7_3:52093539-52093558 | Msa1108820:three_prime_UTR | 35.0% | |
| !!! | GTTGGTTTTGGTGGATATCA+TGG | - | chr7_3:52089729-52089748 | None:intergenic | 40.0% |
| GAAAGATGACGATAGAGTGA+TGG | - | chr7_3:52089827-52089846 | None:intergenic | 40.0% | |
| CTATCAGACGGTGGTTTATT+CGG | - | chr7_3:52090089-52090108 | None:intergenic | 40.0% | |
| GATGAATTACTATCAGACGG+TGG | - | chr7_3:52090098-52090117 | None:intergenic | 40.0% | |
| TCTGGTAAAGGAAAAGAGTC+TGG | + | chr7_3:52090134-52090153 | Msa1108820:CDS | 40.0% | |
| ! | CGGTGTGTATCTGAAACTAT+TGG | + | chr7_3:52090204-52090223 | Msa1108820:intron | 40.0% |
| !! | GTTCGGATTTGAGTTGTACT+TGG | + | chr7_3:52090435-52090454 | Msa1108820:intron | 40.0% |
| !!! | GATTTTAACTGGAGGTGGAT+TGG | + | chr7_3:52090523-52090542 | Msa1108820:CDS | 40.0% |
| ! | ACTAATCCCTTGAGCTTTGT+GGG | + | chr7_3:52090917-52090936 | Msa1108820:intron | 40.0% |
| ATATCAAACACCGCCCATTT+GGG | - | chr7_3:52090944-52090963 | None:intergenic | 40.0% | |
| TAATGCCATGACGTGTCAAT+TGG | + | chr7_3:52091020-52091039 | Msa1108820:intron | 40.0% | |
| ! | CAGGGTCAATTCTTGTTTGA+GGG | + | chr7_3:52091260-52091279 | Msa1108820:intron | 40.0% |
| ! | GCCAAATCTTTGTTTCTTGG+TGG | + | chr7_3:52091315-52091334 | Msa1108820:intron | 40.0% |
| TGTTTCAGAGGTAGTTAAGC+AGG | + | chr7_3:52091435-52091454 | Msa1108820:CDS | 40.0% | |
| GTTTCAGAGGTAGTTAAGCA+GGG | + | chr7_3:52091436-52091455 | Msa1108820:CDS | 40.0% | |
| TTGAGCTTACGAATCATCAC+GGG | + | chr7_3:52091494-52091513 | Msa1108820:CDS | 40.0% | |
| ACTAACTTCTGTAGTTCCTC+GGG | - | chr7_3:52091598-52091617 | None:intergenic | 40.0% | |
| GGGTTAGATGGCAATAATGA+TGG | + | chr7_3:52091795-52091814 | Msa1108820:intron | 40.0% | |
| TGAAGCTTCAAGTGCTTTGT+TGG | + | chr7_3:52091821-52091840 | Msa1108820:intron | 40.0% | |
| TGCATGAGTTGTCAGAACTT+AGG | + | chr7_3:52091894-52091913 | Msa1108820:intron | 40.0% | |
| TAACACCACTGAGACTGTTT+GGG | - | chr7_3:52092085-52092104 | None:intergenic | 40.0% | |
| TTAACACCACTGAGACTGTT+TGG | - | chr7_3:52092086-52092105 | None:intergenic | 40.0% | |
| GCTTTCTCATGTGGTCTTTA+AGG | - | chr7_3:52092146-52092165 | None:intergenic | 40.0% | |
| CACTAGTATGCTTTCTCATG+TGG | - | chr7_3:52092155-52092174 | None:intergenic | 40.0% | |
| ! | TCTCTTTTGTCTCCTTACAG+AGG | + | chr7_3:52092239-52092258 | Msa1108820:intron | 40.0% |
| TTCCAGATTTCTCCTCTGTA+AGG | - | chr7_3:52092254-52092273 | None:intergenic | 40.0% | |
| TTATCTCTGTTGATCCTGAG+AGG | + | chr7_3:52092292-52092311 | Msa1108820:CDS | 40.0% | |
| TATCTCTGTTGATCCTGAGA+GGG | + | chr7_3:52092293-52092312 | Msa1108820:CDS | 40.0% | |
| CAAGTGGCTGAATATGTCAA+AGG | + | chr7_3:52092327-52092346 | Msa1108820:CDS | 40.0% | |
| ! | CTCATGTTGGTTATTTGCTG+CGG | + | chr7_3:52092387-52092406 | Msa1108820:intron | 40.0% |
