Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525400 | XP_003602061.1 | 91.608 | 715 | 27 | 1 | 1 | 715 | 1 | 682 | 0.0 | 1358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525400 | sp|Q8GX69|BGA16_ARATH | 59.072 | 711 | 248 | 7 | 10 | 711 | 6 | 682 | 0.0 | 871 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525400 | G7J4Z9 | 91.608 | 715 | 27 | 1 | 1 | 715 | 1 | 682 | 0.0 | 1358 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004990 | Msa0525400 | 0.802929 | 4.443560e-49 | -8.615850e-47 |
Msa0005560 | Msa0525400 | 0.819805 | 9.578837e-53 | -8.615850e-47 |
Msa0011010 | Msa0525400 | 0.833280 | 5.839234e-56 | -8.615850e-47 |
Msa0011040 | Msa0525400 | 0.828218 | 1.015987e-54 | -8.615850e-47 |
Msa0012800 | Msa0525400 | 0.810855 | 9.366280e-51 | -8.615850e-47 |
Msa0015070 | Msa0525400 | 0.807634 | 4.592517e-50 | -8.615850e-47 |
Msa0021870 | Msa0525400 | 0.810073 | 1.381550e-50 | -8.615850e-47 |
Msa0024650 | Msa0525400 | 0.839683 | 1.368398e-57 | -8.615850e-47 |
Msa0025570 | Msa0525400 | 0.818450 | 1.947679e-52 | -8.615850e-47 |
Msa0025700 | Msa0525400 | 0.826069 | 3.320303e-54 | -8.615850e-47 |
Msa0036550 | Msa0525400 | 0.815691 | 8.121923e-52 | -8.615850e-47 |
Msa0038010 | Msa0525400 | 0.826240 | 3.024223e-54 | -8.615850e-47 |
Msa0043840 | Msa0525400 | 0.811708 | 6.114883e-51 | -8.615850e-47 |
Msa0046430 | Msa0525400 | 0.811063 | 8.441527e-51 | -8.615850e-47 |
Msa0048380 | Msa0525400 | 0.827487 | 1.522849e-54 | -8.615850e-47 |
Msa0053040 | Msa0525400 | 0.801497 | 8.758716e-49 | -8.615850e-47 |
Msa0054050 | Msa0525400 | 0.828817 | 7.279841e-55 | -8.615850e-47 |
Msa0072030 | Msa0525400 | 0.807852 | 4.128027e-50 | -8.615850e-47 |
Msa0073110 | Msa0525400 | 0.829334 | 5.456168e-55 | -8.615850e-47 |
Msa0090190 | Msa0525400 | 0.800077 | 1.706529e-48 | -8.615850e-47 |
Msa0090500 | Msa0525400 | 0.810440 | 1.151738e-50 | -8.615850e-47 |
Msa0095910 | Msa0525400 | 0.800837 | 1.194864e-48 | -8.615850e-47 |
Msa0098380 | Msa0525400 | 0.801041 | 1.085845e-48 | -8.615850e-47 |
Msa0099890 | Msa0525400 | 0.820073 | 8.314660e-53 | -8.615850e-47 |
Msa0111780 | Msa0525400 | 0.820069 | 8.334134e-53 | -8.615850e-47 |
Msa0115630 | Msa0525400 | 0.806631 | 7.490396e-50 | -8.615850e-47 |
Msa0120450 | Msa0525400 | 0.823662 | 1.227589e-53 | -8.615850e-47 |
Msa0121320 | Msa0525400 | 0.835351 | 1.765279e-56 | -8.615850e-47 |
Msa0125600 | Msa0525400 | 0.813349 | 2.677708e-51 | -8.615850e-47 |
Msa0132250 | Msa0525400 | 0.810699 | 1.012279e-50 | -8.615850e-47 |
Msa0136090 | Msa0525400 | 0.817027 | 4.079757e-52 | -8.615850e-47 |
Msa0137760 | Msa0525400 | 0.806755 | 7.052715e-50 | -8.615850e-47 |
Msa0137970 | Msa0525400 | 0.812677 | 3.758228e-51 | -8.615850e-47 |
Msa0143150 | Msa0525400 | 0.830412 | 2.979846e-55 | -8.615850e-47 |
Msa0163690 | Msa0525400 | 0.828494 | 8.712881e-55 | -8.615850e-47 |
Msa0166180 | Msa0525400 | 0.834006 | 3.845546e-56 | -8.615850e-47 |
Msa0175060 | Msa0525400 | 0.822487 | 2.306972e-53 | -8.615850e-47 |
Msa0176600 | Msa0525400 | 0.814454 | 1.527972e-51 | -8.615850e-47 |
Msa0177550 | Msa0525400 | 0.803703 | 3.071337e-49 | -8.615850e-47 |
Msa0182840 | Msa0525400 | 0.800759 | 1.239831e-48 | -8.615850e-47 |
Msa0206370 | Msa0525400 | 0.830687 | 2.552078e-55 | -8.615850e-47 |
Msa0235080 | Msa0525400 | 0.813991 | 1.934078e-51 | -8.615850e-47 |
Msa0366510 | Msa0525400 | 0.811063 | 8.444312e-51 | -8.615850e-47 |
Msa0374470 | Msa0525400 | 0.955009 | 8.111373e-113 | -8.615850e-47 |
Msa0374560 | Msa0525400 | 0.951250 | 3.034724e-109 | -8.615850e-47 |
Msa0374600 | Msa0525400 | 0.955118 | 6.322943e-113 | -8.615850e-47 |
Msa0386910 | Msa0525400 | 0.806080 | 9.784895e-50 | -8.615850e-47 |
Msa0396860 | Msa0525400 | 0.810379 | 1.187176e-50 | -8.615850e-47 |
Msa0401500 | Msa0525400 | 0.821134 | 4.744893e-53 | -8.615850e-47 |
Msa0405200 | Msa0525400 | 0.814586 | 1.428589e-51 | -8.615850e-47 |
Msa0409500 | Msa0525400 | 0.805663 | 1.197610e-49 | -8.615850e-47 |
Msa0414480 | Msa0525400 | 0.808859 | 2.518242e-50 | -8.615850e-47 |
Msa0415010 | Msa0525400 | 0.806486 | 8.034502e-50 | -8.615850e-47 |
Msa0418230 | Msa0525400 | 0.802324 | 5.923001e-49 | -8.615850e-47 |
Msa0423220 | Msa0525400 | 0.803008 | 4.279131e-49 | -8.615850e-47 |
Msa0423630 | Msa0525400 | 0.955877 | 1.097182e-113 | -8.615850e-47 |
Msa0425950 | Msa0525400 | 0.804297 | 2.311600e-49 | -8.615850e-47 |
Msa0433090 | Msa0525400 | 0.821759 | 3.403763e-53 | -8.615850e-47 |
Msa0444210 | Msa0525400 | 0.830725 | 2.497909e-55 | -8.615850e-47 |
Msa0448310 | Msa0525400 | 0.803399 | 3.551243e-49 | -8.615850e-47 |
Msa0449500 | Msa0525400 | 0.816419 | 5.583410e-52 | -8.615850e-47 |
Msa0464310 | Msa0525400 | 0.807042 | 6.131929e-50 | -8.615850e-47 |
Msa0470420 | Msa0525400 | 0.969238 | 7.870680e-130 | -8.615850e-47 |
Msa0472820 | Msa0525400 | 0.800002 | 1.767424e-48 | -8.615850e-47 |
Msa0244310 | Msa0525400 | 0.816842 | 4.490247e-52 | -8.615850e-47 |
Msa0247780 | Msa0525400 | 0.802707 | 4.936416e-49 | -8.615850e-47 |
Msa0258010 | Msa0525400 | 0.802819 | 4.681804e-49 | -8.615850e-47 |
Msa0260980 | Msa0525400 | 0.801852 | 7.405657e-49 | -8.615850e-47 |
Msa0269720 | Msa0525400 | 0.806583 | 7.667281e-50 | -8.615850e-47 |
Msa0278460 | Msa0525400 | 0.800719 | 1.263158e-48 | -8.615850e-47 |
Msa0278960 | Msa0525400 | 0.811556 | 6.599836e-51 | -8.615850e-47 |
Msa0279810 | Msa0525400 | 0.800453 | 1.430777e-48 | -8.615850e-47 |
Msa0282830 | Msa0525400 | 0.810706 | 1.008797e-50 | -8.615850e-47 |
Msa0321240 | Msa0525400 | 0.826814 | 2.206687e-54 | -8.615850e-47 |
Msa0336520 | Msa0525400 | 0.802928 | 4.444376e-49 | -8.615850e-47 |
Msa0336640 | Msa0525400 | 0.817443 | 3.288577e-52 | -8.615850e-47 |
Msa0348370 | Msa0525400 | 0.809637 | 1.714972e-50 | -8.615850e-47 |
Msa0349910 | Msa0525400 | 0.831404 | 1.702017e-55 | -8.615850e-47 |
Msa0354600 | Msa0525400 | 0.808943 | 2.415163e-50 | -8.615850e-47 |
Msa0354670 | Msa0525400 | 0.820397 | 7.010806e-53 | -8.615850e-47 |
Msa0356240 | Msa0525400 | 0.805032 | 1.623164e-49 | -8.615850e-47 |
Msa0356270 | Msa0525400 | 0.803166 | 3.968767e-49 | -8.615850e-47 |
Msa0357470 | Msa0525400 | 0.807558 | 4.766729e-50 | -8.615850e-47 |
Msa0357510 | Msa0525400 | 0.808733 | 2.679093e-50 | -8.615850e-47 |
Msa0357530 | Msa0525400 | 0.803024 | 4.245887e-49 | -8.615850e-47 |
Msa0487110 | Msa0525400 | 0.803821 | 2.902637e-49 | -8.615850e-47 |
Msa0489370 | Msa0525400 | 0.813198 | 2.889909e-51 | -8.615850e-47 |
Msa0490060 | Msa0525400 | 0.807261 | 5.510554e-50 | -8.615850e-47 |
Msa0491770 | Msa0525400 | 0.808221 | 3.444440e-50 | -8.615850e-47 |
Msa0491780 | Msa0525400 | 0.804791 | 1.823551e-49 | -8.615850e-47 |
Msa0497680 | Msa0525400 | 0.813945 | 1.979418e-51 | -8.615850e-47 |
Msa0523720 | Msa0525400 | 0.820162 | 7.936004e-53 | -8.615850e-47 |
Msa0524710 | Msa0525400 | 0.823232 | 1.547652e-53 | -8.615850e-47 |
Msa0525400 | Msa0530660 | 0.810482 | 1.127845e-50 | -8.615850e-47 |
Msa0525400 | Msa0531030 | 0.803492 | 3.396611e-49 | -8.615850e-47 |
Msa0525400 | Msa0531080 | 0.803700 | 3.076276e-49 | -8.615850e-47 |
Msa0525400 | Msa0540640 | 0.821688 | 3.535189e-53 | -8.615850e-47 |
Msa0525400 | Msa0549170 | 0.818603 | 1.798139e-52 | -8.615850e-47 |
Msa0525400 | Msa0561830 | 0.823729 | 1.184160e-53 | -8.615850e-47 |
Msa0525400 | Msa0562050 | 0.800999 | 1.107245e-48 | -8.615850e-47 |
Msa0525400 | Msa0567330 | 0.800733 | 1.255074e-48 | -8.615850e-47 |
Msa0525400 | Msa0567570 | 0.808949 | 2.409068e-50 | -8.615850e-47 |
Msa0525400 | Msa0576320 | 0.803498 | 3.387992e-49 | -8.615850e-47 |
Msa0525400 | Msa0584970 | 0.822517 | 2.271299e-53 | -8.615850e-47 |
Msa0525400 | Msa0587180 | 0.804301 | 2.306537e-49 | -8.615850e-47 |
Msa0525400 | Msa0587730 | 0.812765 | 3.596680e-51 | -8.615850e-47 |
Msa0525400 | Msa0587920 | 0.822114 | 2.817024e-53 | -8.615850e-47 |
Msa0525400 | Msa0597800 | 0.822869 | 1.879988e-53 | -8.615850e-47 |
Msa0525400 | Msa0597820 | 0.819537 | 1.102465e-52 | -8.615850e-47 |
Msa0525400 | Msa0602050 | 0.827975 | 1.162462e-54 | -8.615850e-47 |
Msa0525400 | Msa0604200 | 0.808964 | 2.391044e-50 | -8.615850e-47 |
Msa0525400 | Msa0604280 | 0.828567 | 8.367137e-55 | -8.615850e-47 |
Msa0525400 | Msa0614960 | 0.830594 | 2.690056e-55 | -8.615850e-47 |
Msa0525400 | Msa0616010 | 0.801901 | 7.236574e-49 | -8.615850e-47 |
Msa0525400 | Msa0622890 | 0.803203 | 3.898916e-49 | -8.615850e-47 |
Msa0525400 | Msa0626980 | 0.817421 | 3.326230e-52 | -8.615850e-47 |
Msa0525400 | Msa0627360 | 0.812220 | 4.731452e-51 | -8.615850e-47 |
Msa0525400 | Msa0643190 | 0.800107 | 1.683219e-48 | -8.615850e-47 |
Msa0525400 | Msa0645060 | 0.809785 | 1.593414e-50 | -8.615850e-47 |
Msa0525400 | Msa0645370 | 0.800095 | 1.692860e-48 | -8.615850e-47 |
Msa0525400 | Msa0647300 | 0.818993 | 1.466242e-52 | -8.615850e-47 |
Msa0525400 | Msa0652590 | 0.808633 | 2.813835e-50 | -8.615850e-47 |
Msa0525400 | Msa0655370 | 0.824224 | 9.064206e-54 | -8.615850e-47 |
Msa0525400 | Msa0667600 | 0.822619 | 2.150603e-53 | -8.615850e-47 |
Msa0525400 | Msa0671400 | 0.812379 | 4.366139e-51 | -8.615850e-47 |
Msa0525400 | Msa0673940 | 0.811986 | 5.321606e-51 | -8.615850e-47 |
Msa0525400 | Msa0686830 | 0.820146 | 8.000305e-53 | -8.615850e-47 |
Msa0525400 | Msa0689840 | 0.831679 | 1.456379e-55 | -8.615850e-47 |
Msa0525400 | Msa0699170 | 0.827172 | 1.811489e-54 | -8.615850e-47 |
Msa0525400 | Msa0715250 | 0.801522 | 8.655715e-49 | -8.615850e-47 |
Msa0525400 | Msa0716980 | 0.837112 | 6.299174e-57 | -8.615850e-47 |
Msa0525400 | Msa0717030 | 0.803045 | 4.204543e-49 | -8.615850e-47 |
Msa0525400 | Msa0718770 | 0.801380 | 9.252269e-49 | -8.615850e-47 |
Msa0525400 | Msa0727480 | 0.802580 | 5.244032e-49 | -8.615850e-47 |
Msa0525400 | Msa0750790 | 0.823406 | 1.409029e-53 | -8.615850e-47 |
Msa0525400 | Msa0750830 | 0.818393 | 2.006570e-52 | -8.615850e-47 |
Msa0525400 | Msa0751960 | 0.809407 | 1.921276e-50 | -8.615850e-47 |
Msa0525400 | Msa0758150 | 0.846737 | 1.799663e-59 | -8.615850e-47 |
Msa0525400 | Msa0773960 | 0.800092 | 1.694834e-48 | -8.615850e-47 |
Msa0525400 | Msa0787860 | 0.803679 | 3.107706e-49 | -8.615850e-47 |
Msa0525400 | Msa0794240 | 0.800804 | 1.213804e-48 | -8.615850e-47 |
Msa0525400 | Msa0798840 | 0.812498 | 4.113417e-51 | -8.615850e-47 |
Msa0525400 | Msa0799110 | 0.819482 | 1.135029e-52 | -8.615850e-47 |
Msa0525400 | Msa0799120 | 0.816828 | 4.521315e-52 | -8.615850e-47 |
Msa0525400 | Msa0802600 | 0.802122 | 6.518022e-49 | -8.615850e-47 |
Msa0525400 | Msa0806930 | 0.804949 | 1.689752e-49 | -8.615850e-47 |
Msa0525400 | Msa0812720 | 0.813904 | 2.020750e-51 | -8.615850e-47 |
Msa0525400 | Msa0814160 | 0.816675 | 4.894484e-52 | -8.615850e-47 |
