AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021870 MtrunA17_Chr1g0173761 95.300 383 18 0 1 383 1 383 0.0 766
Msa0021870 MtrunA17_Chr1g0173751 86.945 383 50 0 1 383 1 383 0.0 696
Msa0021870 MtrunA17_Chr2g0292621 72.397 413 109 2 1 413 1 408 0.0 619
Msa0021870 MtrunA17_Chr2g0292611 71.642 402 92 2 3 383 22 422 0.0 605
Msa0021870 MtrunA17_Chr2g0292581 68.668 383 118 2 1 382 1 382 0.0 572
Msa0021870 MtrunA17_Chr4g0051711 59.553 403 150 5 1 394 1 399 2.45e-177 507
Msa0021870 MtrunA17_Chr4g0051701 61.026 390 141 3 1 382 1 387 4.26e-177 506
Msa0021870 MtrunA17_Chr4g0051731 62.125 367 136 2 17 383 1 364 8.64e-177 504
Msa0021870 MtrunA17_Chr4g0051821 60.358 391 143 4 1 383 1 387 6.31e-175 501
Msa0021870 MtrunA17_Chr4g0051761 58.824 391 149 3 1 383 23 409 3.27e-174 499
Msa0021870 MtrunA17_Chr4g0051681 58.056 391 152 4 1 382 1 388 7.72e-171 491
Msa0021870 MtrunA17_Chr6g0468811 59.335 391 147 4 1 383 1 387 7.88e-169 497
Msa0021870 MtrunA17_Chr6g0468791 61.433 363 128 4 28 383 24 381 3.58e-168 483
Msa0021870 MtrunA17_Chr8g0353201 42.211 398 199 9 1 383 1 382 8.26e-115 347
Msa0021870 MtrunA17_Chr1g0180281 45.226 398 189 10 1 383 5 388 1.25e-113 344
Msa0021870 MtrunA17_Chr1g0180271 45.226 398 189 10 1 383 5 388 5.53e-113 342
Msa0021870 MtrunA17_Chr6g0487311 41.809 409 199 10 1 383 1 396 4.21e-112 340
Msa0021870 MtrunA17_Chr6g0487401 42.462 398 178 9 1 383 33 394 1.37e-111 338
Msa0021870 MtrunA17_Chr4g0051791 54.851 268 86 3 116 383 9 241 9.53e-103 311
Msa0021870 MtrunA17_Chr2g0292631 77.528 178 40 0 1 178 1 178 2.18e-97 293
Msa0021870 MtrunA17_Chr6g0471901 36.181 398 175 9 1 383 1 334 3.83e-84 266
Msa0021870 MtrunA17_Chr2g0292641 75.524 143 35 0 251 393 1 143 1.55e-70 223
Msa0021870 MtrunA17_Chr1g0162771 40.265 226 114 6 1 211 1 220 1.04e-48 168
Msa0021870 MtrunA17_Chr1g0162761 63.889 72 26 0 309 380 1 72 4.63e-29 109
Msa0021870 MtrunA17_Chr4g0051801 53.061 98 43 1 1 98 1 95 1.66e-28 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021870 AT5G61820.2 51.531 392 160 7 14 383 11 394 2.58e-135 402
Msa0021870 AT5G61820.1 51.531 392 160 7 14 383 11 394 2.58e-135 402

Find 130 sgRNAs with CRISPR-Local

Find 1745 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTCCATTTCCATATTT+TGG -0.024150 1_1:+39645976 None:intergenic
ATAATACCTGATTGGCTATT+TGG 0.105184 1_1:+39647156 None:intergenic
CAATTGGGATGTTAACTTTA+TGG 0.150822 1_1:-39646749 Msa0021870:CDS
TTCGTCTTTCTTCTTGATTC+TGG 0.177343 1_1:-39642533 Msa0021870:CDS
TTTCCACCTTGGACTGGGCT+TGG 0.273252 1_1:+39643017 None:intergenic
CATTTCTCCACATACCCTTT+TGG 0.274775 1_1:+39647000 None:intergenic
TGTAATTCAAACCCAAAATA+TGG 0.286004 1_1:-39645988 Msa0021870:CDS
CGACGTAGTGGTGACGTTTC+CGG 0.287425 1_1:+39642750 None:intergenic
GGCTCTATCAAGATACTTAA+TGG 0.299414 1_1:-39645898 Msa0021870:CDS
GCAATTGGATCAACTCTATA+TGG 0.301761 1_1:-39646301 Msa0021870:CDS
TTCCACCTTGGACTGGGCTT+GGG 0.304327 1_1:+39643018 None:intergenic
GTCTAGGGAGCATGGTAATA+TGG 0.309803 1_1:-39642920 Msa0021870:CDS
ATCAAGCAAGAAGGAGAATA+AGG 0.311754 1_1:+39642501 None:intergenic
GATTCGAAGAAGAAAGAATT+AGG 0.315732 1_1:-39642649 Msa0021870:CDS
ATCTTGCACTTGCTATTATC+AGG 0.317724 1_1:+39646832 None:intergenic
TCCTGGATTTAGTTCAATCT+TGG 0.319107 1_1:+39647347 None:intergenic
GACTGATACTTTGAAGTTAT+CGG 0.336490 1_1:-39646698 Msa0021870:CDS
ATACTGTTATGTGGATCAAT+TGG 0.351562 1_1:-39646765 Msa0021870:CDS
GCTTTGAGTCCAAATTATAA+AGG 0.356541 1_1:-39646871 Msa0021870:CDS
CTTTCTTCTTGATTCTGGTT+CGG 0.370320 1_1:-39642528 Msa0021870:CDS
TTAGGACAGTACTATGGTCT+TGG 0.373715 1_1:-39647096 Msa0021870:CDS
TTAAGAAAATAATACCTGAT+TGG 0.381244 1_1:+39647148 None:intergenic
GCGAGCTTCCCAATGCAAAA+TGG 0.381323 1_1:-39646364 Msa0021870:CDS
AATGGAGGTTATGTCATCTA+TGG 0.382620 1_1:-39646346 Msa0021870:CDS
ACATATATTCCAGACCCTTA+TGG 0.385689 1_1:-39647051 Msa0021870:CDS
CTTTGAGTCCAAATTATAAA+GGG 0.386608 1_1:-39646870 Msa0021870:CDS
TTTCTTCTTCGAATCGGATC+CGG 0.386635 1_1:+39642657 None:intergenic
CTAGCACTAGTGTTCTTGTT+AGG 0.394049 1_1:-39647438 Msa0021870:CDS
AATGTAACAAAAGATGAAAA+TGG 0.403395 1_1:-39646898 Msa0021870:CDS
ACTTTATTTGAAACAAATCC+TGG 0.406209 1_1:+39647330 None:intergenic
CCTGGATTTAGTTCAATCTT+GGG 0.408000 1_1:+39647348 None:intergenic
CATCTACATACAGGTGCAAT+TGG 0.410018 1_1:-39646316 Msa0021870:CDS
CAAAAGGGTATGTGGAGAAA+TGG 0.410394 1_1:-39646999 Msa0021870:CDS
ACCTCACGATGGTTGGATCT+TGG 0.413833 1_1:+39642941 None:intergenic
TAATTCTTTCTTCTTCGAAT+CGG 0.417734 1_1:+39642651 None:intergenic
TCAAACCCAAAATATGGAAA+TGG 0.417987 1_1:-39645982 Msa0021870:CDS
ATCCAACCATCGTGAGGTCT+AGG 0.429117 1_1:-39642936 Msa0021870:CDS
GTGACACCAAATAGCCAATC+AGG 0.433825 1_1:-39647162 Msa0021870:CDS
TGTTCCTCCGGCGTGGTGGC+CGG 0.437274 1_1:-39642769 Msa0021870:CDS
AATGAGAAAGGATATGTTGT+AGG 0.440342 1_1:-39645946 Msa0021870:CDS
ATCAAACTTATCTACACCAT+TGG 0.445662 1_1:-39647215 Msa0021870:CDS
TTGAGTGAAATATGACCTCT+TGG 0.446302 1_1:+39647288 None:intergenic
AATGGTGTAGATAAGTTTGA+TGG 0.446934 1_1:+39647217 None:intergenic
CATTCTCATTAGCTGCTACT+AGG 0.447390 1_1:-39647410 Msa0021870:CDS
ATACGAGGGGTGTGGATGAC+CGG 0.448453 1_1:-39646954 Msa0021870:CDS
TTCCGGTGAGCTTGTTCCTC+CGG 0.450555 1_1:-39642781 Msa0021870:CDS
TTACCAACTTCTATACCATA+AGG 0.456109 1_1:+39647036 None:intergenic
CCCAAGATTGAACTAAATCC+AGG 0.471202 1_1:-39647348 Msa0021870:CDS
AATCCTGCTGAAATTCCAAA+AGG 0.472130 1_1:-39647015 Msa0021870:CDS
GACAAGCATCAGAAGCTTCA+AGG 0.472696 1_1:-39644869 Msa0021870:CDS
ATTTGAAATATACTGTTATG+TGG 0.481624 1_1:-39646774 Msa0021870:CDS
CCAGGATGCACAGAGATCAT+TGG 0.485073 1_1:-39642985 Msa0021870:CDS
TTAAGTATCTTGATAGAGCC+TGG 0.486860 1_1:+39645901 None:intergenic
GATCATTGGATCAATCCAAC+TGG 0.487365 1_1:-39642971 Msa0021870:CDS
AAGTTATCGGATAAGTCTAA+AGG 0.490509 1_1:-39646685 Msa0021870:CDS
GACCCTTATGGTATAGAAGT+TGG 0.491257 1_1:-39647039 Msa0021870:CDS
TCAAATATATAAACCTTGAC+CGG 0.492889 1_1:+39646724 None:intergenic
TCAAACTTATCTACACCATT+GGG 0.498383 1_1:-39647214 Msa0021870:CDS
TATGGAAATGGAAAGGAAGC+AGG 0.499358 1_1:-39645970 Msa0021870:CDS
CCAATGATCTCTGTGCATCC+TGG 0.509192 1_1:+39642985 None:intergenic
GGATGTTAACTTTATGGTGC+CGG 0.509600 1_1:-39646743 Msa0021870:CDS
ATTGATTTCTAAAACGTGAA+AGG 0.510738 1_1:+39642699 None:intergenic
CATCAGAAGCTTCAAGGAAG+AGG 0.513840 1_1:-39644863 Msa0021870:CDS
AATACCCTAGAGAGAACAAA+AGG 0.515004 1_1:+39644829 None:intergenic
TAACTTTATGGTGCCGGTCA+AGG 0.519810 1_1:-39646737 Msa0021870:CDS
TCTTCGAATCGGATCCGGAT+CGG 0.523060 1_1:+39642662 None:intergenic
GTGTAAATGTTAGGATGGGA+AGG 0.524583 1_1:-39646016 Msa0021870:intron
AAGGAAGCAGGAAATGAGAA+AGG 0.525734 1_1:-39645958 Msa0021870:CDS
ACTTCTATACCATAAGGGTC+TGG 0.525886 1_1:+39647042 None:intergenic
TACCAACTTCTATACCATAA+GGG 0.529409 1_1:+39647037 None:intergenic
GACGTTTCCGGCCACCACGC+CGG 0.531563 1_1:+39642762 None:intergenic
TACGAGGGGTGTGGATGACC+GGG 0.533482 1_1:-39646953 Msa0021870:CDS
CGCCGGAGGAACAAGCTCAC+CGG 0.537283 1_1:+39642779 None:intergenic
ATCTTGATAGAGCCTGGTTG+AGG 0.538946 1_1:+39645907 None:intergenic
GGAGTTGGTCATCTACATAC+AGG 0.539806 1_1:-39646325 Msa0021870:CDS
TGGATCAACTCTATATGGAC+AGG 0.540193 1_1:-39646296 Msa0021870:intron
ACTGTCCTAAAATATCCTCT+TGG 0.543744 1_1:+39647109 None:intergenic
GCTGAGCTAGTTGATGATGC+AGG 0.547375 1_1:-39647255 Msa0021870:CDS
TACTGTTATGTGGATCAATT+GGG 0.551588 1_1:-39646764 Msa0021870:CDS
AGCTTGTTCCTCCGGCGTGG+TGG 0.554647 1_1:-39642773 Msa0021870:CDS
TGCAATCGATACGAGGGGTG+TGG 0.555739 1_1:-39646962 Msa0021870:CDS
TCCCTAGACCTCACGATGGT+TGG 0.556070 1_1:+39642934 None:intergenic
ATCAAAAGAATCAAGCAAGA+AGG 0.556365 1_1:+39642492 None:intergenic
TGGTGAAACTTTAACTCTAG+AGG 0.557429 1_1:-39645878 Msa0021870:intron
GTGCGGCACCGTCGAAAGAG+AGG 0.557849 1_1:+39642565 None:intergenic
TTCCACGAAAATCACCGATC+CGG 0.561198 1_1:-39642676 Msa0021870:CDS
CGAAATTACCTCTCTTTCGA+CGG 0.561593 1_1:-39642573 Msa0021870:CDS
GATCTTGGATCCGATCCAGT+TGG 0.564391 1_1:+39642956 None:intergenic
GGTTATGTCATCTATGGAGT+TGG 0.568181 1_1:-39646340 Msa0021870:CDS
TCCAACCATCGTGAGGTCTA+GGG 0.569769 1_1:-39642935 Msa0021870:CDS
AGCAAGTGCAAGATGAGGAA+AGG 0.579934 1_1:-39646823 Msa0021870:CDS
ATCCTGCTGAAATTCCAAAA+GGG 0.582436 1_1:-39647014 Msa0021870:CDS
CCCAAAATATGGAAATGGAA+AGG 0.583875 1_1:-39645977 Msa0021870:CDS
AGGGAGCATGGTAATATGGT+AGG 0.585601 1_1:-39642916 Msa0021870:intron
TTGGATCAATCCAACTGGAT+CGG 0.589934 1_1:-39642966 Msa0021870:CDS
GAGTATAAAGCATGATTGCA+AGG 0.590917 1_1:-39646659 Msa0021870:intron
TGTAGATAAGTTTGATGGAG+AGG 0.591197 1_1:+39647222 None:intergenic
TGAAATTCCAAAAGGGTATG+TGG 0.598204 1_1:-39647007 Msa0021870:CDS
TTGAGTCCAAATTATAAAGG+GGG 0.598573 1_1:-39646868 Msa0021870:CDS
AAAAGTAATGTGAGTGATAG+CGG 0.599635 1_1:-39646406 Msa0021870:CDS
TGATGATTGTATCTCAGCAA+TGG 0.599743 1_1:-39647479 Msa0021870:CDS
GAGGGGTGTGGATGACCGGG+TGG 0.602914 1_1:-39646950 Msa0021870:CDS
AAGACGAAGCGGAAATTGTG+CGG 0.606284 1_1:+39642548 None:intergenic
ATCGTGAGGTCTAGGGAGCA+TGG 0.610036 1_1:-39642928 Msa0021870:CDS
TCCACTTGTTATCCTCAACC+AGG 0.612933 1_1:-39645919 Msa0021870:CDS
TTTGAGTCCAAATTATAAAG+GGG 0.613614 1_1:-39646869 Msa0021870:CDS
AAGCTAGCAGTATAATGCAA+AGG 0.618354 1_1:-39644891 Msa0021870:CDS
AGGGGTGTGGATGACCGGGT+GGG 0.618532 1_1:-39646949 Msa0021870:CDS
TGTTCATGCAATCGATACGA+GGG 0.626601 1_1:-39646968 Msa0021870:CDS
ACAGTACTATGGTCTTGGAT+CGG 0.628815 1_1:-39647091 Msa0021870:CDS
TAAGGCCCAAGCCCAGTCCA+AGG 0.630888 1_1:-39643023 Msa0021870:CDS
GATCTTGAACTCCGACGTAG+TGG 0.632958 1_1:+39642738 None:intergenic
AATCAAGAAGAAAGACGAAG+CGG 0.634001 1_1:+39642537 None:intergenic
ATGTTCATGCAATCGATACG+AGG 0.634237 1_1:-39646969 Msa0021870:CDS
GTTTCCGGCCACCACGCCGG+AGG 0.636622 1_1:+39642765 None:intergenic
CTGAGCTAGTTGATGATGCA+GGG 0.637972 1_1:-39647254 Msa0021870:CDS
TATGATGTTGAGTTTCCAAG+AGG 0.638000 1_1:-39647303 Msa0021870:CDS
GTGAGCTTGTTCCTCCGGCG+TGG 0.641048 1_1:-39642776 Msa0021870:CDS
GCCTGGTTGAGGATAACAAG+TGG 0.643762 1_1:+39645918 None:intergenic
ATAATAGCAAGTGCAAGATG+AGG 0.647427 1_1:-39646828 Msa0021870:CDS
TCCAAGATCCAACCATCGTG+AGG 0.650011 1_1:-39642942 Msa0021870:CDS
GGTATCTTATAACAACCCAA+TGG 0.650069 1_1:+39647199 None:intergenic
AGCTTCCCAATGCAAAATGG+AGG 0.656715 1_1:-39646361 Msa0021870:CDS
ACCCTAGAGAGAACAAAAGG+AGG 0.670093 1_1:+39644832 None:intergenic
GGCCCAAGCCCAGTCCAAGG+TGG 0.670194 1_1:-39643020 Msa0021870:CDS
AGCACTCAATACATCCCACC+CGG 0.673193 1_1:+39646935 None:intergenic
GAAAGAAGTACAGATAACGA+TGG 0.706588 1_1:-39642599 Msa0021870:CDS
CGGAAACGTCACCACTACGT+CGG 0.709565 1_1:-39642749 Msa0021870:CDS
GTTCATGCAATCGATACGAG+GGG 0.710026 1_1:-39646967 Msa0021870:CDS
ATGCTCCCTAGACCTCACGA+TGG 0.745270 1_1:+39642930 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTCTTAAGAAATAA+TGG - chr1_1:39642844-39642863 Msa0021870:intron 10.0%
!!! TTTATTTTTTTTAAATGTCT+CGG + chr1_1:39644429-39644448 None:intergenic 10.0%
!!! AACAAAAACAAAAATATTTT+TGG + chr1_1:39645552-39645571 None:intergenic 10.0%
!!! AAAAATATTTTTGTTTTTGT+TGG - chr1_1:39645551-39645570 Msa0021870:intron 10.0%
!!! ATTATTTTCTTAAGAAATAA+TGG - chr1_1:39642844-39642863 Msa0021870:intron 10.0%
!!! TTTATTTTTTTTAAATGTCT+CGG + chr1_1:39644429-39644448 None:intergenic 10.0%
!!! AACAAAAACAAAAATATTTT+TGG + chr1_1:39645552-39645571 None:intergenic 10.0%
!!! AAAAATATTTTTGTTTTTGT+TGG - chr1_1:39645551-39645570 Msa0021870:intron 10.0%
!!! ATTATTTTCTTAAGAAATAA+TGG - chr1_1:39642844-39642863 Msa0021870:intron 10.0%
!!! TTTATTTTTTTTAAATGTCT+CGG + chr1_1:39644429-39644448 None:intergenic 10.0%
!!! AACAAAAACAAAAATATTTT+TGG + chr1_1:39645552-39645571 None:intergenic 10.0%
!!! AAAAATATTTTTGTTTTTGT+TGG - chr1_1:39645551-39645570 Msa0021870:intron 10.0%
!!! ATTATTTTCTTAAGAAATAA+TGG - chr1_1:39642844-39642863 Msa0021870:intron 10.0%
!!! TTTATTTTTTTTAAATGTCT+CGG + chr1_1:39644429-39644448 None:intergenic 10.0%
!!! AACAAAAACAAAAATATTTT+TGG + chr1_1:39645552-39645571 None:intergenic 10.0%
!!! AAAAATATTTTTGTTTTTGT+TGG - chr1_1:39645551-39645570 Msa0021870:intron 10.0%
!!! ATTATTTTCTTAAGAAATAA+TGG - chr1_1:39642844-39642863 Msa0021870:intron 10.0%
!!! TTTATTTTTTTTAAATGTCT+CGG + chr1_1:39644429-39644448 None:intergenic 10.0%
!!! AACAAAAACAAAAATATTTT+TGG + chr1_1:39645552-39645571 None:intergenic 10.0%
!!! AAAAATATTTTTGTTTTTGT+TGG - chr1_1:39645551-39645570 Msa0021870:intron 10.0%
!!! TCAAATAGATGTTTTTTTTT+GGG + chr1_1:39643194-39643213 None:intergenic 15.0%
!!! TTCAAATAGATGTTTTTTTT+TGG + chr1_1:39643195-39643214 None:intergenic 15.0%
!!! AAATTTTCACTTTTTTTCAT+AGG - chr1_1:39643834-39643853 Msa0021870:intron 15.0%
!!! TCTTTAAAATCATATCATTT+TGG - chr1_1:39643941-39643960 Msa0021870:intron 15.0%
!!! TTATTTTTTTTAAATGTCTC+GGG + chr1_1:39644428-39644447 None:intergenic 15.0%
!!! TATGTTATTTTATAGATGTT+TGG - chr1_1:39644458-39644477 Msa0021870:intron 15.0%
!! AAAAAAATTCAAAACACTTA+TGG + chr1_1:39644682-39644701 None:intergenic 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG - chr1_1:39645469-39645488 Msa0021870:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+TGG - chr1_1:39645574-39645593 Msa0021870:intron 15.0%
!!! CTTTACATTCTAATTTTTTT+TGG - chr1_1:39646040-39646059 Msa0021870:intron 15.0%
!! ATTATTATGAATCAAACAAA+TGG - chr1_1:39646525-39646544 Msa0021870:intron 15.0%
!!! TCAAATAGATGTTTTTTTTT+GGG + chr1_1:39643194-39643213 None:intergenic 15.0%
!!! TTCAAATAGATGTTTTTTTT+TGG + chr1_1:39643195-39643214 None:intergenic 15.0%
!!! AAATTTTCACTTTTTTTCAT+AGG - chr1_1:39643834-39643853 Msa0021870:intron 15.0%
!!! TCTTTAAAATCATATCATTT+TGG - chr1_1:39643941-39643960 Msa0021870:intron 15.0%
!!! TTATTTTTTTTAAATGTCTC+GGG + chr1_1:39644428-39644447 None:intergenic 15.0%
!!! TATGTTATTTTATAGATGTT+TGG - chr1_1:39644458-39644477 Msa0021870:intron 15.0%
!! AAAAAAATTCAAAACACTTA+TGG + chr1_1:39644682-39644701 None:intergenic 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG - chr1_1:39645469-39645488 Msa0021870:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+TGG - chr1_1:39645574-39645593 Msa0021870:intron 15.0%
!!! CTTTACATTCTAATTTTTTT+TGG - chr1_1:39646040-39646059 Msa0021870:intron 15.0%
!! ATTATTATGAATCAAACAAA+TGG - chr1_1:39646525-39646544 Msa0021870:intron 15.0%
!!! TCAAATAGATGTTTTTTTTT+GGG + chr1_1:39643194-39643213 None:intergenic 15.0%
!!! TTCAAATAGATGTTTTTTTT+TGG + chr1_1:39643195-39643214 None:intergenic 15.0%
!!! AAATTTTCACTTTTTTTCAT+AGG - chr1_1:39643834-39643853 Msa0021870:intron 15.0%
!!! TCTTTAAAATCATATCATTT+TGG - chr1_1:39643941-39643960 Msa0021870:intron 15.0%
!!! TTATTTTTTTTAAATGTCTC+GGG + chr1_1:39644428-39644447 None:intergenic 15.0%
!!! TATGTTATTTTATAGATGTT+TGG - chr1_1:39644458-39644477 Msa0021870:intron 15.0%
!! AAAAAAATTCAAAACACTTA+TGG + chr1_1:39644682-39644701 None:intergenic 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG - chr1_1:39645469-39645488 Msa0021870:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+TGG - chr1_1:39645574-39645593 Msa0021870:intron 15.0%
!!! CTTTACATTCTAATTTTTTT+TGG - chr1_1:39646040-39646059 Msa0021870:intron 15.0%
!! ATTATTATGAATCAAACAAA+TGG - chr1_1:39646525-39646544 Msa0021870:intron 15.0%
!!! TCAAATAGATGTTTTTTTTT+GGG + chr1_1:39643194-39643213 None:intergenic 15.0%
!!! TTCAAATAGATGTTTTTTTT+TGG + chr1_1:39643195-39643214 None:intergenic 15.0%
!!! AAATTTTCACTTTTTTTCAT+AGG - chr1_1:39643834-39643853 Msa0021870:intron 15.0%
!!! TCTTTAAAATCATATCATTT+TGG - chr1_1:39643941-39643960 Msa0021870:intron 15.0%
!!! TTATTTTTTTTAAATGTCTC+GGG + chr1_1:39644428-39644447 None:intergenic 15.0%
!!! TATGTTATTTTATAGATGTT+TGG - chr1_1:39644458-39644477 Msa0021870:intron 15.0%
!! AAAAAAATTCAAAACACTTA+TGG + chr1_1:39644682-39644701 None:intergenic 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG - chr1_1:39645469-39645488 Msa0021870:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+TGG - chr1_1:39645574-39645593 Msa0021870:intron 15.0%
!!! CTTTACATTCTAATTTTTTT+TGG - chr1_1:39646040-39646059 Msa0021870:intron 15.0%
!! ATTATTATGAATCAAACAAA+TGG - chr1_1:39646525-39646544 Msa0021870:intron 15.0%
!!! TCAAATAGATGTTTTTTTTT+GGG + chr1_1:39643194-39643213 None:intergenic 15.0%