| !! | GAGATAGTATAGGTGTTGAC+TGG | + | chr7_3:52092645-52092664 | Msa1108820:intron | 40.0% |
| TACAAAGCTTACCCTTTGCA+TGG | - | chr7_3:52092925-52092944 | None:intergenic | 40.0% | |
| ATGCATTCCCTTGACATGAT+GGG | - | chr7_3:52092964-52092983 | None:intergenic | 40.0% | |
| TATGCATTCCCTTGACATGA+TGG | - | chr7_3:52092965-52092984 | None:intergenic | 40.0% | |
| TGTCTTACGTCAGCATATGT+TGG | + | chr7_3:52092997-52093016 | Msa1108820:intron | 40.0% | |
| ! | TGAGTTGAATTCCTACCAAC+TGG | - | chr7_3:52093024-52093043 | None:intergenic | 40.0% |
| AAATTGAGTCACAGCTCACA+GGG | - | chr7_3:52093162-52093181 | None:intergenic | 40.0% | |
| AACTTCACAAATCCCATGTC+AGG | - | chr7_3:52093397-52093416 | None:intergenic | 40.0% | |
| !!! | GTTGGTTTTGGTGGATATCA+TGG | - | chr7_3:52089729-52089748 | None:intergenic | 40.0% |
| GAAAGATGACGATAGAGTGA+TGG | - | chr7_3:52089827-52089846 | None:intergenic | 40.0% | |
| CTATCAGACGGTGGTTTATT+CGG | - | chr7_3:52090089-52090108 | None:intergenic | 40.0% | |
| GATGAATTACTATCAGACGG+TGG | - | chr7_3:52090098-52090117 | None:intergenic | 40.0% | |
| TCTGGTAAAGGAAAAGAGTC+TGG | + | chr7_3:52090134-52090153 | Msa1108820:CDS | 40.0% | |
| ! | CGGTGTGTATCTGAAACTAT+TGG | + | chr7_3:52090204-52090223 | Msa1108820:intron | 40.0% |
| !! | GTTCGGATTTGAGTTGTACT+TGG | + | chr7_3:52090435-52090454 | Msa1108820:intron | 40.0% |
| !!! | GATTTTAACTGGAGGTGGAT+TGG | + | chr7_3:52090523-52090542 | Msa1108820:CDS | 40.0% |
| ! | ACTAATCCCTTGAGCTTTGT+GGG | + | chr7_3:52090917-52090936 | Msa1108820:intron | 40.0% |
| ATATCAAACACCGCCCATTT+GGG | - | chr7_3:52090944-52090963 | None:intergenic | 40.0% | |
| TAATGCCATGACGTGTCAAT+TGG | + | chr7_3:52091020-52091039 | Msa1108820:intron | 40.0% | |
| ! | CAGGGTCAATTCTTGTTTGA+GGG | + | chr7_3:52091260-52091279 | Msa1108820:intron | 40.0% |
| ! | GCCAAATCTTTGTTTCTTGG+TGG | + | chr7_3:52091315-52091334 | Msa1108820:intron | 40.0% |
| TGTTTCAGAGGTAGTTAAGC+AGG | + | chr7_3:52091435-52091454 | Msa1108820:CDS | 40.0% | |
| GTTTCAGAGGTAGTTAAGCA+GGG | + | chr7_3:52091436-52091455 | Msa1108820:CDS | 40.0% | |
| TTGAGCTTACGAATCATCAC+GGG | + | chr7_3:52091494-52091513 | Msa1108820:CDS | 40.0% | |
| ACTAACTTCTGTAGTTCCTC+GGG | - | chr7_3:52091598-52091617 | None:intergenic | 40.0% | |
| GGGTTAGATGGCAATAATGA+TGG | + | chr7_3:52091795-52091814 | Msa1108820:intron | 40.0% | |
| TGAAGCTTCAAGTGCTTTGT+TGG | + | chr7_3:52091821-52091840 | Msa1108820:intron | 40.0% | |
| TGCATGAGTTGTCAGAACTT+AGG | + | chr7_3:52091894-52091913 | Msa1108820:intron | 40.0% | |
| TAACACCACTGAGACTGTTT+GGG | - | chr7_3:52092085-52092104 | None:intergenic | 40.0% | |
| TTAACACCACTGAGACTGTT+TGG | - | chr7_3:52092086-52092105 | None:intergenic | 40.0% | |
| GCTTTCTCATGTGGTCTTTA+AGG | - | chr7_3:52092146-52092165 | None:intergenic | 40.0% | |