Msa0525400 | Msa0816140 | 0.807917 | 3.999184e-50 | -8.615850e-47 |
Msa0525400 | Msa0817100 | 0.832780 | 7.774993e-56 | -8.615850e-47 |
Msa0525400 | Msa0824850 | 0.808253 | 3.390761e-50 | -8.615850e-47 |
Msa0525400 | Msa0831310 | 0.800222 | 1.594576e-48 | -8.615850e-47 |
Msa0525400 | Msa0833230 | 0.807151 | 5.815205e-50 | -8.615850e-47 |
Msa0525400 | Msa0847140 | 0.815646 | 8.308661e-52 | -8.615850e-47 |
Msa0525400 | Msa0851760 | 0.834908 | 2.283709e-56 | -8.615850e-47 |
Msa0525400 | Msa0853080 | 0.803563 | 3.284609e-49 | -8.615850e-47 |
Msa0525400 | Msa0854840 | 0.811228 | 7.774982e-51 | -8.615850e-47 |
Msa0525400 | Msa0863860 | 0.801342 | 9.421100e-49 | -8.615850e-47 |
Msa0525400 | Msa0864160 | 0.817085 | 3.958260e-52 | -8.615850e-47 |
Msa0525400 | Msa0867080 | 0.801197 | 1.008618e-48 | -8.615850e-47 |
Msa0525400 | Msa0869660 | 0.809845 | 1.547101e-50 | -8.615850e-47 |
Msa0525400 | Msa0871420 | 0.819957 | 8.838514e-53 | -8.615850e-47 |
Msa0525400 | Msa0886370 | 0.815009 | 1.151123e-51 | -8.615850e-47 |
Msa0525400 | Msa0890210 | 0.809468 | 1.864617e-50 | -8.615850e-47 |
Msa0525400 | Msa0896920 | 0.820895 | 5.385649e-53 | -8.615850e-47 |
Msa0525400 | Msa0896950 | 0.806440 | 8.216562e-50 | -8.615850e-47 |
Msa0525400 | Msa0910590 | 0.816587 | 5.120244e-52 | -8.615850e-47 |
Msa0525400 | Msa0921860 | 0.816755 | 4.695538e-52 | -8.615850e-47 |
Msa0525400 | Msa0936630 | 0.805319 | 1.414100e-49 | -8.615850e-47 |
Msa0525400 | Msa0948430 | 0.821451 | 4.010565e-53 | -8.615850e-47 |
Msa0525400 | Msa0950090 | 0.810287 | 1.242275e-50 | -8.615850e-47 |
Msa0525400 | Msa0970270 | 0.808390 | 3.171469e-50 | -8.615850e-47 |
Msa0525400 | Msa0973770 | 0.824348 | 8.474052e-54 | -8.615850e-47 |
Msa0525400 | Msa0985380 | 0.807834 | 4.164423e-50 | -8.615850e-47 |
Msa0525400 | Msa0987020 | 0.808790 | 2.604355e-50 | -8.615850e-47 |
Msa0525400 | Msa1006030 | 0.816896 | 4.365319e-52 | -8.615850e-47 |
Msa0525400 | Msa1007930 | 0.832035 | 1.189407e-55 | -8.615850e-47 |
Msa0525400 | Msa1024420 | 0.814418 | 1.556653e-51 | -8.615850e-47 |
Msa0525400 | Msa1024480 | 0.813688 | 2.255018e-51 | -8.615850e-47 |
Msa0525400 | Msa1029860 | 0.839790 | 1.283454e-57 | -8.615850e-47 |
Msa0525400 | Msa1031060 | 0.820104 | 8.179595e-53 | -8.615850e-47 |
Msa0525400 | Msa1037350 | 0.805744 | 1.151441e-49 | -8.615850e-47 |
Msa0525400 | Msa1040330 | 0.819128 | 1.366199e-52 | -8.615850e-47 |
Msa0525400 | Msa1041910 | 0.811125 | 8.187950e-51 | -8.615850e-47 |
Msa0525400 | Msa1048390 | 0.811782 | 5.894469e-51 | -8.615850e-47 |
Msa0525400 | Msa1049400 | 0.846369 | 2.267920e-59 | -8.615850e-47 |
Msa0525400 | Msa1061670 | 0.814474 | 1.512310e-51 | -8.615850e-47 |
Msa0525400 | Msa1062070 | 0.816333 | 5.837064e-52 | -8.615850e-47 |
Msa0525400 | Msa1066150 | 0.802678 | 5.005839e-49 | -8.615850e-47 |
Msa0525400 | Msa1068730 | 0.825591 | 4.313050e-54 | -8.615850e-47 |
Msa0525400 | Msa1071350 | 0.811757 | 5.966248e-51 | -8.615850e-47 |
Msa0525400 | Msa1084800 | 0.825204 | 5.323605e-54 | -8.615850e-47 |
Msa0525400 | Msa1085560 | 0.815817 | 7.612231e-52 | -8.615850e-47 |
Msa0525400 | Msa1085820 | 0.819186 | 1.325855e-52 | -8.615850e-47 |
Msa0525400 | Msa1099640 | 0.834311 | 3.224982e-56 | -8.615850e-47 |
Msa0525400 | Msa1099650 | 0.833566 | 4.954994e-56 | -8.615850e-47 |
Msa0525400 | Msa1100330 | 0.803178 | 3.945326e-49 | -8.615850e-47 |
Msa0525400 | Msa1103450 | 0.810164 | 1.320797e-50 | -8.615850e-47 |
Msa0525400 | Msa1106680 | 0.802084 | 6.635192e-49 | -8.615850e-47 |
Msa0525400 | Msa1106960 | 0.810505 | 1.114837e-50 | -8.615850e-47 |
Msa0525400 | Msa1107520 | 0.812332 | 4.472661e-51 | -8.615850e-47 |
Msa0525400 | Msa1108560 | 0.840025 | 1.114530e-57 | -8.615850e-47 |
Msa0525400 | Msa1115900 | 0.810780 | 9.724456e-51 | -8.615850e-47 |
Msa0525400 | Msa1119670 | 0.829432 | 5.164645e-55 | -8.615850e-47 |
Msa0525400 | Msa1120960 | 0.802856 | 4.600138e-49 | -8.615850e-47 |
Msa0525400 | Msa1123010 | 0.814063 | 1.864503e-51 | -8.615850e-47 |
Msa0525400 | Msa1124220 | 0.837257 | 5.784160e-57 | -8.615850e-47 |
Msa0525400 | Msa1136630 | 0.832863 | 7.416285e-56 | -8.615850e-47 |
Msa0525400 | Msa1143250 | 0.801644 | 8.171243e-49 | -8.615850e-47 |
Msa0525400 | Msa1147010 | 0.803213 | 3.881400e-49 | -8.615850e-47 |
Msa0525400 | Msa1150750 | 0.806078 | 9.793544e-50 | -8.615850e-47 |
Msa0525400 | Msa1160540 | 0.835543 | 1.578864e-56 | -8.615850e-47 |
Msa0525400 | Msa1164240 | 0.811309 | 7.467495e-51 | -8.615850e-47 |
Msa0525400 | Msa1165860 | 0.801311 | 9.558680e-49 | -8.615850e-47 |
Msa0525400 | Msa1167960 | 0.809118 | 2.215996e-50 | -8.615850e-47 |
Msa0525400 | Msa1181090 | 0.813685 | 2.258468e-51 | -8.615850e-47 |
Msa0525400 | Msa1183870 | 0.809988 | 1.441009e-50 | -8.615850e-47 |
Msa0525400 | Msa1186260 | 0.816025 | 6.840356e-52 | -8.615850e-47 |
Msa0525400 | Msa1187750 | 0.813252 | 2.812031e-51 | -8.615850e-47 |
Msa0525400 | Msa1191270 | 0.813427 | 2.574355e-51 | -8.615850e-47 |
Msa0525400 | Msa1201760 | 0.802920 | 4.460960e-49 | -8.615850e-47 |
Msa0525400 | Msa1220720 | 0.814899 | 1.217988e-51 | -8.615850e-47 |
Msa0525400 | Msa1223960 | 0.818497 | 1.901133e-52 | -8.615850e-47 |
Msa0525400 | Msa1223990 | 0.828685 | 7.835659e-55 | -8.615850e-47 |
Msa0525400 | Msa1241960 | 0.812111 | 4.995945e-51 | -8.615850e-47 |
Msa0525400 | Msa1255710 | 0.807337 | 5.309324e-50 | -8.615850e-47 |
Msa0525400 | Msa1259570 | 0.802593 | 5.213207e-49 | -8.615850e-47 |
Msa0525400 | Msa1263110 | 0.826111 | 3.245912e-54 | -8.615850e-47 |
Msa0525400 | Msa1263120 | 0.817229 | 3.674575e-52 | -8.615850e-47 |
Msa0525400 | Msa1265570 | 0.818648 | 1.756880e-52 | -8.615850e-47 |
Msa0525400 | Msa1269500 | 0.809847 | 1.545634e-50 | -8.615850e-47 |
Msa0525400 | Msa1273320 | 0.823148 | 1.618649e-53 | -8.615850e-47 |
Msa0525400 | Msa1280540 | 0.806256 | 8.985759e-50 | -8.615850e-47 |
Msa0525400 | Msa1322500 | 0.809584 | 1.760447e-50 | -8.615850e-47 |
Msa0525400 | Msa1334670 | 0.821079 | 4.885922e-53 | -8.615850e-47 |
Msa0525400 | Msa1338510 | 0.828953 | 6.748543e-55 | -8.615850e-47 |
Msa0525400 | Msa1343590 | 0.820274 | 7.478890e-53 | -8.615850e-47 |
Msa0525400 | Msa1349420 | 0.812981 | 3.225189e-51 | -8.615850e-47 |
Msa0525400 | Msa1355340 | 0.808189 | 3.500523e-50 | -8.615850e-47 |
Msa0525400 | Msa1357840 | 0.808963 | 2.391456e-50 | -8.615850e-47 |
Msa0525400 | Msa1364690 | 0.823240 | 1.541150e-53 | -8.615850e-47 |
Msa0525400 | Msa1365230 | 0.818314 | 2.091136e-52 | -8.615850e-47 |
Msa0525400 | Msa1368420 | 0.803125 | 4.047619e-49 | -8.615850e-47 |
Msa0525400 | Msa1377190 | 0.814534 | 1.466918e-51 | -8.615850e-47 |
Msa0525400 | Msa1378950 | 0.837199 | 5.983335e-57 | -8.615850e-47 |
Msa0525400 | Msa1383220 | 0.804071 | 2.576308e-49 | -8.615850e-47 |
Msa0525400 | Msa1386120 | 0.816764 | 4.673463e-52 | -8.615850e-47 |
Msa0525400 | Msa1395720 | 0.815358 | 9.630764e-52 | -8.615850e-47 |
Msa0525400 | Msa1407810 | 0.805923 | 1.055996e-49 | -8.615850e-47 |
Msa0525400 | Msa1417220 | 0.846166 | 2.576266e-59 | -8.615850e-47 |
Msa0525400 | Msa1421540 | 0.800841 | 1.192656e-48 | -8.615850e-47 |
Msa0525400 | Msa1427670 | 0.816690 | 4.855575e-52 | -8.615850e-47 |
Msa0525400 | Msa1434700 | 0.818271 | 2.138092e-52 | -8.615850e-47 |
Msa0525400 | Msa1437590 | 0.824323 | 8.591224e-54 | -8.615850e-47 |
Msa0525400 | Msa1437780 | 0.805932 | 1.051168e-49 | -8.615850e-47 |
Msa0525400 | Msa1445780 | 0.806168 | 9.375981e-50 | -8.615850e-47 |
Msa0525400 | Msa1458270 | 0.842501 | 2.488288e-58 | -8.615850e-47 |
Msa0525400 | Msa1461660 | 0.808341 | 3.248753e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525400 | MtrunA17_Chr3g0124931 | 91.608 | 715 | 27 | 1 | 1 | 715 | 1 | 682 | 0.0 | 1358 |
Msa0525400 | MtrunA17_Chr3g0130721 | 58.207 | 725 | 258 | 6 | 3 | 715 | 2 | 693 | 0.0 | 857 |
Msa0525400 | MtrunA17_Chr3g0145581 | 46.905 | 727 | 334 | 7 | 7 | 715 | 9 | 701 | 0.0 | 686 |
Msa0525400 | MtrunA17_Chr4g0037031 | 46.583 | 717 | 335 | 6 | 13 | 715 | 23 | 705 | 0.0 | 672 |
Msa0525400 | MtrunA17_Chr8g0342001 | 48.198 | 749 | 307 | 12 | 8 | 715 | 7 | 715 | 0.0 | 669 |
Msa0525400 | MtrunA17_Chr2g0299161 | 49.067 | 750 | 301 | 16 | 6 | 715 | 9 | 717 | 0.0 | 668 |
Msa0525400 | MtrunA17_Chr2g0330291 | 48.985 | 739 | 295 | 13 | 18 | 715 | 21 | 718 | 0.0 | 660 |
Msa0525400 | MtrunA17_Chr1g0152571 | 49.250 | 733 | 291 | 17 | 24 | 715 | 29 | 721 | 0.0 | 658 |
Msa0525400 | MtrunA17_Chr8g0372421 | 47.606 | 752 | 311 | 18 | 5 | 715 | 9 | 718 | 0.0 | 648 |
Msa0525400 | MtrunA17_Chr1g0155701 | 47.180 | 727 | 310 | 12 | 26 | 715 | 29 | 718 | 0.0 | 647 |
Msa0525400 | MtrunA17_Chr5g0404841 | 47.613 | 754 | 305 | 16 | 6 | 715 | 8 | 715 | 0.0 | 645 |
Msa0525400 | MtrunA17_Chr3g0142001 | 48.087 | 732 | 296 | 14 | 26 | 715 | 28 | 717 | 0.0 | 644 |
Msa0525400 | MtrunA17_Chr2g0326481 | 46.972 | 743 | 316 | 12 | 12 | 715 | 8 | 711 | 0.0 | 644 |
Msa0525400 | MtrunA17_Chr4g0029301 | 46.174 | 745 | 319 | 12 | 11 | 715 | 15 | 717 | 0.0 | 634 |
Msa0525400 | MtrunA17_Chr3g0130711 | 45.370 | 756 | 331 | 13 | 7 | 715 | 5 | 725 | 0.0 | 606 |
Msa0525400 | MtrunA17_Chr2g0301001 | 42.042 | 754 | 357 | 14 | 7 | 715 | 8 | 726 | 0.0 | 569 |
Msa0525400 | MtrunA17_Chr8g0378221 | 41.919 | 761 | 332 | 15 | 25 | 715 | 49 | 769 | 0.0 | 563 |
Msa0525400 | MtrunA17_Chr5g0406921 | 42.896 | 732 | 340 | 15 | 26 | 715 | 28 | 723 | 0.0 | 552 |
Msa0525400 | MtrunA17_Chr5g0408371 | 43.443 | 732 | 333 | 17 | 26 | 715 | 28 | 720 | 0.0 | 547 |
Msa0525400 | MtrunA17_Chr3g0077531 | 41.565 | 741 | 353 | 13 | 11 | 710 | 15 | 716 | 0.0 | 542 |
Msa0525400 | MtrunA17_Chr2g0326491 | 46.098 | 551 | 212 | 8 | 11 | 511 | 7 | 522 | 8.38e-162 | 477 |
Msa0525400 | MtrunA17_Chr2g0326441 | 52.848 | 316 | 114 | 2 | 11 | 326 | 7 | 287 | 2.30e-111 | 339 |
Msa0525400 | MtrunA17_Chr2g0326451 | 40.842 | 404 | 189 | 10 | 356 | 715 | 25 | 422 | 8.53e-80 | 265 |
Msa0525400 | MtrunA17_Chr5g0405781 | 41.743 | 218 | 100 | 2 | 178 | 395 | 21 | 211 | 9.26e-49 | 175 |
Msa0525400 | MtrunA17_Chr4g0071281 | 44.571 | 175 | 89 | 3 | 509 | 675 | 10 | 184 | 8.60e-33 | 127 |
Msa0525400 | MtrunA17_Chr2g0307981 | 32.911 | 237 | 141 | 5 | 486 | 710 | 59 | 289 | 8.45e-30 | 120 |
Msa0525400 | MtrunA17_Chr8g0372581 | 41.135 | 141 | 62 | 3 | 180 | 320 | 9 | 128 | 6.05e-24 | 98.2 |
Msa0525400 | MtrunA17_Chr2g0326521 | 34.597 | 211 | 80 | 7 | 537 | 715 | 1 | 185 | 2.53e-21 | 95.5 |
Msa0525400 | MtrunA17_Chr2g0330191 | 29.063 | 320 | 185 | 9 | 90 | 378 | 85 | 393 | 1.46e-19 | 93.6 |
Msa0525400 | MtrunA17_Chr4g0071291 | 40.179 | 112 | 57 | 3 | 112 | 219 | 42 | 147 | 1.76e-17 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0525400 | AT1G77410.1 | 59.072 | 711 | 248 | 7 | 10 | 711 | 6 | 682 | 0.0 | 871 |