!!! TTCAAATAGATGTTTTTTTT+TGG + chr1_1:39643195-39643214 None:intergenic 15.0%
!!! AAATTTTCACTTTTTTTCAT+AGG - chr1_1:39643834-39643853 Msa0021870:intron 15.0%
!!! TCTTTAAAATCATATCATTT+TGG - chr1_1:39643941-39643960 Msa0021870:intron 15.0%
!!! TTATTTTTTTTAAATGTCTC+GGG + chr1_1:39644428-39644447 None:intergenic 15.0%
!!! TATGTTATTTTATAGATGTT+TGG - chr1_1:39644458-39644477 Msa0021870:intron 15.0%
!! AAAAAAATTCAAAACACTTA+TGG + chr1_1:39644682-39644701 None:intergenic 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG - chr1_1:39645469-39645488 Msa0021870:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+TGG - chr1_1:39645574-39645593 Msa0021870:intron 15.0%
!!! CTTTACATTCTAATTTTTTT+TGG - chr1_1:39646040-39646059 Msa0021870:intron 15.0%
!! ATTATTATGAATCAAACAAA+TGG - chr1_1:39646525-39646544 Msa0021870:intron 15.0%
!! TTAAGAAAATAATACCTGAT+TGG + chr1_1:39642837-39642856 None:intergenic 20.0%
!! AATGTAACAAAAGATGAAAA+TGG - chr1_1:39643084-39643103 Msa0021870:intron 20.0%
!!! ATTTGAAATATACTGTTATG+TGG - chr1_1:39643208-39643227 Msa0021870:intron 20.0%
!!! TTATTGTTTTACATTGTCTA+TGG - chr1_1:39643388-39643407 Msa0021870:intron 20.0%
!!! TAAATTTGAGATCATTAAGT+AGG + chr1_1:39643428-39643447 None:intergenic 20.0%
!! AGAGATTATTCTTTAAATAC+AGG - chr1_1:39643527-39643546 Msa0021870:intron 20.0%
!!! TAACTCCTTTGTAATTTTAA+GGG + chr1_1:39643813-39643832 None:intergenic 20.0%
!!! ATAACTCCTTTGTAATTTTA+AGG + chr1_1:39643814-39643833 None:intergenic 20.0%
!! AACAAAGTAATCAAAATGAT+AGG + chr1_1:39644223-39644242 None:intergenic 20.0%
!!! TGATTACTTTGTTATCAAAA+TGG - chr1_1:39644230-39644249 Msa0021870:intron 20.0%
!! TACAATAAAAACAAATTCTG+AGG + chr1_1:39644260-39644279 None:intergenic 20.0%
!! AAGATATCCAACAAAAATAT+GGG + chr1_1:39644372-39644391 None:intergenic 20.0%
!! TAAGATATCCAACAAAAATA+TGG + chr1_1:39644373-39644392 None:intergenic 20.0%
!!! TATTGTTTTATCTTGGTTTT+CGG - chr1_1:39645172-39645191 Msa0021870:intron 20.0%
!! AAGAAAAAATAAGATATCAC+CGG + chr1_1:39645232-39645251 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTCTT+GGG - chr1_1:39645232-39645251 Msa0021870:intron 20.0%
!! TTTGATTAAGAAAGTGAAAA+AGG - chr1_1:39645705-39645724 Msa0021870:intron 20.0%
!!! TCATTTTCAAAATAAACCTT+GGG + chr1_1:39645752-39645771 None:intergenic 20.0%
!!! ATCATTTTCAAAATAAACCT+TGG + chr1_1:39645753-39645772 None:intergenic 20.0%
!!! TTTTTCTAAGTATATTTCCT+AGG - chr1_1:39645811-39645830 Msa0021870:intron 20.0%
!! GCAAAAAATTAAAAGACATA+AGG - chr1_1:39645993-39646012 Msa0021870:CDS 20.0%
!! AAATTAGAATGTAAAGACTT+AGG + chr1_1:39646036-39646055 None:intergenic 20.0%
!! TATGTGAATTAGTGTAAAAT+TGG + chr1_1:39646391-39646410 None:intergenic 20.0%
!! TGTTTGATTCATAATAATTG+TGG + chr1_1:39646523-39646542 None:intergenic 20.0%
!! CAAAAAAAACTTCACAAAAT+TGG - chr1_1:39646560-39646579 Msa0021870:intron 20.0%
!! AAATTGTTAGAGAAAATACA+TGG + chr1_1:39646616-39646635 None:intergenic 20.0%
!! TTAAGAAAATAATACCTGAT+TGG + chr1_1:39642837-39642856 None:intergenic 20.0%
!! AATGTAACAAAAGATGAAAA+TGG - chr1_1:39643084-39643103 Msa0021870:intron 20.0%
!!! ATTTGAAATATACTGTTATG+TGG - chr1_1:39643208-39643227 Msa0021870:intron 20.0%
!!! TTATTGTTTTACATTGTCTA+TGG - chr1_1:39643388-39643407 Msa0021870:intron 20.0%
!!! TAAATTTGAGATCATTAAGT+AGG + chr1_1:39643428-39643447 None:intergenic 20.0%
!! AGAGATTATTCTTTAAATAC+AGG - chr1_1:39643527-39643546 Msa0021870:intron 20.0%
!!! TAACTCCTTTGTAATTTTAA+GGG + chr1_1:39643813-39643832 None:intergenic 20.0%
!!! ATAACTCCTTTGTAATTTTA+AGG + chr1_1:39643814-39643833 None:intergenic 20.0%
!! AACAAAGTAATCAAAATGAT+AGG + chr1_1:39644223-39644242 None:intergenic 20.0%
!!! TGATTACTTTGTTATCAAAA+TGG - chr1_1:39644230-39644249 Msa0021870:intron 20.0%
!! TACAATAAAAACAAATTCTG+AGG + chr1_1:39644260-39644279 None:intergenic 20.0%
!! AAGATATCCAACAAAAATAT+GGG + chr1_1:39644372-39644391 None:intergenic 20.0%
!! TAAGATATCCAACAAAAATA+TGG + chr1_1:39644373-39644392 None:intergenic 20.0%
!!! TATTGTTTTATCTTGGTTTT+CGG - chr1_1:39645172-39645191 Msa0021870:intron 20.0%
!! AAGAAAAAATAAGATATCAC+CGG + chr1_1:39645232-39645251 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTCTT+GGG - chr1_1:39645232-39645251 Msa0021870:intron 20.0%
!! TTTGATTAAGAAAGTGAAAA+AGG - chr1_1:39645705-39645724 Msa0021870:intron 20.0%
!!! TCATTTTCAAAATAAACCTT+GGG + chr1_1:39645752-39645771 None:intergenic 20.0%
!!! ATCATTTTCAAAATAAACCT+TGG + chr1_1:39645753-39645772 None:intergenic 20.0%
!!! TTTTTCTAAGTATATTTCCT+AGG - chr1_1:39645811-39645830 Msa0021870:intron 20.0%
!! GCAAAAAATTAAAAGACATA+AGG - chr1_1:39645993-39646012 Msa0021870:CDS 20.0%
!! AAATTAGAATGTAAAGACTT+AGG + chr1_1:39646036-39646055 None:intergenic 20.0%
!! TATGTGAATTAGTGTAAAAT+TGG + chr1_1:39646391-39646410 None:intergenic 20.0%
!! TGTTTGATTCATAATAATTG+TGG + chr1_1:39646523-39646542 None:intergenic 20.0%
!! CAAAAAAAACTTCACAAAAT+TGG - chr1_1:39646560-39646579 Msa0021870:intron 20.0%
!! AAATTGTTAGAGAAAATACA+TGG + chr1_1:39646616-39646635 None:intergenic 20.0%
!! TTAAGAAAATAATACCTGAT+TGG + chr1_1:39642837-39642856 None:intergenic 20.0%
!! AATGTAACAAAAGATGAAAA+TGG - chr1_1:39643084-39643103 Msa0021870:intron 20.0%
!!! ATTTGAAATATACTGTTATG+TGG - chr1_1:39643208-39643227 Msa0021870:intron 20.0%
!!! TTATTGTTTTACATTGTCTA+TGG - chr1_1:39643388-39643407 Msa0021870:intron 20.0%
!!! TAAATTTGAGATCATTAAGT+AGG + chr1_1:39643428-39643447 None:intergenic 20.0%
!! AGAGATTATTCTTTAAATAC+AGG - chr1_1:39643527-39643546 Msa0021870:intron 20.0%
!!! TAACTCCTTTGTAATTTTAA+GGG + chr1_1:39643813-39643832 None:intergenic 20.0%
!!! ATAACTCCTTTGTAATTTTA+AGG + chr1_1:39643814-39643833 None:intergenic 20.0%
!! AACAAAGTAATCAAAATGAT+AGG + chr1_1:39644223-39644242 None:intergenic 20.0%
!!! TGATTACTTTGTTATCAAAA+TGG - chr1_1:39644230-39644249 Msa0021870:intron 20.0%
!! TACAATAAAAACAAATTCTG+AGG + chr1_1:39644260-39644279 None:intergenic 20.0%
!! AAGATATCCAACAAAAATAT+GGG + chr1_1:39644372-39644391 None:intergenic 20.0%
!! TAAGATATCCAACAAAAATA+TGG + chr1_1:39644373-39644392 None:intergenic 20.0%
!!! TATTGTTTTATCTTGGTTTT+CGG - chr1_1:39645172-39645191 Msa0021870:intron 20.0%
!! AAGAAAAAATAAGATATCAC+CGG + chr1_1:39645232-39645251 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTCTT+GGG - chr1_1:39645232-39645251 Msa0021870:intron 20.0%
!! TTTGATTAAGAAAGTGAAAA+AGG - chr1_1:39645705-39645724 Msa0021870:intron 20.0%
!!! TCATTTTCAAAATAAACCTT+GGG + chr1_1:39645752-39645771 None:intergenic 20.0%
!!! ATCATTTTCAAAATAAACCT+TGG + chr1_1:39645753-39645772 None:intergenic 20.0%
!!! TTTTTCTAAGTATATTTCCT+AGG - chr1_1:39645811-39645830 Msa0021870:intron 20.0%
!! GCAAAAAATTAAAAGACATA+AGG - chr1_1:39645993-39646012 Msa0021870:CDS 20.0%
!! AAATTAGAATGTAAAGACTT+AGG + chr1_1:39646036-39646055 None:intergenic 20.0%
!! TATGTGAATTAGTGTAAAAT+TGG + chr1_1:39646391-39646410 None:intergenic 20.0%
!! TGTTTGATTCATAATAATTG+TGG + chr1_1:39646523-39646542 None:intergenic 20.0%
!! CAAAAAAAACTTCACAAAAT+TGG - chr1_1:39646560-39646579 Msa0021870:intron 20.0%
!! AAATTGTTAGAGAAAATACA+TGG + chr1_1:39646616-39646635 None:intergenic 20.0%
!! TTAAGAAAATAATACCTGAT+TGG + chr1_1:39642837-39642856 None:intergenic 20.0%
!! AATGTAACAAAAGATGAAAA+TGG - chr1_1:39643084-39643103 Msa0021870:intron 20.0%
!!! ATTTGAAATATACTGTTATG+TGG - chr1_1:39643208-39643227 Msa0021870:intron 20.0%
!!! TTATTGTTTTACATTGTCTA+TGG - chr1_1:39643388-39643407 Msa0021870:intron 20.0%
!!! TAAATTTGAGATCATTAAGT+AGG + chr1_1:39643428-39643447 None:intergenic 20.0%
!! AGAGATTATTCTTTAAATAC+AGG - chr1_1:39643527-39643546 Msa0021870:intron 20.0%
!!! TAACTCCTTTGTAATTTTAA+GGG + chr1_1:39643813-39643832 None:intergenic 20.0%
!!! ATAACTCCTTTGTAATTTTA+AGG + chr1_1:39643814-39643833 None:intergenic 20.0%
!! AACAAAGTAATCAAAATGAT+AGG + chr1_1:39644223-39644242 None:intergenic 20.0%
!!! TGATTACTTTGTTATCAAAA+TGG - chr1_1:39644230-39644249 Msa0021870:intron 20.0%
!! TACAATAAAAACAAATTCTG+AGG + chr1_1:39644260-39644279 None:intergenic 20.0%
!! AAGATATCCAACAAAAATAT+GGG + chr1_1:39644372-39644391 None:intergenic 20.0%
!! TAAGATATCCAACAAAAATA+TGG + chr1_1:39644373-39644392 None:intergenic 20.0%
!!! TATTGTTTTATCTTGGTTTT+CGG - chr1_1:39645172-39645191 Msa0021870:intron 20.0%
!! AAGAAAAAATAAGATATCAC+CGG + chr1_1:39645232-39645251 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTCTT+GGG - chr1_1:39645232-39645251 Msa0021870:intron 20.0%
!! TTTGATTAAGAAAGTGAAAA+AGG - chr1_1:39645705-39645724 Msa0021870:intron 20.0%
!!! TCATTTTCAAAATAAACCTT+GGG + chr1_1:39645752-39645771 None:intergenic 20.0%
!!! ATCATTTTCAAAATAAACCT+TGG + chr1_1:39645753-39645772 None:intergenic 20.0%
!!! TTTTTCTAAGTATATTTCCT+AGG - chr1_1:39645811-39645830 Msa0021870:intron 20.0%
!! GCAAAAAATTAAAAGACATA+AGG - chr1_1:39645993-39646012 Msa0021870:CDS 20.0%
!! AAATTAGAATGTAAAGACTT+AGG + chr1_1:39646036-39646055 None:intergenic 20.0%
!! TATGTGAATTAGTGTAAAAT+TGG + chr1_1:39646391-39646410 None:intergenic 20.0%
!! TGTTTGATTCATAATAATTG+TGG + chr1_1:39646523-39646542 None:intergenic 20.0%
!! CAAAAAAAACTTCACAAAAT+TGG - chr1_1:39646560-39646579 Msa0021870:intron 20.0%
!! AAATTGTTAGAGAAAATACA+TGG + chr1_1:39646616-39646635 None:intergenic 20.0%
!! TTAAGAAAATAATACCTGAT+TGG + chr1_1:39642837-39642856 None:intergenic 20.0%
!! AATGTAACAAAAGATGAAAA+TGG - chr1_1:39643084-39643103 Msa0021870:intron 20.0%
!!! ATTTGAAATATACTGTTATG+TGG - chr1_1:39643208-39643227 Msa0021870:intron 20.0%
!!! TTATTGTTTTACATTGTCTA+TGG - chr1_1:39643388-39643407 Msa0021870:intron 20.0%
!!! TAAATTTGAGATCATTAAGT+AGG + chr1_1:39643428-39643447 None:intergenic 20.0%
!! AGAGATTATTCTTTAAATAC+AGG - chr1_1:39643527-39643546 Msa0021870:intron 20.0%
!!! TAACTCCTTTGTAATTTTAA+GGG + chr1_1:39643813-39643832 None:intergenic 20.0%
!!! ATAACTCCTTTGTAATTTTA+AGG + chr1_1:39643814-39643833 None:intergenic 20.0%
!! AACAAAGTAATCAAAATGAT+AGG + chr1_1:39644223-39644242 None:intergenic 20.0%
!!! TGATTACTTTGTTATCAAAA+TGG - chr1_1:39644230-39644249 Msa0021870:intron 20.0%
!! TACAATAAAAACAAATTCTG+AGG + chr1_1:39644260-39644279 None:intergenic 20.0%
!! AAGATATCCAACAAAAATAT+GGG + chr1_1:39644372-39644391 None:intergenic 20.0%
!! TAAGATATCCAACAAAAATA+TGG + chr1_1:39644373-39644392 None:intergenic 20.0%
!!! TATTGTTTTATCTTGGTTTT+CGG - chr1_1:39645172-39645191 Msa0021870:intron 20.0%
!! AAGAAAAAATAAGATATCAC+CGG + chr1_1:39645232-39645251 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTCTT+GGG - chr1_1:39645232-39645251 Msa0021870:intron 20.0%
!! TTTGATTAAGAAAGTGAAAA+AGG - chr1_1:39645705-39645724 Msa0021870:intron 20.0%
!!! TCATTTTCAAAATAAACCTT+GGG + chr1_1:39645752-39645771 None:intergenic 20.0%
!!! ATCATTTTCAAAATAAACCT+TGG + chr1_1:39645753-39645772 None:intergenic 20.0%
!!! TTTTTCTAAGTATATTTCCT+AGG - chr1_1:39645811-39645830 Msa0021870:intron 20.0%
!! GCAAAAAATTAAAAGACATA+AGG - chr1_1:39645993-39646012 Msa0021870:CDS 20.0%
!! AAATTAGAATGTAAAGACTT+AGG + chr1_1:39646036-39646055 None:intergenic 20.0%
!! TATGTGAATTAGTGTAAAAT+TGG + chr1_1:39646391-39646410 None:intergenic 20.0%
!! TGTTTGATTCATAATAATTG+TGG + chr1_1:39646523-39646542 None:intergenic 20.0%
!! CAAAAAAAACTTCACAAAAT+TGG - chr1_1:39646560-39646579 Msa0021870:intron 20.0%
!! AAATTGTTAGAGAAAATACA+TGG + chr1_1:39646616-39646635 None:intergenic 20.0%
!! ACTTTATTTGAAACAAATCC+TGG + chr1_1:39642655-39642674 None:intergenic 25.0%
!! CATCTTTTGTTACATTGTAT+AGG + chr1_1:39643080-39643099 None:intergenic 25.0%
! CTTTGAGTCCAAATTATAAA+GGG - chr1_1:39643112-39643131 Msa0021870:intron 25.0%
! TTTGAGTCCAAATTATAAAG+GGG - chr1_1:39643113-39643132 Msa0021870:intron 25.0%
! TCAAATATATAAACCTTGAC+CGG + chr1_1:39643261-39643280 None:intergenic 25.0%
! ACTAGAAGTAGAAAATAGTA+TGG + chr1_1:39643746-39643765 None:intergenic 25.0%
! TTACTCCCTTAAAATTACAA+AGG - chr1_1:39643805-39643824 Msa0021870:intron 25.0%
!!! ATTTTGGTTGTGTAAATGTT+AGG - chr1_1:39643957-39643976 Msa0021870:intron 25.0%
! TGTAATTCAAACCCAAAATA+TGG - chr1_1:39643994-39644013 Msa0021870:intron 25.0%
!! AATAAAAACAAATTCTGAGG+TGG + chr1_1:39644257-39644276 None:intergenic 25.0%
! AGATATCCAACAAAAATATG+GGG + chr1_1:39644371-39644390 None:intergenic 25.0%
! TTCATTAGAGGAATTGTTAA+TGG - chr1_1:39644587-39644606 Msa0021870:intron 25.0%
! TTATAGTGCATGATTACTTA+GGG + chr1_1:39645036-39645055 None:intergenic 25.0%
! TTTATAGTGCATGATTACTT+AGG + chr1_1:39645037-39645056 None:intergenic 25.0%
!!! ATTGTTTTATCTTGGTTTTC+GGG - chr1_1:39645173-39645192 Msa0021870:intron 25.0%
!!! GGTGATATCTTATTTTTTCT+TGG - chr1_1:39645231-39645250 Msa0021870:intron 25.0%
!!! TATCTTATTTTTTCTTGGGA+AGG - chr1_1:39645236-39645255 Msa0021870:intron 25.0%
!!! ATCTTATTTTTTCTTGGGAA+GGG - chr1_1:39645237-39645256 Msa0021870:intron 25.0%
! TCTTCACTTAGAATATTCTT+AGG + chr1_1:39645422-39645441 None:intergenic 25.0%
! GAATATTCTAAGTGAAGAAT+TGG - chr1_1:39645424-39645443 Msa0021870:intron 25.0%
!!! ATATTTTTGGAAGAGAACTA+CGG + chr1_1:39645539-39645558 None:intergenic 25.0%
! AATTAGTTATTTGCAAAGTG+TGG - chr1_1:39645655-39645674 Msa0021870:intron 25.0%
! AGTGAAAAAGGAAAATTCAA+TGG - chr1_1:39645717-39645736 Msa0021870:intron 25.0%
! GTGAAAAAGGAAAATTCAAT+GGG - chr1_1:39645718-39645737 Msa0021870:intron 25.0%
!!! GAAGTTTGTTCATATTTTCT+TGG - chr1_1:39645779-39645798 Msa0021870:intron 25.0%
! CTTATGAAACAATGAACAAA+GGG - chr1_1:39646126-39646145 Msa0021870:intron 25.0%
! GCATTGAATAGTAAGAAAAA+AGG - chr1_1:39646162-39646181 Msa0021870:intron 25.0%
! TTGAATAGTAAGAAAAAAGG+TGG - chr1_1:39646165-39646184 Msa0021870:intron 25.0%
! TGGTAAAAAACAACAAAAAG+TGG - chr1_1:39646211-39646230 Msa0021870:intron 25.0%
!!! TGTTTTGAATGTGTGATAAT+TGG + chr1_1:39646447-39646466 None:intergenic 25.0%
!!! AATAATTTTGGGGTATCATT+TGG + chr1_1:39646493-39646512 None:intergenic 25.0%
!!! TGGTTTGTTGAATAATTTTG+GGG + chr1_1:39646503-39646522 None:intergenic 25.0%
!!! GTGGTTTGTTGAATAATTTT+GGG + chr1_1:39646504-39646523 None:intergenic 25.0%
!!! TGTGGTTTGTTGAATAATTT+TGG + chr1_1:39646505-39646524 None:intergenic 25.0%
! CAAAGCAAAAAATAATTCTC+CGG - chr1_1:39646760-39646779 Msa0021870:CDS 25.0%
!!! TTGCTATTTTCGTTTTTTAG+TGG + chr1_1:39646934-39646953 None:intergenic 25.0%
!!! ATTGATTTCTAAAACGTGAA+AGG + chr1_1:39647286-39647305 None:intergenic 25.0%
! TAATTCTTTCTTCTTCGAAT+CGG + chr1_1:39647334-39647353 None:intergenic 25.0%
!! ACTTTATTTGAAACAAATCC+TGG + chr1_1:39642655-39642674 None:intergenic 25.0%
!! CATCTTTTGTTACATTGTAT+AGG + chr1_1:39643080-39643099 None:intergenic 25.0%
! CTTTGAGTCCAAATTATAAA+GGG - chr1_1:39643112-39643131 Msa0021870:intron 25.0%
! TTTGAGTCCAAATTATAAAG+GGG - chr1_1:39643113-39643132 Msa0021870:intron 25.0%
! TCAAATATATAAACCTTGAC+CGG + chr1_1:39643261-39643280 None:intergenic 25.0%
! ACTAGAAGTAGAAAATAGTA+TGG + chr1_1:39643746-39643765 None:intergenic 25.0%
! TTACTCCCTTAAAATTACAA+AGG - chr1_1:39643805-39643824 Msa0021870:intron 25.0%
!!! ATTTTGGTTGTGTAAATGTT+AGG - chr1_1:39643957-39643976 Msa0021870:intron 25.0%
! TGTAATTCAAACCCAAAATA+TGG - chr1_1:39643994-39644013 Msa0021870:intron 25.0%
!! AATAAAAACAAATTCTGAGG+TGG + chr1_1:39644257-39644276 None:intergenic 25.0%
! AGATATCCAACAAAAATATG+GGG + chr1_1:39644371-39644390 None:intergenic 25.0%
! TTCATTAGAGGAATTGTTAA+TGG - chr1_1:39644587-39644606 Msa0021870:intron 25.0%
! TTATAGTGCATGATTACTTA+GGG + chr1_1:39645036-39645055 None:intergenic 25.0%
! TTTATAGTGCATGATTACTT+AGG + chr1_1:39645037-39645056 None:intergenic 25.0%
!!! ATTGTTTTATCTTGGTTTTC+GGG - chr1_1:39645173-39645192 Msa0021870:intron 25.0%
!!! GGTGATATCTTATTTTTTCT+TGG - chr1_1:39645231-39645250 Msa0021870:intron 25.0%
!!! TATCTTATTTTTTCTTGGGA+AGG - chr1_1:39645236-39645255 Msa0021870:intron 25.0%
!!! ATCTTATTTTTTCTTGGGAA+GGG - chr1_1:39645237-39645256 Msa0021870:intron 25.0%
! TCTTCACTTAGAATATTCTT+AGG + chr1_1:39645422-39645441 None:intergenic 25.0%
! GAATATTCTAAGTGAAGAAT+TGG - chr1_1:39645424-39645443 Msa0021870:intron 25.0%
!!! ATATTTTTGGAAGAGAACTA+CGG + chr1_1:39645539-39645558 None:intergenic 25.0%
! AATTAGTTATTTGCAAAGTG+TGG - chr1_1:39645655-39645674 Msa0021870:intron 25.0%
! AGTGAAAAAGGAAAATTCAA+TGG - chr1_1:39645717-39645736 Msa0021870:intron 25.0%