| CACTAGTATGCTTTCTCATG+TGG | - | chr7_3:52092155-52092174 | None:intergenic | 40.0% | |
| ! | TCTCTTTTGTCTCCTTACAG+AGG | + | chr7_3:52092239-52092258 | Msa1108820:intron | 40.0% |
| TTCCAGATTTCTCCTCTGTA+AGG | - | chr7_3:52092254-52092273 | None:intergenic | 40.0% | |
| TTATCTCTGTTGATCCTGAG+AGG | + | chr7_3:52092292-52092311 | Msa1108820:CDS | 40.0% | |
| TATCTCTGTTGATCCTGAGA+GGG | + | chr7_3:52092293-52092312 | Msa1108820:CDS | 40.0% | |
| CAAGTGGCTGAATATGTCAA+AGG | + | chr7_3:52092327-52092346 | Msa1108820:CDS | 40.0% | |
| ! | CTCATGTTGGTTATTTGCTG+CGG | + | chr7_3:52092387-52092406 | Msa1108820:intron | 40.0% |
| !! | GAGATAGTATAGGTGTTGAC+TGG | + | chr7_3:52092645-52092664 | Msa1108820:intron | 40.0% |
| TACAAAGCTTACCCTTTGCA+TGG | - | chr7_3:52092925-52092944 | None:intergenic | 40.0% | |
| ATGCATTCCCTTGACATGAT+GGG | - | chr7_3:52092964-52092983 | None:intergenic | 40.0% | |
| TATGCATTCCCTTGACATGA+TGG | - | chr7_3:52092965-52092984 | None:intergenic | 40.0% | |
| TGTCTTACGTCAGCATATGT+TGG | + | chr7_3:52092997-52093016 | Msa1108820:intron | 40.0% | |
| ! | TGAGTTGAATTCCTACCAAC+TGG | - | chr7_3:52093024-52093043 | None:intergenic | 40.0% |
| AAATTGAGTCACAGCTCACA+GGG | - | chr7_3:52093162-52093181 | None:intergenic | 40.0% | |
| AACTTCACAAATCCCATGTC+AGG | - | chr7_3:52093397-52093416 | None:intergenic | 40.0% | |
| ! | AGAAGAGAGGAAGTGGGTTT+GGG | - | chr7_3:52089800-52089819 | None:intergenic | 45.0% |
| ! | AAGAAGAGAGGAAGTGGGTT+TGG | - | chr7_3:52089801-52089820 | None:intergenic | 45.0% |
| GGTGAAAGAAGAGAGGAAGT+GGG | - | chr7_3:52089806-52089825 | None:intergenic | 45.0% | |
| TGGTGAAAGAAGAGAGGAAG+TGG | - | chr7_3:52089807-52089826 | None:intergenic | 45.0% | |
| ! | GAGTGATGGTGAAAGAAGAG+AGG | - | chr7_3:52089813-52089832 | None:intergenic | 45.0% |
| CCAAAAATCTCTTCGCGGAT+CGG | + | chr7_3:52090184-52090203 | Msa1108820:intron | 45.0% | |
| TTGGTATTGTGTGTTGCAGC+CGG | + | chr7_3:52090475-52090494 | Msa1108820:intron | 45.0% | |
| ACAAAGCTCAACCAAGCAAC+CGG | - | chr7_3:52090497-52090516 | None:intergenic | 45.0% | |
| GACTAATCCCTTGAGCTTTG+TGG | + | chr7_3:52090916-52090935 | Msa1108820:intron | 45.0% | |
| GATATCAAACACCGCCCATT+TGG | - | chr7_3:52090945-52090964 | None:intergenic | 45.0% | |
| ! | GCAGGGTCAATTCTTGTTTG+AGG | + | chr7_3:52091259-52091278 | Msa1108820:intron | 45.0% |
| CGGGAAACGTGTAACTGATA+AGG | + | chr7_3:52091513-52091532 | Msa1108820:CDS | 45.0% | |
| AAGAGATACATGTGTGGGCT+TGG | + | chr7_3:52091773-52091792 | Msa1108820:intron | 45.0% | |
| AGAGATACATGTGTGGGCTT+GGG | + | chr7_3:52091774-52091793 | Msa1108820:intron | 45.0% | |
| ! | GTCAGAACTTAGGCACTGTT+TGG | + | chr7_3:52091904-52091923 | Msa1108820:intron | 45.0% |
| AGACTGTTTGGGAGAGCTTA+TGG | - | chr7_3:52092074-52092093 | None:intergenic | 45.0% | |
| ! | GTGGTCTTTAAGGACCTGTT+TGG | - | chr7_3:52092136-52092155 | None:intergenic | 45.0% |