Msa0525400 | AT1G77410.3 | 58.659 | 716 | 248 | 8 | 10 | 711 | 6 | 687 | 0.0 | 865 |
Msa0525400 | AT5G63800.1 | 56.407 | 718 | 271 | 4 | 7 | 715 | 13 | 697 | 0.0 | 835 |
Msa0525400 | AT1G77410.2 | 61.717 | 559 | 207 | 5 | 159 | 711 | 19 | 576 | 0.0 | 729 |
Msa0525400 | AT1G77410.4 | 61.717 | 559 | 207 | 5 | 159 | 711 | 19 | 576 | 0.0 | 729 |
Msa0525400 | AT3G13750.1 | 49.333 | 750 | 293 | 13 | 7 | 715 | 21 | 724 | 0.0 | 676 |
Msa0525400 | AT4G35010.1 | 47.863 | 702 | 316 | 8 | 26 | 712 | 41 | 707 | 0.0 | 673 |
Msa0525400 | AT4G26140.1 | 47.517 | 745 | 317 | 13 | 7 | 715 | 11 | 717 | 0.0 | 671 |
Msa0525400 | AT2G16730.1 | 46.733 | 704 | 321 | 8 | 26 | 712 | 44 | 710 | 0.0 | 667 |
Msa0525400 | AT3G52840.2 | 46.649 | 746 | 322 | 12 | 7 | 715 | 64 | 770 | 0.0 | 661 |
Msa0525400 | AT3G52840.1 | 46.649 | 746 | 322 | 12 | 7 | 715 | 10 | 716 | 0.0 | 660 |
Msa0525400 | AT4G26140.7 | 45.974 | 770 | 317 | 14 | 7 | 715 | 11 | 742 | 0.0 | 657 |
Msa0525400 | AT4G36360.2 | 47.004 | 751 | 312 | 15 | 7 | 715 | 17 | 723 | 0.0 | 650 |
Msa0525400 | AT4G36360.1 | 47.004 | 751 | 312 | 15 | 7 | 715 | 17 | 723 | 0.0 | 650 |
Msa0525400 | AT5G56870.1 | 47.012 | 753 | 306 | 16 | 8 | 715 | 11 | 715 | 0.0 | 647 |
Msa0525400 | AT1G45130.1 | 46.595 | 749 | 315 | 14 | 7 | 713 | 14 | 719 | 0.0 | 640 |
Msa0525400 | AT2G28470.2 | 46.883 | 738 | 308 | 14 | 23 | 715 | 23 | 721 | 0.0 | 637 |
Msa0525400 | AT2G28470.4 | 46.883 | 738 | 308 | 14 | 23 | 715 | 23 | 721 | 0.0 | 637 |
Msa0525400 | AT2G28470.1 | 46.883 | 738 | 308 | 14 | 23 | 715 | 29 | 727 | 0.0 | 636 |
Msa0525400 | AT2G28470.3 | 46.883 | 738 | 308 | 14 | 23 | 715 | 29 | 727 | 0.0 | 636 |
Msa0525400 | AT4G38590.1 | 48.217 | 645 | 310 | 10 | 89 | 714 | 1 | 640 | 0.0 | 632 |
Msa0525400 | AT4G26140.9 | 46.919 | 714 | 300 | 13 | 7 | 679 | 11 | 686 | 0.0 | 630 |
Msa0525400 | AT4G38590.2 | 47.894 | 641 | 314 | 9 | 89 | 714 | 69 | 704 | 0.0 | 627 |
Msa0525400 | AT5G63810.1 | 43.600 | 750 | 346 | 11 | 8 | 715 | 14 | 728 | 0.0 | 613 |
Msa0525400 | AT2G28470.5 | 48.296 | 675 | 287 | 13 | 25 | 676 | 31 | 666 | 0.0 | 611 |
Msa0525400 | AT2G32810.1 | 43.316 | 778 | 335 | 16 | 5 | 715 | 12 | 750 | 0.0 | 595 |
Msa0525400 | AT2G32810.2 | 43.316 | 778 | 335 | 16 | 5 | 715 | 12 | 750 | 0.0 | 595 |
Msa0525400 | AT4G26140.6 | 48.387 | 651 | 282 | 12 | 7 | 641 | 11 | 623 | 0.0 | 592 |
Msa0525400 | AT4G26140.3 | 48.387 | 651 | 280 | 12 | 7 | 641 | 11 | 621 | 0.0 | 589 |
Msa0525400 | AT4G26140.2 | 48.387 | 651 | 280 | 12 | 7 | 641 | 11 | 621 | 0.0 | 589 |
Msa0525400 | AT5G20710.1 | 40.212 | 756 | 376 | 12 | 1 | 715 | 3 | 723 | 0.0 | 564 |
Msa0525400 | AT1G31740.1 | 42.993 | 735 | 330 | 18 | 7 | 715 | 6 | 677 | 0.0 | 555 |
Msa0525400 | AT1G45130.2 | 47.170 | 636 | 286 | 12 | 120 | 713 | 13 | 640 | 0.0 | 554 |
Msa0525400 | AT4G26140.8 | 50.000 | 578 | 243 | 9 | 8 | 577 | 12 | 551 | 0.0 | 551 |
Msa0525400 | AT4G26140.4 | 47.927 | 603 | 243 | 10 | 8 | 577 | 12 | 576 | 0.0 | 537 |
Msa0525400 | AT4G26140.5 | 47.927 | 603 | 243 | 10 | 8 | 577 | 12 | 576 | 0.0 | 537 |
Msa0525400 | AT5G20710.2 | 36.346 | 520 | 288 | 11 | 237 | 715 | 1 | 518 | 1.19e-108 | 343 |
Msa0525400 | AT2G04060.1 | 32.213 | 357 | 172 | 8 | 326 | 676 | 23 | 315 | 4.64e-43 | 162 |
Msa0525400 | AT2G04062.1 | 33.495 | 206 | 83 | 3 | 26 | 231 | 7 | 158 | 1.37e-32 | 124 |
Msa0525400 | AT1G72990.3 | 28.989 | 376 | 223 | 9 | 90 | 435 | 39 | 400 | 2.64e-28 | 121 |
Msa0525400 | AT1G72990.2 | 28.989 | 376 | 223 | 9 | 90 | 435 | 32 | 393 | 2.82e-28 | 121 |
Msa0525400 | AT1G72990.1 | 28.989 | 376 | 223 | 9 | 90 | 435 | 94 | 455 | 4.66e-28 | 120 |
Msa0525400 | AT1G72990.4 | 28.989 | 376 | 223 | 9 | 90 | 435 | 94 | 455 | 4.66e-28 | 120 |
Find 193 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAGTATCGGCAAAATT+AGG | 0.136464 | 3_4:-78937745 | None:intergenic |
CACAGAATGTGCTGCCTTCT+TGG | 0.153848 | 3_4:+78937349 | Msa0525400:CDS |
GGCTTCAGGTTCACTCTAAA+AGG | 0.155139 | 3_4:+78940182 | Msa0525400:three_prime_UTR |
TTTCATCATGTTGACTATTT+TGG | 0.164006 | 3_4:-78935959 | None:intergenic |
AGAATTGATATACCATTATT+TGG | 0.180803 | 3_4:+78940161 | Msa0525400:three_prime_UTR |
ATTAGAATATGATATGATTT+TGG | 0.191650 | 3_4:+78934425 | Msa0525400:CDS |
AAGGGACTTGCTTGGGTTAA+TGG | 0.191945 | 3_4:+78939460 | Msa0525400:CDS |
GCAATGTGGGAGAAACTTTA+AGG | 0.207416 | 3_4:+78936458 | Msa0525400:CDS |
ACTATATGTGGTACACTTTC+AGG | 0.210126 | 3_4:+78937818 | Msa0525400:CDS |
TCATACAAACTTACGTGTTT+TGG | 0.226139 | 3_4:+78935200 | Msa0525400:CDS |
AGTTCAATTCAGCTGAAAAT+TGG | 0.226601 | 3_4:+78937701 | Msa0525400:CDS |
TCCTTAAGATGTCCCCATTT+TGG | 0.231023 | 3_4:-78937044 | None:intergenic |
AGTGCTTAACCTTGGTTCTA+TGG | 0.238870 | 3_4:+78939435 | Msa0525400:CDS |
GCCAAGGTATTGGACGATAT+TGG | 0.257316 | 3_4:+78939482 | Msa0525400:CDS |
GACATCTAATCCTCCTTCTT+TGG | 0.263463 | 3_4:-78935179 | None:intergenic |
TTTGAAGTCCCACGGCCATT+TGG | 0.264333 | 3_4:-78936192 | None:intergenic |
GTTTGGTTAGACAACCAAAA+TGG | 0.279707 | 3_4:+78937030 | Msa0525400:CDS |
ATATACCATTATTTGGCTTC+AGG | 0.292856 | 3_4:+78940168 | Msa0525400:three_prime_UTR |
TAATCCTCCTTCTTTGGCTT+TGG | 0.297718 | 3_4:-78935173 | None:intergenic |
TAAATGAAGGTTGGGTTGTT+AGG | 0.307229 | 3_4:+78938985 | Msa0525400:intron |
TATGAACAAGGCAACATTAT+AGG | 0.308128 | 3_4:-78936711 | None:intergenic |
ATTAATAGTTTACAAGCTTT+TGG | 0.309185 | 3_4:+78936653 | Msa0525400:intron |
ATTGAGAGTGAATGCACTTA+TGG | 0.315012 | 3_4:+78935617 | Msa0525400:CDS |
TTGAAGTCCCACGGCCATTT+GGG | 0.331347 | 3_4:-78936191 | None:intergenic |
TCCCACTGTTGCACTAAGTA+TGG | 0.332189 | 3_4:-78938310 | None:intergenic |
CTAAGAACAGATTGTGCATT+AGG | 0.335456 | 3_4:-78937977 | None:intergenic |
TTGAAGTATCGGCAAAATTA+GGG | 0.337323 | 3_4:-78937744 | None:intergenic |
GAAGGCTTGTTAGGAGAGTT+TGG | 0.344500 | 3_4:-78936483 | None:intergenic |
TTGGGCAGCCCAACGAATAT+AGG | 0.344539 | 3_4:-78936173 | None:intergenic |
ACCAAAATGGGGACATCTTA+AGG | 0.354053 | 3_4:+78937043 | Msa0525400:CDS |
CAAAGTAAGTTTCGAGAGAA+TGG | 0.355862 | 3_4:+78936145 | Msa0525400:CDS |
TAATTACTCATGGGGATATC+AGG | 0.358295 | 3_4:+78938714 | Msa0525400:CDS |
TGGGTTAATGGCCAAGGTAT+TGG | 0.361101 | 3_4:+78939472 | Msa0525400:CDS |
AGAGAAGTAGTAGCTGGGAT+TGG | 0.362007 | 3_4:+78934373 | Msa0525400:intron |
TCACTTCTAAATACAATTCC+AGG | 0.376793 | 3_4:-78935801 | None:intergenic |
CTATGGGAAAGGGACTTGCT+TGG | 0.378634 | 3_4:+78939452 | Msa0525400:CDS |
TAATTGTGGTTTCATTGCTC+TGG | 0.381958 | 3_4:-78937677 | None:intergenic |
GCTGTAGGGGTCTACCATTA+TGG | 0.382065 | 3_4:+78935766 | Msa0525400:intron |
TAAACCACTCACATGGTATC+AGG | 0.384274 | 3_4:+78939077 | Msa0525400:CDS |
CCAAGGTATTGGACGATATT+GGG | 0.385483 | 3_4:+78939483 | Msa0525400:CDS |
AATATTTCGTATGAATTGCC+TGG | 0.387602 | 3_4:+78937410 | Msa0525400:CDS |
TGTTGGTGAAATCAAAATCA+TGG | 0.389952 | 3_4:+78932245 | Msa0525400:exon |
ATGTAGATTGAGAATGAATA+TGG | 0.390011 | 3_4:+78936115 | Msa0525400:intron |
TAGTGGAAGGTTTGATTTAG+TGG | 0.394049 | 3_4:+78935535 | Msa0525400:CDS |
TGTTATACTTGAAGAAGAAC+CGG | 0.395839 | 3_4:+78940004 | Msa0525400:CDS |
TGTTCACAACCTCTACTTGA+TGG | 0.396063 | 3_4:+78937089 | Msa0525400:CDS |
AGTAGCTGGGATTGGGAGCT+TGG | 0.396438 | 3_4:+78934381 | Msa0525400:CDS |
CTTCTGCAGTATGAGTTTAG+TGG | 0.397314 | 3_4:+78935518 | Msa0525400:intron |
TATTCGTTGGGCTGCCCAAA+TGG | 0.400359 | 3_4:+78936177 | Msa0525400:CDS |
AGTGATTCCTAAGGGGTTCC+CGG | 0.401298 | 3_4:-78940023 | None:intergenic |
GTCCATAGTGAAGGCTTGTT+AGG | 0.404534 | 3_4:-78936492 | None:intergenic |
GTGAACCTGAAGCCAAATAA+TGG | 0.404548 | 3_4:-78940173 | None:intergenic |
TTATATGTGACCCTTCGAAT+TGG | 0.404622 | 3_4:+78935587 | Msa0525400:CDS |
AATTACTGAAATCTCTTCCT+TGG | 0.408801 | 3_4:-78938696 | None:intergenic |
TATGGGAAAGGGACTTGCTT+GGG | 0.409955 | 3_4:+78939453 | Msa0525400:CDS |
TTTGGTTAGACAACCAAAAT+GGG | 0.416446 | 3_4:+78937031 | Msa0525400:CDS |
CTTCACTATGGACAGAGAAT+TGG | 0.420589 | 3_4:+78936502 | Msa0525400:CDS |
TGGGCAGCCCAACGAATATA+GGG | 0.423176 | 3_4:-78936172 | None:intergenic |
GAGAAGTAGTAGCTGGGATT+GGG | 0.426493 | 3_4:+78934374 | Msa0525400:intron |
TTTACTCAAACCAGCAACTT+TGG | 0.427160 | 3_4:-78938665 | None:intergenic |
TTATGGTTACATGATGTTCC+TGG | 0.429910 | 3_4:+78935783 | Msa0525400:CDS |
AAAATGTCAATCTGATAAAC+GGG | 0.436199 | 3_4:+78938274 | Msa0525400:CDS |
TTTCTAGAGACCAAAGTTGC+TGG | 0.437416 | 3_4:+78938655 | Msa0525400:CDS |
TAGTGCAACAGTGGGATTGC+CGG | 0.437529 | 3_4:+78938317 | Msa0525400:CDS |
TTGAGAGTGAATGCACTTAT+GGG | 0.439807 | 3_4:+78935618 | Msa0525400:CDS |
CTCCTAACAAGCCTTCACTA+TGG | 0.444788 | 3_4:+78936490 | Msa0525400:CDS |
TTGGGCTGCCCAAATGGCCG+TGG | 0.445681 | 3_4:+78936183 | Msa0525400:CDS |
GAGAGACTGACCACTGGATC+AGG | 0.446416 | 3_4:-78936253 | None:intergenic |
GAGGCTCCACTGGATGAATA+TGG | 0.446906 | 3_4:+78936926 | Msa0525400:CDS |
AATTGGATTGTTACATCCCT+AGG | 0.447987 | 3_4:-78937383 | None:intergenic |
TAAACCTGGGATAGTATGAT+AGG | 0.451854 | 3_4:-78936012 | None:intergenic |
TGTTGTGAAGGAGTTCCATC+TGG | 0.453218 | 3_4:-78939520 | None:intergenic |
TGGGTTGCCCTATATTCGTT+GGG | 0.460338 | 3_4:+78936165 | Msa0525400:CDS |
GGAACATCATGTAACCATAA+TGG | 0.461861 | 3_4:-78935780 | None:intergenic |
AGTATTTCCTTTAGCTATAC+CGG | 0.464149 | 3_4:-78940229 | None:intergenic |
TAATATAGAGAAGTAGTAGC+TGG | 0.468042 | 3_4:+78934367 | Msa0525400:intron |
CGTTCTTTCCTAAAATCGAC+TGG | 0.470629 | 3_4:+78939972 | Msa0525400:CDS |
TCTGAAGCTGATCTCAAGTA+TGG | 0.472062 | 3_4:-78936683 | None:intergenic |
AAAGTAAGTTTCGAGAGAAT+GGG | 0.472636 | 3_4:+78936146 | Msa0525400:CDS |
ATGGGTTGCCCTATATTCGT+TGG | 0.474004 | 3_4:+78936164 | Msa0525400:CDS |
TTAATTTCCAAAGCCAAAGA+AGG | 0.474275 | 3_4:+78935166 | Msa0525400:CDS |
GTGCTTAACCTTGGTTCTAT+GGG | 0.476524 | 3_4:+78939436 | Msa0525400:CDS |
GACTTCAAACCGGTGTGCCT+TGG | 0.476862 | 3_4:+78936206 | Msa0525400:CDS |
GTGCATTCACTCTCAATGTA+TGG | 0.478471 | 3_4:-78935611 | None:intergenic |
TTGGCTTTGGAAATTAAGTC+AGG | 0.481878 | 3_4:-78935160 | None:intergenic |
CTTCTTCAAGTATAACAAGT+AGG | 0.483081 | 3_4:-78939998 | None:intergenic |
GCTTCAGGTTCACTCTAAAA+GGG | 0.485002 | 3_4:+78940183 | Msa0525400:three_prime_UTR |
AGAAGAACCGGGAACCCCTT+AGG | 0.485480 | 3_4:+78940016 | Msa0525400:CDS |
AGAACATCGTTGGTCATTAA+CGG | 0.485783 | 3_4:+78932351 | Msa0525400:CDS |
CCCAATATCGTCCAATACCT+TGG | 0.486272 | 3_4:-78939483 | None:intergenic |
GTTGGTGAAATCAAAATCAT+GGG | 0.486532 | 3_4:+78932246 | Msa0525400:exon |
AAGGAGTTCCATCTGGTTTG+TGG | 0.487600 | 3_4:-78939513 | None:intergenic |
CAATGTGGGAGAAACTTTAA+GGG | 0.489483 | 3_4:+78936459 | Msa0525400:CDS |