! GTGAAAAAGGAAAATTCAAT+GGG - chr1_1:39645718-39645737 Msa0021870:intron 25.0%
!!! GAAGTTTGTTCATATTTTCT+TGG - chr1_1:39645779-39645798 Msa0021870:intron 25.0%
! CTTATGAAACAATGAACAAA+GGG - chr1_1:39646126-39646145 Msa0021870:intron 25.0%
! GCATTGAATAGTAAGAAAAA+AGG - chr1_1:39646162-39646181 Msa0021870:intron 25.0%
! TTGAATAGTAAGAAAAAAGG+TGG - chr1_1:39646165-39646184 Msa0021870:intron 25.0%
! TGGTAAAAAACAACAAAAAG+TGG - chr1_1:39646211-39646230 Msa0021870:intron 25.0%
!!! TGTTTTGAATGTGTGATAAT+TGG + chr1_1:39646447-39646466 None:intergenic 25.0%
!!! AATAATTTTGGGGTATCATT+TGG + chr1_1:39646493-39646512 None:intergenic 25.0%
!!! TGGTTTGTTGAATAATTTTG+GGG + chr1_1:39646503-39646522 None:intergenic 25.0%
!!! GTGGTTTGTTGAATAATTTT+GGG + chr1_1:39646504-39646523 None:intergenic 25.0%
!!! TGTGGTTTGTTGAATAATTT+TGG + chr1_1:39646505-39646524 None:intergenic 25.0%
! CAAAGCAAAAAATAATTCTC+CGG - chr1_1:39646760-39646779 Msa0021870:CDS 25.0%
!!! TTGCTATTTTCGTTTTTTAG+TGG + chr1_1:39646934-39646953 None:intergenic 25.0%
!!! ATTGATTTCTAAAACGTGAA+AGG + chr1_1:39647286-39647305 None:intergenic 25.0%
! TAATTCTTTCTTCTTCGAAT+CGG + chr1_1:39647334-39647353 None:intergenic 25.0%
!! ACTTTATTTGAAACAAATCC+TGG + chr1_1:39642655-39642674 None:intergenic 25.0%
!! CATCTTTTGTTACATTGTAT+AGG + chr1_1:39643080-39643099 None:intergenic 25.0%
! CTTTGAGTCCAAATTATAAA+GGG - chr1_1:39643112-39643131 Msa0021870:intron 25.0%
! TTTGAGTCCAAATTATAAAG+GGG - chr1_1:39643113-39643132 Msa0021870:intron 25.0%
! TCAAATATATAAACCTTGAC+CGG + chr1_1:39643261-39643280 None:intergenic 25.0%
! ACTAGAAGTAGAAAATAGTA+TGG + chr1_1:39643746-39643765 None:intergenic 25.0%
! TTACTCCCTTAAAATTACAA+AGG - chr1_1:39643805-39643824 Msa0021870:intron 25.0%
!!! ATTTTGGTTGTGTAAATGTT+AGG - chr1_1:39643957-39643976 Msa0021870:intron 25.0%
! TGTAATTCAAACCCAAAATA+TGG - chr1_1:39643994-39644013 Msa0021870:intron 25.0%
!! AATAAAAACAAATTCTGAGG+TGG + chr1_1:39644257-39644276 None:intergenic 25.0%
! AGATATCCAACAAAAATATG+GGG + chr1_1:39644371-39644390 None:intergenic 25.0%
! TTCATTAGAGGAATTGTTAA+TGG - chr1_1:39644587-39644606 Msa0021870:intron 25.0%
! TTATAGTGCATGATTACTTA+GGG + chr1_1:39645036-39645055 None:intergenic 25.0%
! TTTATAGTGCATGATTACTT+AGG + chr1_1:39645037-39645056 None:intergenic 25.0%
!!! ATTGTTTTATCTTGGTTTTC+GGG - chr1_1:39645173-39645192 Msa0021870:intron 25.0%
!!! GGTGATATCTTATTTTTTCT+TGG - chr1_1:39645231-39645250 Msa0021870:intron 25.0%
!!! TATCTTATTTTTTCTTGGGA+AGG - chr1_1:39645236-39645255 Msa0021870:intron 25.0%
!!! ATCTTATTTTTTCTTGGGAA+GGG - chr1_1:39645237-39645256 Msa0021870:intron 25.0%
! TCTTCACTTAGAATATTCTT+AGG + chr1_1:39645422-39645441 None:intergenic 25.0%
! GAATATTCTAAGTGAAGAAT+TGG - chr1_1:39645424-39645443 Msa0021870:intron 25.0%
!!! ATATTTTTGGAAGAGAACTA+CGG + chr1_1:39645539-39645558 None:intergenic 25.0%
! AATTAGTTATTTGCAAAGTG+TGG - chr1_1:39645655-39645674 Msa0021870:intron 25.0%
! AGTGAAAAAGGAAAATTCAA+TGG - chr1_1:39645717-39645736 Msa0021870:intron 25.0%
! GTGAAAAAGGAAAATTCAAT+GGG - chr1_1:39645718-39645737 Msa0021870:intron 25.0%
!!! GAAGTTTGTTCATATTTTCT+TGG - chr1_1:39645779-39645798 Msa0021870:intron 25.0%
! CTTATGAAACAATGAACAAA+GGG - chr1_1:39646126-39646145 Msa0021870:intron 25.0%
! GCATTGAATAGTAAGAAAAA+AGG - chr1_1:39646162-39646181 Msa0021870:intron 25.0%
! TTGAATAGTAAGAAAAAAGG+TGG - chr1_1:39646165-39646184 Msa0021870:intron 25.0%
! TGGTAAAAAACAACAAAAAG+TGG - chr1_1:39646211-39646230 Msa0021870:intron 25.0%
!!! TGTTTTGAATGTGTGATAAT+TGG + chr1_1:39646447-39646466 None:intergenic 25.0%
!!! AATAATTTTGGGGTATCATT+TGG + chr1_1:39646493-39646512 None:intergenic 25.0%
!!! TGGTTTGTTGAATAATTTTG+GGG + chr1_1:39646503-39646522 None:intergenic 25.0%
!!! GTGGTTTGTTGAATAATTTT+GGG + chr1_1:39646504-39646523 None:intergenic 25.0%
!!! TGTGGTTTGTTGAATAATTT+TGG + chr1_1:39646505-39646524 None:intergenic 25.0%
! CAAAGCAAAAAATAATTCTC+CGG - chr1_1:39646760-39646779 Msa0021870:CDS 25.0%
!!! TTGCTATTTTCGTTTTTTAG+TGG + chr1_1:39646934-39646953 None:intergenic 25.0%
!!! ATTGATTTCTAAAACGTGAA+AGG + chr1_1:39647286-39647305 None:intergenic 25.0%
! TAATTCTTTCTTCTTCGAAT+CGG + chr1_1:39647334-39647353 None:intergenic 25.0%
!! ACTTTATTTGAAACAAATCC+TGG + chr1_1:39642655-39642674 None:intergenic 25.0%
!! CATCTTTTGTTACATTGTAT+AGG + chr1_1:39643080-39643099 None:intergenic 25.0%
! CTTTGAGTCCAAATTATAAA+GGG - chr1_1:39643112-39643131 Msa0021870:intron 25.0%
! TTTGAGTCCAAATTATAAAG+GGG - chr1_1:39643113-39643132 Msa0021870:intron 25.0%
! TCAAATATATAAACCTTGAC+CGG + chr1_1:39643261-39643280 None:intergenic 25.0%
! ACTAGAAGTAGAAAATAGTA+TGG + chr1_1:39643746-39643765 None:intergenic 25.0%
! TTACTCCCTTAAAATTACAA+AGG - chr1_1:39643805-39643824 Msa0021870:intron 25.0%
!!! ATTTTGGTTGTGTAAATGTT+AGG - chr1_1:39643957-39643976 Msa0021870:intron 25.0%
! TGTAATTCAAACCCAAAATA+TGG - chr1_1:39643994-39644013 Msa0021870:intron 25.0%
!! AATAAAAACAAATTCTGAGG+TGG + chr1_1:39644257-39644276 None:intergenic 25.0%
! AGATATCCAACAAAAATATG+GGG + chr1_1:39644371-39644390 None:intergenic 25.0%
! TTCATTAGAGGAATTGTTAA+TGG - chr1_1:39644587-39644606 Msa0021870:intron 25.0%
! TTATAGTGCATGATTACTTA+GGG + chr1_1:39645036-39645055 None:intergenic 25.0%
! TTTATAGTGCATGATTACTT+AGG + chr1_1:39645037-39645056 None:intergenic 25.0%
!!! ATTGTTTTATCTTGGTTTTC+GGG - chr1_1:39645173-39645192 Msa0021870:intron 25.0%
!!! GGTGATATCTTATTTTTTCT+TGG - chr1_1:39645231-39645250 Msa0021870:intron 25.0%
!!! TATCTTATTTTTTCTTGGGA+AGG - chr1_1:39645236-39645255 Msa0021870:intron 25.0%
!!! ATCTTATTTTTTCTTGGGAA+GGG - chr1_1:39645237-39645256 Msa0021870:intron 25.0%
! TCTTCACTTAGAATATTCTT+AGG + chr1_1:39645422-39645441 None:intergenic 25.0%
! GAATATTCTAAGTGAAGAAT+TGG - chr1_1:39645424-39645443 Msa0021870:intron 25.0%
!!! ATATTTTTGGAAGAGAACTA+CGG + chr1_1:39645539-39645558 None:intergenic 25.0%
! AATTAGTTATTTGCAAAGTG+TGG - chr1_1:39645655-39645674 Msa0021870:intron 25.0%
! AGTGAAAAAGGAAAATTCAA+TGG - chr1_1:39645717-39645736 Msa0021870:intron 25.0%
! GTGAAAAAGGAAAATTCAAT+GGG - chr1_1:39645718-39645737 Msa0021870:intron 25.0%
!!! GAAGTTTGTTCATATTTTCT+TGG - chr1_1:39645779-39645798 Msa0021870:intron 25.0%
! CTTATGAAACAATGAACAAA+GGG - chr1_1:39646126-39646145 Msa0021870:intron 25.0%
! GCATTGAATAGTAAGAAAAA+AGG - chr1_1:39646162-39646181 Msa0021870:intron 25.0%
! TTGAATAGTAAGAAAAAAGG+TGG - chr1_1:39646165-39646184 Msa0021870:intron 25.0%
! TGGTAAAAAACAACAAAAAG+TGG - chr1_1:39646211-39646230 Msa0021870:intron 25.0%
!!! TGTTTTGAATGTGTGATAAT+TGG + chr1_1:39646447-39646466 None:intergenic 25.0%
!!! AATAATTTTGGGGTATCATT+TGG + chr1_1:39646493-39646512 None:intergenic 25.0%
!!! TGGTTTGTTGAATAATTTTG+GGG + chr1_1:39646503-39646522 None:intergenic 25.0%
!!! GTGGTTTGTTGAATAATTTT+GGG + chr1_1:39646504-39646523 None:intergenic 25.0%
!!! TGTGGTTTGTTGAATAATTT+TGG + chr1_1:39646505-39646524 None:intergenic 25.0%
! CAAAGCAAAAAATAATTCTC+CGG - chr1_1:39646760-39646779 Msa0021870:CDS 25.0%
!!! TTGCTATTTTCGTTTTTTAG+TGG + chr1_1:39646934-39646953 None:intergenic 25.0%
!!! ATTGATTTCTAAAACGTGAA+AGG + chr1_1:39647286-39647305 None:intergenic 25.0%
! TAATTCTTTCTTCTTCGAAT+CGG + chr1_1:39647334-39647353 None:intergenic 25.0%
!! ACTTTATTTGAAACAAATCC+TGG + chr1_1:39642655-39642674 None:intergenic 25.0%
!! CATCTTTTGTTACATTGTAT+AGG + chr1_1:39643080-39643099 None:intergenic 25.0%
! CTTTGAGTCCAAATTATAAA+GGG - chr1_1:39643112-39643131 Msa0021870:intron 25.0%
! TTTGAGTCCAAATTATAAAG+GGG - chr1_1:39643113-39643132 Msa0021870:intron 25.0%
! TCAAATATATAAACCTTGAC+CGG + chr1_1:39643261-39643280 None:intergenic 25.0%
! ACTAGAAGTAGAAAATAGTA+TGG + chr1_1:39643746-39643765 None:intergenic 25.0%
! TTACTCCCTTAAAATTACAA+AGG - chr1_1:39643805-39643824 Msa0021870:intron 25.0%
!!! ATTTTGGTTGTGTAAATGTT+AGG - chr1_1:39643957-39643976 Msa0021870:intron 25.0%
! TGTAATTCAAACCCAAAATA+TGG - chr1_1:39643994-39644013 Msa0021870:intron 25.0%
!! AATAAAAACAAATTCTGAGG+TGG + chr1_1:39644257-39644276 None:intergenic 25.0%
! AGATATCCAACAAAAATATG+GGG + chr1_1:39644371-39644390 None:intergenic 25.0%
! TTCATTAGAGGAATTGTTAA+TGG - chr1_1:39644587-39644606 Msa0021870:intron 25.0%
! TTATAGTGCATGATTACTTA+GGG + chr1_1:39645036-39645055 None:intergenic 25.0%
! TTTATAGTGCATGATTACTT+AGG + chr1_1:39645037-39645056 None:intergenic 25.0%
!!! ATTGTTTTATCTTGGTTTTC+GGG - chr1_1:39645173-39645192 Msa0021870:intron 25.0%
!!! GGTGATATCTTATTTTTTCT+TGG - chr1_1:39645231-39645250 Msa0021870:intron 25.0%
!!! TATCTTATTTTTTCTTGGGA+AGG - chr1_1:39645236-39645255 Msa0021870:intron 25.0%
!!! ATCTTATTTTTTCTTGGGAA+GGG - chr1_1:39645237-39645256 Msa0021870:intron 25.0%
! TCTTCACTTAGAATATTCTT+AGG + chr1_1:39645422-39645441 None:intergenic 25.0%
! GAATATTCTAAGTGAAGAAT+TGG - chr1_1:39645424-39645443 Msa0021870:intron 25.0%
!!! ATATTTTTGGAAGAGAACTA+CGG + chr1_1:39645539-39645558 None:intergenic 25.0%
! AATTAGTTATTTGCAAAGTG+TGG - chr1_1:39645655-39645674 Msa0021870:intron 25.0%
! AGTGAAAAAGGAAAATTCAA+TGG - chr1_1:39645717-39645736 Msa0021870:intron 25.0%
! GTGAAAAAGGAAAATTCAAT+GGG - chr1_1:39645718-39645737 Msa0021870:intron 25.0%
!!! GAAGTTTGTTCATATTTTCT+TGG - chr1_1:39645779-39645798 Msa0021870:intron 25.0%
! CTTATGAAACAATGAACAAA+GGG - chr1_1:39646126-39646145 Msa0021870:intron 25.0%
! GCATTGAATAGTAAGAAAAA+AGG - chr1_1:39646162-39646181 Msa0021870:intron 25.0%
! TTGAATAGTAAGAAAAAAGG+TGG - chr1_1:39646165-39646184 Msa0021870:intron 25.0%
! TGGTAAAAAACAACAAAAAG+TGG - chr1_1:39646211-39646230 Msa0021870:intron 25.0%
!!! TGTTTTGAATGTGTGATAAT+TGG + chr1_1:39646447-39646466 None:intergenic 25.0%
!!! AATAATTTTGGGGTATCATT+TGG + chr1_1:39646493-39646512 None:intergenic 25.0%
!!! TGGTTTGTTGAATAATTTTG+GGG + chr1_1:39646503-39646522 None:intergenic 25.0%
!!! GTGGTTTGTTGAATAATTTT+GGG + chr1_1:39646504-39646523 None:intergenic 25.0%
!!! TGTGGTTTGTTGAATAATTT+TGG + chr1_1:39646505-39646524 None:intergenic 25.0%
! CAAAGCAAAAAATAATTCTC+CGG - chr1_1:39646760-39646779 Msa0021870:CDS 25.0%
!!! TTGCTATTTTCGTTTTTTAG+TGG + chr1_1:39646934-39646953 None:intergenic 25.0%
!!! ATTGATTTCTAAAACGTGAA+AGG + chr1_1:39647286-39647305 None:intergenic 25.0%
! TAATTCTTTCTTCTTCGAAT+CGG + chr1_1:39647334-39647353 None:intergenic 25.0%
AATGGTGTAGATAAGTTTGA+TGG + chr1_1:39642768-39642787 None:intergenic 30.0%
ATCAAACTTATCTACACCAT+TGG - chr1_1:39642767-39642786 Msa0021870:CDS 30.0%
TCAAACTTATCTACACCATT+GGG - chr1_1:39642768-39642787 Msa0021870:CDS 30.0%
!!! CTATTTGGTGTCACATTTTT+AGG + chr1_1:39642814-39642833 None:intergenic 30.0%
! ATAATACCTGATTGGCTATT+TGG + chr1_1:39642829-39642848 None:intergenic 30.0%
! TTTTGCCAAGAGGATATTTT+AGG - chr1_1:39642868-39642887 Msa0021870:intron 30.0%
!!! GATATTTTAGGACAGTACTA+TGG - chr1_1:39642880-39642899 Msa0021870:intron 30.0%
TACCAACTTCTATACCATAA+GGG + chr1_1:39642948-39642967 None:intergenic 30.0%
TTACCAACTTCTATACCATA+AGG + chr1_1:39642949-39642968 None:intergenic 30.0%
! GCTTTGAGTCCAAATTATAA+AGG - chr1_1:39643111-39643130 Msa0021870:intron 30.0%
TTGAGTCCAAATTATAAAGG+GGG - chr1_1:39643114-39643133 Msa0021870:intron 30.0%
! AAGATGAGGAAAGGATTTTT+AGG - chr1_1:39643168-39643187 Msa0021870:intron 30.0%
ATACTGTTATGTGGATCAAT+TGG - chr1_1:39643217-39643236 Msa0021870:intron 30.0%
TACTGTTATGTGGATCAATT+GGG - chr1_1:39643218-39643237 Msa0021870:intron 30.0%
CAATTGGGATGTTAACTTTA+TGG - chr1_1:39643233-39643252 Msa0021870:intron 30.0%
!! GACTGATACTTTGAAGTTAT+CGG - chr1_1:39643284-39643303 Msa0021870:intron 30.0%
AAGTTATCGGATAAGTCTAA+AGG - chr1_1:39643297-39643316 Msa0021870:intron 30.0%
AAAAGTAATGTGAGTGATAG+CGG - chr1_1:39643576-39643595 Msa0021870:intron 30.0%
GTTCATAGTGCATATATACA+TGG - chr1_1:39643769-39643788 Msa0021870:intron 30.0%
TCAAACCCAAAATATGGAAA+TGG - chr1_1:39644000-39644019 Msa0021870:intron 30.0%
! CCTTTCCATTTCCATATTTT+GGG + chr1_1:39644008-39644027 None:intergenic 30.0%
! TCCTTTCCATTTCCATATTT+TGG + chr1_1:39644009-39644028 None:intergenic 30.0%
AATGAGAAAGGATATGTTGT+AGG - chr1_1:39644036-39644055 Msa0021870:intron 30.0%
!!! AATGGGGCTTTTTTATTTCT+TGG - chr1_1:39644161-39644180 Msa0021870:intron 30.0%
!! ATTAAAATATGGTGCTGCAA+TGG - chr1_1:39644334-39644353 Msa0021870:intron 30.0%
!! AGTATACCCCATATTTTTGT+TGG - chr1_1:39644362-39644381 Msa0021870:intron 30.0%
TATAGATGTTTGGTACTTCT+CGG - chr1_1:39644468-39644487 Msa0021870:intron 30.0%
GTGTATTTCTTTGCATTTGA+AGG - chr1_1:39644553-39644572 Msa0021870:intron 30.0%
GCAAAATAGAAGTTCATTAG+AGG - chr1_1:39644575-39644594 Msa0021870:intron 30.0%
CTTATGGAGTTGAATGATTT+AGG + chr1_1:39644666-39644685 None:intergenic 30.0%
!! CTTGTTTTCCAAGTTGTTTT+TGG - chr1_1:39644982-39645001 Msa0021870:intron 30.0%
! ATTTTCCACCAAAAACAACT+TGG + chr1_1:39644993-39645012 None:intergenic 30.0%
TATAGTGCATGATTACTTAG+GGG + chr1_1:39645035-39645054 None:intergenic 30.0%
! ATGAATAAAAGAGTGTGCAA+TGG + chr1_1:39645066-39645085 None:intergenic 30.0%
!!! TCTAGGGTATTGTTTTATCT+TGG - chr1_1:39645165-39645184 Msa0021870:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG + chr1_1:39645223-39645242 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr1_1:39645331-39645350 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr1_1:39645332-39645351 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr1_1:39645332-39645351 Msa0021870:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG + chr1_1:39645350-39645369 None:intergenic 30.0%
TATTCTAAGTGAAGAATTGG+AGG - chr1_1:39645427-39645446 Msa0021870:intron 30.0%
ATTCTAAGTGAAGAATTGGA+GGG - chr1_1:39645428-39645447 Msa0021870:intron 30.0%
AGGATTGTATGTTTAGATGA+AGG + chr1_1:39645837-39645856 None:intergenic 30.0%
GCATGTTTAGATGAATGTTT+AGG + chr1_1:39645857-39645876 None:intergenic 30.0%
! TTCTAGCTATATACCTAAAG+TGG - chr1_1:39645880-39645899 Msa0021870:CDS 30.0%
GCTTATGAAACAATGAACAA+AGG - chr1_1:39646125-39646144 Msa0021870:intron 30.0%
! AACAAAGGGTTAGTAGTAAT+AGG - chr1_1:39646140-39646159 Msa0021870:intron 30.0%
GAAAATAAAGCATATCACTG+TGG - chr1_1:39646191-39646210 Msa0021870:intron 30.0%
!! TCACATTTTGGCATTTTCAA+AGG - chr1_1:39646292-39646311 Msa0021870:intron 30.0%
!! CACATTTTGGCATTTTCAAA+GGG - chr1_1:39646293-39646312 Msa0021870:intron 30.0%
AATTATAAGCCAAGGAATCA+TGG - chr1_1:39646353-39646372 Msa0021870:CDS 30.0%
AATTTCATACCATGATTCCT+TGG + chr1_1:39646365-39646384 None:intergenic 30.0%
!!! CGGAGAATTATTTTTTGCTT+TGG + chr1_1:39646762-39646781 None:intergenic 30.0%
CAAGATTGATCAAGAAATAC+CGG + chr1_1:39646782-39646801 None:intergenic 30.0%
ACGAAAATAGCAAACAGTTA+AGG - chr1_1:39646941-39646960 Msa0021870:CDS 30.0%
GATTCGAAGAAGAAAGAATT+AGG - chr1_1:39647333-39647352 Msa0021870:CDS 30.0%
AATGGTGTAGATAAGTTTGA+TGG + chr1_1:39642768-39642787 None:intergenic 30.0%
ATCAAACTTATCTACACCAT+TGG - chr1_1:39642767-39642786 Msa0021870:CDS 30.0%
TCAAACTTATCTACACCATT+GGG - chr1_1:39642768-39642787 Msa0021870:CDS 30.0%
!!! CTATTTGGTGTCACATTTTT+AGG + chr1_1:39642814-39642833 None:intergenic 30.0%
! ATAATACCTGATTGGCTATT+TGG + chr1_1:39642829-39642848 None:intergenic 30.0%
! TTTTGCCAAGAGGATATTTT+AGG - chr1_1:39642868-39642887 Msa0021870:intron 30.0%
!!! GATATTTTAGGACAGTACTA+TGG - chr1_1:39642880-39642899 Msa0021870:intron 30.0%
TACCAACTTCTATACCATAA+GGG + chr1_1:39642948-39642967 None:intergenic 30.0%
TTACCAACTTCTATACCATA+AGG + chr1_1:39642949-39642968 None:intergenic 30.0%
! GCTTTGAGTCCAAATTATAA+AGG - chr1_1:39643111-39643130 Msa0021870:intron 30.0%
TTGAGTCCAAATTATAAAGG+GGG - chr1_1:39643114-39643133 Msa0021870:intron 30.0%
! AAGATGAGGAAAGGATTTTT+AGG - chr1_1:39643168-39643187 Msa0021870:intron 30.0%
ATACTGTTATGTGGATCAAT+TGG - chr1_1:39643217-39643236 Msa0021870:intron 30.0%
TACTGTTATGTGGATCAATT+GGG - chr1_1:39643218-39643237 Msa0021870:intron 30.0%
CAATTGGGATGTTAACTTTA+TGG - chr1_1:39643233-39643252 Msa0021870:intron 30.0%
!! GACTGATACTTTGAAGTTAT+CGG - chr1_1:39643284-39643303 Msa0021870:intron 30.0%
AAGTTATCGGATAAGTCTAA+AGG - chr1_1:39643297-39643316 Msa0021870:intron 30.0%
AAAAGTAATGTGAGTGATAG+CGG - chr1_1:39643576-39643595 Msa0021870:intron 30.0%