| CTCCTTACAGAGGAGAAATC+TGG | + | chr7_3:52092249-52092268 | Msa1108820:intron | 45.0% | |
| TGTTCAACAGTATCCCTCTC+AGG | - | chr7_3:52092309-52092328 | None:intergenic | 45.0% | |
| GAGGGATACTGTTGAACAAG+TGG | + | chr7_3:52092311-52092330 | Msa1108820:CDS | 45.0% | |
| TGCATTCCCTTGACATGATG+GGG | - | chr7_3:52092963-52092982 | None:intergenic | 45.0% | |
| TCAGCATATGTTGGTCCAGT+TGG | + | chr7_3:52093006-52093025 | Msa1108820:intron | 45.0% | |
| CATATGTTGGTCCAGTTGGT+AGG | + | chr7_3:52093010-52093029 | Msa1108820:intron | 45.0% | |
| TGGGTTTCAATCTCCTTGTG+AGG | + | chr7_3:52093068-52093087 | Msa1108820:intron | 45.0% | |
| AGGCTCAGAAAACACCTACA+AGG | - | chr7_3:52093122-52093141 | None:intergenic | 45.0% | |
| ! | TAGGTGTTTTCTGAGCCTTG+AGG | + | chr7_3:52093124-52093143 | Msa1108820:intron | 45.0% |
| CAAATTGAGTCACAGCTCAC+AGG | - | chr7_3:52093163-52093182 | None:intergenic | 45.0% | |
| ! | ATACTTGATGGCACCTGACA+TGG | + | chr7_3:52093381-52093400 | Msa1108820:CDS | 45.0% |
| ! | TACTTGATGGCACCTGACAT+GGG | + | chr7_3:52093382-52093401 | Msa1108820:CDS | 45.0% |
| !! | GATGTTGACTCACTTGCTGA+TGG | + | chr7_3:52093433-52093452 | Msa1108820:CDS | 45.0% |
| ! | TAACATGCTCGCCTTGCTAT+TGG | + | chr7_3:52093487-52093506 | Msa1108820:exon | 45.0% |
| ! | AGAAGAGAGGAAGTGGGTTT+GGG | - | chr7_3:52089800-52089819 | None:intergenic | 45.0% |
| ! | AAGAAGAGAGGAAGTGGGTT+TGG | - | chr7_3:52089801-52089820 | None:intergenic | 45.0% |
| GGTGAAAGAAGAGAGGAAGT+GGG | - | chr7_3:52089806-52089825 | None:intergenic | 45.0% | |
| TGGTGAAAGAAGAGAGGAAG+TGG | - | chr7_3:52089807-52089826 | None:intergenic | 45.0% | |
| ! | GAGTGATGGTGAAAGAAGAG+AGG | - | chr7_3:52089813-52089832 | None:intergenic | 45.0% |
| CCAAAAATCTCTTCGCGGAT+CGG | + | chr7_3:52090184-52090203 | Msa1108820:intron | 45.0% | |
| TTGGTATTGTGTGTTGCAGC+CGG | + | chr7_3:52090475-52090494 | Msa1108820:intron | 45.0% | |
| ACAAAGCTCAACCAAGCAAC+CGG | - | chr7_3:52090497-52090516 | None:intergenic | 45.0% | |
| GACTAATCCCTTGAGCTTTG+TGG | + | chr7_3:52090916-52090935 | Msa1108820:intron | 45.0% | |
| GATATCAAACACCGCCCATT+TGG | - | chr7_3:52090945-52090964 | None:intergenic | 45.0% | |
| ! | GCAGGGTCAATTCTTGTTTG+AGG | + | chr7_3:52091259-52091278 | Msa1108820:intron | 45.0% |
| CGGGAAACGTGTAACTGATA+AGG | + | chr7_3:52091513-52091532 | Msa1108820:CDS | 45.0% | |
| AAGAGATACATGTGTGGGCT+TGG | + | chr7_3:52091773-52091792 | Msa1108820:intron | 45.0% | |
| AGAGATACATGTGTGGGCTT+GGG | + | chr7_3:52091774-52091793 | Msa1108820:intron | 45.0% | |
| ! | GTCAGAACTTAGGCACTGTT+TGG | + | chr7_3:52091904-52091923 | Msa1108820:intron | 45.0% |
| AGACTGTTTGGGAGAGCTTA+TGG | - | chr7_3:52092074-52092093 | None:intergenic | 45.0% | |
| ! | GTGGTCTTTAAGGACCTGTT+TGG | - | chr7_3:52092136-52092155 | None:intergenic | 45.0% |