AACCTTGGTTCTATGGGAAA+GGG | 0.490035 | 3_4:+78939442 | Msa0525400:CDS |
GAGATTTCAGTAATTACTCA+TGG | 0.494226 | 3_4:+78938704 | Msa0525400:CDS |
GTAGCTGGGATTGGGAGCTT+GGG | 0.497169 | 3_4:+78934382 | Msa0525400:CDS |
TAACCTTGGTTCTATGGGAA+AGG | 0.497639 | 3_4:+78939441 | Msa0525400:CDS |
AGTGGAAGGTTTGATTTAGT+GGG | 0.498332 | 3_4:+78935536 | Msa0525400:CDS |
ATTAAAGAAATTCAAGCTCA+AGG | 0.500012 | 3_4:+78935563 | Msa0525400:CDS |
AAGTGATAATGATCAATTCA+AGG | 0.504392 | 3_4:+78935818 | Msa0525400:CDS |
GCTGCCTTCTTGGAAAATAG+TGG | 0.505645 | 3_4:+78937359 | Msa0525400:CDS |
GCCTTGTTCATAGCAAAGAA+AGG | 0.509544 | 3_4:+78936722 | Msa0525400:CDS |
TTATTATGATGAGGCTCCAC+TGG | 0.510643 | 3_4:+78936916 | Msa0525400:CDS |
GAACCAAGGTTAAGCACTAC+AGG | 0.511347 | 3_4:-78939430 | None:intergenic |
AGTGAATTGAACCAGAGAAA+AGG | 0.515748 | 3_4:-78932386 | None:intergenic |
AGTTGCTGGTTTGAGTAAAG+TGG | 0.516443 | 3_4:+78938669 | Msa0525400:CDS |
ATGGCCGTGGGACTTCAAAC+CGG | 0.524566 | 3_4:+78936196 | Msa0525400:CDS |
GTGTCTAGAGTGATTCCTAA+GGG | 0.526469 | 3_4:-78940031 | None:intergenic |
CTATCCTCGTAGCACTCCTC+AGG | 0.528740 | 3_4:+78932407 | Msa0525400:CDS |
AAGACTACATTCTTGCAGCC+TGG | 0.529766 | 3_4:-78937452 | None:intergenic |
CTACATTCTTGCAGCCTGGT+AGG | 0.536592 | 3_4:-78937448 | None:intergenic |
CTTGGAAAATAGTGGACCTA+GGG | 0.539564 | 3_4:+78937367 | Msa0525400:CDS |
GTGTCTCTTTGCACCGTCCA+TGG | 0.539794 | 3_4:+78932309 | Msa0525400:CDS |
TCACGAGCCTCAACAAGGCC+AGG | 0.541047 | 3_4:+78935228 | Msa0525400:CDS |
CAATGTATGGTCCAATTCGA+AGG | 0.542390 | 3_4:-78935598 | None:intergenic |
CTTGCTTGGGTTAATGGCCA+AGG | 0.543132 | 3_4:+78939466 | Msa0525400:CDS |
AAGATACATCTGACTATATG+TGG | 0.549097 | 3_4:+78937806 | Msa0525400:CDS |
AGATTTCAGTAATTACTCAT+GGG | 0.549878 | 3_4:+78938705 | Msa0525400:CDS |
ATATTTCGTATGAATTGCCT+GGG | 0.552300 | 3_4:+78937411 | Msa0525400:CDS |
AGGACCTATCATACTATCCC+AGG | 0.553587 | 3_4:+78936008 | Msa0525400:CDS |
ACCACATTCGATGCACCAGC+TGG | 0.554238 | 3_4:+78939400 | Msa0525400:CDS |
TGTGTCTAGAGTGATTCCTA+AGG | 0.556583 | 3_4:-78940032 | None:intergenic |
CAAGAAGGCAGCACATTCTG+TGG | 0.556669 | 3_4:-78937348 | None:intergenic |
AAGTTATGTCAATTATTACA+TGG | 0.562787 | 3_4:+78936745 | Msa0525400:CDS |
TCCTTTCTTTGCTATGAACA+AGG | 0.565995 | 3_4:-78936723 | None:intergenic |
AGAGCCACCGGTATAGCTAA+AGG | 0.566985 | 3_4:+78940222 | Msa0525400:three_prime_UTR |
AAGAATGTAGTCTTCAACAC+CGG | 0.567336 | 3_4:+78937461 | Msa0525400:CDS |
GCTGAATTGAACTTTAATTG+TGG | 0.567491 | 3_4:-78937691 | None:intergenic |
TCTTGGAAAATAGTGGACCT+AGG | 0.570208 | 3_4:+78937366 | Msa0525400:CDS |
CAACAATATGCAAGTTACAA+TGG | 0.571370 | 3_4:+78938248 | Msa0525400:CDS |
GAAACATACCATTGTTGTGA+AGG | 0.573167 | 3_4:-78939532 | None:intergenic |
TCTTACAAGCAAAGAGCCAC+CGG | 0.573249 | 3_4:+78940210 | Msa0525400:three_prime_UTR |
CTGTGAGCCTAAGCTGAAGG+TGG | 0.573454 | 3_4:-78937120 | None:intergenic |
TGGGCTGCCCAAATGGCCGT+GGG | 0.573977 | 3_4:+78936184 | Msa0525400:CDS |
CATGCAATGGCATGCAATGT+GGG | 0.574956 | 3_4:+78936445 | Msa0525400:CDS |
ACTCAAACCACCTTCAGCTT+AGG | 0.578526 | 3_4:+78937113 | Msa0525400:CDS |
TATCAAAATTAGTTCCTCCA+TGG | 0.578938 | 3_4:-78936865 | None:intergenic |
ACGAATTTGATGCAGTACCA+TGG | 0.579385 | 3_4:+78936848 | Msa0525400:intron |
TTGCAAATCTATTCAGTCAG+TGG | 0.580451 | 3_4:+78939015 | Msa0525400:CDS |
CGTAGGTAACATTGCCACCA+TGG | 0.581586 | 3_4:-78932326 | None:intergenic |
GATCCTGTAGTGCTTAACCT+TGG | 0.586671 | 3_4:+78939427 | Msa0525400:CDS |
TCCATACTTAGTGCAACAGT+GGG | 0.588438 | 3_4:+78938309 | Msa0525400:CDS |
TGCAGTATGAGTTTAGTGGA+AGG | 0.589406 | 3_4:+78935522 | Msa0525400:intron |
GGTAACATTGCCACCATGGA+CGG | 0.589509 | 3_4:-78932322 | None:intergenic |
ATTTCCAAAGCCAAAGAAGG+AGG | 0.589753 | 3_4:+78935169 | Msa0525400:CDS |
CAATTCTCTGTCCATAGTGA+AGG | 0.589841 | 3_4:-78936501 | None:intergenic |
GTTATACTTGAAGAAGAACC+GGG | 0.590256 | 3_4:+78940005 | Msa0525400:CDS |
GTATCTTTCCACAAACCAGA+TGG | 0.590713 | 3_4:+78939505 | Msa0525400:CDS |
AGGATACTGATTGATTTCCC+AGG | 0.591043 | 3_4:-78937428 | None:intergenic |
GAGGTTACCTGGCCTTGTTG+AGG | 0.591838 | 3_4:-78935235 | None:intergenic |
GTTTGAGTTCCATCAAGTAG+AGG | 0.592892 | 3_4:-78937098 | None:intergenic |
AATATAGAGAAGTAGTAGCT+GGG | 0.596698 | 3_4:+78934368 | Msa0525400:intron |
TACCTACGACAGAACATCGT+TGG | 0.596916 | 3_4:+78932341 | Msa0525400:CDS |
TTGCTGTGAGCCTAAGCTGA+AGG | 0.597462 | 3_4:-78937123 | None:intergenic |
ATGCAGATCAACGCATGCAA+TGG | 0.599303 | 3_4:+78936432 | Msa0525400:intron |
CTCCATACTTAGTGCAACAG+TGG | 0.602703 | 3_4:+78938308 | Msa0525400:CDS |
GTGGATCAAGTAAAGTTCAG+TGG | 0.607801 | 3_4:+78939034 | Msa0525400:CDS |
TTAACTGTAGGTTCTGCACA+TGG | 0.608812 | 3_4:+78938219 | Msa0525400:intron |
GCCAGCTGGTGCATCGAATG+TGG | 0.611606 | 3_4:-78939401 | None:intergenic |
ACTACAGGATCATTGCCAGC+TGG | 0.612769 | 3_4:-78939415 | None:intergenic |
AATAACAGCTTATTATGATG+AGG | 0.614024 | 3_4:+78936907 | Msa0525400:CDS |
TCTTGTTTACACATCATCCA+AGG | 0.616222 | 3_4:-78936223 | None:intergenic |
GATTTCAGTAATTACTCATG+GGG | 0.616447 | 3_4:+78938706 | Msa0525400:CDS |
ACCATACCATATTCATCCAG+TGG | 0.618114 | 3_4:-78936932 | None:intergenic |
GTTCTTAGTATATACAGTCA+AGG | 0.620590 | 3_4:+78937992 | Msa0525400:CDS |
TATTCGTATGACTGAACACA+GGG | 0.620744 | 3_4:-78940126 | None:intergenic |
ATTTCCTTTAGCTATACCGG+TGG | 0.628688 | 3_4:-78940226 | None:intergenic |
AAATCAATCAGTATCCTACC+AGG | 0.632250 | 3_4:+78937434 | Msa0525400:CDS |
AGCTGTTATTATGAAAGCAG+AGG | 0.636343 | 3_4:-78936894 | None:intergenic |
AGTATCGGCAAAATTAGGGA+TGG | 0.638859 | 3_4:-78937740 | None:intergenic |
TTGAGTAAAGTGGAAGTCCA+AGG | 0.642100 | 3_4:+78938679 | Msa0525400:CDS |
AAATCAAAATCATGGGAGAG+TGG | 0.642102 | 3_4:+78932253 | Msa0525400:exon |
AATGTATGGTCCAATTCGAA+GGG | 0.643269 | 3_4:-78935597 | None:intergenic |
TGTAGTCTTCAACACCGGCA+AGG | 0.643630 | 3_4:+78937466 | Msa0525400:CDS |
ATGGAACTCCTTCACAACAA+TGG | 0.646963 | 3_4:+78939524 | Msa0525400:CDS |
GTTCTTTCCTAAAATCGACT+GGG | 0.647340 | 3_4:+78939973 | Msa0525400:CDS |
TTATTCGTATGACTGAACAC+AGG | 0.648199 | 3_4:-78940127 | None:intergenic |
GTCCCTTTCCCATAGAACCA+AGG | 0.648226 | 3_4:-78939444 | None:intergenic |
CACACCGGTTTGAAGTCCCA+CGG | 0.651964 | 3_4:-78936200 | None:intergenic |
AGATGATGCTCCTGATCCAG+TGG | 0.653215 | 3_4:+78936243 | Msa0525400:CDS |
AATCTTCACGAGCCTCAACA+AGG | 0.655545 | 3_4:+78935223 | Msa0525400:CDS |
ACACATCATCCAAGGCACAC+CGG | 0.656038 | 3_4:-78936215 | None:intergenic |
GACCAACGATGTTCTGTCGT+AGG | 0.656925 | 3_4:-78932343 | None:intergenic |
GCATGCAATGGCATGCAATG+TGG | 0.659047 | 3_4:+78936444 | Msa0525400:CDS |
TCAAAATCATGGGAGAGTGG+TGG | 0.675828 | 3_4:+78932256 | Msa0525400:exon |
GCTCTACTAAACCACTCACA+TGG | 0.681185 | 3_4:+78939070 | Msa0525400:CDS |
TTGGTTAGACAACCAAAATG+GGG | 0.683195 | 3_4:+78937032 | Msa0525400:CDS |
TCTCTTTGCACCGTCCATGG+TGG | 0.685695 | 3_4:+78932312 | Msa0525400:CDS |
AATGTGGGAGAAACTTTAAG+GGG | 0.688593 | 3_4:+78936460 | Msa0525400:CDS |
TGTCTAGAGTGATTCCTAAG+GGG | 0.698523 | 3_4:-78940030 | None:intergenic |
ATTACCTGATACCATGTGAG+TGG | 0.707159 | 3_4:-78939081 | None:intergenic |
AATTTGATGCAGTACCATGG+AGG | 0.742597 | 3_4:+78936851 | Msa0525400:intron |
CGTACCTGAGGAGTGCTACG+AGG | 0.747266 | 3_4:-78932411 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAATTAAATAATAT+TGG | - | chr3_4:78933746-78933765 | None:intergenic | 0.0% |
!!! | AAGTTTTTTTTTTTTTTTTG+AGG | + | chr3_4:78932528-78932547 | Msa0525400:intron | 10.0% |
!! | TCATATATGATTAATAAATT+TGG | + | chr3_4:78932975-78932994 | Msa0525400:intron | 10.0% |
!! | TCATATTTGATTAATAAATT+TGG | + | chr3_4:78933078-78933097 | Msa0525400:intron | 10.0% |
!! | TAAAATAAAGAAAAAAGAAT+TGG | + | chr3_4:78932916-78932935 | Msa0525400:intron | 10.0% |
!! | TATTAGTTAAACTATATTAT+CGG | + | chr3_4:78933604-78933623 | Msa0525400:intron | 10.0% |
!! | AAATAATTAAATAATATTGG+AGG | - | chr3_4:78933743-78933762 | None:intergenic | 10.0% |
!! | AATTTGATATGTTAATATTT+GGG | + | chr3_4:78938182-78938201 | Msa0525400:intron | 10.0% |
!! | TTTCGTTAAAAAAATATTTA+CGG | + | chr3_4:78939344-78939363 | Msa0525400:intron | 10.0% |
!! | TCACATATGAAAAATAAATT+TGG | + | chr3_4:78932872-78932891 | Msa0525400:intron | 15.0% |
!!! | AAAAGAATTGGTTTTTTTTA+AGG | + | chr3_4:78933133-78933152 | Msa0525400:intron | 15.0% |
!!! | TAAAATTAAGTCATAGTTTT+TGG | - | chr3_4:78933190-78933209 | None:intergenic | 15.0% |
!! | GTATACTTCATAAATAAAAT+TGG | - | chr3_4:78933364-78933383 | None:intergenic | 15.0% |
!! | ATTAGTTAAACTATATTATC+GGG | + | chr3_4:78933605-78933624 | Msa0525400:intron | 15.0% |
!! | TGATATATATAACTAACAAT+TGG | - | chr3_4:78933644-78933663 | None:intergenic | 15.0% |
!! | CGATATTATTAATTAAGATT+AGG | + | chr3_4:78933680-78933699 | Msa0525400:intron | 15.0% |
!! | AAGGAAAAAAAAACTTTATA+AGG | + | chr3_4:78933806-78933825 | Msa0525400:intron | 15.0% |
!! | AGGAAAAAAAAACTTTATAA+GGG | + | chr3_4:78933807-78933826 | Msa0525400:intron | 15.0% |
!!! | ATTAGAATATGATATGATTT+TGG | + | chr3_4:78934425-78934444 | Msa0525400:CDS | 15.0% |
!! | TCTAATGGTTAAAAAAAAAT+TGG | + | chr3_4:78934654-78934673 | Msa0525400:intron | 15.0% |
!!! | TTACATAATTTGTATGAATT+TGG | + | chr3_4:78935017-78935036 | Msa0525400:intron | 15.0% |
!!! | ATATTTGAAATTGTTTTTGT+TGG | + | chr3_4:78936069-78936088 | Msa0525400:intron | 15.0% |
!! | CAATTTGATATGTTAATATT+TGG | + | chr3_4:78938181-78938200 | Msa0525400:intron | 15.0% |
!!! | TAATTTTTGTAACTTATTAG+TGG | - | chr3_4:78938399-78938418 | None:intergenic | 15.0% |
!!! | AGATTATCTATGAATTTTTT+AGG | - | chr3_4:78939143-78939162 | None:intergenic | 15.0% |
!! | AAAAAATTCATAGATAATCT+TGG | + | chr3_4:78939143-78939162 | Msa0525400:intron | 15.0% |
!!! | TAATTTTCTATTTTTCTTCA+CGG | + | chr3_4:78939855-78939874 | Msa0525400:intron | 15.0% |
!!! | TTATTGTATGTTTTTAAAGC+TGG | + | chr3_4:78932620-78932639 | Msa0525400:intron | 20.0% |
!! | GTTATATTTCTTACCTAATA+AGG | - | chr3_4:78932722-78932741 | None:intergenic | 20.0% |
!!! | GTTTTATAATTCATTCAAGA+TGG | - | chr3_4:78932755-78932774 | None:intergenic | 20.0% |
!!! | TTCTTATGTTTTATCATTGA+TGG | + | chr3_4:78933422-78933441 | Msa0525400:intron | 20.0% |
!!! | CTAATTTTATATGTTTCACA+TGG | + | chr3_4:78933483-78933502 | Msa0525400:intron | 20.0% |
!! | AATTAAAAACTCTTTCTCAA+GGG | - | chr3_4:78933514-78933533 | None:intergenic | 20.0% |
!! | TAATTAAAAACTCTTTCTCA+AGG | - | chr3_4:78933515-78933534 | None:intergenic | 20.0% |
!! | ATTCACATAATTTCAGAAAA+AGG | - | chr3_4:78933571-78933590 | None:intergenic | 20.0% |
!! | TTAGTTAAACTATATTATCG+GGG | + | chr3_4:78933606-78933625 | Msa0525400:intron | 20.0% |
!!! | ATATGATATGATTTTGGTTT+TGG | + | chr3_4:78934431-78934450 | Msa0525400:CDS | 20.0% |