GTTCATAGTGCATATATACA+TGG - chr1_1:39643769-39643788 Msa0021870:intron 30.0%
TCAAACCCAAAATATGGAAA+TGG - chr1_1:39644000-39644019 Msa0021870:intron 30.0%
! CCTTTCCATTTCCATATTTT+GGG + chr1_1:39644008-39644027 None:intergenic 30.0%
! TCCTTTCCATTTCCATATTT+TGG + chr1_1:39644009-39644028 None:intergenic 30.0%
AATGAGAAAGGATATGTTGT+AGG - chr1_1:39644036-39644055 Msa0021870:intron 30.0%
!!! AATGGGGCTTTTTTATTTCT+TGG - chr1_1:39644161-39644180 Msa0021870:intron 30.0%
!! ATTAAAATATGGTGCTGCAA+TGG - chr1_1:39644334-39644353 Msa0021870:intron 30.0%
!! AGTATACCCCATATTTTTGT+TGG - chr1_1:39644362-39644381 Msa0021870:intron 30.0%
TATAGATGTTTGGTACTTCT+CGG - chr1_1:39644468-39644487 Msa0021870:intron 30.0%
GTGTATTTCTTTGCATTTGA+AGG - chr1_1:39644553-39644572 Msa0021870:intron 30.0%
GCAAAATAGAAGTTCATTAG+AGG - chr1_1:39644575-39644594 Msa0021870:intron 30.0%
CTTATGGAGTTGAATGATTT+AGG + chr1_1:39644666-39644685 None:intergenic 30.0%
!! CTTGTTTTCCAAGTTGTTTT+TGG - chr1_1:39644982-39645001 Msa0021870:intron 30.0%
! ATTTTCCACCAAAAACAACT+TGG + chr1_1:39644993-39645012 None:intergenic 30.0%
TATAGTGCATGATTACTTAG+GGG + chr1_1:39645035-39645054 None:intergenic 30.0%
! ATGAATAAAAGAGTGTGCAA+TGG + chr1_1:39645066-39645085 None:intergenic 30.0%
!!! TCTAGGGTATTGTTTTATCT+TGG - chr1_1:39645165-39645184 Msa0021870:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG + chr1_1:39645223-39645242 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr1_1:39645331-39645350 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr1_1:39645332-39645351 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr1_1:39645332-39645351 Msa0021870:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG + chr1_1:39645350-39645369 None:intergenic 30.0%
TATTCTAAGTGAAGAATTGG+AGG - chr1_1:39645427-39645446 Msa0021870:intron 30.0%
ATTCTAAGTGAAGAATTGGA+GGG - chr1_1:39645428-39645447 Msa0021870:intron 30.0%
AGGATTGTATGTTTAGATGA+AGG + chr1_1:39645837-39645856 None:intergenic 30.0%
GCATGTTTAGATGAATGTTT+AGG + chr1_1:39645857-39645876 None:intergenic 30.0%
! TTCTAGCTATATACCTAAAG+TGG - chr1_1:39645880-39645899 Msa0021870:CDS 30.0%
GCTTATGAAACAATGAACAA+AGG - chr1_1:39646125-39646144 Msa0021870:intron 30.0%
! AACAAAGGGTTAGTAGTAAT+AGG - chr1_1:39646140-39646159 Msa0021870:intron 30.0%
GAAAATAAAGCATATCACTG+TGG - chr1_1:39646191-39646210 Msa0021870:intron 30.0%
!! TCACATTTTGGCATTTTCAA+AGG - chr1_1:39646292-39646311 Msa0021870:intron 30.0%
!! CACATTTTGGCATTTTCAAA+GGG - chr1_1:39646293-39646312 Msa0021870:intron 30.0%
AATTATAAGCCAAGGAATCA+TGG - chr1_1:39646353-39646372 Msa0021870:CDS 30.0%
AATTTCATACCATGATTCCT+TGG + chr1_1:39646365-39646384 None:intergenic 30.0%
!!! CGGAGAATTATTTTTTGCTT+TGG + chr1_1:39646762-39646781 None:intergenic 30.0%
CAAGATTGATCAAGAAATAC+CGG + chr1_1:39646782-39646801 None:intergenic 30.0%
ACGAAAATAGCAAACAGTTA+AGG - chr1_1:39646941-39646960 Msa0021870:CDS 30.0%
GATTCGAAGAAGAAAGAATT+AGG - chr1_1:39647333-39647352 Msa0021870:CDS 30.0%
AATGGTGTAGATAAGTTTGA+TGG + chr1_1:39642768-39642787 None:intergenic 30.0%
ATCAAACTTATCTACACCAT+TGG - chr1_1:39642767-39642786 Msa0021870:CDS 30.0%
TCAAACTTATCTACACCATT+GGG - chr1_1:39642768-39642787 Msa0021870:CDS 30.0%
!!! CTATTTGGTGTCACATTTTT+AGG + chr1_1:39642814-39642833 None:intergenic 30.0%
! ATAATACCTGATTGGCTATT+TGG + chr1_1:39642829-39642848 None:intergenic 30.0%
! TTTTGCCAAGAGGATATTTT+AGG - chr1_1:39642868-39642887 Msa0021870:intron 30.0%
!!! GATATTTTAGGACAGTACTA+TGG - chr1_1:39642880-39642899 Msa0021870:intron 30.0%
TACCAACTTCTATACCATAA+GGG + chr1_1:39642948-39642967 None:intergenic 30.0%
TTACCAACTTCTATACCATA+AGG + chr1_1:39642949-39642968 None:intergenic 30.0%
! GCTTTGAGTCCAAATTATAA+AGG - chr1_1:39643111-39643130 Msa0021870:intron 30.0%
TTGAGTCCAAATTATAAAGG+GGG - chr1_1:39643114-39643133 Msa0021870:intron 30.0%
! AAGATGAGGAAAGGATTTTT+AGG - chr1_1:39643168-39643187 Msa0021870:intron 30.0%
ATACTGTTATGTGGATCAAT+TGG - chr1_1:39643217-39643236 Msa0021870:intron 30.0%
TACTGTTATGTGGATCAATT+GGG - chr1_1:39643218-39643237 Msa0021870:intron 30.0%
CAATTGGGATGTTAACTTTA+TGG - chr1_1:39643233-39643252 Msa0021870:intron 30.0%
!! GACTGATACTTTGAAGTTAT+CGG - chr1_1:39643284-39643303 Msa0021870:intron 30.0%
AAGTTATCGGATAAGTCTAA+AGG - chr1_1:39643297-39643316 Msa0021870:intron 30.0%
AAAAGTAATGTGAGTGATAG+CGG - chr1_1:39643576-39643595 Msa0021870:intron 30.0%
GTTCATAGTGCATATATACA+TGG - chr1_1:39643769-39643788 Msa0021870:intron 30.0%
TCAAACCCAAAATATGGAAA+TGG - chr1_1:39644000-39644019 Msa0021870:intron 30.0%
! CCTTTCCATTTCCATATTTT+GGG + chr1_1:39644008-39644027 None:intergenic 30.0%
! TCCTTTCCATTTCCATATTT+TGG + chr1_1:39644009-39644028 None:intergenic 30.0%
AATGAGAAAGGATATGTTGT+AGG - chr1_1:39644036-39644055 Msa0021870:intron 30.0%
!!! AATGGGGCTTTTTTATTTCT+TGG - chr1_1:39644161-39644180 Msa0021870:intron 30.0%
!! ATTAAAATATGGTGCTGCAA+TGG - chr1_1:39644334-39644353 Msa0021870:intron 30.0%
!! AGTATACCCCATATTTTTGT+TGG - chr1_1:39644362-39644381 Msa0021870:intron 30.0%
TATAGATGTTTGGTACTTCT+CGG - chr1_1:39644468-39644487 Msa0021870:intron 30.0%
GTGTATTTCTTTGCATTTGA+AGG - chr1_1:39644553-39644572 Msa0021870:intron 30.0%
GCAAAATAGAAGTTCATTAG+AGG - chr1_1:39644575-39644594 Msa0021870:intron 30.0%
CTTATGGAGTTGAATGATTT+AGG + chr1_1:39644666-39644685 None:intergenic 30.0%
!! CTTGTTTTCCAAGTTGTTTT+TGG - chr1_1:39644982-39645001 Msa0021870:intron 30.0%
! ATTTTCCACCAAAAACAACT+TGG + chr1_1:39644993-39645012 None:intergenic 30.0%
TATAGTGCATGATTACTTAG+GGG + chr1_1:39645035-39645054 None:intergenic 30.0%
! ATGAATAAAAGAGTGTGCAA+TGG + chr1_1:39645066-39645085 None:intergenic 30.0%
!!! TCTAGGGTATTGTTTTATCT+TGG - chr1_1:39645165-39645184 Msa0021870:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG + chr1_1:39645223-39645242 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr1_1:39645331-39645350 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr1_1:39645332-39645351 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr1_1:39645332-39645351 Msa0021870:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG + chr1_1:39645350-39645369 None:intergenic 30.0%
TATTCTAAGTGAAGAATTGG+AGG - chr1_1:39645427-39645446 Msa0021870:intron 30.0%
ATTCTAAGTGAAGAATTGGA+GGG - chr1_1:39645428-39645447 Msa0021870:intron 30.0%
AGGATTGTATGTTTAGATGA+AGG + chr1_1:39645837-39645856 None:intergenic 30.0%
GCATGTTTAGATGAATGTTT+AGG + chr1_1:39645857-39645876 None:intergenic 30.0%
! TTCTAGCTATATACCTAAAG+TGG - chr1_1:39645880-39645899 Msa0021870:CDS 30.0%
GCTTATGAAACAATGAACAA+AGG - chr1_1:39646125-39646144 Msa0021870:intron 30.0%
! AACAAAGGGTTAGTAGTAAT+AGG - chr1_1:39646140-39646159 Msa0021870:intron 30.0%
GAAAATAAAGCATATCACTG+TGG - chr1_1:39646191-39646210 Msa0021870:intron 30.0%
!! TCACATTTTGGCATTTTCAA+AGG - chr1_1:39646292-39646311 Msa0021870:intron 30.0%
!! CACATTTTGGCATTTTCAAA+GGG - chr1_1:39646293-39646312 Msa0021870:intron 30.0%
AATTATAAGCCAAGGAATCA+TGG - chr1_1:39646353-39646372 Msa0021870:CDS 30.0%
AATTTCATACCATGATTCCT+TGG + chr1_1:39646365-39646384 None:intergenic 30.0%
!!! CGGAGAATTATTTTTTGCTT+TGG + chr1_1:39646762-39646781 None:intergenic 30.0%
CAAGATTGATCAAGAAATAC+CGG + chr1_1:39646782-39646801 None:intergenic 30.0%
ACGAAAATAGCAAACAGTTA+AGG - chr1_1:39646941-39646960 Msa0021870:CDS 30.0%
GATTCGAAGAAGAAAGAATT+AGG - chr1_1:39647333-39647352 Msa0021870:CDS 30.0%
AATGGTGTAGATAAGTTTGA+TGG + chr1_1:39642768-39642787 None:intergenic 30.0%
ATCAAACTTATCTACACCAT+TGG - chr1_1:39642767-39642786 Msa0021870:CDS 30.0%
TCAAACTTATCTACACCATT+GGG - chr1_1:39642768-39642787 Msa0021870:CDS 30.0%
!!! CTATTTGGTGTCACATTTTT+AGG + chr1_1:39642814-39642833 None:intergenic 30.0%
! ATAATACCTGATTGGCTATT+TGG + chr1_1:39642829-39642848 None:intergenic 30.0%
! TTTTGCCAAGAGGATATTTT+AGG - chr1_1:39642868-39642887 Msa0021870:intron 30.0%
!!! GATATTTTAGGACAGTACTA+TGG - chr1_1:39642880-39642899 Msa0021870:intron 30.0%
TACCAACTTCTATACCATAA+GGG + chr1_1:39642948-39642967 None:intergenic 30.0%
TTACCAACTTCTATACCATA+AGG + chr1_1:39642949-39642968 None:intergenic 30.0%
! GCTTTGAGTCCAAATTATAA+AGG - chr1_1:39643111-39643130 Msa0021870:intron 30.0%
TTGAGTCCAAATTATAAAGG+GGG - chr1_1:39643114-39643133 Msa0021870:intron 30.0%
! AAGATGAGGAAAGGATTTTT+AGG - chr1_1:39643168-39643187 Msa0021870:intron 30.0%
ATACTGTTATGTGGATCAAT+TGG - chr1_1:39643217-39643236 Msa0021870:intron 30.0%
TACTGTTATGTGGATCAATT+GGG - chr1_1:39643218-39643237 Msa0021870:intron 30.0%
CAATTGGGATGTTAACTTTA+TGG - chr1_1:39643233-39643252 Msa0021870:intron 30.0%
!! GACTGATACTTTGAAGTTAT+CGG - chr1_1:39643284-39643303 Msa0021870:intron 30.0%
AAGTTATCGGATAAGTCTAA+AGG - chr1_1:39643297-39643316 Msa0021870:intron 30.0%
AAAAGTAATGTGAGTGATAG+CGG - chr1_1:39643576-39643595 Msa0021870:intron 30.0%
GTTCATAGTGCATATATACA+TGG - chr1_1:39643769-39643788 Msa0021870:intron 30.0%
TCAAACCCAAAATATGGAAA+TGG - chr1_1:39644000-39644019 Msa0021870:intron 30.0%
! CCTTTCCATTTCCATATTTT+GGG + chr1_1:39644008-39644027 None:intergenic 30.0%
! TCCTTTCCATTTCCATATTT+TGG + chr1_1:39644009-39644028 None:intergenic 30.0%
AATGAGAAAGGATATGTTGT+AGG - chr1_1:39644036-39644055 Msa0021870:intron 30.0%
!!! AATGGGGCTTTTTTATTTCT+TGG - chr1_1:39644161-39644180 Msa0021870:intron 30.0%
!! ATTAAAATATGGTGCTGCAA+TGG - chr1_1:39644334-39644353 Msa0021870:intron 30.0%
!! AGTATACCCCATATTTTTGT+TGG - chr1_1:39644362-39644381 Msa0021870:intron 30.0%
TATAGATGTTTGGTACTTCT+CGG - chr1_1:39644468-39644487 Msa0021870:intron 30.0%
GTGTATTTCTTTGCATTTGA+AGG - chr1_1:39644553-39644572 Msa0021870:intron 30.0%
GCAAAATAGAAGTTCATTAG+AGG - chr1_1:39644575-39644594 Msa0021870:intron 30.0%
CTTATGGAGTTGAATGATTT+AGG + chr1_1:39644666-39644685 None:intergenic 30.0%
!! CTTGTTTTCCAAGTTGTTTT+TGG - chr1_1:39644982-39645001 Msa0021870:intron 30.0%
! ATTTTCCACCAAAAACAACT+TGG + chr1_1:39644993-39645012 None:intergenic 30.0%
TATAGTGCATGATTACTTAG+GGG + chr1_1:39645035-39645054 None:intergenic 30.0%
! ATGAATAAAAGAGTGTGCAA+TGG + chr1_1:39645066-39645085 None:intergenic 30.0%
!!! TCTAGGGTATTGTTTTATCT+TGG - chr1_1:39645165-39645184 Msa0021870:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG + chr1_1:39645223-39645242 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr1_1:39645331-39645350 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr1_1:39645332-39645351 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr1_1:39645332-39645351 Msa0021870:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG + chr1_1:39645350-39645369 None:intergenic 30.0%
TATTCTAAGTGAAGAATTGG+AGG - chr1_1:39645427-39645446 Msa0021870:intron 30.0%
ATTCTAAGTGAAGAATTGGA+GGG - chr1_1:39645428-39645447 Msa0021870:intron 30.0%
AGGATTGTATGTTTAGATGA+AGG + chr1_1:39645837-39645856 None:intergenic 30.0%
GCATGTTTAGATGAATGTTT+AGG + chr1_1:39645857-39645876 None:intergenic 30.0%
! TTCTAGCTATATACCTAAAG+TGG - chr1_1:39645880-39645899 Msa0021870:CDS 30.0%
GCTTATGAAACAATGAACAA+AGG - chr1_1:39646125-39646144 Msa0021870:intron 30.0%
! AACAAAGGGTTAGTAGTAAT+AGG - chr1_1:39646140-39646159 Msa0021870:intron 30.0%
GAAAATAAAGCATATCACTG+TGG - chr1_1:39646191-39646210 Msa0021870:intron 30.0%
!! TCACATTTTGGCATTTTCAA+AGG - chr1_1:39646292-39646311 Msa0021870:intron 30.0%
!! CACATTTTGGCATTTTCAAA+GGG - chr1_1:39646293-39646312 Msa0021870:intron 30.0%
AATTATAAGCCAAGGAATCA+TGG - chr1_1:39646353-39646372 Msa0021870:CDS 30.0%
AATTTCATACCATGATTCCT+TGG + chr1_1:39646365-39646384 None:intergenic 30.0%
!!! CGGAGAATTATTTTTTGCTT+TGG + chr1_1:39646762-39646781 None:intergenic 30.0%
CAAGATTGATCAAGAAATAC+CGG + chr1_1:39646782-39646801 None:intergenic 30.0%
ACGAAAATAGCAAACAGTTA+AGG - chr1_1:39646941-39646960 Msa0021870:CDS 30.0%
GATTCGAAGAAGAAAGAATT+AGG - chr1_1:39647333-39647352 Msa0021870:CDS 30.0%
AATGGTGTAGATAAGTTTGA+TGG + chr1_1:39642768-39642787 None:intergenic 30.0%
ATCAAACTTATCTACACCAT+TGG - chr1_1:39642767-39642786 Msa0021870:CDS 30.0%
TCAAACTTATCTACACCATT+GGG - chr1_1:39642768-39642787 Msa0021870:CDS 30.0%
!!! CTATTTGGTGTCACATTTTT+AGG + chr1_1:39642814-39642833 None:intergenic 30.0%
! ATAATACCTGATTGGCTATT+TGG + chr1_1:39642829-39642848 None:intergenic 30.0%
! TTTTGCCAAGAGGATATTTT+AGG - chr1_1:39642868-39642887 Msa0021870:intron 30.0%
!!! GATATTTTAGGACAGTACTA+TGG - chr1_1:39642880-39642899 Msa0021870:intron 30.0%
TACCAACTTCTATACCATAA+GGG + chr1_1:39642948-39642967 None:intergenic 30.0%
TTACCAACTTCTATACCATA+AGG + chr1_1:39642949-39642968 None:intergenic 30.0%
! GCTTTGAGTCCAAATTATAA+AGG - chr1_1:39643111-39643130 Msa0021870:intron 30.0%
TTGAGTCCAAATTATAAAGG+GGG - chr1_1:39643114-39643133 Msa0021870:intron 30.0%
! AAGATGAGGAAAGGATTTTT+AGG - chr1_1:39643168-39643187 Msa0021870:intron 30.0%
ATACTGTTATGTGGATCAAT+TGG - chr1_1:39643217-39643236 Msa0021870:intron 30.0%
TACTGTTATGTGGATCAATT+GGG - chr1_1:39643218-39643237 Msa0021870:intron 30.0%
CAATTGGGATGTTAACTTTA+TGG - chr1_1:39643233-39643252 Msa0021870:intron 30.0%
!! GACTGATACTTTGAAGTTAT+CGG - chr1_1:39643284-39643303 Msa0021870:intron 30.0%
AAGTTATCGGATAAGTCTAA+AGG - chr1_1:39643297-39643316 Msa0021870:intron 30.0%
AAAAGTAATGTGAGTGATAG+CGG - chr1_1:39643576-39643595 Msa0021870:intron 30.0%
GTTCATAGTGCATATATACA+TGG - chr1_1:39643769-39643788 Msa0021870:intron 30.0%
TCAAACCCAAAATATGGAAA+TGG - chr1_1:39644000-39644019 Msa0021870:intron 30.0%
! CCTTTCCATTTCCATATTTT+GGG + chr1_1:39644008-39644027 None:intergenic 30.0%
! TCCTTTCCATTTCCATATTT+TGG + chr1_1:39644009-39644028 None:intergenic 30.0%
AATGAGAAAGGATATGTTGT+AGG - chr1_1:39644036-39644055 Msa0021870:intron 30.0%
!!! AATGGGGCTTTTTTATTTCT+TGG - chr1_1:39644161-39644180 Msa0021870:intron 30.0%
!! ATTAAAATATGGTGCTGCAA+TGG - chr1_1:39644334-39644353 Msa0021870:intron 30.0%
!! AGTATACCCCATATTTTTGT+TGG - chr1_1:39644362-39644381 Msa0021870:intron 30.0%
TATAGATGTTTGGTACTTCT+CGG - chr1_1:39644468-39644487 Msa0021870:intron 30.0%
GTGTATTTCTTTGCATTTGA+AGG - chr1_1:39644553-39644572 Msa0021870:intron 30.0%
GCAAAATAGAAGTTCATTAG+AGG - chr1_1:39644575-39644594 Msa0021870:intron 30.0%
CTTATGGAGTTGAATGATTT+AGG + chr1_1:39644666-39644685 None:intergenic 30.0%
!! CTTGTTTTCCAAGTTGTTTT+TGG - chr1_1:39644982-39645001 Msa0021870:intron 30.0%
! ATTTTCCACCAAAAACAACT+TGG + chr1_1:39644993-39645012 None:intergenic 30.0%
TATAGTGCATGATTACTTAG+GGG + chr1_1:39645035-39645054 None:intergenic 30.0%
! ATGAATAAAAGAGTGTGCAA+TGG + chr1_1:39645066-39645085 None:intergenic 30.0%
!!! TCTAGGGTATTGTTTTATCT+TGG - chr1_1:39645165-39645184 Msa0021870:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG + chr1_1:39645223-39645242 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr1_1:39645331-39645350 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr1_1:39645332-39645351 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr1_1:39645332-39645351 Msa0021870:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG + chr1_1:39645350-39645369 None:intergenic 30.0%
TATTCTAAGTGAAGAATTGG+AGG - chr1_1:39645427-39645446 Msa0021870:intron 30.0%
ATTCTAAGTGAAGAATTGGA+GGG - chr1_1:39645428-39645447 Msa0021870:intron 30.0%
AGGATTGTATGTTTAGATGA+AGG + chr1_1:39645837-39645856 None:intergenic 30.0%
GCATGTTTAGATGAATGTTT+AGG + chr1_1:39645857-39645876 None:intergenic 30.0%
! TTCTAGCTATATACCTAAAG+TGG - chr1_1:39645880-39645899 Msa0021870:CDS 30.0%
GCTTATGAAACAATGAACAA+AGG - chr1_1:39646125-39646144 Msa0021870:intron 30.0%
! AACAAAGGGTTAGTAGTAAT+AGG - chr1_1:39646140-39646159 Msa0021870:intron 30.0%
GAAAATAAAGCATATCACTG+TGG - chr1_1:39646191-39646210 Msa0021870:intron 30.0%
!! TCACATTTTGGCATTTTCAA+AGG - chr1_1:39646292-39646311 Msa0021870:intron 30.0%
!! CACATTTTGGCATTTTCAAA+GGG - chr1_1:39646293-39646312 Msa0021870:intron 30.0%
AATTATAAGCCAAGGAATCA+TGG - chr1_1:39646353-39646372 Msa0021870:CDS 30.0%
AATTTCATACCATGATTCCT+TGG + chr1_1:39646365-39646384 None:intergenic 30.0%
!!! CGGAGAATTATTTTTTGCTT+TGG + chr1_1:39646762-39646781 None:intergenic 30.0%
CAAGATTGATCAAGAAATAC+CGG + chr1_1:39646782-39646801 None:intergenic 30.0%
ACGAAAATAGCAAACAGTTA+AGG - chr1_1:39646941-39646960 Msa0021870:CDS 30.0%