| CTCCTTACAGAGGAGAAATC+TGG | + | chr7_3:52092249-52092268 | Msa1108820:intron | 45.0% | |
| TGTTCAACAGTATCCCTCTC+AGG | - | chr7_3:52092309-52092328 | None:intergenic | 45.0% | |
| GAGGGATACTGTTGAACAAG+TGG | + | chr7_3:52092311-52092330 | Msa1108820:CDS | 45.0% | |
| TGCATTCCCTTGACATGATG+GGG | - | chr7_3:52092963-52092982 | None:intergenic | 45.0% | |
| TCAGCATATGTTGGTCCAGT+TGG | + | chr7_3:52093006-52093025 | Msa1108820:intron | 45.0% | |
| CATATGTTGGTCCAGTTGGT+AGG | + | chr7_3:52093010-52093029 | Msa1108820:intron | 45.0% | |
| TGGGTTTCAATCTCCTTGTG+AGG | + | chr7_3:52093068-52093087 | Msa1108820:intron | 45.0% | |
| AGGCTCAGAAAACACCTACA+AGG | - | chr7_3:52093122-52093141 | None:intergenic | 45.0% | |
| ! | TAGGTGTTTTCTGAGCCTTG+AGG | + | chr7_3:52093124-52093143 | Msa1108820:intron | 45.0% |
| CAAATTGAGTCACAGCTCAC+AGG | - | chr7_3:52093163-52093182 | None:intergenic | 45.0% | |
| ! | ATACTTGATGGCACCTGACA+TGG | + | chr7_3:52093381-52093400 | Msa1108820:CDS | 45.0% |
| ! | TACTTGATGGCACCTGACAT+GGG | + | chr7_3:52093382-52093401 | Msa1108820:CDS | 45.0% |
| !! | GATGTTGACTCACTTGCTGA+TGG | + | chr7_3:52093433-52093452 | Msa1108820:CDS | 45.0% |
| ! | TAACATGCTCGCCTTGCTAT+TGG | + | chr7_3:52093487-52093506 | Msa1108820:exon | 45.0% |
| !! | TAATATAAGAAAATAATAAA+GGG | - | chr7_3:52091178-52091197 | None:intergenic | 5.0% |
| !! | ATAATATAAGAAAATAATAA+AGG | - | chr7_3:52091179-52091198 | None:intergenic | 5.0% |
| !! | TAATATAAGAAAATAATAAA+GGG | - | chr7_3:52091178-52091197 | None:intergenic | 5.0% |
| !! | ATAATATAAGAAAATAATAA+AGG | - | chr7_3:52091179-52091198 | None:intergenic | 5.0% |
| !!! | GTAGCGGAAGAGGTTGGTTT+TGG | - | chr7_3:52089741-52089760 | None:intergenic | 50.0% |
| ! | TGGGTTTGGGATTGCGAAGA+AGG | - | chr7_3:52089787-52089806 | None:intergenic | 50.0% |
| AGAAGAGAATGAACCTGGCG+AGG | - | chr7_3:52089857-52089876 | None:intergenic | 50.0% | |
| ! | AGACGGTGGTTTATTCGGTG+GGG | - | chr7_3:52090084-52090103 | None:intergenic | 50.0% |
| CAGACGGTGGTTTATTCGGT+GGG | - | chr7_3:52090085-52090104 | None:intergenic | 50.0% | |
| TCAGACGGTGGTTTATTCGG+TGG | - | chr7_3:52090086-52090105 | None:intergenic | 50.0% | |
| ! | CCGATCCGCGAAGAGATTTT+TGG | - | chr7_3:52090187-52090206 | None:intergenic | 50.0% |
| AGTCTTTGCAGTTGTAGCGG+AGG | - | chr7_3:52090900-52090919 | None:intergenic | 50.0% | |
| TTGGGTCCCACAAAGCTCAA+GGG | - | chr7_3:52090926-52090945 | None:intergenic | 50.0% | |
| TTTGGGTCCCACAAAGCTCA+AGG | - | chr7_3:52090927-52090946 | None:intergenic | 50.0% | |
| ! | TGAGCTTTGTGGGACCCAAA+TGG | + | chr7_3:52090927-52090946 | Msa1108820:intron | 50.0% |
| ! | GAGCTTTGTGGGACCCAAAT+GGG | + | chr7_3:52090928-52090947 | Msa1108820:intron | 50.0% |
| AGTTAAGCAGGGACCTTCTG+CGG | + | chr7_3:52091447-52091466 | Msa1108820:CDS | 50.0% | |