!!! | TATGATATGATTTTGGTTTT+GGG | + | chr3_4:78934432-78934451 | Msa0525400:CDS | 20.0% |
!!! | ATCATCTTTTCTATAAAAGA+AGG | + | chr3_4:78934822-78934841 | Msa0525400:intron | 20.0% |
!!! | ATTTTTAAGTAATACTCGAT+TGG | - | chr3_4:78934878-78934897 | None:intergenic | 20.0% |
!! | CAAATTATCTTGATATATGT+AGG | + | chr3_4:78934966-78934985 | Msa0525400:intron | 20.0% |
!!! | GTCATTTTGAAGAATTATTT+CGG | - | chr3_4:78934994-78935013 | None:intergenic | 20.0% |
!! | ATGCATAATGACATAAATAT+TGG | - | chr3_4:78935083-78935102 | None:intergenic | 20.0% |
!! | ACAATTTCAAATATTTGTAC+TGG | - | chr3_4:78936063-78936082 | None:intergenic | 20.0% |
!!! | TAAAAGAAAAACTGCAATTT+TGG | - | chr3_4:78936568-78936587 | None:intergenic | 20.0% |
!!! | ATTAATAGTTTACAAGCTTT+TGG | + | chr3_4:78936653-78936672 | Msa0525400:intron | 20.0% |
!! | AAGTTATGTCAATTATTACA+TGG | + | chr3_4:78936745-78936764 | Msa0525400:CDS | 20.0% |
!! | ACTAGTACTACTTAAATAAA+AGG | + | chr3_4:78937196-78937215 | Msa0525400:intron | 20.0% |
!!! | CATACGAAATATTTTGAAAT+TGG | - | chr3_4:78937403-78937422 | None:intergenic | 20.0% |
!! | ATAAAATTTAGTGAAACTGA+AGG | + | chr3_4:78937608-78937627 | Msa0525400:intron | 20.0% |
!! | TATCAAATTGTACAATAGAA+AGG | - | chr3_4:78938171-78938190 | None:intergenic | 20.0% |
!! | AAAAATGTCAATCTGATAAA+CGG | + | chr3_4:78938273-78938292 | Msa0525400:CDS | 20.0% |
!!! | TGTAATCCATAATCTTATTT+TGG | - | chr3_4:78938595-78938614 | None:intergenic | 20.0% |
!!! | GATGTAGAATTTTTAAATGA+AGG | + | chr3_4:78938972-78938991 | Msa0525400:intron | 20.0% |
!!! | TAGAATTTTTAAATGAAGGT+TGG | + | chr3_4:78938976-78938995 | Msa0525400:intron | 20.0% |
!!! | AGAATTTTTAAATGAAGGTT+GGG | + | chr3_4:78938977-78938996 | Msa0525400:intron | 20.0% |
!!! | GAATTTTTTAGGAAAGATAA+TGG | - | chr3_4:78939132-78939151 | None:intergenic | 20.0% |
!! | ACTAATATTTATTTACGTGT+TGG | + | chr3_4:78939370-78939389 | Msa0525400:intron | 20.0% |
!! | CTAATATTTATTTACGTGTT+GGG | + | chr3_4:78939371-78939390 | Msa0525400:intron | 20.0% |
!! | TAAACATTCTACATATTTCA+TGG | - | chr3_4:78939636-78939655 | None:intergenic | 20.0% |
!!! | CAACTGATATTTTTTTATTC+AGG | + | chr3_4:78939937-78939956 | Msa0525400:intron | 20.0% |
!! | AGAATTGATATACCATTATT+TGG | + | chr3_4:78940161-78940180 | Msa0525400:three_prime_UTR | 20.0% |
!!! | GAAACATTCTTTACTTTTGT+TGG | + | chr3_4:78932228-78932247 | Msa0525400:five_prime_UTR | 25.0% |
!!! | CATATATATCCTGTGTTTTT+TGG | + | chr3_4:78932441-78932460 | Msa0525400:intron | 25.0% |
!!! | TCTTTTAGAAAAGAGTAAAG+TGG | - | chr3_4:78932577-78932596 | None:intergenic | 25.0% |
! | AACATATGTAAGAAAAAGAG+AGG | + | chr3_4:78932660-78932679 | Msa0525400:intron | 25.0% |
! | TTATTCTCATTGTCCTTATT+AGG | + | chr3_4:78932706-78932725 | Msa0525400:intron | 25.0% |
! | TTATAATTCATTCAAGATGG+AGG | - | chr3_4:78932752-78932771 | None:intergenic | 25.0% |
!!! | AATTAAGTCATAGTTTTTGG+AGG | - | chr3_4:78933187-78933206 | None:intergenic | 25.0% |
! | TTACAATAATGTGTGTAACA+TGG | + | chr3_4:78933334-78933353 | Msa0525400:intron | 25.0% |
! | TACAATAATGTGTGTAACAT+GGG | + | chr3_4:78933335-78933354 | Msa0525400:intron | 25.0% |
!! | TTTAATTTCTCAGTGAATCT+AGG | + | chr3_4:78933713-78933732 | Msa0525400:intron | 25.0% |
!! | AATAACGTGTAGCATATTTT+TGG | + | chr3_4:78933852-78933871 | Msa0525400:intron | 25.0% |
!! | TTTCACAGGTTCATTTTAAA+CGG | - | chr3_4:78933910-78933929 | None:intergenic | 25.0% |
! | AAATGAACCTGTGAAAATAT+TGG | + | chr3_4:78933914-78933933 | Msa0525400:intron | 25.0% |
! | AGAGGGTAATTAAAATTTCA+CGG | - | chr3_4:78934159-78934178 | None:intergenic | 25.0% |
!!! | ATGGCTTTTTGTTATCATTT+TGG | + | chr3_4:78934245-78934264 | Msa0525400:intron | 25.0% |
!!! | ATTTTGGTTTTGGGTTTTTT+GGG | + | chr3_4:78934441-78934460 | Msa0525400:CDS | 25.0% |
!! | TGGTAACTGATTTAATCTAA+TGG | + | chr3_4:78934639-78934658 | Msa0525400:intron | 25.0% |
! | AAAAAAAAATTGGTCCATCT+TGG | + | chr3_4:78934664-78934683 | Msa0525400:intron | 25.0% |
! | AATCATCTAAGTAAGTTCAA+AGG | + | chr3_4:78934795-78934814 | Msa0525400:intron | 25.0% |
! | ATGTACGTAACCAAAAAAAA+AGG | + | chr3_4:78934896-78934915 | Msa0525400:intron | 25.0% |
!!! | ATCTTTGAAGCCTTTTTTTT+TGG | - | chr3_4:78934909-78934928 | None:intergenic | 25.0% |
!! | TTTTCATTCTCAAATTGTCT+TGG | + | chr3_4:78935040-78935059 | Msa0525400:intron | 25.0% |
! | ACATAAATATTGGAACCTAT+AGG | - | chr3_4:78935073-78935092 | None:intergenic | 25.0% |
!!! | GTTCATAATTTTAACAGATG+TGG | + | chr3_4:78935137-78935156 | Msa0525400:intron | 25.0% |
! | ATTATATTTATGCACCAATG+AGG | - | chr3_4:78935257-78935276 | None:intergenic | 25.0% |
! | AAAATAGATGATAAAACACG+AGG | - | chr3_4:78935284-78935303 | None:intergenic | 25.0% |
! | TTGTCCAAAAAAAAAATGCA+TGG | + | chr3_4:78935478-78935497 | Msa0525400:intron | 25.0% |
!!! | ACAACCATGCATTTTTTTTT+TGG | - | chr3_4:78935485-78935504 | None:intergenic | 25.0% |
! | ATTAAAGAAATTCAAGCTCA+AGG | + | chr3_4:78935563-78935582 | Msa0525400:CDS | 25.0% |
! | ATGTAGCAATGGAAAATATT+TGG | - | chr3_4:78935718-78935737 | None:intergenic | 25.0% |
!!! | TTTCTTCTAAAATGTAGCAA+TGG | - | chr3_4:78935729-78935748 | None:intergenic | 25.0% |
!! | AAGTGATAATGATCAATTCA+AGG | + | chr3_4:78935818-78935837 | Msa0525400:CDS | 25.0% |
!! | AACAAAAGTTATTGGTAGTT+TGG | - | chr3_4:78935846-78935865 | None:intergenic | 25.0% |
!!! | TTTCATCATGTTGACTATTT+TGG | - | chr3_4:78935962-78935981 | None:intergenic | 25.0% |
! | ATATTCATTCTCAATCTACA+TGG | - | chr3_4:78936116-78936135 | None:intergenic | 25.0% |
! | ATGTAGATTGAGAATGAATA+TGG | + | chr3_4:78936115-78936134 | Msa0525400:intron | 25.0% |
! | CTCTCAAGTATTATTTATCA+TGG | + | chr3_4:78936271-78936290 | Msa0525400:intron | 25.0% |
! | CAAGTATTATTTATCATGGA+TGG | + | chr3_4:78936275-78936294 | Msa0525400:intron | 25.0% |
! | TAAAACTCATGAAACTACTT+AGG | - | chr3_4:78936355-78936374 | None:intergenic | 25.0% |
! | AGCAAATTATCTTATCTAAC+TGG | + | chr3_4:78936604-78936623 | Msa0525400:intron | 25.0% |
!!! | GAATTTCTGCTTATTTTTCT+TGG | + | chr3_4:78936814-78936833 | Msa0525400:intron | 25.0% |
!!! | AGGAACTAATTTTGATAGAT+TGG | + | chr3_4:78936871-78936890 | Msa0525400:CDS | 25.0% |
! | AATAACAGCTTATTATGATG+AGG | + | chr3_4:78936907-78936926 | Msa0525400:CDS | 25.0% |
! | TAATTAAGAATGAATCTTCC+TGG | + | chr3_4:78937150-78937169 | Msa0525400:intron | 25.0% |
!!! | CTCATCGATTTTAAAAGTAA+TGG | - | chr3_4:78937580-78937599 | None:intergenic | 25.0% |
!!! | CATATTTTTTTTGTTCGTGT+AGG | + | chr3_4:78937636-78937655 | Msa0525400:intron | 25.0% |
! | GATAGGAAAAAAACATCTTT+GGG | + | chr3_4:78938093-78938112 | Msa0525400:intron | 25.0% |
!!! | CTATACATGTTTTTAACTGT+AGG | + | chr3_4:78938207-78938226 | Msa0525400:intron | 25.0% |
! | AAAATGTCAATCTGATAAAC+GGG | + | chr3_4:78938274-78938293 | Msa0525400:CDS | 25.0% |
! | TTAACAATTGAGACAATTAC+CGG | - | chr3_4:78938339-78938358 | None:intergenic | 25.0% |
!! | CTTTCCTTTTTATTCATCAT+CGG | + | chr3_4:78938360-78938379 | Msa0525400:intron | 25.0% |
! | TGATAGCCAAAATAAGATTA+TGG | + | chr3_4:78938586-78938605 | Msa0525400:intron | 25.0% |
!! | TTCTTTTTACATGAAGAACT+CGG | + | chr3_4:78938627-78938646 | Msa0525400:intron | 25.0% |
! | AGATTTCAGTAATTACTCAT+GGG | + | chr3_4:78938705-78938724 | Msa0525400:CDS | 25.0% |
!! | TTCTTATACATTTTAAGCAG+TGG | - | chr3_4:78938885-78938904 | None:intergenic | 25.0% |
! | AAATTCATAGATAATCTTGG+AGG | + | chr3_4:78939146-78939165 | Msa0525400:intron | 25.0% |
! | AATTCATAGATAATCTTGGA+GGG | + | chr3_4:78939147-78939166 | Msa0525400:intron | 25.0% |
!!! | TATCTCAATCTTTCTAAGAT+TGG | + | chr3_4:78939233-78939252 | Msa0525400:intron | 25.0% |
! | TGTAGAATGTTTATAAACCA+TGG | + | chr3_4:78939643-78939662 | Msa0525400:intron | 25.0% |
! | ATGTTTATAAACCATGGAAA+AGG | + | chr3_4:78939649-78939668 | Msa0525400:intron | 25.0% |
! | TTGAGCAAAGAGTTATAAAA+AGG | - | chr3_4:78939733-78939752 | None:intergenic | 25.0% |
!! | CAACATTTTCATTTCCATTT+AGG | + | chr3_4:78939750-78939769 | Msa0525400:intron | 25.0% |
! | GTTGTAAGTAAATAAATGCT+TGG | - | chr3_4:78939921-78939940 | None:intergenic | 25.0% |
!! | ATGATGTGTGATCTTTTAAA+TGG | - | chr3_4:78940084-78940103 | None:intergenic | 25.0% |
! | TGTTGGTGAAATCAAAATCA+TGG | + | chr3_4:78932245-78932264 | Msa0525400:exon | 30.0% |
! | GTTGGTGAAATCAAAATCAT+GGG | + | chr3_4:78932246-78932265 | Msa0525400:exon | 30.0% |
! | CAGAGAAAAGGATTTTATGA+TGG | - | chr3_4:78932377-78932396 | None:intergenic | 30.0% |
! | CATCATAAAATCCTTTTCTC+TGG | + | chr3_4:78932375-78932394 | Msa0525400:CDS | 30.0% |
!! | ACTTTAGAACCAAAAAACAC+AGG | - | chr3_4:78932453-78932472 | None:intergenic | 30.0% |
AAACATGAGTGCTTATCATA+TGG | - | chr3_4:78932601-78932620 | None:intergenic | 30.0% | |
TTACTTGTATTTCATTCGAG+AGG | + | chr3_4:78933207-78933226 | Msa0525400:intron | 30.0% | |
TACTTGTATTTCATTCGAGA+GGG | + | chr3_4:78933208-78933227 | Msa0525400:intron | 30.0% | |
ACAATAATGTGTGTAACATG+GGG | + | chr3_4:78933336-78933355 | Msa0525400:intron | 30.0% | |
TTTATATGTTTCACATGGTG+AGG | + | chr3_4:78933488-78933507 | Msa0525400:intron | 30.0% | |
GGAATATCATACTCACATAA+TGG | - | chr3_4:78933550-78933569 | None:intergenic | 30.0% | |
GCAAAACTAATGGTTTAACA+AGG | + | chr3_4:78933787-78933806 | Msa0525400:intron | 30.0% | |
TCCTTAATTGCACTAGTTAT+CGG | + | chr3_4:78933882-78933901 | Msa0525400:intron | 30.0% | |
! | TCTTAGACCAATATTTTCAC+AGG | - | chr3_4:78933924-78933943 | None:intergenic | 30.0% |
! | GTGAAAATATTGGTCTAAGA+TGG | + | chr3_4:78933924-78933943 | Msa0525400:intron | 30.0% |
TTAATGACCATGATAAGGTT+TGG | - | chr3_4:78933985-78934004 | None:intergenic | 30.0% | |
AGTGTTTAATGACCATGATA+AGG | - | chr3_4:78933990-78934009 | None:intergenic | 30.0% | |
AACAAAGATATAACCCTCTA+TGG | - | chr3_4:78934222-78934241 | None:intergenic | 30.0% | |
!! | GGGTTATATCTTTGTTTCTA+TGG | + | chr3_4:78934226-78934245 | Msa0525400:intron | 30.0% |
TTATAGAAACACCATTTGCA+AGG | - | chr3_4:78934350-78934369 | None:intergenic | 30.0% | |
TAATATAGAGAAGTAGTAGC+TGG | + | chr3_4:78934367-78934386 | Msa0525400:intron | 30.0% | |
AATATAGAGAAGTAGTAGCT+GGG | + | chr3_4:78934368-78934387 | Msa0525400:intron | 30.0% | |
! | TTCTAATTTTCTACTGCAGA+TGG | - | chr3_4:78934412-78934431 | None:intergenic | 30.0% |
!!! | GATTTTGGTTTTGGGTTTTT+TGG | + | chr3_4:78934440-78934459 | Msa0525400:CDS | 30.0% |
! | TGAAACACTTTGAAAGAGAA+AGG | + | chr3_4:78934525-78934544 | Msa0525400:intron | 30.0% |
!! | AGATGGACTATGATAAGAAT+TGG | + | chr3_4:78934619-78934638 | Msa0525400:intron | 30.0% |
TGTAAGGTCTATGATAACTA+GGG | - | chr3_4:78934722-78934741 | None:intergenic | 30.0% | |
TTGTAAGGTCTATGATAACT+AGG | - | chr3_4:78934723-78934742 | None:intergenic | 30.0% | |