GATTCGAAGAAGAAAGAATT+AGG - chr1_1:39647333-39647352 Msa0021870:CDS 30.0%
TGATGATTGTATCTCAGCAA+TGG - chr1_1:39642503-39642522 Msa0021870:CDS 35.0%
! CCTGGATTTAGTTCAATCTT+GGG + chr1_1:39642637-39642656 None:intergenic 35.0%
! TCCTGGATTTAGTTCAATCT+TGG + chr1_1:39642638-39642657 None:intergenic 35.0%
TATGATGTTGAGTTTCCAAG+AGG - chr1_1:39642679-39642698 Msa0021870:CDS 35.0%
TTGAGTGAAATATGACCTCT+TGG + chr1_1:39642697-39642716 None:intergenic 35.0%
TGTAGATAAGTTTGATGGAG+AGG + chr1_1:39642763-39642782 None:intergenic 35.0%
GGTATCTTATAACAACCCAA+TGG + chr1_1:39642786-39642805 None:intergenic 35.0%
!!! TTGGTGTCACATTTTTAGGT+TGG + chr1_1:39642810-39642829 None:intergenic 35.0%
! AAATAATGGCTTTTGCCAAG+AGG - chr1_1:39642858-39642877 Msa0021870:intron 35.0%
ACTGTCCTAAAATATCCTCT+TGG + chr1_1:39642876-39642895 None:intergenic 35.0%
ACATATATTCCAGACCCTTA+TGG - chr1_1:39642931-39642950 Msa0021870:CDS 35.0%
AATCCTGCTGAAATTCCAAA+AGG - chr1_1:39642967-39642986 Msa0021870:CDS 35.0%
ATCCTGCTGAAATTCCAAAA+GGG - chr1_1:39642968-39642987 Msa0021870:CDS 35.0%
! TGAAATTCCAAAAGGGTATG+TGG - chr1_1:39642975-39642994 Msa0021870:CDS 35.0%
TGCAAACCCCCTTTATAATT+TGG + chr1_1:39643123-39643142 None:intergenic 35.0%
!! ATCTTGCACTTGCTATTATC+AGG + chr1_1:39643153-39643172 None:intergenic 35.0%
ATAATAGCAAGTGCAAGATG+AGG - chr1_1:39643154-39643173 Msa0021870:intron 35.0%
GAGTATAAAGCATGATTGCA+AGG - chr1_1:39643323-39643342 Msa0021870:intron 35.0%
! CATAACCTCCATTTTGCATT+GGG + chr1_1:39643629-39643648 None:intergenic 35.0%
! ACATAACCTCCATTTTGCAT+TGG + chr1_1:39643630-39643649 None:intergenic 35.0%
AATGGAGGTTATGTCATCTA+TGG - chr1_1:39643636-39643655 Msa0021870:intron 35.0%
GCAATTGGATCAACTCTATA+TGG - chr1_1:39643681-39643700 Msa0021870:intron 35.0%
TGGTTGTGTAAATGTTAGGA+TGG - chr1_1:39643961-39643980 Msa0021870:intron 35.0%
GGTTGTGTAAATGTTAGGAT+GGG - chr1_1:39643962-39643981 Msa0021870:intron 35.0%
CCCAAAATATGGAAATGGAA+AGG - chr1_1:39644005-39644024 Msa0021870:intron 35.0%
TTAAGTATCTTGATAGAGCC+TGG + chr1_1:39644084-39644103 None:intergenic 35.0%
GGCTCTATCAAGATACTTAA+TGG - chr1_1:39644084-39644103 Msa0021870:intron 35.0%
TGGTGAAACTTTAACTCTAG+AGG - chr1_1:39644104-39644123 Msa0021870:intron 35.0%
GATAGGAATGTTAGACATGA+TGG + chr1_1:39644206-39644225 None:intergenic 35.0%
GAGGAATTGTTAATGGTTTG+AGG - chr1_1:39644594-39644613 Msa0021870:intron 35.0%
CAAAACAATACATCACGTGA+AGG - chr1_1:39644724-39644743 Msa0021870:intron 35.0%
AATACATCACGTGAAGGATT+GGG - chr1_1:39644730-39644749 Msa0021870:intron 35.0%
AGTTACAATGCATTGCAAGA+CGG - chr1_1:39644825-39644844 Msa0021870:intron 35.0%
ACGGAAGAATGCTTGAAAAA+GGG - chr1_1:39644844-39644863 Msa0021870:CDS 35.0%
!!! GTTTTCCAAGTTGTTTTTGG+TGG - chr1_1:39644985-39645004 Msa0021870:intron 35.0%
GGGGTTAATGGAATGAAAAT+AGG + chr1_1:39645016-39645035 None:intergenic 35.0%
CATGATTACTTAGGGGTTAA+TGG + chr1_1:39645028-39645047 None:intergenic 35.0%
AAGCTAGCAGTATAATGCAA+AGG - chr1_1:39645091-39645110 Msa0021870:intron 35.0%
AATACCCTAGAGAGAACAAA+AGG + chr1_1:39645156-39645175 None:intergenic 35.0%
! TACGTCTGAACCTTTTAAAC+CGG - chr1_1:39645210-39645229 Msa0021870:intron 35.0%
!!! AGTTTTGAAGAATGAGAGAG+AGG - chr1_1:39645597-39645616 Msa0021870:intron 35.0%
! AAGGGCATGAGATTTAGAAA+AGG - chr1_1:39645624-39645643 Msa0021870:intron 35.0%
CATGAGATTTAGAAAAGGTG+AGG - chr1_1:39645629-39645648 Msa0021870:intron 35.0%
TCCATTGTCCTTTACATCAT+TGG - chr1_1:39645948-39645967 Msa0021870:CDS 35.0%
TATCTAGGCCAATGATGTAA+AGG + chr1_1:39645959-39645978 None:intergenic 35.0%
! ATTGGCCTAGATACATTCTA+TGG - chr1_1:39645966-39645985 Msa0021870:CDS 35.0%
CAAGACCATAGAATGTATCT+AGG + chr1_1:39645974-39645993 None:intergenic 35.0%
! CTTGCTTGCTTAGGAATTTT+TGG + chr1_1:39646259-39646278 None:intergenic 35.0%
! GGCATTTTCAAAGGGTTTTT+AGG - chr1_1:39646301-39646320 Msa0021870:CDS 35.0%
TCTCTTGTGACTTTCACAAT+CGG + chr1_1:39646334-39646353 None:intergenic 35.0%
CACAAGAGAATTATAAGCCA+AGG - chr1_1:39646345-39646364 Msa0021870:CDS 35.0%
! ATCATTTGGTGATTGATTGG+TGG + chr1_1:39646479-39646498 None:intergenic 35.0%
! GGTATCATTTGGTGATTGAT+TGG + chr1_1:39646482-39646501 None:intergenic 35.0%
! TGCATAGGAATTTTGTATGC+TGG + chr1_1:39646639-39646658 None:intergenic 35.0%
AGTTCTTGTTGCAATTGTGT+CGG + chr1_1:39646677-39646696 None:intergenic 35.0%
TATCGCAAGAAAGAAGAAGA+AGG + chr1_1:39647162-39647181 None:intergenic 35.0%
TCTTCTTCTTCTTACAGTTC+CGG - chr1_1:39647184-39647203 Msa0021870:CDS 35.0%
AATCAAGAAGAAAGACGAAG+CGG + chr1_1:39647448-39647467 None:intergenic 35.0%
TTCGTCTTTCTTCTTGATTC+TGG - chr1_1:39647449-39647468 Msa0021870:CDS 35.0%
! CTTTCTTCTTGATTCTGGTT+CGG - chr1_1:39647454-39647473 Msa0021870:CDS 35.0%
TGATGATTGTATCTCAGCAA+TGG - chr1_1:39642503-39642522 Msa0021870:CDS 35.0%
! CCTGGATTTAGTTCAATCTT+GGG + chr1_1:39642637-39642656 None:intergenic 35.0%
! TCCTGGATTTAGTTCAATCT+TGG + chr1_1:39642638-39642657 None:intergenic 35.0%
TATGATGTTGAGTTTCCAAG+AGG - chr1_1:39642679-39642698 Msa0021870:CDS 35.0%
TTGAGTGAAATATGACCTCT+TGG + chr1_1:39642697-39642716 None:intergenic 35.0%
TGTAGATAAGTTTGATGGAG+AGG + chr1_1:39642763-39642782 None:intergenic 35.0%
GGTATCTTATAACAACCCAA+TGG + chr1_1:39642786-39642805 None:intergenic 35.0%
!!! TTGGTGTCACATTTTTAGGT+TGG + chr1_1:39642810-39642829 None:intergenic 35.0%
! AAATAATGGCTTTTGCCAAG+AGG - chr1_1:39642858-39642877 Msa0021870:intron 35.0%
ACTGTCCTAAAATATCCTCT+TGG + chr1_1:39642876-39642895 None:intergenic 35.0%
ACATATATTCCAGACCCTTA+TGG - chr1_1:39642931-39642950 Msa0021870:CDS 35.0%
AATCCTGCTGAAATTCCAAA+AGG - chr1_1:39642967-39642986 Msa0021870:CDS 35.0%
ATCCTGCTGAAATTCCAAAA+GGG - chr1_1:39642968-39642987 Msa0021870:CDS 35.0%
! TGAAATTCCAAAAGGGTATG+TGG - chr1_1:39642975-39642994 Msa0021870:CDS 35.0%
TGCAAACCCCCTTTATAATT+TGG + chr1_1:39643123-39643142 None:intergenic 35.0%
!! ATCTTGCACTTGCTATTATC+AGG + chr1_1:39643153-39643172 None:intergenic 35.0%
ATAATAGCAAGTGCAAGATG+AGG - chr1_1:39643154-39643173 Msa0021870:intron 35.0%
GAGTATAAAGCATGATTGCA+AGG - chr1_1:39643323-39643342 Msa0021870:intron 35.0%
! CATAACCTCCATTTTGCATT+GGG + chr1_1:39643629-39643648 None:intergenic 35.0%
! ACATAACCTCCATTTTGCAT+TGG + chr1_1:39643630-39643649 None:intergenic 35.0%
AATGGAGGTTATGTCATCTA+TGG - chr1_1:39643636-39643655 Msa0021870:intron 35.0%
GCAATTGGATCAACTCTATA+TGG - chr1_1:39643681-39643700 Msa0021870:intron 35.0%
TGGTTGTGTAAATGTTAGGA+TGG - chr1_1:39643961-39643980 Msa0021870:intron 35.0%
GGTTGTGTAAATGTTAGGAT+GGG - chr1_1:39643962-39643981 Msa0021870:intron 35.0%
CCCAAAATATGGAAATGGAA+AGG - chr1_1:39644005-39644024 Msa0021870:intron 35.0%
TTAAGTATCTTGATAGAGCC+TGG + chr1_1:39644084-39644103 None:intergenic 35.0%
GGCTCTATCAAGATACTTAA+TGG - chr1_1:39644084-39644103 Msa0021870:intron 35.0%
TGGTGAAACTTTAACTCTAG+AGG - chr1_1:39644104-39644123 Msa0021870:intron 35.0%
GATAGGAATGTTAGACATGA+TGG + chr1_1:39644206-39644225 None:intergenic 35.0%
GAGGAATTGTTAATGGTTTG+AGG - chr1_1:39644594-39644613 Msa0021870:intron 35.0%
CAAAACAATACATCACGTGA+AGG - chr1_1:39644724-39644743 Msa0021870:intron 35.0%
AATACATCACGTGAAGGATT+GGG - chr1_1:39644730-39644749 Msa0021870:intron 35.0%
AGTTACAATGCATTGCAAGA+CGG - chr1_1:39644825-39644844 Msa0021870:intron 35.0%
ACGGAAGAATGCTTGAAAAA+GGG - chr1_1:39644844-39644863 Msa0021870:CDS 35.0%
!!! GTTTTCCAAGTTGTTTTTGG+TGG - chr1_1:39644985-39645004 Msa0021870:intron 35.0%
GGGGTTAATGGAATGAAAAT+AGG + chr1_1:39645016-39645035 None:intergenic 35.0%
CATGATTACTTAGGGGTTAA+TGG + chr1_1:39645028-39645047 None:intergenic 35.0%
AAGCTAGCAGTATAATGCAA+AGG - chr1_1:39645091-39645110 Msa0021870:intron 35.0%
AATACCCTAGAGAGAACAAA+AGG + chr1_1:39645156-39645175 None:intergenic 35.0%
! TACGTCTGAACCTTTTAAAC+CGG - chr1_1:39645210-39645229 Msa0021870:intron 35.0%
!!! AGTTTTGAAGAATGAGAGAG+AGG - chr1_1:39645597-39645616 Msa0021870:intron 35.0%
! AAGGGCATGAGATTTAGAAA+AGG - chr1_1:39645624-39645643 Msa0021870:intron 35.0%
CATGAGATTTAGAAAAGGTG+AGG - chr1_1:39645629-39645648 Msa0021870:intron 35.0%
TCCATTGTCCTTTACATCAT+TGG - chr1_1:39645948-39645967 Msa0021870:CDS 35.0%
TATCTAGGCCAATGATGTAA+AGG + chr1_1:39645959-39645978 None:intergenic 35.0%
! ATTGGCCTAGATACATTCTA+TGG - chr1_1:39645966-39645985 Msa0021870:CDS 35.0%
CAAGACCATAGAATGTATCT+AGG + chr1_1:39645974-39645993 None:intergenic 35.0%
! CTTGCTTGCTTAGGAATTTT+TGG + chr1_1:39646259-39646278 None:intergenic 35.0%
! GGCATTTTCAAAGGGTTTTT+AGG - chr1_1:39646301-39646320 Msa0021870:CDS 35.0%
TCTCTTGTGACTTTCACAAT+CGG + chr1_1:39646334-39646353 None:intergenic 35.0%
CACAAGAGAATTATAAGCCA+AGG - chr1_1:39646345-39646364 Msa0021870:CDS 35.0%
! ATCATTTGGTGATTGATTGG+TGG + chr1_1:39646479-39646498 None:intergenic 35.0%
! GGTATCATTTGGTGATTGAT+TGG + chr1_1:39646482-39646501 None:intergenic 35.0%
! TGCATAGGAATTTTGTATGC+TGG + chr1_1:39646639-39646658 None:intergenic 35.0%
AGTTCTTGTTGCAATTGTGT+CGG + chr1_1:39646677-39646696 None:intergenic 35.0%
TATCGCAAGAAAGAAGAAGA+AGG + chr1_1:39647162-39647181 None:intergenic 35.0%
TCTTCTTCTTCTTACAGTTC+CGG - chr1_1:39647184-39647203 Msa0021870:CDS 35.0%
AATCAAGAAGAAAGACGAAG+CGG + chr1_1:39647448-39647467 None:intergenic 35.0%
TTCGTCTTTCTTCTTGATTC+TGG - chr1_1:39647449-39647468 Msa0021870:CDS 35.0%
! CTTTCTTCTTGATTCTGGTT+CGG - chr1_1:39647454-39647473 Msa0021870:CDS 35.0%
TGATGATTGTATCTCAGCAA+TGG - chr1_1:39642503-39642522 Msa0021870:CDS 35.0%
! CCTGGATTTAGTTCAATCTT+GGG + chr1_1:39642637-39642656 None:intergenic 35.0%
! TCCTGGATTTAGTTCAATCT+TGG + chr1_1:39642638-39642657 None:intergenic 35.0%
TATGATGTTGAGTTTCCAAG+AGG - chr1_1:39642679-39642698 Msa0021870:CDS 35.0%
TTGAGTGAAATATGACCTCT+TGG + chr1_1:39642697-39642716 None:intergenic 35.0%
TGTAGATAAGTTTGATGGAG+AGG + chr1_1:39642763-39642782 None:intergenic 35.0%
GGTATCTTATAACAACCCAA+TGG + chr1_1:39642786-39642805 None:intergenic 35.0%
!!! TTGGTGTCACATTTTTAGGT+TGG + chr1_1:39642810-39642829 None:intergenic 35.0%
! AAATAATGGCTTTTGCCAAG+AGG - chr1_1:39642858-39642877 Msa0021870:intron 35.0%
ACTGTCCTAAAATATCCTCT+TGG + chr1_1:39642876-39642895 None:intergenic 35.0%
ACATATATTCCAGACCCTTA+TGG - chr1_1:39642931-39642950 Msa0021870:CDS 35.0%
AATCCTGCTGAAATTCCAAA+AGG - chr1_1:39642967-39642986 Msa0021870:CDS 35.0%
ATCCTGCTGAAATTCCAAAA+GGG - chr1_1:39642968-39642987 Msa0021870:CDS 35.0%
! TGAAATTCCAAAAGGGTATG+TGG - chr1_1:39642975-39642994 Msa0021870:CDS 35.0%
TGCAAACCCCCTTTATAATT+TGG + chr1_1:39643123-39643142 None:intergenic 35.0%
!! ATCTTGCACTTGCTATTATC+AGG + chr1_1:39643153-39643172 None:intergenic 35.0%
ATAATAGCAAGTGCAAGATG+AGG - chr1_1:39643154-39643173 Msa0021870:intron 35.0%
GAGTATAAAGCATGATTGCA+AGG - chr1_1:39643323-39643342 Msa0021870:intron 35.0%
! CATAACCTCCATTTTGCATT+GGG + chr1_1:39643629-39643648 None:intergenic 35.0%
! ACATAACCTCCATTTTGCAT+TGG + chr1_1:39643630-39643649 None:intergenic 35.0%
AATGGAGGTTATGTCATCTA+TGG - chr1_1:39643636-39643655 Msa0021870:intron 35.0%
GCAATTGGATCAACTCTATA+TGG - chr1_1:39643681-39643700 Msa0021870:intron 35.0%
TGGTTGTGTAAATGTTAGGA+TGG - chr1_1:39643961-39643980 Msa0021870:intron 35.0%
GGTTGTGTAAATGTTAGGAT+GGG - chr1_1:39643962-39643981 Msa0021870:intron 35.0%
CCCAAAATATGGAAATGGAA+AGG - chr1_1:39644005-39644024 Msa0021870:intron 35.0%
TTAAGTATCTTGATAGAGCC+TGG + chr1_1:39644084-39644103 None:intergenic 35.0%
GGCTCTATCAAGATACTTAA+TGG - chr1_1:39644084-39644103 Msa0021870:intron 35.0%
TGGTGAAACTTTAACTCTAG+AGG - chr1_1:39644104-39644123 Msa0021870:intron 35.0%
GATAGGAATGTTAGACATGA+TGG + chr1_1:39644206-39644225 None:intergenic 35.0%
GAGGAATTGTTAATGGTTTG+AGG - chr1_1:39644594-39644613 Msa0021870:intron 35.0%
CAAAACAATACATCACGTGA+AGG - chr1_1:39644724-39644743 Msa0021870:intron 35.0%
AATACATCACGTGAAGGATT+GGG - chr1_1:39644730-39644749 Msa0021870:intron 35.0%
AGTTACAATGCATTGCAAGA+CGG - chr1_1:39644825-39644844 Msa0021870:intron 35.0%
ACGGAAGAATGCTTGAAAAA+GGG - chr1_1:39644844-39644863 Msa0021870:CDS 35.0%
!!! GTTTTCCAAGTTGTTTTTGG+TGG - chr1_1:39644985-39645004 Msa0021870:intron 35.0%
GGGGTTAATGGAATGAAAAT+AGG + chr1_1:39645016-39645035 None:intergenic 35.0%
CATGATTACTTAGGGGTTAA+TGG + chr1_1:39645028-39645047 None:intergenic 35.0%
AAGCTAGCAGTATAATGCAA+AGG - chr1_1:39645091-39645110 Msa0021870:intron 35.0%
AATACCCTAGAGAGAACAAA+AGG + chr1_1:39645156-39645175 None:intergenic 35.0%
! TACGTCTGAACCTTTTAAAC+CGG - chr1_1:39645210-39645229 Msa0021870:intron 35.0%
!!! AGTTTTGAAGAATGAGAGAG+AGG - chr1_1:39645597-39645616 Msa0021870:intron 35.0%
! AAGGGCATGAGATTTAGAAA+AGG - chr1_1:39645624-39645643 Msa0021870:intron 35.0%
CATGAGATTTAGAAAAGGTG+AGG - chr1_1:39645629-39645648 Msa0021870:intron 35.0%
TCCATTGTCCTTTACATCAT+TGG - chr1_1:39645948-39645967 Msa0021870:CDS 35.0%
TATCTAGGCCAATGATGTAA+AGG + chr1_1:39645959-39645978 None:intergenic 35.0%
! ATTGGCCTAGATACATTCTA+TGG - chr1_1:39645966-39645985 Msa0021870:CDS 35.0%
CAAGACCATAGAATGTATCT+AGG + chr1_1:39645974-39645993 None:intergenic 35.0%
! CTTGCTTGCTTAGGAATTTT+TGG + chr1_1:39646259-39646278 None:intergenic 35.0%
! GGCATTTTCAAAGGGTTTTT+AGG - chr1_1:39646301-39646320 Msa0021870:CDS 35.0%
TCTCTTGTGACTTTCACAAT+CGG + chr1_1:39646334-39646353 None:intergenic 35.0%
CACAAGAGAATTATAAGCCA+AGG - chr1_1:39646345-39646364 Msa0021870:CDS 35.0%
! ATCATTTGGTGATTGATTGG+TGG + chr1_1:39646479-39646498 None:intergenic 35.0%
! GGTATCATTTGGTGATTGAT+TGG + chr1_1:39646482-39646501 None:intergenic 35.0%
! TGCATAGGAATTTTGTATGC+TGG + chr1_1:39646639-39646658 None:intergenic 35.0%
AGTTCTTGTTGCAATTGTGT+CGG + chr1_1:39646677-39646696 None:intergenic 35.0%
TATCGCAAGAAAGAAGAAGA+AGG + chr1_1:39647162-39647181 None:intergenic 35.0%
TCTTCTTCTTCTTACAGTTC+CGG - chr1_1:39647184-39647203 Msa0021870:CDS 35.0%
AATCAAGAAGAAAGACGAAG+CGG + chr1_1:39647448-39647467 None:intergenic 35.0%
TTCGTCTTTCTTCTTGATTC+TGG - chr1_1:39647449-39647468 Msa0021870:CDS 35.0%
! CTTTCTTCTTGATTCTGGTT+CGG - chr1_1:39647454-39647473 Msa0021870:CDS 35.0%
TGATGATTGTATCTCAGCAA+TGG - chr1_1:39642503-39642522 Msa0021870:CDS 35.0%
! CCTGGATTTAGTTCAATCTT+GGG + chr1_1:39642637-39642656 None:intergenic 35.0%
! TCCTGGATTTAGTTCAATCT+TGG + chr1_1:39642638-39642657 None:intergenic 35.0%
TATGATGTTGAGTTTCCAAG+AGG - chr1_1:39642679-39642698 Msa0021870:CDS 35.0%
TTGAGTGAAATATGACCTCT+TGG + chr1_1:39642697-39642716 None:intergenic 35.0%
TGTAGATAAGTTTGATGGAG+AGG + chr1_1:39642763-39642782 None:intergenic 35.0%
GGTATCTTATAACAACCCAA+TGG + chr1_1:39642786-39642805 None:intergenic 35.0%
!!! TTGGTGTCACATTTTTAGGT+TGG + chr1_1:39642810-39642829 None:intergenic 35.0%
! AAATAATGGCTTTTGCCAAG+AGG - chr1_1:39642858-39642877 Msa0021870:intron 35.0%
ACTGTCCTAAAATATCCTCT+TGG + chr1_1:39642876-39642895 None:intergenic 35.0%
ACATATATTCCAGACCCTTA+TGG - chr1_1:39642931-39642950 Msa0021870:CDS 35.0%
AATCCTGCTGAAATTCCAAA+AGG - chr1_1:39642967-39642986 Msa0021870:CDS 35.0%
ATCCTGCTGAAATTCCAAAA+GGG - chr1_1:39642968-39642987 Msa0021870:CDS 35.0%
! TGAAATTCCAAAAGGGTATG+TGG - chr1_1:39642975-39642994 Msa0021870:CDS 35.0%
TGCAAACCCCCTTTATAATT+TGG + chr1_1:39643123-39643142 None:intergenic 35.0%
!! ATCTTGCACTTGCTATTATC+AGG + chr1_1:39643153-39643172 None:intergenic 35.0%
ATAATAGCAAGTGCAAGATG+AGG - chr1_1:39643154-39643173 Msa0021870:intron 35.0%
GAGTATAAAGCATGATTGCA+AGG - chr1_1:39643323-39643342 Msa0021870:intron 35.0%
! CATAACCTCCATTTTGCATT+GGG + chr1_1:39643629-39643648 None:intergenic 35.0%
! ACATAACCTCCATTTTGCAT+TGG + chr1_1:39643630-39643649 None:intergenic 35.0%
AATGGAGGTTATGTCATCTA+TGG - chr1_1:39643636-39643655 Msa0021870:intron 35.0%
GCAATTGGATCAACTCTATA+TGG - chr1_1:39643681-39643700 Msa0021870:intron 35.0%
TGGTTGTGTAAATGTTAGGA+TGG - chr1_1:39643961-39643980 Msa0021870:intron 35.0%
GGTTGTGTAAATGTTAGGAT+GGG - chr1_1:39643962-39643981 Msa0021870:intron 35.0%
CCCAAAATATGGAAATGGAA+AGG - chr1_1:39644005-39644024 Msa0021870:intron 35.0%
TTAAGTATCTTGATAGAGCC+TGG + chr1_1:39644084-39644103 None:intergenic 35.0%
GGCTCTATCAAGATACTTAA+TGG - chr1_1:39644084-39644103 Msa0021870:intron 35.0%
TGGTGAAACTTTAACTCTAG+AGG - chr1_1:39644104-39644123 Msa0021870:intron 35.0%
GATAGGAATGTTAGACATGA+TGG + chr1_1:39644206-39644225 None:intergenic 35.0%