| GTTCCTCGGGACAGATATCT+GGG | - | chr7_3:52091585-52091604 | None:intergenic | 50.0% | |
| AGTTCCTCGGGACAGATATC+TGG | - | chr7_3:52091586-52091605 | None:intergenic | 50.0% | |
| GAGATACATGTGTGGGCTTG+GGG | + | chr7_3:52091775-52091794 | Msa1108820:intron | 50.0% | |
| GAAGACAGCAGAGGAAGACT+CGG | + | chr7_3:52092527-52092546 | Msa1108820:CDS | 50.0% | |
| TCTCCTTGTGAGGAACTCGT+TGG | + | chr7_3:52093078-52093097 | Msa1108820:intron | 50.0% | |
| TCACAGCTCACAGGGCTATA+GGG | - | chr7_3:52093154-52093173 | None:intergenic | 50.0% | |
| ! | GTCAGGTGCCATCAAGTATC+TGG | - | chr7_3:52093380-52093399 | None:intergenic | 50.0% |
| !!! | GTAGCGGAAGAGGTTGGTTT+TGG | - | chr7_3:52089741-52089760 | None:intergenic | 50.0% |
| ! | TGGGTTTGGGATTGCGAAGA+AGG | - | chr7_3:52089787-52089806 | None:intergenic | 50.0% |
| AGAAGAGAATGAACCTGGCG+AGG | - | chr7_3:52089857-52089876 | None:intergenic | 50.0% | |
| ! | AGACGGTGGTTTATTCGGTG+GGG | - | chr7_3:52090084-52090103 | None:intergenic | 50.0% |
| CAGACGGTGGTTTATTCGGT+GGG | - | chr7_3:52090085-52090104 | None:intergenic | 50.0% | |
| TCAGACGGTGGTTTATTCGG+TGG | - | chr7_3:52090086-52090105 | None:intergenic | 50.0% | |
| ! | CCGATCCGCGAAGAGATTTT+TGG | - | chr7_3:52090187-52090206 | None:intergenic | 50.0% |
| AGTCTTTGCAGTTGTAGCGG+AGG | - | chr7_3:52090900-52090919 | None:intergenic | 50.0% | |
| TTGGGTCCCACAAAGCTCAA+GGG | - | chr7_3:52090926-52090945 | None:intergenic | 50.0% | |
| TTTGGGTCCCACAAAGCTCA+AGG | - | chr7_3:52090927-52090946 | None:intergenic | 50.0% | |
| ! | TGAGCTTTGTGGGACCCAAA+TGG | + | chr7_3:52090927-52090946 | Msa1108820:intron | 50.0% |
| ! | GAGCTTTGTGGGACCCAAAT+GGG | + | chr7_3:52090928-52090947 | Msa1108820:intron | 50.0% |
| AGTTAAGCAGGGACCTTCTG+CGG | + | chr7_3:52091447-52091466 | Msa1108820:CDS | 50.0% | |
| GTTCCTCGGGACAGATATCT+GGG | - | chr7_3:52091585-52091604 | None:intergenic | 50.0% | |
| AGTTCCTCGGGACAGATATC+TGG | - | chr7_3:52091586-52091605 | None:intergenic | 50.0% | |
| GAGATACATGTGTGGGCTTG+GGG | + | chr7_3:52091775-52091794 | Msa1108820:intron | 50.0% | |
| GAAGACAGCAGAGGAAGACT+CGG | + | chr7_3:52092527-52092546 | Msa1108820:CDS | 50.0% | |
| TCTCCTTGTGAGGAACTCGT+TGG | + | chr7_3:52093078-52093097 | Msa1108820:intron | 50.0% | |
| TCACAGCTCACAGGGCTATA+GGG | - | chr7_3:52093154-52093173 | None:intergenic | 50.0% | |
| ! | GTCAGGTGCCATCAAGTATC+TGG | - | chr7_3:52093380-52093399 | None:intergenic | 50.0% |
| !!! | GCGGAAGAGGTTGGTTTTGG+TGG | - | chr7_3:52089738-52089757 | None:intergenic | 55.0% |
| ! | AGAAGCGTAGCGGAAGAGGT+TGG | - | chr7_3:52089747-52089766 | None:intergenic | 55.0% |
| ! | AGAGAGAGCGAGAAGCGTAG+CGG | - | chr7_3:52089757-52089776 | None:intergenic | 55.0% |
| TCTTTCACACCAACCTCGCC+AGG | + | chr7_3:52089841-52089860 | Msa1108820:CDS | 55.0% | |