TCTTATCTAACACGATTGTA+AGG | - | chr3_4:78934738-78934757 | None:intergenic | 30.0% | |
TTAATTTCCAAAGCCAAAGA+AGG | + | chr3_4:78935166-78935185 | Msa0525400:CDS | 30.0% | |
! | TCATACAAACTTACGTGTTT+TGG | + | chr3_4:78935200-78935219 | Msa0525400:CDS | 30.0% |
ATACTTGCAAACAAAATGCA+TGG | + | chr3_4:78935452-78935471 | Msa0525400:intron | 30.0% | |
GTGCTGAAAATTAAATCTGT+GGG | - | chr3_4:78935652-78935671 | None:intergenic | 30.0% | |
TGTGCTGAAAATTAAATCTG+TGG | - | chr3_4:78935653-78935672 | None:intergenic | 30.0% | |
!!! | AACTCTCAATTTTTTGCTGT+AGG | + | chr3_4:78935751-78935770 | Msa0525400:intron | 30.0% |
!!! | ACTCTCAATTTTTTGCTGTA+GGG | + | chr3_4:78935752-78935771 | Msa0525400:intron | 30.0% |
TCACTTCTAAATACAATTCC+AGG | - | chr3_4:78935804-78935823 | None:intergenic | 30.0% | |
GGAAGGAAAACAAAAGTTAT+TGG | - | chr3_4:78935854-78935873 | None:intergenic | 30.0% | |
ACTACCAAAAATTGAATGCA+TGG | - | chr3_4:78935875-78935894 | None:intergenic | 30.0% | |
GTGAAACTGTCATTAAGAAA+AGG | - | chr3_4:78935923-78935942 | None:intergenic | 30.0% | |
TTGCATTGAAGTTTAAACCT+GGG | - | chr3_4:78936028-78936047 | None:intergenic | 30.0% | |
AAAGTAAGTTTCGAGAGAAT+GGG | + | chr3_4:78936146-78936165 | Msa0525400:CDS | 30.0% | |
CTTCTAAACGATTCAACATT+AGG | - | chr3_4:78936378-78936397 | None:intergenic | 30.0% | |
! | GATGTCATTTACTTAACGTT+TGG | + | chr3_4:78936630-78936649 | Msa0525400:intron | 30.0% |
! | AATAGTTTACAAGCTTTTGG+TGG | + | chr3_4:78936656-78936675 | Msa0525400:intron | 30.0% |
TATGAACAAGGCAACATTAT+AGG | - | chr3_4:78936714-78936733 | None:intergenic | 30.0% | |
TATCAAAATTAGTTCCTCCA+TGG | - | chr3_4:78936868-78936887 | None:intergenic | 30.0% | |
TTTGGTTAGACAACCAAAAT+GGG | + | chr3_4:78937031-78937050 | Msa0525400:CDS | 30.0% | |
AATATTTCGTATGAATTGCC+TGG | + | chr3_4:78937410-78937429 | Msa0525400:CDS | 30.0% | |
ATATTTCGTATGAATTGCCT+GGG | + | chr3_4:78937411-78937430 | Msa0525400:CDS | 30.0% | |
GCTGAATTGAACTTTAATTG+TGG | - | chr3_4:78937694-78937713 | None:intergenic | 30.0% | |
AGTTCAATTCAGCTGAAAAT+TGG | + | chr3_4:78937701-78937720 | Msa0525400:CDS | 30.0% | |
!! | TTGAAGTATCGGCAAAATTA+GGG | - | chr3_4:78937747-78937766 | None:intergenic | 30.0% |
!! | TTTGAAGTATCGGCAAAATT+AGG | - | chr3_4:78937748-78937767 | None:intergenic | 30.0% |
AAGATACATCTGACTATATG+TGG | + | chr3_4:78937806-78937825 | Msa0525400:CDS | 30.0% | |
TGTCAACAATCATCTTAGTA+AGG | - | chr3_4:78937919-78937938 | None:intergenic | 30.0% | |
TTGACATGTTGAATTGTTGA+TGG | + | chr3_4:78937933-78937952 | Msa0525400:intron | 30.0% | |
GTTCTTAGTATATACAGTCA+AGG | + | chr3_4:78937992-78938011 | Msa0525400:CDS | 30.0% | |
!!! | GATGTTTTTTTCCTATCCTA+AGG | - | chr3_4:78938090-78938109 | None:intergenic | 30.0% |
GGATAGGAAAAAAACATCTT+TGG | + | chr3_4:78938092-78938111 | Msa0525400:intron | 30.0% | |
CAACAATATGCAAGTTACAA+TGG | + | chr3_4:78938248-78938267 | Msa0525400:CDS | 30.0% | |
GTTGACAAATACTATGAAGA+TGG | - | chr3_4:78938431-78938450 | None:intergenic | 30.0% | |
! | TCTTTTTACATGAAGAACTC+GGG | + | chr3_4:78938628-78938647 | Msa0525400:intron | 30.0% |
AATTACTGAAATCTCTTCCT+TGG | - | chr3_4:78938699-78938718 | None:intergenic | 30.0% | |
GAGATTTCAGTAATTACTCA+TGG | + | chr3_4:78938704-78938723 | Msa0525400:CDS | 30.0% | |
GATTTCAGTAATTACTCATG+GGG | + | chr3_4:78938706-78938725 | Msa0525400:CDS | 30.0% | |
TGGATAATGATAGTTTCAAG+GGG | - | chr3_4:78938865-78938884 | None:intergenic | 30.0% | |
GTGGATAATGATAGTTTCAA+GGG | - | chr3_4:78938866-78938885 | None:intergenic | 30.0% | |
AGTGGATAATGATAGTTTCA+AGG | - | chr3_4:78938867-78938886 | None:intergenic | 30.0% | |
!! | AATCTTTCTAAGATTGGACA+AGG | + | chr3_4:78939239-78939258 | Msa0525400:intron | 30.0% |
!! | ATCTTTCTAAGATTGGACAA+GGG | + | chr3_4:78939240-78939259 | Msa0525400:intron | 30.0% |
GTCTTAAATACTTTACTCTG+TGG | - | chr3_4:78939562-78939581 | None:intergenic | 30.0% | |
! | TATAACAGTTACCTTTTCCA+TGG | - | chr3_4:78939663-78939682 | None:intergenic | 30.0% |
CTTCTTCAAGTATAACAAGT+AGG | - | chr3_4:78940001-78940020 | None:intergenic | 30.0% | |
TGTTATACTTGAAGAAGAAC+CGG | + | chr3_4:78940004-78940023 | Msa0525400:CDS | 30.0% | |
! | ATATACCATTATTTGGCTTC+AGG | + | chr3_4:78940168-78940187 | Msa0525400:three_prime_UTR | 30.0% |
AGTATTTCCTTTAGCTATAC+CGG | - | chr3_4:78940232-78940251 | None:intergenic | 30.0% | |
AAATCAAAATCATGGGAGAG+TGG | + | chr3_4:78932253-78932272 | Msa0525400:exon | 35.0% | |
AGAACATCGTTGGTCATTAA+CGG | + | chr3_4:78932351-78932370 | Msa0525400:CDS | 35.0% | |
AGTGAATTGAACCAGAGAAA+AGG | - | chr3_4:78932389-78932408 | None:intergenic | 35.0% | |
! | GCTGAAACTTAAAGCACTTA+AGG | + | chr3_4:78933282-78933301 | Msa0525400:intron | 35.0% |
!!! | AACCATTAGTTTTGCCAAGA+CGG | - | chr3_4:78933782-78933801 | None:intergenic | 35.0% |
ACCGATAACTAGTGCAATTA+AGG | - | chr3_4:78933886-78933905 | None:intergenic | 35.0% | |
GATCCAACGGTACAAAAAAT+TGG | - | chr3_4:78933951-78933970 | None:intergenic | 35.0% | |
AGAGAATGAATGAGAGTGAT+AGG | - | chr3_4:78934030-78934049 | None:intergenic | 35.0% | |
!! | TTGTGTTGTGAGTATTGAGA+GGG | - | chr3_4:78934176-78934195 | None:intergenic | 35.0% |
!! | TTATCATTTTGGCACATGCT+TGG | + | chr3_4:78934256-78934275 | Msa0525400:intron | 35.0% |
TGATAGAGAGATGAAGTTGA+TGG | + | chr3_4:78934582-78934601 | Msa0525400:intron | 35.0% | |
! | GATAGAGAGATGAAGTTGAT+GGG | + | chr3_4:78934583-78934602 | Msa0525400:intron | 35.0% |
TGGGTTGTATTTGATACAGA+TGG | + | chr3_4:78934602-78934621 | Msa0525400:intron | 35.0% | |
!! | TTTTCAGTTTTGGTCCAAGA+TGG | - | chr3_4:78934681-78934700 | None:intergenic | 35.0% |
ATCTTGGACCAAAACTGAAA+AGG | + | chr3_4:78934680-78934699 | Msa0525400:intron | 35.0% | |
AAGAATGTTTGACGATAGAG+TGG | + | chr3_4:78934754-78934773 | Msa0525400:intron | 35.0% | |
AGAATGTTTGACGATAGAGT+GGG | + | chr3_4:78934755-78934774 | Msa0525400:intron | 35.0% | |
!! | TTGGCTTTGGAAATTAAGTC+AGG | - | chr3_4:78935163-78935182 | None:intergenic | 35.0% |
CCACTGAATTTCAACTACTA+AGG | - | chr3_4:78935351-78935370 | None:intergenic | 35.0% | |
CCTTAGTAGTTGAAATTCAG+TGG | + | chr3_4:78935348-78935367 | Msa0525400:intron | 35.0% | |
ATGTGTGTCCCACAAAAATT+TGG | + | chr3_4:78935384-78935403 | Msa0525400:intron | 35.0% | |
! | TAGTGGAAGGTTTGATTTAG+TGG | + | chr3_4:78935535-78935554 | Msa0525400:CDS | 35.0% |
! | AGTGGAAGGTTTGATTTAGT+GGG | + | chr3_4:78935536-78935555 | Msa0525400:CDS | 35.0% |
TTATATGTGACCCTTCGAAT+TGG | + | chr3_4:78935587-78935606 | Msa0525400:CDS | 35.0% | |
AATGTATGGTCCAATTCGAA+GGG | - | chr3_4:78935600-78935619 | None:intergenic | 35.0% | |
ATTGAGAGTGAATGCACTTA+TGG | + | chr3_4:78935617-78935636 | Msa0525400:CDS | 35.0% | |
TTGAGAGTGAATGCACTTAT+GGG | + | chr3_4:78935618-78935637 | Msa0525400:CDS | 35.0% | |
!!! | CTCTCAATTTTTTGCTGTAG+GGG | + | chr3_4:78935753-78935772 | Msa0525400:intron | 35.0% |
GGAACATCATGTAACCATAA+TGG | - | chr3_4:78935783-78935802 | None:intergenic | 35.0% | |
TTATGGTTACATGATGTTCC+TGG | + | chr3_4:78935783-78935802 | Msa0525400:CDS | 35.0% | |
CCAAAAATTGAATGCATGGA+AGG | - | chr3_4:78935871-78935890 | None:intergenic | 35.0% | |
! | CCTTCCATGCATTCAATTTT+TGG | + | chr3_4:78935868-78935887 | Msa0525400:intron | 35.0% |
TCCTTGTGAAGCAAAAAGAT+TGG | - | chr3_4:78935989-78936008 | None:intergenic | 35.0% | |
! | AATCTTTTTGCTTCACAAGG+AGG | + | chr3_4:78935988-78936007 | Msa0525400:CDS | 35.0% |
TAAACCTGGGATAGTATGAT+AGG | - | chr3_4:78936015-78936034 | None:intergenic | 35.0% | |
GTTGCATTGAAGTTTAAACC+TGG | - | chr3_4:78936029-78936048 | None:intergenic | 35.0% | |
CAAAGTAAGTTTCGAGAGAA+TGG | + | chr3_4:78936145-78936164 | Msa0525400:CDS | 35.0% | |
! | TCTTGTTTACACATCATCCA+AGG | - | chr3_4:78936226-78936245 | None:intergenic | 35.0% |
! | CTCCGTCTATTTTATATCGT+CGG | + | chr3_4:78936308-78936327 | Msa0525400:intron | 35.0% |
GACCGACGATATAAAATAGA+CGG | - | chr3_4:78936313-78936332 | None:intergenic | 35.0% | |
CAATGTGGGAGAAACTTTAA+GGG | + | chr3_4:78936459-78936478 | Msa0525400:CDS | 35.0% | |
AATGTGGGAGAAACTTTAAG+GGG | + | chr3_4:78936460-78936479 | Msa0525400:CDS | 35.0% | |
! | TCCTTTCTTTGCTATGAACA+AGG | - | chr3_4:78936726-78936745 | None:intergenic | 35.0% |
! | TTCAGCTAAGTTGAAAGAGA+AGG | - | chr3_4:78936797-78936816 | None:intergenic | 35.0% |
AGCTGTTATTATGAAAGCAG+AGG | - | chr3_4:78936897-78936916 | None:intergenic | 35.0% | |
GTTTGGTTAGACAACCAAAA+TGG | + | chr3_4:78937030-78937049 | Msa0525400:CDS | 35.0% | |
TTGGTTAGACAACCAAAATG+GGG | + | chr3_4:78937032-78937051 | Msa0525400:CDS | 35.0% | |
AAATTGCGGAAAATATGTCC+AGG | - | chr3_4:78937171-78937190 | None:intergenic | 35.0% | |
! | AACTTCTGAAAACATAAGCC+TGG | - | chr3_4:78937328-78937347 | None:intergenic | 35.0% |
AATTGGATTGTTACATCCCT+AGG | - | chr3_4:78937386-78937405 | None:intergenic | 35.0% | |
AAATCAATCAGTATCCTACC+AGG | + | chr3_4:78937434-78937453 | Msa0525400:CDS | 35.0% | |
AAGAATGTAGTCTTCAACAC+CGG | + | chr3_4:78937461-78937480 | Msa0525400:CDS | 35.0% | |
! | AACATTCGATTTTACCTTGC+CGG | - | chr3_4:78937483-78937502 | None:intergenic | 35.0% |
ATGGTCAAATCAAGTAAAGC+AGG | - | chr3_4:78937561-78937580 | None:intergenic | 35.0% | |
TAATTGTGGTTTCATTGCTC+TGG | - | chr3_4:78937680-78937699 | None:intergenic | 35.0% | |
!!! | GTCTGCTCTTTTTGAAGTAT+CGG | - | chr3_4:78937758-78937777 | None:intergenic | 35.0% |
ACTATATGTGGTACACTTTC+AGG | + | chr3_4:78937818-78937837 | Msa0525400:CDS | 35.0% | |
CTAAGAACAGATTGTGCATT+AGG | - | chr3_4:78937980-78937999 | None:intergenic | 35.0% | |
! | GTTTTGCATTCTTTCGTCAA+TGG | + | chr3_4:78938019-78938038 | Msa0525400:CDS | 35.0% |
!! | TTCGTCAATGGAGTTTTAAC+AGG | + | chr3_4:78938031-78938050 | Msa0525400:CDS | 35.0% |
AGCACTAAATCTCATTTCTG+AGG | + | chr3_4:78938056-78938075 | Msa0525400:intron | 35.0% | |
CTTGCCGATGATGAATAAAA+AGG | - | chr3_4:78938367-78938386 | None:intergenic | 35.0% | |
AGGTAGAAGAAACTTCTCAA+TGG | - | chr3_4:78938478-78938497 | None:intergenic | 35.0% | |
! | AGTCTTGTGATCTCAAATCT+AGG | - | chr3_4:78938498-78938517 | None:intergenic | 35.0% |
! | GATTTGAGATCACAAGACTA+TGG | + | chr3_4:78938499-78938518 | Msa0525400:intron | 35.0% |
TTTACTCAAACCAGCAACTT+TGG | - | chr3_4:78938668-78938687 | None:intergenic | 35.0% | |
TAATTACTCATGGGGATATC+AGG | + | chr3_4:78938714-78938733 | Msa0525400:CDS | 35.0% | |
! | TAAATGAAGGTTGGGTTGTT+AGG | + | chr3_4:78938985-78939004 | Msa0525400:intron | 35.0% |
TTGCAAATCTATTCAGTCAG+TGG | + | chr3_4:78939015-78939034 | Msa0525400:CDS | 35.0% | |
GTAGGAGAAACAAAAAACCA+AGG | - | chr3_4:78939196-78939215 | None:intergenic | 35.0% | |
AGAATCTAGCACAAAGTAGT+AGG | - | chr3_4:78939214-78939233 | None:intergenic | 35.0% | |
TAAATGCTTAGCAGTTATGC+TGG | - | chr3_4:78939289-78939308 | None:intergenic | 35.0% | |