GAGGAATTGTTAATGGTTTG+AGG - chr1_1:39644594-39644613 Msa0021870:intron 35.0%
CAAAACAATACATCACGTGA+AGG - chr1_1:39644724-39644743 Msa0021870:intron 35.0%
AATACATCACGTGAAGGATT+GGG - chr1_1:39644730-39644749 Msa0021870:intron 35.0%
AGTTACAATGCATTGCAAGA+CGG - chr1_1:39644825-39644844 Msa0021870:intron 35.0%
ACGGAAGAATGCTTGAAAAA+GGG - chr1_1:39644844-39644863 Msa0021870:CDS 35.0%
!!! GTTTTCCAAGTTGTTTTTGG+TGG - chr1_1:39644985-39645004 Msa0021870:intron 35.0%
GGGGTTAATGGAATGAAAAT+AGG + chr1_1:39645016-39645035 None:intergenic 35.0%
CATGATTACTTAGGGGTTAA+TGG + chr1_1:39645028-39645047 None:intergenic 35.0%
AAGCTAGCAGTATAATGCAA+AGG - chr1_1:39645091-39645110 Msa0021870:intron 35.0%
AATACCCTAGAGAGAACAAA+AGG + chr1_1:39645156-39645175 None:intergenic 35.0%
! TACGTCTGAACCTTTTAAAC+CGG - chr1_1:39645210-39645229 Msa0021870:intron 35.0%
!!! AGTTTTGAAGAATGAGAGAG+AGG - chr1_1:39645597-39645616 Msa0021870:intron 35.0%
! AAGGGCATGAGATTTAGAAA+AGG - chr1_1:39645624-39645643 Msa0021870:intron 35.0%
CATGAGATTTAGAAAAGGTG+AGG - chr1_1:39645629-39645648 Msa0021870:intron 35.0%
TCCATTGTCCTTTACATCAT+TGG - chr1_1:39645948-39645967 Msa0021870:CDS 35.0%
TATCTAGGCCAATGATGTAA+AGG + chr1_1:39645959-39645978 None:intergenic 35.0%
! ATTGGCCTAGATACATTCTA+TGG - chr1_1:39645966-39645985 Msa0021870:CDS 35.0%
CAAGACCATAGAATGTATCT+AGG + chr1_1:39645974-39645993 None:intergenic 35.0%
! CTTGCTTGCTTAGGAATTTT+TGG + chr1_1:39646259-39646278 None:intergenic 35.0%
! GGCATTTTCAAAGGGTTTTT+AGG - chr1_1:39646301-39646320 Msa0021870:CDS 35.0%
TCTCTTGTGACTTTCACAAT+CGG + chr1_1:39646334-39646353 None:intergenic 35.0%
CACAAGAGAATTATAAGCCA+AGG - chr1_1:39646345-39646364 Msa0021870:CDS 35.0%
! ATCATTTGGTGATTGATTGG+TGG + chr1_1:39646479-39646498 None:intergenic 35.0%
! GGTATCATTTGGTGATTGAT+TGG + chr1_1:39646482-39646501 None:intergenic 35.0%
! TGCATAGGAATTTTGTATGC+TGG + chr1_1:39646639-39646658 None:intergenic 35.0%
AGTTCTTGTTGCAATTGTGT+CGG + chr1_1:39646677-39646696 None:intergenic 35.0%
TATCGCAAGAAAGAAGAAGA+AGG + chr1_1:39647162-39647181 None:intergenic 35.0%
TCTTCTTCTTCTTACAGTTC+CGG - chr1_1:39647184-39647203 Msa0021870:CDS 35.0%
AATCAAGAAGAAAGACGAAG+CGG + chr1_1:39647448-39647467 None:intergenic 35.0%
TTCGTCTTTCTTCTTGATTC+TGG - chr1_1:39647449-39647468 Msa0021870:CDS 35.0%
! CTTTCTTCTTGATTCTGGTT+CGG - chr1_1:39647454-39647473 Msa0021870:CDS 35.0%
TGATGATTGTATCTCAGCAA+TGG - chr1_1:39642503-39642522 Msa0021870:CDS 35.0%
! CCTGGATTTAGTTCAATCTT+GGG + chr1_1:39642637-39642656 None:intergenic 35.0%
! TCCTGGATTTAGTTCAATCT+TGG + chr1_1:39642638-39642657 None:intergenic 35.0%
TATGATGTTGAGTTTCCAAG+AGG - chr1_1:39642679-39642698 Msa0021870:CDS 35.0%
TTGAGTGAAATATGACCTCT+TGG + chr1_1:39642697-39642716 None:intergenic 35.0%
TGTAGATAAGTTTGATGGAG+AGG + chr1_1:39642763-39642782 None:intergenic 35.0%
GGTATCTTATAACAACCCAA+TGG + chr1_1:39642786-39642805 None:intergenic 35.0%
!!! TTGGTGTCACATTTTTAGGT+TGG + chr1_1:39642810-39642829 None:intergenic 35.0%
! AAATAATGGCTTTTGCCAAG+AGG - chr1_1:39642858-39642877 Msa0021870:intron 35.0%
ACTGTCCTAAAATATCCTCT+TGG + chr1_1:39642876-39642895 None:intergenic 35.0%
ACATATATTCCAGACCCTTA+TGG - chr1_1:39642931-39642950 Msa0021870:CDS 35.0%
AATCCTGCTGAAATTCCAAA+AGG - chr1_1:39642967-39642986 Msa0021870:CDS 35.0%
ATCCTGCTGAAATTCCAAAA+GGG - chr1_1:39642968-39642987 Msa0021870:CDS 35.0%
! TGAAATTCCAAAAGGGTATG+TGG - chr1_1:39642975-39642994 Msa0021870:CDS 35.0%
TGCAAACCCCCTTTATAATT+TGG + chr1_1:39643123-39643142 None:intergenic 35.0%
!! ATCTTGCACTTGCTATTATC+AGG + chr1_1:39643153-39643172 None:intergenic 35.0%
ATAATAGCAAGTGCAAGATG+AGG - chr1_1:39643154-39643173 Msa0021870:intron 35.0%
GAGTATAAAGCATGATTGCA+AGG - chr1_1:39643323-39643342 Msa0021870:intron 35.0%
! CATAACCTCCATTTTGCATT+GGG + chr1_1:39643629-39643648 None:intergenic 35.0%
! ACATAACCTCCATTTTGCAT+TGG + chr1_1:39643630-39643649 None:intergenic 35.0%
AATGGAGGTTATGTCATCTA+TGG - chr1_1:39643636-39643655 Msa0021870:intron 35.0%
GCAATTGGATCAACTCTATA+TGG - chr1_1:39643681-39643700 Msa0021870:intron 35.0%
TGGTTGTGTAAATGTTAGGA+TGG - chr1_1:39643961-39643980 Msa0021870:intron 35.0%
GGTTGTGTAAATGTTAGGAT+GGG - chr1_1:39643962-39643981 Msa0021870:intron 35.0%
CCCAAAATATGGAAATGGAA+AGG - chr1_1:39644005-39644024 Msa0021870:intron 35.0%
TTAAGTATCTTGATAGAGCC+TGG + chr1_1:39644084-39644103 None:intergenic 35.0%
GGCTCTATCAAGATACTTAA+TGG - chr1_1:39644084-39644103 Msa0021870:intron 35.0%
TGGTGAAACTTTAACTCTAG+AGG - chr1_1:39644104-39644123 Msa0021870:intron 35.0%
GATAGGAATGTTAGACATGA+TGG + chr1_1:39644206-39644225 None:intergenic 35.0%
GAGGAATTGTTAATGGTTTG+AGG - chr1_1:39644594-39644613 Msa0021870:intron 35.0%
CAAAACAATACATCACGTGA+AGG - chr1_1:39644724-39644743 Msa0021870:intron 35.0%
AATACATCACGTGAAGGATT+GGG - chr1_1:39644730-39644749 Msa0021870:intron 35.0%
AGTTACAATGCATTGCAAGA+CGG - chr1_1:39644825-39644844 Msa0021870:intron 35.0%
ACGGAAGAATGCTTGAAAAA+GGG - chr1_1:39644844-39644863 Msa0021870:CDS 35.0%
!!! GTTTTCCAAGTTGTTTTTGG+TGG - chr1_1:39644985-39645004 Msa0021870:intron 35.0%
GGGGTTAATGGAATGAAAAT+AGG + chr1_1:39645016-39645035 None:intergenic 35.0%
CATGATTACTTAGGGGTTAA+TGG + chr1_1:39645028-39645047 None:intergenic 35.0%
AAGCTAGCAGTATAATGCAA+AGG - chr1_1:39645091-39645110 Msa0021870:intron 35.0%
AATACCCTAGAGAGAACAAA+AGG + chr1_1:39645156-39645175 None:intergenic 35.0%
! TACGTCTGAACCTTTTAAAC+CGG - chr1_1:39645210-39645229 Msa0021870:intron 35.0%
!!! AGTTTTGAAGAATGAGAGAG+AGG - chr1_1:39645597-39645616 Msa0021870:intron 35.0%
! AAGGGCATGAGATTTAGAAA+AGG - chr1_1:39645624-39645643 Msa0021870:intron 35.0%
CATGAGATTTAGAAAAGGTG+AGG - chr1_1:39645629-39645648 Msa0021870:intron 35.0%
TCCATTGTCCTTTACATCAT+TGG - chr1_1:39645948-39645967 Msa0021870:CDS 35.0%
TATCTAGGCCAATGATGTAA+AGG + chr1_1:39645959-39645978 None:intergenic 35.0%
! ATTGGCCTAGATACATTCTA+TGG - chr1_1:39645966-39645985 Msa0021870:CDS 35.0%
CAAGACCATAGAATGTATCT+AGG + chr1_1:39645974-39645993 None:intergenic 35.0%
! CTTGCTTGCTTAGGAATTTT+TGG + chr1_1:39646259-39646278 None:intergenic 35.0%
! GGCATTTTCAAAGGGTTTTT+AGG - chr1_1:39646301-39646320 Msa0021870:CDS 35.0%
TCTCTTGTGACTTTCACAAT+CGG + chr1_1:39646334-39646353 None:intergenic 35.0%
CACAAGAGAATTATAAGCCA+AGG - chr1_1:39646345-39646364 Msa0021870:CDS 35.0%
! ATCATTTGGTGATTGATTGG+TGG + chr1_1:39646479-39646498 None:intergenic 35.0%
! GGTATCATTTGGTGATTGAT+TGG + chr1_1:39646482-39646501 None:intergenic 35.0%
! TGCATAGGAATTTTGTATGC+TGG + chr1_1:39646639-39646658 None:intergenic 35.0%
AGTTCTTGTTGCAATTGTGT+CGG + chr1_1:39646677-39646696 None:intergenic 35.0%
TATCGCAAGAAAGAAGAAGA+AGG + chr1_1:39647162-39647181 None:intergenic 35.0%
TCTTCTTCTTCTTACAGTTC+CGG - chr1_1:39647184-39647203 Msa0021870:CDS 35.0%
AATCAAGAAGAAAGACGAAG+CGG + chr1_1:39647448-39647467 None:intergenic 35.0%
TTCGTCTTTCTTCTTGATTC+TGG - chr1_1:39647449-39647468 Msa0021870:CDS 35.0%
! CTTTCTTCTTGATTCTGGTT+CGG - chr1_1:39647454-39647473 Msa0021870:CDS 35.0%
CTAGCACTAGTGTTCTTGTT+AGG - chr1_1:39642544-39642563 Msa0021870:CDS 40.0%
CATTCTCATTAGCTGCTACT+AGG - chr1_1:39642572-39642591 Msa0021870:CDS 40.0%
CCCAAGATTGAACTAAATCC+AGG - chr1_1:39642634-39642653 Msa0021870:CDS 40.0%
!!! GTGTCACATTTTTAGGTTGG+TGG + chr1_1:39642807-39642826 None:intergenic 40.0%
TTAGGACAGTACTATGGTCT+TGG - chr1_1:39642886-39642905 Msa0021870:intron 40.0%
! ACAGTACTATGGTCTTGGAT+CGG - chr1_1:39642891-39642910 Msa0021870:intron 40.0%
ACTTCTATACCATAAGGGTC+TGG + chr1_1:39642943-39642962 None:intergenic 40.0%
GACCCTTATGGTATAGAAGT+TGG - chr1_1:39642943-39642962 Msa0021870:CDS 40.0%
!!! TACCCTTTTGGAATTTCAGC+AGG + chr1_1:39642973-39642992 None:intergenic 40.0%
! CATTTCTCCACATACCCTTT+TGG + chr1_1:39642985-39643004 None:intergenic 40.0%
! CAAAAGGGTATGTGGAGAAA+TGG - chr1_1:39642983-39643002 Msa0021870:CDS 40.0%
ATGTTCATGCAATCGATACG+AGG - chr1_1:39643013-39643032 Msa0021870:CDS 40.0%
TGTTCATGCAATCGATACGA+GGG - chr1_1:39643014-39643033 Msa0021870:CDS 40.0%
GGATGTTAACTTTATGGTGC+CGG - chr1_1:39643239-39643258 Msa0021870:intron 40.0%
!! CTCACATTACTTTTGCTGCA+TGG + chr1_1:39643570-39643589 None:intergenic 40.0%
GGTTATGTCATCTATGGAGT+TGG - chr1_1:39643642-39643661 Msa0021870:intron 40.0%
CATCTACATACAGGTGCAAT+TGG - chr1_1:39643666-39643685 Msa0021870:intron 40.0%
TGGATCAACTCTATATGGAC+AGG - chr1_1:39643686-39643705 Msa0021870:intron 40.0%
GTGTAAATGTTAGGATGGGA+AGG - chr1_1:39643966-39643985 Msa0021870:intron 40.0%
TATGGAAATGGAAAGGAAGC+AGG - chr1_1:39644012-39644031 Msa0021870:intron 40.0%
AAGGAAGCAGGAAATGAGAA+AGG - chr1_1:39644024-39644043 Msa0021870:intron 40.0%
!! AGAAGACACTCTGGAGTAAT+GGG - chr1_1:39644144-39644163 Msa0021870:intron 40.0%
!!! GGGGCTTTTTTATTTCTTGG+TGG - chr1_1:39644164-39644183 Msa0021870:intron 40.0%
! GAATGTTAGACATGATGGTG+TGG + chr1_1:39644201-39644220 None:intergenic 40.0%
CAATACATCACGTGAAGGAT+TGG - chr1_1:39644729-39644748 Msa0021870:intron 40.0%
GACGGAAGAATGCTTGAAAA+AGG - chr1_1:39644843-39644862 Msa0021870:CDS 40.0%
GAAAACTATAGAATTCGCGC+AGG - chr1_1:39644869-39644888 Msa0021870:CDS 40.0%
! ATCCTCCTTTTGTTCTCTCT+AGG - chr1_1:39645148-39645167 Msa0021870:intron 40.0%
! TCCTCCTTTTGTTCTCTCTA+GGG - chr1_1:39645149-39645168 Msa0021870:intron 40.0%
! TGGAGGGAGAAGAATGTTTT+TGG - chr1_1:39645444-39645463 Msa0021870:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG + chr1_1:39645517-39645536 None:intergenic 40.0%
! GGTGGATTTGATCCCTTAAA+CGG + chr1_1:39645518-39645537 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr1_1:39645536-39645555 None:intergenic 40.0%
TTCTAAATCTCATGCCCTTG+AGG + chr1_1:39645623-39645642 None:intergenic 40.0%
GAGATTTAGAAAAGGTGAGG+TGG - chr1_1:39645632-39645651 Msa0021870:intron 40.0%
!! TCAATGGGATTTTGATCCCA+AGG - chr1_1:39645733-39645752 Msa0021870:intron 40.0%
GTATGTTTAGATGAAGGCCT+AGG + chr1_1:39645831-39645850 None:intergenic 40.0%
GCCAATGATGTAAAGGACAA+TGG + chr1_1:39645952-39645971 None:intergenic 40.0%
TCTTGTGACTTTCACAATCG+GGG + chr1_1:39646332-39646351 None:intergenic 40.0%
CTCTTGTGACTTTCACAATC+GGG + chr1_1:39646333-39646352 None:intergenic 40.0%
!! TGGTGATTGATTGGTGGTTT+TGG + chr1_1:39646473-39646492 None:intergenic 40.0%
! TGGATTTAGGATCGTTGCAT+AGG + chr1_1:39646654-39646673 None:intergenic 40.0%
GATCATTGGATCAATCCAAC+TGG - chr1_1:39647011-39647030 Msa0021870:CDS 40.0%
TTGGATCAATCCAACTGGAT+CGG - chr1_1:39647016-39647035 Msa0021870:CDS 40.0%
CACGTGAGTAAAAAAAACGC+AGG - chr1_1:39647135-39647154 Msa0021870:CDS 40.0%
TTTCTTCTTCGAATCGGATC+CGG + chr1_1:39647328-39647347 None:intergenic 40.0%
CGAAATTACCTCTCTTTCGA+CGG - chr1_1:39647409-39647428 Msa0021870:CDS 40.0%
CTAGCACTAGTGTTCTTGTT+AGG - chr1_1:39642544-39642563 Msa0021870:CDS 40.0%
CATTCTCATTAGCTGCTACT+AGG - chr1_1:39642572-39642591 Msa0021870:CDS 40.0%
CCCAAGATTGAACTAAATCC+AGG - chr1_1:39642634-39642653 Msa0021870:CDS 40.0%
!!! GTGTCACATTTTTAGGTTGG+TGG + chr1_1:39642807-39642826 None:intergenic 40.0%
TTAGGACAGTACTATGGTCT+TGG - chr1_1:39642886-39642905 Msa0021870:intron 40.0%
! ACAGTACTATGGTCTTGGAT+CGG - chr1_1:39642891-39642910 Msa0021870:intron 40.0%
ACTTCTATACCATAAGGGTC+TGG + chr1_1:39642943-39642962 None:intergenic 40.0%
GACCCTTATGGTATAGAAGT+TGG - chr1_1:39642943-39642962 Msa0021870:CDS 40.0%
!!! TACCCTTTTGGAATTTCAGC+AGG + chr1_1:39642973-39642992 None:intergenic 40.0%
! CATTTCTCCACATACCCTTT+TGG + chr1_1:39642985-39643004 None:intergenic 40.0%
! CAAAAGGGTATGTGGAGAAA+TGG - chr1_1:39642983-39643002 Msa0021870:CDS 40.0%
ATGTTCATGCAATCGATACG+AGG - chr1_1:39643013-39643032 Msa0021870:CDS 40.0%
TGTTCATGCAATCGATACGA+GGG - chr1_1:39643014-39643033 Msa0021870:CDS 40.0%
GGATGTTAACTTTATGGTGC+CGG - chr1_1:39643239-39643258 Msa0021870:intron 40.0%
!! CTCACATTACTTTTGCTGCA+TGG + chr1_1:39643570-39643589 None:intergenic 40.0%
GGTTATGTCATCTATGGAGT+TGG - chr1_1:39643642-39643661 Msa0021870:intron 40.0%
CATCTACATACAGGTGCAAT+TGG - chr1_1:39643666-39643685 Msa0021870:intron 40.0%
TGGATCAACTCTATATGGAC+AGG - chr1_1:39643686-39643705 Msa0021870:intron 40.0%
GTGTAAATGTTAGGATGGGA+AGG - chr1_1:39643966-39643985 Msa0021870:intron 40.0%
TATGGAAATGGAAAGGAAGC+AGG - chr1_1:39644012-39644031 Msa0021870:intron 40.0%
AAGGAAGCAGGAAATGAGAA+AGG - chr1_1:39644024-39644043 Msa0021870:intron 40.0%
!! AGAAGACACTCTGGAGTAAT+GGG - chr1_1:39644144-39644163 Msa0021870:intron 40.0%
!!! GGGGCTTTTTTATTTCTTGG+TGG - chr1_1:39644164-39644183 Msa0021870:intron 40.0%
! GAATGTTAGACATGATGGTG+TGG + chr1_1:39644201-39644220 None:intergenic 40.0%
CAATACATCACGTGAAGGAT+TGG - chr1_1:39644729-39644748 Msa0021870:intron 40.0%
GACGGAAGAATGCTTGAAAA+AGG - chr1_1:39644843-39644862 Msa0021870:CDS 40.0%
GAAAACTATAGAATTCGCGC+AGG - chr1_1:39644869-39644888 Msa0021870:CDS 40.0%
! ATCCTCCTTTTGTTCTCTCT+AGG - chr1_1:39645148-39645167 Msa0021870:intron 40.0%
! TCCTCCTTTTGTTCTCTCTA+GGG - chr1_1:39645149-39645168 Msa0021870:intron 40.0%
! TGGAGGGAGAAGAATGTTTT+TGG - chr1_1:39645444-39645463 Msa0021870:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG + chr1_1:39645517-39645536 None:intergenic 40.0%
! GGTGGATTTGATCCCTTAAA+CGG + chr1_1:39645518-39645537 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr1_1:39645536-39645555 None:intergenic 40.0%
TTCTAAATCTCATGCCCTTG+AGG + chr1_1:39645623-39645642 None:intergenic 40.0%
GAGATTTAGAAAAGGTGAGG+TGG - chr1_1:39645632-39645651 Msa0021870:intron 40.0%
!! TCAATGGGATTTTGATCCCA+AGG - chr1_1:39645733-39645752 Msa0021870:intron 40.0%
GTATGTTTAGATGAAGGCCT+AGG + chr1_1:39645831-39645850 None:intergenic 40.0%
GCCAATGATGTAAAGGACAA+TGG + chr1_1:39645952-39645971 None:intergenic 40.0%
TCTTGTGACTTTCACAATCG+GGG + chr1_1:39646332-39646351 None:intergenic 40.0%
CTCTTGTGACTTTCACAATC+GGG + chr1_1:39646333-39646352 None:intergenic 40.0%
!! TGGTGATTGATTGGTGGTTT+TGG + chr1_1:39646473-39646492 None:intergenic 40.0%
! TGGATTTAGGATCGTTGCAT+AGG + chr1_1:39646654-39646673 None:intergenic 40.0%
GATCATTGGATCAATCCAAC+TGG - chr1_1:39647011-39647030 Msa0021870:CDS 40.0%
TTGGATCAATCCAACTGGAT+CGG - chr1_1:39647016-39647035 Msa0021870:CDS 40.0%
CACGTGAGTAAAAAAAACGC+AGG - chr1_1:39647135-39647154 Msa0021870:CDS 40.0%
TTTCTTCTTCGAATCGGATC+CGG + chr1_1:39647328-39647347 None:intergenic 40.0%
CGAAATTACCTCTCTTTCGA+CGG - chr1_1:39647409-39647428 Msa0021870:CDS 40.0%
CTAGCACTAGTGTTCTTGTT+AGG - chr1_1:39642544-39642563 Msa0021870:CDS 40.0%
CATTCTCATTAGCTGCTACT+AGG - chr1_1:39642572-39642591 Msa0021870:CDS 40.0%
CCCAAGATTGAACTAAATCC+AGG - chr1_1:39642634-39642653 Msa0021870:CDS 40.0%
!!! GTGTCACATTTTTAGGTTGG+TGG + chr1_1:39642807-39642826 None:intergenic 40.0%
TTAGGACAGTACTATGGTCT+TGG - chr1_1:39642886-39642905 Msa0021870:intron 40.0%
! ACAGTACTATGGTCTTGGAT+CGG - chr1_1:39642891-39642910 Msa0021870:intron 40.0%
ACTTCTATACCATAAGGGTC+TGG + chr1_1:39642943-39642962 None:intergenic 40.0%
GACCCTTATGGTATAGAAGT+TGG - chr1_1:39642943-39642962 Msa0021870:CDS 40.0%
!!! TACCCTTTTGGAATTTCAGC+AGG + chr1_1:39642973-39642992 None:intergenic 40.0%
! CATTTCTCCACATACCCTTT+TGG + chr1_1:39642985-39643004 None:intergenic 40.0%
! CAAAAGGGTATGTGGAGAAA+TGG - chr1_1:39642983-39643002 Msa0021870:CDS 40.0%
ATGTTCATGCAATCGATACG+AGG - chr1_1:39643013-39643032 Msa0021870:CDS 40.0%
TGTTCATGCAATCGATACGA+GGG - chr1_1:39643014-39643033 Msa0021870:CDS 40.0%
GGATGTTAACTTTATGGTGC+CGG - chr1_1:39643239-39643258 Msa0021870:intron 40.0%
!! CTCACATTACTTTTGCTGCA+TGG + chr1_1:39643570-39643589 None:intergenic 40.0%
GGTTATGTCATCTATGGAGT+TGG - chr1_1:39643642-39643661 Msa0021870:intron 40.0%
CATCTACATACAGGTGCAAT+TGG - chr1_1:39643666-39643685 Msa0021870:intron 40.0%
TGGATCAACTCTATATGGAC+AGG - chr1_1:39643686-39643705 Msa0021870:intron 40.0%
GTGTAAATGTTAGGATGGGA+AGG - chr1_1:39643966-39643985 Msa0021870:intron 40.0%
TATGGAAATGGAAAGGAAGC+AGG - chr1_1:39644012-39644031 Msa0021870:intron 40.0%
AAGGAAGCAGGAAATGAGAA+AGG - chr1_1:39644024-39644043 Msa0021870:intron 40.0%
!! AGAAGACACTCTGGAGTAAT+GGG - chr1_1:39644144-39644163 Msa0021870:intron 40.0%
!!! GGGGCTTTTTTATTTCTTGG+TGG - chr1_1:39644164-39644183 Msa0021870:intron 40.0%