| GAGAATGAACCTGGCGAGGT+TGG | - | chr7_3:52089853-52089872 | None:intergenic | 55.0% | |
| GGTCGTTGATGCTGCATCAG+AGG | + | chr7_3:52090024-52090043 | Msa1108820:CDS | 55.0% | |
| CTTTGTGGGACCCAAATGGG+CGG | + | chr7_3:52090931-52090950 | Msa1108820:intron | 55.0% | |
| GTTAAGCAGGGACCTTCTGC+GGG | + | chr7_3:52091448-52091467 | Msa1108820:CDS | 55.0% | |
| ! | ATCGCAGCTTTTCCCGCAGA+AGG | - | chr7_3:52091463-52091482 | None:intergenic | 55.0% |
| TCTGCGGGAAAAGCTGCGAT+TGG | + | chr7_3:52091463-52091482 | Msa1108820:CDS | 55.0% | |
| CTGCGGGAAAAGCTGCGATT+GGG | + | chr7_3:52091464-52091483 | Msa1108820:CDS | 55.0% | |
| TGCGGGAAAAGCTGCGATTG+GGG | + | chr7_3:52091465-52091484 | Msa1108820:CDS | 55.0% | |
| TGTGTGGGCTTGGGGTTAGA+TGG | + | chr7_3:52091783-52091802 | Msa1108820:intron | 55.0% | |
| GCTCTCCCAAACAGTCTCAG+TGG | + | chr7_3:52092077-52092096 | Msa1108820:intron | 55.0% | |
| CTGCCAACGAGTTCCTCACA+AGG | - | chr7_3:52093084-52093103 | None:intergenic | 55.0% | |
| CACAGCTCACAGGGCTATAG+GGG | - | chr7_3:52093153-52093172 | None:intergenic | 55.0% | |
| GTCACAGCTCACAGGGCTAT+AGG | - | chr7_3:52093155-52093174 | None:intergenic | 55.0% | |
| !!! | GCGGAAGAGGTTGGTTTTGG+TGG | - | chr7_3:52089738-52089757 | None:intergenic | 55.0% |
| ! | AGAAGCGTAGCGGAAGAGGT+TGG | - | chr7_3:52089747-52089766 | None:intergenic | 55.0% |
| ! | AGAGAGAGCGAGAAGCGTAG+CGG | - | chr7_3:52089757-52089776 | None:intergenic | 55.0% |
| TCTTTCACACCAACCTCGCC+AGG | + | chr7_3:52089841-52089860 | Msa1108820:CDS | 55.0% | |
| GAGAATGAACCTGGCGAGGT+TGG | - | chr7_3:52089853-52089872 | None:intergenic | 55.0% | |
| GGTCGTTGATGCTGCATCAG+AGG | + | chr7_3:52090024-52090043 | Msa1108820:CDS | 55.0% | |
| CTTTGTGGGACCCAAATGGG+CGG | + | chr7_3:52090931-52090950 | Msa1108820:intron | 55.0% | |
| GTTAAGCAGGGACCTTCTGC+GGG | + | chr7_3:52091448-52091467 | Msa1108820:CDS | 55.0% | |
| ! | ATCGCAGCTTTTCCCGCAGA+AGG | - | chr7_3:52091463-52091482 | None:intergenic | 55.0% |
| TCTGCGGGAAAAGCTGCGAT+TGG | + | chr7_3:52091463-52091482 | Msa1108820:CDS | 55.0% | |
| CTGCGGGAAAAGCTGCGATT+GGG | + | chr7_3:52091464-52091483 | Msa1108820:CDS | 55.0% | |
| TGCGGGAAAAGCTGCGATTG+GGG | + | chr7_3:52091465-52091484 | Msa1108820:CDS | 55.0% | |
| TGTGTGGGCTTGGGGTTAGA+TGG | + | chr7_3:52091783-52091802 | Msa1108820:intron | 55.0% | |
| GCTCTCCCAAACAGTCTCAG+TGG | + | chr7_3:52092077-52092096 | Msa1108820:intron | 55.0% | |
| CTGCCAACGAGTTCCTCACA+AGG | - | chr7_3:52093084-52093103 | None:intergenic | 55.0% | |
| CACAGCTCACAGGGCTATAG+GGG | - | chr7_3:52093153-52093172 | None:intergenic | 55.0% | |
| GTCACAGCTCACAGGGCTAT+AGG | - | chr7_3:52093155-52093174 | None:intergenic | 55.0% | |
| ! | AGCGAGAAGCGTAGCGGAAG+AGG | - | chr7_3:52089751-52089770 | None:intergenic | 60.0% |