GAAACATACCATTGTTGTGA+AGG | - | chr3_4:78939535-78939554 | None:intergenic | 35.0% | |
GACTGTTTAGAAGACCTAAA+TGG | - | chr3_4:78939767-78939786 | None:intergenic | 35.0% | |
GTTCTTTCCTAAAATCGACT+GGG | + | chr3_4:78939973-78939992 | Msa0525400:CDS | 35.0% | |
GTTATACTTGAAGAAGAACC+GGG | + | chr3_4:78940005-78940024 | Msa0525400:CDS | 35.0% | |
! | GTGTGATCTTTTAAATGGAG+AGG | - | chr3_4:78940079-78940098 | None:intergenic | 35.0% |
TATTCGTATGACTGAACACA+GGG | - | chr3_4:78940129-78940148 | None:intergenic | 35.0% | |
TTATTCGTATGACTGAACAC+AGG | - | chr3_4:78940130-78940149 | None:intergenic | 35.0% | |
ATATGACTTGAACGTACCTG+AGG | - | chr3_4:78932426-78932445 | None:intergenic | 40.0% | |
!!! | GGACCAATTTTTTGTACCGT+TGG | + | chr3_4:78933945-78933964 | Msa0525400:intron | 40.0% |
! | TGACCATGATAAGGTTTGGT+GGG | - | chr3_4:78933981-78934000 | None:intergenic | 40.0% |
ATGACCATGATAAGGTTTGG+TGG | - | chr3_4:78933982-78934001 | None:intergenic | 40.0% | |
TACCTTCCATATTTCCAGAG+AGG | + | chr3_4:78934058-78934077 | Msa0525400:intron | 40.0% | |
!! | CTTGTGTTGTGAGTATTGAG+AGG | - | chr3_4:78934177-78934196 | None:intergenic | 40.0% |
CAACACAAGTGACAAACTCA+AGG | + | chr3_4:78934188-78934207 | Msa0525400:intron | 40.0% | |
! | TTGGCACATGCTTGGTAATA+TGG | + | chr3_4:78934264-78934283 | Msa0525400:intron | 40.0% |
TTGGGAGTTGAGATTGTGAA+TGG | + | chr3_4:78934459-78934478 | Msa0525400:intron | 40.0% | |
! | AGCTTGGACCTTTTCAGTTT+TGG | - | chr3_4:78934691-78934710 | None:intergenic | 40.0% |
CTGAAAAGGTCCAAGCTAAA+TGG | + | chr3_4:78934694-78934713 | Msa0525400:intron | 40.0% | |
TGTCTTGGTCTATAGCCTAT+AGG | + | chr3_4:78935055-78935074 | Msa0525400:intron | 40.0% | |
ATTTCCAAAGCCAAAGAAGG+AGG | + | chr3_4:78935169-78935188 | Msa0525400:CDS | 40.0% | |
! | TAATCCTCCTTCTTTGGCTT+TGG | - | chr3_4:78935176-78935195 | None:intergenic | 40.0% |
GACATCTAATCCTCCTTCTT+TGG | - | chr3_4:78935182-78935201 | None:intergenic | 40.0% | |
TGGGACACACATGATTTAGT+GGG | - | chr3_4:78935376-78935395 | None:intergenic | 40.0% | |
! | GTGTCTCGCCAAATTTTTGT+GGG | - | chr3_4:78935395-78935414 | None:intergenic | 40.0% |
! | TGTGTCTCGCCAAATTTTTG+TGG | - | chr3_4:78935396-78935415 | None:intergenic | 40.0% |
CTTCTGCAGTATGAGTTTAG+TGG | + | chr3_4:78935518-78935537 | Msa0525400:intron | 40.0% | |
TGCAGTATGAGTTTAGTGGA+AGG | + | chr3_4:78935522-78935541 | Msa0525400:intron | 40.0% | |
CAATGTATGGTCCAATTCGA+AGG | - | chr3_4:78935601-78935620 | None:intergenic | 40.0% | |
GTGCATTCACTCTCAATGTA+TGG | - | chr3_4:78935614-78935633 | None:intergenic | 40.0% | |
! | GCCAATCTTTTTGCTTCACA+AGG | + | chr3_4:78935985-78936004 | Msa0525400:CDS | 40.0% |
GCAATGTGGGAGAAACTTTA+AGG | + | chr3_4:78936458-78936477 | Msa0525400:CDS | 40.0% | |
CAATTCTCTGTCCATAGTGA+AGG | - | chr3_4:78936504-78936523 | None:intergenic | 40.0% | |
CTTCACTATGGACAGAGAAT+TGG | + | chr3_4:78936502-78936521 | Msa0525400:CDS | 40.0% | |
! | TCTGAAGCTGATCTCAAGTA+TGG | - | chr3_4:78936686-78936705 | None:intergenic | 40.0% |
! | GCCTTGTTCATAGCAAAGAA+AGG | + | chr3_4:78936722-78936741 | Msa0525400:CDS | 40.0% |
! | AGCTAAGTTGAAAGAGAAGG+AGG | - | chr3_4:78936794-78936813 | None:intergenic | 40.0% |
ACGAATTTGATGCAGTACCA+TGG | + | chr3_4:78936848-78936867 | Msa0525400:intron | 40.0% | |
AATTTGATGCAGTACCATGG+AGG | + | chr3_4:78936851-78936870 | Msa0525400:intron | 40.0% | |
TTATTATGATGAGGCTCCAC+TGG | + | chr3_4:78936916-78936935 | Msa0525400:CDS | 40.0% | |
TCCACTGGATGAATATGGTA+TGG | + | chr3_4:78936931-78936950 | Msa0525400:intron | 40.0% | |
ACCATACCATATTCATCCAG+TGG | - | chr3_4:78936935-78936954 | None:intergenic | 40.0% | |
TTTGGTTGTCTAACCAAACC+TGG | - | chr3_4:78937029-78937048 | None:intergenic | 40.0% | |
ACCAAAATGGGGACATCTTA+AGG | + | chr3_4:78937043-78937062 | Msa0525400:CDS | 40.0% | |
! | TCCTTAAGATGTCCCCATTT+TGG | - | chr3_4:78937047-78937066 | None:intergenic | 40.0% |
TGTTCACAACCTCTACTTGA+TGG | + | chr3_4:78937089-78937108 | Msa0525400:CDS | 40.0% | |
! | GTTTGAGTTCCATCAAGTAG+AGG | - | chr3_4:78937101-78937120 | None:intergenic | 40.0% |
! | TTTTCTCACCTTTTTCCACC+AGG | + | chr3_4:78937307-78937326 | Msa0525400:intron | 40.0% |
AACATAAGCCTGGTGGAAAA+AGG | - | chr3_4:78937318-78937337 | None:intergenic | 40.0% | |
! | TTCTGAAAACATAAGCCTGG+TGG | - | chr3_4:78937325-78937344 | None:intergenic | 40.0% |
! | AGGTCCACTATTTTCCAAGA+AGG | - | chr3_4:78937366-78937385 | None:intergenic | 40.0% |
!! | TCTTGGAAAATAGTGGACCT+AGG | + | chr3_4:78937366-78937385 | Msa0525400:CDS | 40.0% |
!! | CTTGGAAAATAGTGGACCTA+GGG | + | chr3_4:78937367-78937386 | Msa0525400:CDS | 40.0% |
! | AGGATACTGATTGATTTCCC+AGG | - | chr3_4:78937431-78937450 | None:intergenic | 40.0% |
!! | AGTATCGGCAAAATTAGGGA+TGG | - | chr3_4:78937743-78937762 | None:intergenic | 40.0% |
CAAACATTCTTTAGTGCAGC+TGG | - | chr3_4:78937868-78937887 | None:intergenic | 40.0% | |
!! | TGTTGAATTGTTGATGGTGC+AGG | + | chr3_4:78937939-78937958 | Msa0525400:intron | 40.0% |
! | TTCTGAGGATCATGTTCCTT+AGG | + | chr3_4:78938071-78938090 | Msa0525400:intron | 40.0% |
AGGATCATGTTCCTTAGGAT+AGG | + | chr3_4:78938076-78938095 | Msa0525400:intron | 40.0% | |
ACATCTTTGGGCAAAAGACT+TGG | + | chr3_4:78938105-78938124 | Msa0525400:intron | 40.0% | |
TTAACTGTAGGTTCTGCACA+TGG | + | chr3_4:78938219-78938238 | Msa0525400:intron | 40.0% | |
TCCATACTTAGTGCAACAGT+GGG | + | chr3_4:78938309-78938328 | Msa0525400:CDS | 40.0% | |
! | TTTCTAGAGACCAAAGTTGC+TGG | + | chr3_4:78938655-78938674 | Msa0525400:CDS | 40.0% |
!! | AGTTGCTGGTTTGAGTAAAG+TGG | + | chr3_4:78938669-78938688 | Msa0525400:CDS | 40.0% |
TTGAGTAAAGTGGAAGTCCA+AGG | + | chr3_4:78938679-78938698 | Msa0525400:CDS | 40.0% | |
AATTCTACATCAGCATGCAG+TGG | - | chr3_4:78938963-78938982 | None:intergenic | 40.0% | |
GTGGATCAAGTAAAGTTCAG+TGG | + | chr3_4:78939034-78939053 | Msa0525400:CDS | 40.0% | |
TAAACCACTCACATGGTATC+AGG | + | chr3_4:78939077-78939096 | Msa0525400:CDS | 40.0% | |
ATTACCTGATACCATGTGAG+TGG | - | chr3_4:78939084-78939103 | None:intergenic | 40.0% | |
ACCAAGGTCTTTACGAGATT+GGG | - | chr3_4:78939180-78939199 | None:intergenic | 40.0% | |
AACCAAGGTCTTTACGAGAT+TGG | - | chr3_4:78939181-78939200 | None:intergenic | 40.0% | |
TAAGATTGGACAAGGGATGA+AGG | + | chr3_4:78939247-78939266 | Msa0525400:intron | 40.0% | |
!! | AGTGCTTAACCTTGGTTCTA+TGG | + | chr3_4:78939435-78939454 | Msa0525400:CDS | 40.0% |
!! | GTGCTTAACCTTGGTTCTAT+GGG | + | chr3_4:78939436-78939455 | Msa0525400:CDS | 40.0% |
!! | TAACCTTGGTTCTATGGGAA+AGG | + | chr3_4:78939441-78939460 | Msa0525400:CDS | 40.0% |
!! | AACCTTGGTTCTATGGGAAA+GGG | + | chr3_4:78939442-78939461 | Msa0525400:CDS | 40.0% |
!! | CCAAGGTATTGGACGATATT+GGG | + | chr3_4:78939483-78939502 | Msa0525400:CDS | 40.0% |
GTATCTTTCCACAAACCAGA+TGG | + | chr3_4:78939505-78939524 | Msa0525400:CDS | 40.0% | |
ATGGAACTCCTTCACAACAA+TGG | + | chr3_4:78939524-78939543 | Msa0525400:CDS | 40.0% | |
!! | GTCGATTTTAGGAAAGAACG+TGG | - | chr3_4:78939972-78939991 | None:intergenic | 40.0% |
CGTTCTTTCCTAAAATCGAC+TGG | + | chr3_4:78939972-78939991 | Msa0525400:CDS | 40.0% | |
! | TGTCTAGAGTGATTCCTAAG+GGG | - | chr3_4:78940033-78940052 | None:intergenic | 40.0% |
! | GTGTCTAGAGTGATTCCTAA+GGG | - | chr3_4:78940034-78940053 | None:intergenic | 40.0% |
! | TGTGTCTAGAGTGATTCCTA+AGG | - | chr3_4:78940035-78940054 | None:intergenic | 40.0% |
GTGAACCTGAAGCCAAATAA+TGG | - | chr3_4:78940176-78940195 | None:intergenic | 40.0% | |
! | GCTTCAGGTTCACTCTAAAA+GGG | + | chr3_4:78940183-78940202 | Msa0525400:three_prime_UTR | 40.0% |
ATTTCCTTTAGCTATACCGG+TGG | - | chr3_4:78940229-78940248 | None:intergenic | 40.0% | |
TCAAAATCATGGGAGAGTGG+TGG | + | chr3_4:78932256-78932275 | Msa0525400:exon | 45.0% | |
TACCTACGACAGAACATCGT+TGG | + | chr3_4:78932341-78932360 | Msa0525400:CDS | 45.0% | |
AAAAAGAGAGGCAGAGACGA+GGG | + | chr3_4:78932672-78932691 | Msa0525400:intron | 45.0% | |
!! | CATTCGAGAGGGAGTATTAC+TGG | + | chr3_4:78933219-78933238 | Msa0525400:intron | 45.0% |
!! | TAGTTTTGCCAAGACGGCAA+AGG | - | chr3_4:78933776-78933795 | None:intergenic | 45.0% |
TGCCGTCTTGGCAAAACTAA+TGG | + | chr3_4:78933777-78933796 | Msa0525400:intron | 45.0% | |
! | GGTGGGTTCATATGATCCAA+CGG | - | chr3_4:78933964-78933983 | None:intergenic | 45.0% |
GAACCCACCAAACCTTATCA+TGG | + | chr3_4:78933975-78933994 | Msa0525400:intron | 45.0% | |
! | TGCCTCTCTGGAAATATGGA+AGG | - | chr3_4:78934063-78934082 | None:intergenic | 45.0% |
! | TTGCTGCCTCTCTGGAAATA+TGG | - | chr3_4:78934067-78934086 | None:intergenic | 45.0% |
AGACTTTATTGCTGCCTCTC+TGG | - | chr3_4:78934075-78934094 | None:intergenic | 45.0% | |
TCAAGGTTGTGCTACCATAG+AGG | + | chr3_4:78934205-78934224 | Msa0525400:intron | 45.0% | |
CAAGGTTGTGCTACCATAGA+GGG | + | chr3_4:78934206-78934225 | Msa0525400:intron | 45.0% | |
ACTTGCTTCAGCCTTGCAAA+TGG | + | chr3_4:78934336-78934355 | Msa0525400:intron | 45.0% | |
AGAGAAGTAGTAGCTGGGAT+TGG | + | chr3_4:78934373-78934392 | Msa0525400:intron | 45.0% | |
GAGAAGTAGTAGCTGGGATT+GGG | + | chr3_4:78934374-78934393 | Msa0525400:intron | 45.0% | |
!! | AACTAGGGTGCCATTTAGCT+TGG | - | chr3_4:78934707-78934726 | None:intergenic | 45.0% |
ATGTTTGACGATAGAGTGGG+TGG | + | chr3_4:78934758-78934777 | Msa0525400:intron | 45.0% | |
AATCTTCACGAGCCTCAACA+AGG | + | chr3_4:78935223-78935242 | Msa0525400:CDS | 45.0% | |
TATGCACCAATGAGGTTACC+TGG | - | chr3_4:78935249-78935268 | None:intergenic | 45.0% | |
GTGGGACACACATGATTTAG+TGG | - | chr3_4:78935377-78935396 | None:intergenic | 45.0% | |
AGGACCTATCATACTATCCC+AGG | + | chr3_4:78936008-78936027 | Msa0525400:CDS | 45.0% | |
! | ATGGGTTGCCCTATATTCGT+TGG | + | chr3_4:78936164-78936183 | Msa0525400:CDS | 45.0% |
TGGGTTGCCCTATATTCGTT+GGG | + | chr3_4:78936165-78936184 | Msa0525400:CDS | 45.0% | |
ATACTTGAGAGACTGACCAC+TGG | - | chr3_4:78936262-78936281 | None:intergenic | 45.0% | |
ATGCAGATCAACGCATGCAA+TGG | + | chr3_4:78936432-78936451 | Msa0525400:intron | 45.0% | |
CATGCAATGGCATGCAATGT+GGG | + | chr3_4:78936445-78936464 | Msa0525400:CDS | 45.0% | |
!! | GAAGGCTTGTTAGGAGAGTT+TGG | - | chr3_4:78936486-78936505 | None:intergenic | 45.0% |
CTCCTAACAAGCCTTCACTA+TGG | + | chr3_4:78936490-78936509 | Msa0525400:CDS | 45.0% | |
! | GTCCATAGTGAAGGCTTGTT+AGG | - | chr3_4:78936495-78936514 | None:intergenic | 45.0% |
CACAGTCAGTCACGTAACAA+TGG | - | chr3_4:78936997-78937016 | None:intergenic | 45.0% | |
TTACGTGACTGACTGTGCTA+AGG | + | chr3_4:78937000-78937019 | Msa0525400:intron | 45.0% | |
TGTGCTAAGGTAACCAGGTT+TGG | + | chr3_4:78937013-78937032 | Msa0525400:intron | 45.0% | |
ACTCAAACCACCTTCAGCTT+AGG | + | chr3_4:78937113-78937132 | Msa0525400:CDS | 45.0% | |
GCTGCCTTCTTGGAAAATAG+TGG | + | chr3_4:78937359-78937378 | Msa0525400:CDS | 45.0% | |