! GAATGTTAGACATGATGGTG+TGG + chr1_1:39644201-39644220 None:intergenic 40.0%
CAATACATCACGTGAAGGAT+TGG - chr1_1:39644729-39644748 Msa0021870:intron 40.0%
GACGGAAGAATGCTTGAAAA+AGG - chr1_1:39644843-39644862 Msa0021870:CDS 40.0%
GAAAACTATAGAATTCGCGC+AGG - chr1_1:39644869-39644888 Msa0021870:CDS 40.0%
! ATCCTCCTTTTGTTCTCTCT+AGG - chr1_1:39645148-39645167 Msa0021870:intron 40.0%
! TCCTCCTTTTGTTCTCTCTA+GGG - chr1_1:39645149-39645168 Msa0021870:intron 40.0%
! TGGAGGGAGAAGAATGTTTT+TGG - chr1_1:39645444-39645463 Msa0021870:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG + chr1_1:39645517-39645536 None:intergenic 40.0%
! GGTGGATTTGATCCCTTAAA+CGG + chr1_1:39645518-39645537 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr1_1:39645536-39645555 None:intergenic 40.0%
TTCTAAATCTCATGCCCTTG+AGG + chr1_1:39645623-39645642 None:intergenic 40.0%
GAGATTTAGAAAAGGTGAGG+TGG - chr1_1:39645632-39645651 Msa0021870:intron 40.0%
!! TCAATGGGATTTTGATCCCA+AGG - chr1_1:39645733-39645752 Msa0021870:intron 40.0%
GTATGTTTAGATGAAGGCCT+AGG + chr1_1:39645831-39645850 None:intergenic 40.0%
GCCAATGATGTAAAGGACAA+TGG + chr1_1:39645952-39645971 None:intergenic 40.0%
TCTTGTGACTTTCACAATCG+GGG + chr1_1:39646332-39646351 None:intergenic 40.0%
CTCTTGTGACTTTCACAATC+GGG + chr1_1:39646333-39646352 None:intergenic 40.0%
!! TGGTGATTGATTGGTGGTTT+TGG + chr1_1:39646473-39646492 None:intergenic 40.0%
! TGGATTTAGGATCGTTGCAT+AGG + chr1_1:39646654-39646673 None:intergenic 40.0%
GATCATTGGATCAATCCAAC+TGG - chr1_1:39647011-39647030 Msa0021870:CDS 40.0%
TTGGATCAATCCAACTGGAT+CGG - chr1_1:39647016-39647035 Msa0021870:CDS 40.0%
CACGTGAGTAAAAAAAACGC+AGG - chr1_1:39647135-39647154 Msa0021870:CDS 40.0%
TTTCTTCTTCGAATCGGATC+CGG + chr1_1:39647328-39647347 None:intergenic 40.0%
CGAAATTACCTCTCTTTCGA+CGG - chr1_1:39647409-39647428 Msa0021870:CDS 40.0%
CTAGCACTAGTGTTCTTGTT+AGG - chr1_1:39642544-39642563 Msa0021870:CDS 40.0%
CATTCTCATTAGCTGCTACT+AGG - chr1_1:39642572-39642591 Msa0021870:CDS 40.0%
CCCAAGATTGAACTAAATCC+AGG - chr1_1:39642634-39642653 Msa0021870:CDS 40.0%
!!! GTGTCACATTTTTAGGTTGG+TGG + chr1_1:39642807-39642826 None:intergenic 40.0%
TTAGGACAGTACTATGGTCT+TGG - chr1_1:39642886-39642905 Msa0021870:intron 40.0%
! ACAGTACTATGGTCTTGGAT+CGG - chr1_1:39642891-39642910 Msa0021870:intron 40.0%
ACTTCTATACCATAAGGGTC+TGG + chr1_1:39642943-39642962 None:intergenic 40.0%
GACCCTTATGGTATAGAAGT+TGG - chr1_1:39642943-39642962 Msa0021870:CDS 40.0%
!!! TACCCTTTTGGAATTTCAGC+AGG + chr1_1:39642973-39642992 None:intergenic 40.0%
! CATTTCTCCACATACCCTTT+TGG + chr1_1:39642985-39643004 None:intergenic 40.0%
! CAAAAGGGTATGTGGAGAAA+TGG - chr1_1:39642983-39643002 Msa0021870:CDS 40.0%
ATGTTCATGCAATCGATACG+AGG - chr1_1:39643013-39643032 Msa0021870:CDS 40.0%
TGTTCATGCAATCGATACGA+GGG - chr1_1:39643014-39643033 Msa0021870:CDS 40.0%
GGATGTTAACTTTATGGTGC+CGG - chr1_1:39643239-39643258 Msa0021870:intron 40.0%
!! CTCACATTACTTTTGCTGCA+TGG + chr1_1:39643570-39643589 None:intergenic 40.0%
GGTTATGTCATCTATGGAGT+TGG - chr1_1:39643642-39643661 Msa0021870:intron 40.0%
CATCTACATACAGGTGCAAT+TGG - chr1_1:39643666-39643685 Msa0021870:intron 40.0%
TGGATCAACTCTATATGGAC+AGG - chr1_1:39643686-39643705 Msa0021870:intron 40.0%
GTGTAAATGTTAGGATGGGA+AGG - chr1_1:39643966-39643985 Msa0021870:intron 40.0%
TATGGAAATGGAAAGGAAGC+AGG - chr1_1:39644012-39644031 Msa0021870:intron 40.0%
AAGGAAGCAGGAAATGAGAA+AGG - chr1_1:39644024-39644043 Msa0021870:intron 40.0%
!! AGAAGACACTCTGGAGTAAT+GGG - chr1_1:39644144-39644163 Msa0021870:intron 40.0%
!!! GGGGCTTTTTTATTTCTTGG+TGG - chr1_1:39644164-39644183 Msa0021870:intron 40.0%
! GAATGTTAGACATGATGGTG+TGG + chr1_1:39644201-39644220 None:intergenic 40.0%
CAATACATCACGTGAAGGAT+TGG - chr1_1:39644729-39644748 Msa0021870:intron 40.0%
GACGGAAGAATGCTTGAAAA+AGG - chr1_1:39644843-39644862 Msa0021870:CDS 40.0%
GAAAACTATAGAATTCGCGC+AGG - chr1_1:39644869-39644888 Msa0021870:CDS 40.0%
! ATCCTCCTTTTGTTCTCTCT+AGG - chr1_1:39645148-39645167 Msa0021870:intron 40.0%
! TCCTCCTTTTGTTCTCTCTA+GGG - chr1_1:39645149-39645168 Msa0021870:intron 40.0%
! TGGAGGGAGAAGAATGTTTT+TGG - chr1_1:39645444-39645463 Msa0021870:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG + chr1_1:39645517-39645536 None:intergenic 40.0%
! GGTGGATTTGATCCCTTAAA+CGG + chr1_1:39645518-39645537 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr1_1:39645536-39645555 None:intergenic 40.0%
TTCTAAATCTCATGCCCTTG+AGG + chr1_1:39645623-39645642 None:intergenic 40.0%
GAGATTTAGAAAAGGTGAGG+TGG - chr1_1:39645632-39645651 Msa0021870:intron 40.0%
!! TCAATGGGATTTTGATCCCA+AGG - chr1_1:39645733-39645752 Msa0021870:intron 40.0%
GTATGTTTAGATGAAGGCCT+AGG + chr1_1:39645831-39645850 None:intergenic 40.0%
GCCAATGATGTAAAGGACAA+TGG + chr1_1:39645952-39645971 None:intergenic 40.0%
TCTTGTGACTTTCACAATCG+GGG + chr1_1:39646332-39646351 None:intergenic 40.0%
CTCTTGTGACTTTCACAATC+GGG + chr1_1:39646333-39646352 None:intergenic 40.0%
!! TGGTGATTGATTGGTGGTTT+TGG + chr1_1:39646473-39646492 None:intergenic 40.0%
! TGGATTTAGGATCGTTGCAT+AGG + chr1_1:39646654-39646673 None:intergenic 40.0%
GATCATTGGATCAATCCAAC+TGG - chr1_1:39647011-39647030 Msa0021870:CDS 40.0%
TTGGATCAATCCAACTGGAT+CGG - chr1_1:39647016-39647035 Msa0021870:CDS 40.0%
CACGTGAGTAAAAAAAACGC+AGG - chr1_1:39647135-39647154 Msa0021870:CDS 40.0%
TTTCTTCTTCGAATCGGATC+CGG + chr1_1:39647328-39647347 None:intergenic 40.0%
CGAAATTACCTCTCTTTCGA+CGG - chr1_1:39647409-39647428 Msa0021870:CDS 40.0%
CTAGCACTAGTGTTCTTGTT+AGG - chr1_1:39642544-39642563 Msa0021870:CDS 40.0%
CATTCTCATTAGCTGCTACT+AGG - chr1_1:39642572-39642591 Msa0021870:CDS 40.0%
CCCAAGATTGAACTAAATCC+AGG - chr1_1:39642634-39642653 Msa0021870:CDS 40.0%
!!! GTGTCACATTTTTAGGTTGG+TGG + chr1_1:39642807-39642826 None:intergenic 40.0%
TTAGGACAGTACTATGGTCT+TGG - chr1_1:39642886-39642905 Msa0021870:intron 40.0%
! ACAGTACTATGGTCTTGGAT+CGG - chr1_1:39642891-39642910 Msa0021870:intron 40.0%
ACTTCTATACCATAAGGGTC+TGG + chr1_1:39642943-39642962 None:intergenic 40.0%
GACCCTTATGGTATAGAAGT+TGG - chr1_1:39642943-39642962 Msa0021870:CDS 40.0%
!!! TACCCTTTTGGAATTTCAGC+AGG + chr1_1:39642973-39642992 None:intergenic 40.0%
! CATTTCTCCACATACCCTTT+TGG + chr1_1:39642985-39643004 None:intergenic 40.0%
! CAAAAGGGTATGTGGAGAAA+TGG - chr1_1:39642983-39643002 Msa0021870:CDS 40.0%
ATGTTCATGCAATCGATACG+AGG - chr1_1:39643013-39643032 Msa0021870:CDS 40.0%
TGTTCATGCAATCGATACGA+GGG - chr1_1:39643014-39643033 Msa0021870:CDS 40.0%
GGATGTTAACTTTATGGTGC+CGG - chr1_1:39643239-39643258 Msa0021870:intron 40.0%
!! CTCACATTACTTTTGCTGCA+TGG + chr1_1:39643570-39643589 None:intergenic 40.0%
GGTTATGTCATCTATGGAGT+TGG - chr1_1:39643642-39643661 Msa0021870:intron 40.0%
CATCTACATACAGGTGCAAT+TGG - chr1_1:39643666-39643685 Msa0021870:intron 40.0%
TGGATCAACTCTATATGGAC+AGG - chr1_1:39643686-39643705 Msa0021870:intron 40.0%
GTGTAAATGTTAGGATGGGA+AGG - chr1_1:39643966-39643985 Msa0021870:intron 40.0%
TATGGAAATGGAAAGGAAGC+AGG - chr1_1:39644012-39644031 Msa0021870:intron 40.0%
AAGGAAGCAGGAAATGAGAA+AGG - chr1_1:39644024-39644043 Msa0021870:intron 40.0%
!! AGAAGACACTCTGGAGTAAT+GGG - chr1_1:39644144-39644163 Msa0021870:intron 40.0%
!!! GGGGCTTTTTTATTTCTTGG+TGG - chr1_1:39644164-39644183 Msa0021870:intron 40.0%
! GAATGTTAGACATGATGGTG+TGG + chr1_1:39644201-39644220 None:intergenic 40.0%
CAATACATCACGTGAAGGAT+TGG - chr1_1:39644729-39644748 Msa0021870:intron 40.0%
GACGGAAGAATGCTTGAAAA+AGG - chr1_1:39644843-39644862 Msa0021870:CDS 40.0%
GAAAACTATAGAATTCGCGC+AGG - chr1_1:39644869-39644888 Msa0021870:CDS 40.0%
! ATCCTCCTTTTGTTCTCTCT+AGG - chr1_1:39645148-39645167 Msa0021870:intron 40.0%
! TCCTCCTTTTGTTCTCTCTA+GGG - chr1_1:39645149-39645168 Msa0021870:intron 40.0%
! TGGAGGGAGAAGAATGTTTT+TGG - chr1_1:39645444-39645463 Msa0021870:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG + chr1_1:39645517-39645536 None:intergenic 40.0%
! GGTGGATTTGATCCCTTAAA+CGG + chr1_1:39645518-39645537 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr1_1:39645536-39645555 None:intergenic 40.0%
TTCTAAATCTCATGCCCTTG+AGG + chr1_1:39645623-39645642 None:intergenic 40.0%
GAGATTTAGAAAAGGTGAGG+TGG - chr1_1:39645632-39645651 Msa0021870:intron 40.0%
!! TCAATGGGATTTTGATCCCA+AGG - chr1_1:39645733-39645752 Msa0021870:intron 40.0%
GTATGTTTAGATGAAGGCCT+AGG + chr1_1:39645831-39645850 None:intergenic 40.0%
GCCAATGATGTAAAGGACAA+TGG + chr1_1:39645952-39645971 None:intergenic 40.0%
TCTTGTGACTTTCACAATCG+GGG + chr1_1:39646332-39646351 None:intergenic 40.0%
CTCTTGTGACTTTCACAATC+GGG + chr1_1:39646333-39646352 None:intergenic 40.0%
!! TGGTGATTGATTGGTGGTTT+TGG + chr1_1:39646473-39646492 None:intergenic 40.0%
! TGGATTTAGGATCGTTGCAT+AGG + chr1_1:39646654-39646673 None:intergenic 40.0%
GATCATTGGATCAATCCAAC+TGG - chr1_1:39647011-39647030 Msa0021870:CDS 40.0%
TTGGATCAATCCAACTGGAT+CGG - chr1_1:39647016-39647035 Msa0021870:CDS 40.0%
CACGTGAGTAAAAAAAACGC+AGG - chr1_1:39647135-39647154 Msa0021870:CDS 40.0%
TTTCTTCTTCGAATCGGATC+CGG + chr1_1:39647328-39647347 None:intergenic 40.0%
CGAAATTACCTCTCTTTCGA+CGG - chr1_1:39647409-39647428 Msa0021870:CDS 40.0%
!! CTGAGCTAGTTGATGATGCA+GGG - chr1_1:39642728-39642747 Msa0021870:CDS 45.0%
GTGACACCAAATAGCCAATC+AGG - chr1_1:39642820-39642839 Msa0021870:intron 45.0%
GTTCATGCAATCGATACGAG+GGG - chr1_1:39643015-39643034 Msa0021870:CDS 45.0%
AGCAAGTGCAAGATGAGGAA+AGG - chr1_1:39643159-39643178 Msa0021870:intron 45.0%
!! TAACTTTATGGTGCCGGTCA+AGG - chr1_1:39643245-39643264 Msa0021870:intron 45.0%
AGCTTCCCAATGCAAAATGG+AGG - chr1_1:39643621-39643640 Msa0021870:intron 45.0%
! GGAGTTGGTCATCTACATAC+AGG - chr1_1:39643657-39643676 Msa0021870:intron 45.0%
!! TCCACTTGTTATCCTCAACC+AGG - chr1_1:39644063-39644082 Msa0021870:intron 45.0%
ATCTTGATAGAGCCTGGTTG+AGG + chr1_1:39644078-39644097 None:intergenic 45.0%
!! CAGAAGACACTCTGGAGTAA+TGG - chr1_1:39644143-39644162 Msa0021870:intron 45.0%
!! GAAGACACTCTGGAGTAATG+GGG - chr1_1:39644145-39644164 Msa0021870:intron 45.0%
CTATAGAATTCGCGCAGGAA+AGG - chr1_1:39644874-39644893 Msa0021870:CDS 45.0%
GACAAGCATCAGAAGCTTCA+AGG - chr1_1:39645113-39645132 Msa0021870:intron 45.0%
CATCAGAAGCTTCAAGGAAG+AGG - chr1_1:39645119-39645138 Msa0021870:intron 45.0%
ACCCTAGAGAGAACAAAAGG+AGG + chr1_1:39645153-39645172 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG - chr1_1:39645268-39645287 Msa0021870:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG + chr1_1:39645360-39645379 None:intergenic 45.0%
TTGCCTACGTACCCGTTTAA+GGG - chr1_1:39645503-39645522 Msa0021870:intron 45.0%
ACATGCACACACACCACTTT+AGG + chr1_1:39645896-39645915 None:intergenic 45.0%
CATGGATCTCTTGCTTGCTT+AGG + chr1_1:39646268-39646287 None:intergenic 45.0%
! GATCCATGACGCTCACATTT+TGG - chr1_1:39646280-39646299 Msa0021870:intron 45.0%
ATGCCAAAATGTGAGCGTCA+TGG + chr1_1:39646286-39646305 None:intergenic 45.0%
! GCAATTGTGTCGGTGGATTT+AGG + chr1_1:39646667-39646686 None:intergenic 45.0%
TCTTGTTGCAATTGTGTCGG+TGG + chr1_1:39646674-39646693 None:intergenic 45.0%
! GTCTAGGGAGCATGGTAATA+TGG - chr1_1:39647062-39647081 Msa0021870:CDS 45.0%
! AGGGAGCATGGTAATATGGT+AGG - chr1_1:39647066-39647085 Msa0021870:CDS 45.0%
TGAGCACGCACAGGATAAAA+TGG - chr1_1:39647089-39647108 Msa0021870:CDS 45.0%
ACGCACAGGATAAAATGGCA+TGG - chr1_1:39647094-39647113 Msa0021870:CDS 45.0%
TTCCACGAAAATCACCGATC+CGG - chr1_1:39647306-39647325 Msa0021870:CDS 45.0%
AAGACGAAGCGGAAATTGTG+CGG + chr1_1:39647437-39647456 None:intergenic 45.0%
!! CTGAGCTAGTTGATGATGCA+GGG - chr1_1:39642728-39642747 Msa0021870:CDS 45.0%
GTGACACCAAATAGCCAATC+AGG - chr1_1:39642820-39642839 Msa0021870:intron 45.0%
GTTCATGCAATCGATACGAG+GGG - chr1_1:39643015-39643034 Msa0021870:CDS 45.0%
AGCAAGTGCAAGATGAGGAA+AGG - chr1_1:39643159-39643178 Msa0021870:intron 45.0%
!! TAACTTTATGGTGCCGGTCA+AGG - chr1_1:39643245-39643264 Msa0021870:intron 45.0%
AGCTTCCCAATGCAAAATGG+AGG - chr1_1:39643621-39643640 Msa0021870:intron 45.0%
! GGAGTTGGTCATCTACATAC+AGG - chr1_1:39643657-39643676 Msa0021870:intron 45.0%
!! TCCACTTGTTATCCTCAACC+AGG - chr1_1:39644063-39644082 Msa0021870:intron 45.0%
ATCTTGATAGAGCCTGGTTG+AGG + chr1_1:39644078-39644097 None:intergenic 45.0%
!! CAGAAGACACTCTGGAGTAA+TGG - chr1_1:39644143-39644162 Msa0021870:intron 45.0%
!! GAAGACACTCTGGAGTAATG+GGG - chr1_1:39644145-39644164 Msa0021870:intron 45.0%
CTATAGAATTCGCGCAGGAA+AGG - chr1_1:39644874-39644893 Msa0021870:CDS 45.0%
GACAAGCATCAGAAGCTTCA+AGG - chr1_1:39645113-39645132 Msa0021870:intron 45.0%
CATCAGAAGCTTCAAGGAAG+AGG - chr1_1:39645119-39645138 Msa0021870:intron 45.0%
ACCCTAGAGAGAACAAAAGG+AGG + chr1_1:39645153-39645172 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG - chr1_1:39645268-39645287 Msa0021870:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG + chr1_1:39645360-39645379 None:intergenic 45.0%
TTGCCTACGTACCCGTTTAA+GGG - chr1_1:39645503-39645522 Msa0021870:intron 45.0%
ACATGCACACACACCACTTT+AGG + chr1_1:39645896-39645915 None:intergenic 45.0%
CATGGATCTCTTGCTTGCTT+AGG + chr1_1:39646268-39646287 None:intergenic 45.0%
! GATCCATGACGCTCACATTT+TGG - chr1_1:39646280-39646299 Msa0021870:intron 45.0%
ATGCCAAAATGTGAGCGTCA+TGG + chr1_1:39646286-39646305 None:intergenic 45.0%
! GCAATTGTGTCGGTGGATTT+AGG + chr1_1:39646667-39646686 None:intergenic 45.0%
TCTTGTTGCAATTGTGTCGG+TGG + chr1_1:39646674-39646693 None:intergenic 45.0%
! GTCTAGGGAGCATGGTAATA+TGG - chr1_1:39647062-39647081 Msa0021870:CDS 45.0%
! AGGGAGCATGGTAATATGGT+AGG - chr1_1:39647066-39647085 Msa0021870:CDS 45.0%
TGAGCACGCACAGGATAAAA+TGG - chr1_1:39647089-39647108 Msa0021870:CDS 45.0%
ACGCACAGGATAAAATGGCA+TGG - chr1_1:39647094-39647113 Msa0021870:CDS 45.0%
TTCCACGAAAATCACCGATC+CGG - chr1_1:39647306-39647325 Msa0021870:CDS 45.0%
AAGACGAAGCGGAAATTGTG+CGG + chr1_1:39647437-39647456 None:intergenic 45.0%
!! CTGAGCTAGTTGATGATGCA+GGG - chr1_1:39642728-39642747 Msa0021870:CDS 45.0%
GTGACACCAAATAGCCAATC+AGG - chr1_1:39642820-39642839 Msa0021870:intron 45.0%
GTTCATGCAATCGATACGAG+GGG - chr1_1:39643015-39643034 Msa0021870:CDS 45.0%
AGCAAGTGCAAGATGAGGAA+AGG - chr1_1:39643159-39643178 Msa0021870:intron 45.0%
!! TAACTTTATGGTGCCGGTCA+AGG - chr1_1:39643245-39643264 Msa0021870:intron 45.0%
AGCTTCCCAATGCAAAATGG+AGG - chr1_1:39643621-39643640 Msa0021870:intron 45.0%
! GGAGTTGGTCATCTACATAC+AGG - chr1_1:39643657-39643676 Msa0021870:intron 45.0%
!! TCCACTTGTTATCCTCAACC+AGG - chr1_1:39644063-39644082 Msa0021870:intron 45.0%
ATCTTGATAGAGCCTGGTTG+AGG + chr1_1:39644078-39644097 None:intergenic 45.0%
!! CAGAAGACACTCTGGAGTAA+TGG - chr1_1:39644143-39644162 Msa0021870:intron 45.0%
!! GAAGACACTCTGGAGTAATG+GGG - chr1_1:39644145-39644164 Msa0021870:intron 45.0%
CTATAGAATTCGCGCAGGAA+AGG - chr1_1:39644874-39644893 Msa0021870:CDS 45.0%
GACAAGCATCAGAAGCTTCA+AGG - chr1_1:39645113-39645132 Msa0021870:intron 45.0%
CATCAGAAGCTTCAAGGAAG+AGG - chr1_1:39645119-39645138 Msa0021870:intron 45.0%
ACCCTAGAGAGAACAAAAGG+AGG + chr1_1:39645153-39645172 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG - chr1_1:39645268-39645287 Msa0021870:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG + chr1_1:39645360-39645379 None:intergenic 45.0%
TTGCCTACGTACCCGTTTAA+GGG - chr1_1:39645503-39645522 Msa0021870:intron 45.0%
ACATGCACACACACCACTTT+AGG + chr1_1:39645896-39645915 None:intergenic 45.0%
CATGGATCTCTTGCTTGCTT+AGG + chr1_1:39646268-39646287 None:intergenic 45.0%
! GATCCATGACGCTCACATTT+TGG - chr1_1:39646280-39646299 Msa0021870:intron 45.0%
ATGCCAAAATGTGAGCGTCA+TGG + chr1_1:39646286-39646305 None:intergenic 45.0%
! GCAATTGTGTCGGTGGATTT+AGG + chr1_1:39646667-39646686 None:intergenic 45.0%
TCTTGTTGCAATTGTGTCGG+TGG + chr1_1:39646674-39646693 None:intergenic 45.0%
! GTCTAGGGAGCATGGTAATA+TGG - chr1_1:39647062-39647081 Msa0021870:CDS 45.0%
! AGGGAGCATGGTAATATGGT+AGG - chr1_1:39647066-39647085 Msa0021870:CDS 45.0%
TGAGCACGCACAGGATAAAA+TGG - chr1_1:39647089-39647108 Msa0021870:CDS 45.0%
ACGCACAGGATAAAATGGCA+TGG - chr1_1:39647094-39647113 Msa0021870:CDS 45.0%
TTCCACGAAAATCACCGATC+CGG - chr1_1:39647306-39647325 Msa0021870:CDS 45.0%
AAGACGAAGCGGAAATTGTG+CGG + chr1_1:39647437-39647456 None:intergenic 45.0%