| GTGTGTTGCAGCCGGTTGCT+TGG | + | chr7_3:52090483-52090502 | Msa1108820:intron | 60.0% | |
| GCGGGAAAAGCTGCGATTGG+GGG | + | chr7_3:52091466-52091485 | Msa1108820:CDS | 60.0% | |
| CTGCCCAGATATCTGTCCCG+AGG | + | chr7_3:52091579-52091598 | Msa1108820:CDS | 60.0% | |
| GGGCTATAGGGGAAGCCTCA+AGG | - | chr7_3:52093142-52093161 | None:intergenic | 60.0% | |
| ! | AGCGAGAAGCGTAGCGGAAG+AGG | - | chr7_3:52089751-52089770 | None:intergenic | 60.0% |
| GTGTGTTGCAGCCGGTTGCT+TGG | + | chr7_3:52090483-52090502 | Msa1108820:intron | 60.0% | |
| GCGGGAAAAGCTGCGATTGG+GGG | + | chr7_3:52091466-52091485 | Msa1108820:CDS | 60.0% | |
| CTGCCCAGATATCTGTCCCG+AGG | + | chr7_3:52091579-52091598 | Msa1108820:CDS | 60.0% | |
| GGGCTATAGGGGAAGCCTCA+AGG | - | chr7_3:52093142-52093161 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52089649 | 52093748 | 52089649 | ID=Msa1108820;Name=Msa1108820 |
| chr7_3 | mRNA | 52089649 | 52093748 | 52089649 | ID=Msa1108820-mRNA-1;Parent=Msa1108820;Name=Msa1108820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=70|0.66|0.71|1|1|1|7|259|305 |
| chr7_3 | exon | 52089649 | 52089862 | 52089649 | ID=Msa1108820-mRNA-1:exon:10828;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52089999 | 52090176 | 52089999 | ID=Msa1108820-mRNA-1:exon:10829;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52090494 | 52090544 | 52090494 | ID=Msa1108820-mRNA-1:exon:10830;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52091425 | 52091637 | 52091425 | ID=Msa1108820-mRNA-1:exon:10831;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52092259 | 52092348 | 52092259 | ID=Msa1108820-mRNA-1:exon:10832;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52092445 | 52092577 | 52092445 | ID=Msa1108820-mRNA-1:exon:10833;Parent=Msa1108820-mRNA-1 |
| chr7_3 | exon | 52093381 | 52093748 | 52093381 | ID=Msa1108820-mRNA-1:exon:10834;Parent=Msa1108820-mRNA-1 |
| chr7_3 | five_prime_UTR | 52089649 | 52089718 | 52089649 | ID=Msa1108820-mRNA-1:five_prime_utr;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52089719 | 52089862 | 52089719 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52089999 | 52090176 | 52089999 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52090494 | 52090544 | 52090494 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52091425 | 52091637 | 52091425 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52092259 | 52092348 | 52092259 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52092445 | 52092577 | 52092445 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | CDS | 52093381 | 52093489 | 52093381 | ID=Msa1108820-mRNA-1:cds;Parent=Msa1108820-mRNA-1 |
| chr7_3 | three_prime_UTR | 52093490 | 52093748 | 52093490 | ID=Msa1108820-mRNA-1:three_prime_utr;Parent=Msa1108820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