AAGACTACATTCTTGCAGCC+TGG | - | chr3_4:78937455-78937474 | None:intergenic | 45.0% | |
CTCCATACTTAGTGCAACAG+TGG | + | chr3_4:78938308-78938327 | Msa0525400:CDS | 45.0% | |
TCCCACTGTTGCACTAAGTA+TGG | - | chr3_4:78938313-78938332 | None:intergenic | 45.0% | |
GCTCTACTAAACCACTCACA+TGG | + | chr3_4:78939070-78939089 | Msa0525400:CDS | 45.0% | |
AGGTCTTTACGAGATTGGGT+TGG | - | chr3_4:78939176-78939195 | None:intergenic | 45.0% | |
ACCCAATCTCGTAAAGACCT+TGG | + | chr3_4:78939176-78939195 | Msa0525400:intron | 45.0% | |
GATCCTGTAGTGCTTAACCT+TGG | + | chr3_4:78939427-78939446 | Msa0525400:CDS | 45.0% | |
GAACCAAGGTTAAGCACTAC+AGG | - | chr3_4:78939433-78939452 | None:intergenic | 45.0% | |
! | TATGGGAAAGGGACTTGCTT+GGG | + | chr3_4:78939453-78939472 | Msa0525400:CDS | 45.0% |
! | AAGGGACTTGCTTGGGTTAA+TGG | + | chr3_4:78939460-78939479 | Msa0525400:CDS | 45.0% |
TGGGTTAATGGCCAAGGTAT+TGG | + | chr3_4:78939472-78939491 | Msa0525400:CDS | 45.0% | |
!! | GCCAAGGTATTGGACGATAT+TGG | + | chr3_4:78939482-78939501 | Msa0525400:CDS | 45.0% |
CCCAATATCGTCCAATACCT+TGG | - | chr3_4:78939486-78939505 | None:intergenic | 45.0% | |
! | AAGGAGTTCCATCTGGTTTG+TGG | - | chr3_4:78939516-78939535 | None:intergenic | 45.0% |
TGTTGTGAAGGAGTTCCATC+TGG | - | chr3_4:78939523-78939542 | None:intergenic | 45.0% | |
!! | GTAGGTTCCCAGTCGATTTT+AGG | - | chr3_4:78939983-78940002 | None:intergenic | 45.0% |
! | GGCTTCAGGTTCACTCTAAA+AGG | + | chr3_4:78940182-78940201 | Msa0525400:three_prime_UTR | 45.0% |
TCTTACAAGCAAAGAGCCAC+CGG | + | chr3_4:78940210-78940229 | Msa0525400:three_prime_UTR | 45.0% | |
!!! | TATTTAATTATTTTTTTTAC+TGG | + | chr3_4:78933750-78933769 | Msa0525400:intron | 5.0% |
GGTAACATTGCCACCATGGA+CGG | - | chr3_4:78932325-78932344 | None:intergenic | 50.0% | |
CGTAGGTAACATTGCCACCA+TGG | - | chr3_4:78932329-78932348 | None:intergenic | 50.0% | |
GACCAACGATGTTCTGTCGT+AGG | - | chr3_4:78932346-78932365 | None:intergenic | 50.0% | |
GAAAAAGAGAGGCAGAGACG+AGG | + | chr3_4:78932671-78932690 | Msa0525400:intron | 50.0% | |
! | TCATTGATGGCAACTGCCAG+TGG | + | chr3_4:78933435-78933454 | Msa0525400:intron | 50.0% |
GTACACACAAGTGATGCCAC+TGG | - | chr3_4:78933454-78933473 | None:intergenic | 50.0% | |
!! | TTTACTGGCCTTTGCCGTCT+TGG | + | chr3_4:78933765-78933784 | Msa0525400:intron | 50.0% |
ACAAGGCCAGGTAACCTCAT+TGG | + | chr3_4:78935240-78935259 | Msa0525400:intron | 50.0% | |
GCTGTAGGGGTCTACCATTA+TGG | + | chr3_4:78935766-78935785 | Msa0525400:intron | 50.0% | |
TGGGCAGCCCAACGAATATA+GGG | - | chr3_4:78936175-78936194 | None:intergenic | 50.0% | |
TTGGGCAGCCCAACGAATAT+AGG | - | chr3_4:78936176-78936195 | None:intergenic | 50.0% | |
TATTCGTTGGGCTGCCCAAA+TGG | + | chr3_4:78936177-78936196 | Msa0525400:CDS | 50.0% | |
TTGAAGTCCCACGGCCATTT+GGG | - | chr3_4:78936194-78936213 | None:intergenic | 50.0% | |
! | TTTGAAGTCCCACGGCCATT+TGG | - | chr3_4:78936195-78936214 | None:intergenic | 50.0% |
ACACATCATCCAAGGCACAC+CGG | - | chr3_4:78936218-78936237 | None:intergenic | 50.0% | |
AGATGATGCTCCTGATCCAG+TGG | + | chr3_4:78936243-78936262 | Msa0525400:CDS | 50.0% | |
GCATGCAATGGCATGCAATG+TGG | + | chr3_4:78936444-78936463 | Msa0525400:CDS | 50.0% | |
GAGGCTCCACTGGATGAATA+TGG | + | chr3_4:78936926-78936945 | Msa0525400:CDS | 50.0% | |
CTGACTGTGCTAAGGTAACC+AGG | + | chr3_4:78937008-78937027 | Msa0525400:intron | 50.0% | |
TTGCTGTGAGCCTAAGCTGA+AGG | - | chr3_4:78937126-78937145 | None:intergenic | 50.0% | |
CAAGAAGGCAGCACATTCTG+TGG | - | chr3_4:78937351-78937370 | None:intergenic | 50.0% | |
CACAGAATGTGCTGCCTTCT+TGG | + | chr3_4:78937349-78937368 | Msa0525400:CDS | 50.0% | |
CTACATTCTTGCAGCCTGGT+AGG | - | chr3_4:78937451-78937470 | None:intergenic | 50.0% | |
TGTAGTCTTCAACACCGGCA+AGG | + | chr3_4:78937466-78937485 | Msa0525400:CDS | 50.0% | |
TAGTGCAACAGTGGGATTGC+CGG | + | chr3_4:78938317-78938336 | Msa0525400:CDS | 50.0% | |
ACTACAGGATCATTGCCAGC+TGG | - | chr3_4:78939418-78939437 | None:intergenic | 50.0% | |
GTCCCTTTCCCATAGAACCA+AGG | - | chr3_4:78939447-78939466 | None:intergenic | 50.0% | |
! | CTATGGGAAAGGGACTTGCT+TGG | + | chr3_4:78939452-78939471 | Msa0525400:CDS | 50.0% |
CTTGCTTGGGTTAATGGCCA+AGG | + | chr3_4:78939466-78939485 | Msa0525400:CDS | 50.0% | |
AGTGATTCCTAAGGGGTTCC+CGG | - | chr3_4:78940026-78940045 | None:intergenic | 50.0% | |
AGAGCCACCGGTATAGCTAA+AGG | + | chr3_4:78940222-78940241 | Msa0525400:three_prime_UTR | 50.0% | |
GTGTCTCTTTGCACCGTCCA+TGG | + | chr3_4:78932309-78932328 | Msa0525400:CDS | 55.0% | |
TCTCTTTGCACCGTCCATGG+TGG | + | chr3_4:78932312-78932331 | Msa0525400:CDS | 55.0% | |
CTATCCTCGTAGCACTCCTC+AGG | + | chr3_4:78932407-78932426 | Msa0525400:CDS | 55.0% | |
AGTAGCTGGGATTGGGAGCT+TGG | + | chr3_4:78934381-78934400 | Msa0525400:CDS | 55.0% | |
GTAGCTGGGATTGGGAGCTT+GGG | + | chr3_4:78934382-78934401 | Msa0525400:CDS | 55.0% | |
!! | GAGGTTACCTGGCCTTGTTG+AGG | - | chr3_4:78935238-78935257 | None:intergenic | 55.0% |
ATGGCCGTGGGACTTCAAAC+CGG | + | chr3_4:78936196-78936215 | Msa0525400:CDS | 55.0% | |
!! | CACACCGGTTTGAAGTCCCA+CGG | - | chr3_4:78936203-78936222 | None:intergenic | 55.0% |
GACTTCAAACCGGTGTGCCT+TGG | + | chr3_4:78936206-78936225 | Msa0525400:CDS | 55.0% | |
GAGAGACTGACCACTGGATC+AGG | - | chr3_4:78936256-78936275 | None:intergenic | 55.0% | |
CTGTGAGCCTAAGCTGAAGG+TGG | - | chr3_4:78937123-78937142 | None:intergenic | 55.0% | |
ACCACATTCGATGCACCAGC+TGG | + | chr3_4:78939400-78939419 | Msa0525400:CDS | 55.0% | |
AGAAGAACCGGGAACCCCTT+AGG | + | chr3_4:78940016-78940035 | Msa0525400:CDS | 55.0% | |
!! | CGTACCTGAGGAGTGCTACG+AGG | - | chr3_4:78932414-78932433 | None:intergenic | 60.0% |
AAGAGAGGCAGAGACGAGGG+AGG | + | chr3_4:78932675-78932694 | Msa0525400:intron | 60.0% | |
AGAGAGGCAGAGACGAGGGA+GGG | + | chr3_4:78932676-78932695 | Msa0525400:intron | 60.0% | |
TCACGAGCCTCAACAAGGCC+AGG | + | chr3_4:78935228-78935247 | Msa0525400:CDS | 60.0% | |
GCCAGCTGGTGCATCGAATG+TGG | - | chr3_4:78939404-78939423 | None:intergenic | 60.0% | |
TTGGGCTGCCCAAATGGCCG+TGG | + | chr3_4:78936183-78936202 | Msa0525400:CDS | 65.0% | |
TGGGCTGCCCAAATGGCCGT+GGG | + | chr3_4:78936184-78936203 | Msa0525400:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 78932193 | 78940253 | 78932193 | ID=Msa0525400;Name=Msa0525400 |
chr3_4 | mRNA | 78932193 | 78940253 | 78932193 | ID=Msa0525400-mRNA-1;Parent=Msa0525400;Name=Msa0525400-mRNA-1;_AED=0.05;_eAED=0.05;_QI=71|0.33|0.36|0.94|1|1|19|216|715 |
chr3_4 | exon | 78932193 | 78932428 | 78932193 | ID=Msa0525400-mRNA-1:exon:23501;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78934375 | 78934473 | 78934375 | ID=Msa0525400-mRNA-1:exon:23502;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78935154 | 78935249 | 78935154 | ID=Msa0525400-mRNA-1:exon:23503;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78935527 | 78935639 | 78935527 | ID=Msa0525400-mRNA-1:exon:23504;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78935773 | 78935839 | 78935773 | ID=Msa0525400-mRNA-1:exon:23505;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78935937 | 78936029 | 78935937 | ID=Msa0525400-mRNA-1:exon:23506;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78936121 | 78936264 | 78936121 | ID=Msa0525400-mRNA-1:exon:23507;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78936438 | 78936532 | 78936438 | ID=Msa0525400-mRNA-1:exon:23508;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78936661 | 78936766 | 78936661 | ID=Msa0525400-mRNA-1:exon:23509;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78936863 | 78936947 | 78936863 | ID=Msa0525400-mRNA-1:exon:23510;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78937030 | 78937148 | 78937030 | ID=Msa0525400-mRNA-1:exon:23511;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78937329 | 78937487 | 78937329 | ID=Msa0525400-mRNA-1:exon:23512;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78937658 | 78937839 | 78937658 | ID=Msa0525400-mRNA-1:exon:23513;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78937961 | 78938052 | 78937961 | ID=Msa0525400-mRNA-1:exon:23514;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78938229 | 78938338 | 78938229 | ID=Msa0525400-mRNA-1:exon:23515;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78938643 | 78938735 | 78938643 | ID=Msa0525400-mRNA-1:exon:23516;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78938994 | 78939098 | 78938994 | ID=Msa0525400-mRNA-1:exon:23517;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78939400 | 78939545 | 78939400 | ID=Msa0525400-mRNA-1:exon:23518;Parent=Msa0525400-mRNA-1 |
chr3_4 | exon | 78939959 | 78940253 | 78939959 | ID=Msa0525400-mRNA-1:exon:23519;Parent=Msa0525400-mRNA-1 |
chr3_4 | five_prime_UTR | 78932193 | 78932263 | 78932193 | ID=Msa0525400-mRNA-1:five_prime_utr;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78932264 | 78932428 | 78932264 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78934375 | 78934473 | 78934375 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78935154 | 78935249 | 78935154 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78935527 | 78935639 | 78935527 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78935773 | 78935839 | 78935773 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78935937 | 78936029 | 78935937 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78936121 | 78936264 | 78936121 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78936438 | 78936532 | 78936438 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78936661 | 78936766 | 78936661 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78936863 | 78936947 | 78936863 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78937030 | 78937148 | 78937030 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78937329 | 78937487 | 78937329 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78937658 | 78937839 | 78937658 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78937961 | 78938052 | 78937961 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78938229 | 78938338 | 78938229 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78938643 | 78938735 | 78938643 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78938994 | 78939098 | 78938994 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78939400 | 78939545 | 78939400 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | CDS | 78939959 | 78940037 | 78939959 | ID=Msa0525400-mRNA-1:cds;Parent=Msa0525400-mRNA-1 |
chr3_4 | three_prime_UTR | 78940038 | 78940253 | 78940038 | ID=Msa0525400-mRNA-1:three_prime_utr;Parent=Msa0525400-mRNA-1 |
Gene Sequence |
Protein sequence |