!! CTGAGCTAGTTGATGATGCA+GGG - chr1_1:39642728-39642747 Msa0021870:CDS 45.0%
GTGACACCAAATAGCCAATC+AGG - chr1_1:39642820-39642839 Msa0021870:intron 45.0%
GTTCATGCAATCGATACGAG+GGG - chr1_1:39643015-39643034 Msa0021870:CDS 45.0%
AGCAAGTGCAAGATGAGGAA+AGG - chr1_1:39643159-39643178 Msa0021870:intron 45.0%
!! TAACTTTATGGTGCCGGTCA+AGG - chr1_1:39643245-39643264 Msa0021870:intron 45.0%
AGCTTCCCAATGCAAAATGG+AGG - chr1_1:39643621-39643640 Msa0021870:intron 45.0%
! GGAGTTGGTCATCTACATAC+AGG - chr1_1:39643657-39643676 Msa0021870:intron 45.0%
!! TCCACTTGTTATCCTCAACC+AGG - chr1_1:39644063-39644082 Msa0021870:intron 45.0%
ATCTTGATAGAGCCTGGTTG+AGG + chr1_1:39644078-39644097 None:intergenic 45.0%
!! CAGAAGACACTCTGGAGTAA+TGG - chr1_1:39644143-39644162 Msa0021870:intron 45.0%
!! GAAGACACTCTGGAGTAATG+GGG - chr1_1:39644145-39644164 Msa0021870:intron 45.0%
CTATAGAATTCGCGCAGGAA+AGG - chr1_1:39644874-39644893 Msa0021870:CDS 45.0%
GACAAGCATCAGAAGCTTCA+AGG - chr1_1:39645113-39645132 Msa0021870:intron 45.0%
CATCAGAAGCTTCAAGGAAG+AGG - chr1_1:39645119-39645138 Msa0021870:intron 45.0%
ACCCTAGAGAGAACAAAAGG+AGG + chr1_1:39645153-39645172 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG - chr1_1:39645268-39645287 Msa0021870:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG + chr1_1:39645360-39645379 None:intergenic 45.0%
TTGCCTACGTACCCGTTTAA+GGG - chr1_1:39645503-39645522 Msa0021870:intron 45.0%
ACATGCACACACACCACTTT+AGG + chr1_1:39645896-39645915 None:intergenic 45.0%
CATGGATCTCTTGCTTGCTT+AGG + chr1_1:39646268-39646287 None:intergenic 45.0%
! GATCCATGACGCTCACATTT+TGG - chr1_1:39646280-39646299 Msa0021870:intron 45.0%
ATGCCAAAATGTGAGCGTCA+TGG + chr1_1:39646286-39646305 None:intergenic 45.0%
! GCAATTGTGTCGGTGGATTT+AGG + chr1_1:39646667-39646686 None:intergenic 45.0%
TCTTGTTGCAATTGTGTCGG+TGG + chr1_1:39646674-39646693 None:intergenic 45.0%
! GTCTAGGGAGCATGGTAATA+TGG - chr1_1:39647062-39647081 Msa0021870:CDS 45.0%
! AGGGAGCATGGTAATATGGT+AGG - chr1_1:39647066-39647085 Msa0021870:CDS 45.0%
TGAGCACGCACAGGATAAAA+TGG - chr1_1:39647089-39647108 Msa0021870:CDS 45.0%
ACGCACAGGATAAAATGGCA+TGG - chr1_1:39647094-39647113 Msa0021870:CDS 45.0%
TTCCACGAAAATCACCGATC+CGG - chr1_1:39647306-39647325 Msa0021870:CDS 45.0%
AAGACGAAGCGGAAATTGTG+CGG + chr1_1:39647437-39647456 None:intergenic 45.0%
!! CTGAGCTAGTTGATGATGCA+GGG - chr1_1:39642728-39642747 Msa0021870:CDS 45.0%
GTGACACCAAATAGCCAATC+AGG - chr1_1:39642820-39642839 Msa0021870:intron 45.0%
GTTCATGCAATCGATACGAG+GGG - chr1_1:39643015-39643034 Msa0021870:CDS 45.0%
AGCAAGTGCAAGATGAGGAA+AGG - chr1_1:39643159-39643178 Msa0021870:intron 45.0%
!! TAACTTTATGGTGCCGGTCA+AGG - chr1_1:39643245-39643264 Msa0021870:intron 45.0%
AGCTTCCCAATGCAAAATGG+AGG - chr1_1:39643621-39643640 Msa0021870:intron 45.0%
! GGAGTTGGTCATCTACATAC+AGG - chr1_1:39643657-39643676 Msa0021870:intron 45.0%
!! TCCACTTGTTATCCTCAACC+AGG - chr1_1:39644063-39644082 Msa0021870:intron 45.0%
ATCTTGATAGAGCCTGGTTG+AGG + chr1_1:39644078-39644097 None:intergenic 45.0%
!! CAGAAGACACTCTGGAGTAA+TGG - chr1_1:39644143-39644162 Msa0021870:intron 45.0%
!! GAAGACACTCTGGAGTAATG+GGG - chr1_1:39644145-39644164 Msa0021870:intron 45.0%
CTATAGAATTCGCGCAGGAA+AGG - chr1_1:39644874-39644893 Msa0021870:CDS 45.0%
GACAAGCATCAGAAGCTTCA+AGG - chr1_1:39645113-39645132 Msa0021870:intron 45.0%
CATCAGAAGCTTCAAGGAAG+AGG - chr1_1:39645119-39645138 Msa0021870:intron 45.0%
ACCCTAGAGAGAACAAAAGG+AGG + chr1_1:39645153-39645172 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG - chr1_1:39645268-39645287 Msa0021870:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG + chr1_1:39645360-39645379 None:intergenic 45.0%
TTGCCTACGTACCCGTTTAA+GGG - chr1_1:39645503-39645522 Msa0021870:intron 45.0%
ACATGCACACACACCACTTT+AGG + chr1_1:39645896-39645915 None:intergenic 45.0%
CATGGATCTCTTGCTTGCTT+AGG + chr1_1:39646268-39646287 None:intergenic 45.0%
! GATCCATGACGCTCACATTT+TGG - chr1_1:39646280-39646299 Msa0021870:intron 45.0%
ATGCCAAAATGTGAGCGTCA+TGG + chr1_1:39646286-39646305 None:intergenic 45.0%
! GCAATTGTGTCGGTGGATTT+AGG + chr1_1:39646667-39646686 None:intergenic 45.0%
TCTTGTTGCAATTGTGTCGG+TGG + chr1_1:39646674-39646693 None:intergenic 45.0%
! GTCTAGGGAGCATGGTAATA+TGG - chr1_1:39647062-39647081 Msa0021870:CDS 45.0%
! AGGGAGCATGGTAATATGGT+AGG - chr1_1:39647066-39647085 Msa0021870:CDS 45.0%
TGAGCACGCACAGGATAAAA+TGG - chr1_1:39647089-39647108 Msa0021870:CDS 45.0%
ACGCACAGGATAAAATGGCA+TGG - chr1_1:39647094-39647113 Msa0021870:CDS 45.0%
TTCCACGAAAATCACCGATC+CGG - chr1_1:39647306-39647325 Msa0021870:CDS 45.0%
AAGACGAAGCGGAAATTGTG+CGG + chr1_1:39647437-39647456 None:intergenic 45.0%
!! TTGAAAAAATAATTAAAATA+TGG - chr1_1:39644323-39644342 Msa0021870:intron 5.0%
!! TTGAAAAAATAATTAAAATA+TGG - chr1_1:39644323-39644342 Msa0021870:intron 5.0%
!! TTGAAAAAATAATTAAAATA+TGG - chr1_1:39644323-39644342 Msa0021870:intron 5.0%
!! TTGAAAAAATAATTAAAATA+TGG - chr1_1:39644323-39644342 Msa0021870:intron 5.0%
!! TTGAAAAAATAATTAAAATA+TGG - chr1_1:39644323-39644342 Msa0021870:intron 5.0%
!! GCTGAGCTAGTTGATGATGC+AGG - chr1_1:39642727-39642746 Msa0021870:CDS 50.0%
AGCACTCAATACATCCCACC+CGG + chr1_1:39643050-39643069 None:intergenic 50.0%
GCGAGCTTCCCAATGCAAAA+TGG - chr1_1:39643618-39643637 Msa0021870:intron 50.0%
GCCTGGTTGAGGATAACAAG+TGG + chr1_1:39644067-39644086 None:intergenic 50.0%
AACAGCAGCAGAAGACACTC+TGG - chr1_1:39644135-39644154 Msa0021870:intron 50.0%
ATGAGCCCTGCACATCAACA+CGG - chr1_1:39644942-39644961 Msa0021870:intron 50.0%
AACCCTTGAGAATCGAGGTC+CGG - chr1_1:39645273-39645292 Msa0021870:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr1_1:39645291-39645310 Msa0021870:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG - chr1_1:39645296-39645315 Msa0021870:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG - chr1_1:39645303-39645322 Msa0021870:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG + chr1_1:39645504-39645523 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG - chr1_1:39645502-39645521 Msa0021870:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG + chr1_1:39645509-39645528 None:intergenic 50.0%
AGAATGAGAGAGAGGCCTCA+AGG - chr1_1:39645605-39645624 Msa0021870:intron 50.0%
GAATGAGAGAGAGGCCTCAA+GGG - chr1_1:39645606-39645625 Msa0021870:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG - chr1_1:39645898-39645917 Msa0021870:CDS 50.0%
!! GAAGCTTTGAAGCAACGCAG+AGG - chr1_1:39646870-39646889 Msa0021870:CDS 50.0%
!! CCGTTTTTCCACCTTGGACT+GGG + chr1_1:39646973-39646992 None:intergenic 50.0%
CCCAGTCCAAGGTGGAAAAA+CGG - chr1_1:39646970-39646989 Msa0021870:CDS 50.0%
CCAGTCCAAGGTGGAAAAAC+GGG - chr1_1:39646971-39646990 Msa0021870:CDS 50.0%
CCAATGATCTCTGTGCATCC+TGG + chr1_1:39647000-39647019 None:intergenic 50.0%
CCAGGATGCACAGAGATCAT+TGG - chr1_1:39646997-39647016 Msa0021870:CDS 50.0%
GATCTTGGATCCGATCCAGT+TGG + chr1_1:39647029-39647048 None:intergenic 50.0%
TCCAAGATCCAACCATCGTG+AGG - chr1_1:39647040-39647059 Msa0021870:CDS 50.0%
ACCTCACGATGGTTGGATCT+TGG + chr1_1:39647044-39647063 None:intergenic 50.0%
ATCCAACCATCGTGAGGTCT+AGG - chr1_1:39647046-39647065 Msa0021870:CDS 50.0%
TCCAACCATCGTGAGGTCTA+GGG - chr1_1:39647047-39647066 Msa0021870:CDS 50.0%
GATCTTGAACTCCGACGTAG+TGG + chr1_1:39647247-39647266 None:intergenic 50.0%
! ATCCGGATCGGTGATTTTCG+TGG + chr1_1:39647311-39647330 None:intergenic 50.0%
TCTTCGAATCGGATCCGGAT+CGG + chr1_1:39647323-39647342 None:intergenic 50.0%
!! GCTGAGCTAGTTGATGATGC+AGG - chr1_1:39642727-39642746 Msa0021870:CDS 50.0%
AGCACTCAATACATCCCACC+CGG + chr1_1:39643050-39643069 None:intergenic 50.0%
GCGAGCTTCCCAATGCAAAA+TGG - chr1_1:39643618-39643637 Msa0021870:intron 50.0%
GCCTGGTTGAGGATAACAAG+TGG + chr1_1:39644067-39644086 None:intergenic 50.0%
AACAGCAGCAGAAGACACTC+TGG - chr1_1:39644135-39644154 Msa0021870:intron 50.0%
ATGAGCCCTGCACATCAACA+CGG - chr1_1:39644942-39644961 Msa0021870:intron 50.0%
AACCCTTGAGAATCGAGGTC+CGG - chr1_1:39645273-39645292 Msa0021870:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr1_1:39645291-39645310 Msa0021870:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG - chr1_1:39645296-39645315 Msa0021870:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG - chr1_1:39645303-39645322 Msa0021870:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG + chr1_1:39645504-39645523 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG - chr1_1:39645502-39645521 Msa0021870:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG + chr1_1:39645509-39645528 None:intergenic 50.0%
AGAATGAGAGAGAGGCCTCA+AGG - chr1_1:39645605-39645624 Msa0021870:intron 50.0%
GAATGAGAGAGAGGCCTCAA+GGG - chr1_1:39645606-39645625 Msa0021870:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG - chr1_1:39645898-39645917 Msa0021870:CDS 50.0%
!! GAAGCTTTGAAGCAACGCAG+AGG - chr1_1:39646870-39646889 Msa0021870:CDS 50.0%
!! CCGTTTTTCCACCTTGGACT+GGG + chr1_1:39646973-39646992 None:intergenic 50.0%
CCCAGTCCAAGGTGGAAAAA+CGG - chr1_1:39646970-39646989 Msa0021870:CDS 50.0%
CCAGTCCAAGGTGGAAAAAC+GGG - chr1_1:39646971-39646990 Msa0021870:CDS 50.0%
CCAATGATCTCTGTGCATCC+TGG + chr1_1:39647000-39647019 None:intergenic 50.0%
CCAGGATGCACAGAGATCAT+TGG - chr1_1:39646997-39647016 Msa0021870:CDS 50.0%
GATCTTGGATCCGATCCAGT+TGG + chr1_1:39647029-39647048 None:intergenic 50.0%
TCCAAGATCCAACCATCGTG+AGG - chr1_1:39647040-39647059 Msa0021870:CDS 50.0%
ACCTCACGATGGTTGGATCT+TGG + chr1_1:39647044-39647063 None:intergenic 50.0%
ATCCAACCATCGTGAGGTCT+AGG - chr1_1:39647046-39647065 Msa0021870:CDS 50.0%
TCCAACCATCGTGAGGTCTA+GGG - chr1_1:39647047-39647066 Msa0021870:CDS 50.0%
GATCTTGAACTCCGACGTAG+TGG + chr1_1:39647247-39647266 None:intergenic 50.0%
! ATCCGGATCGGTGATTTTCG+TGG + chr1_1:39647311-39647330 None:intergenic 50.0%
TCTTCGAATCGGATCCGGAT+CGG + chr1_1:39647323-39647342 None:intergenic 50.0%
!! GCTGAGCTAGTTGATGATGC+AGG - chr1_1:39642727-39642746 Msa0021870:CDS 50.0%
AGCACTCAATACATCCCACC+CGG + chr1_1:39643050-39643069 None:intergenic 50.0%
GCGAGCTTCCCAATGCAAAA+TGG - chr1_1:39643618-39643637 Msa0021870:intron 50.0%
GCCTGGTTGAGGATAACAAG+TGG + chr1_1:39644067-39644086 None:intergenic 50.0%
AACAGCAGCAGAAGACACTC+TGG - chr1_1:39644135-39644154 Msa0021870:intron 50.0%
ATGAGCCCTGCACATCAACA+CGG - chr1_1:39644942-39644961 Msa0021870:intron 50.0%
AACCCTTGAGAATCGAGGTC+CGG - chr1_1:39645273-39645292 Msa0021870:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr1_1:39645291-39645310 Msa0021870:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG - chr1_1:39645296-39645315 Msa0021870:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG - chr1_1:39645303-39645322 Msa0021870:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG + chr1_1:39645504-39645523 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG - chr1_1:39645502-39645521 Msa0021870:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG + chr1_1:39645509-39645528 None:intergenic 50.0%
AGAATGAGAGAGAGGCCTCA+AGG - chr1_1:39645605-39645624 Msa0021870:intron 50.0%
GAATGAGAGAGAGGCCTCAA+GGG - chr1_1:39645606-39645625 Msa0021870:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG - chr1_1:39645898-39645917 Msa0021870:CDS 50.0%
!! GAAGCTTTGAAGCAACGCAG+AGG - chr1_1:39646870-39646889 Msa0021870:CDS 50.0%
!! CCGTTTTTCCACCTTGGACT+GGG + chr1_1:39646973-39646992 None:intergenic 50.0%
CCCAGTCCAAGGTGGAAAAA+CGG - chr1_1:39646970-39646989 Msa0021870:CDS 50.0%
CCAGTCCAAGGTGGAAAAAC+GGG - chr1_1:39646971-39646990 Msa0021870:CDS 50.0%
CCAATGATCTCTGTGCATCC+TGG + chr1_1:39647000-39647019 None:intergenic 50.0%
CCAGGATGCACAGAGATCAT+TGG - chr1_1:39646997-39647016 Msa0021870:CDS 50.0%
GATCTTGGATCCGATCCAGT+TGG + chr1_1:39647029-39647048 None:intergenic 50.0%
TCCAAGATCCAACCATCGTG+AGG - chr1_1:39647040-39647059 Msa0021870:CDS 50.0%
ACCTCACGATGGTTGGATCT+TGG + chr1_1:39647044-39647063 None:intergenic 50.0%
ATCCAACCATCGTGAGGTCT+AGG - chr1_1:39647046-39647065 Msa0021870:CDS 50.0%
TCCAACCATCGTGAGGTCTA+GGG - chr1_1:39647047-39647066 Msa0021870:CDS 50.0%
GATCTTGAACTCCGACGTAG+TGG + chr1_1:39647247-39647266 None:intergenic 50.0%
! ATCCGGATCGGTGATTTTCG+TGG + chr1_1:39647311-39647330 None:intergenic 50.0%
TCTTCGAATCGGATCCGGAT+CGG + chr1_1:39647323-39647342 None:intergenic 50.0%
!! GCTGAGCTAGTTGATGATGC+AGG - chr1_1:39642727-39642746 Msa0021870:CDS 50.0%
AGCACTCAATACATCCCACC+CGG + chr1_1:39643050-39643069 None:intergenic 50.0%
GCGAGCTTCCCAATGCAAAA+TGG - chr1_1:39643618-39643637 Msa0021870:intron 50.0%
GCCTGGTTGAGGATAACAAG+TGG + chr1_1:39644067-39644086 None:intergenic 50.0%
AACAGCAGCAGAAGACACTC+TGG - chr1_1:39644135-39644154 Msa0021870:intron 50.0%
ATGAGCCCTGCACATCAACA+CGG - chr1_1:39644942-39644961 Msa0021870:intron 50.0%
AACCCTTGAGAATCGAGGTC+CGG - chr1_1:39645273-39645292 Msa0021870:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr1_1:39645291-39645310 Msa0021870:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG - chr1_1:39645296-39645315 Msa0021870:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG - chr1_1:39645303-39645322 Msa0021870:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG + chr1_1:39645504-39645523 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG - chr1_1:39645502-39645521 Msa0021870:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG + chr1_1:39645509-39645528 None:intergenic 50.0%
AGAATGAGAGAGAGGCCTCA+AGG - chr1_1:39645605-39645624 Msa0021870:intron 50.0%
GAATGAGAGAGAGGCCTCAA+GGG - chr1_1:39645606-39645625 Msa0021870:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG - chr1_1:39645898-39645917 Msa0021870:CDS 50.0%
!! GAAGCTTTGAAGCAACGCAG+AGG - chr1_1:39646870-39646889 Msa0021870:CDS 50.0%
!! CCGTTTTTCCACCTTGGACT+GGG + chr1_1:39646973-39646992 None:intergenic 50.0%
CCCAGTCCAAGGTGGAAAAA+CGG - chr1_1:39646970-39646989 Msa0021870:CDS 50.0%
CCAGTCCAAGGTGGAAAAAC+GGG - chr1_1:39646971-39646990 Msa0021870:CDS 50.0%
CCAATGATCTCTGTGCATCC+TGG + chr1_1:39647000-39647019 None:intergenic 50.0%
CCAGGATGCACAGAGATCAT+TGG - chr1_1:39646997-39647016 Msa0021870:CDS 50.0%
GATCTTGGATCCGATCCAGT+TGG + chr1_1:39647029-39647048 None:intergenic 50.0%
TCCAAGATCCAACCATCGTG+AGG - chr1_1:39647040-39647059 Msa0021870:CDS 50.0%
ACCTCACGATGGTTGGATCT+TGG + chr1_1:39647044-39647063 None:intergenic 50.0%
ATCCAACCATCGTGAGGTCT+AGG - chr1_1:39647046-39647065 Msa0021870:CDS 50.0%
TCCAACCATCGTGAGGTCTA+GGG - chr1_1:39647047-39647066 Msa0021870:CDS 50.0%
GATCTTGAACTCCGACGTAG+TGG + chr1_1:39647247-39647266 None:intergenic 50.0%
! ATCCGGATCGGTGATTTTCG+TGG + chr1_1:39647311-39647330 None:intergenic 50.0%
TCTTCGAATCGGATCCGGAT+CGG + chr1_1:39647323-39647342 None:intergenic 50.0%
!! GCTGAGCTAGTTGATGATGC+AGG - chr1_1:39642727-39642746 Msa0021870:CDS 50.0%
AGCACTCAATACATCCCACC+CGG + chr1_1:39643050-39643069 None:intergenic 50.0%
GCGAGCTTCCCAATGCAAAA+TGG - chr1_1:39643618-39643637 Msa0021870:intron 50.0%
GCCTGGTTGAGGATAACAAG+TGG + chr1_1:39644067-39644086 None:intergenic 50.0%
AACAGCAGCAGAAGACACTC+TGG - chr1_1:39644135-39644154 Msa0021870:intron 50.0%
ATGAGCCCTGCACATCAACA+CGG - chr1_1:39644942-39644961 Msa0021870:intron 50.0%
AACCCTTGAGAATCGAGGTC+CGG - chr1_1:39645273-39645292 Msa0021870:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr1_1:39645291-39645310 Msa0021870:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG - chr1_1:39645296-39645315 Msa0021870:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG - chr1_1:39645303-39645322 Msa0021870:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG + chr1_1:39645504-39645523 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG - chr1_1:39645502-39645521 Msa0021870:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG + chr1_1:39645509-39645528 None:intergenic 50.0%
AGAATGAGAGAGAGGCCTCA+AGG - chr1_1:39645605-39645624 Msa0021870:intron 50.0%
GAATGAGAGAGAGGCCTCAA+GGG - chr1_1:39645606-39645625 Msa0021870:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG - chr1_1:39645898-39645917 Msa0021870:CDS 50.0%
!! GAAGCTTTGAAGCAACGCAG+AGG - chr1_1:39646870-39646889 Msa0021870:CDS 50.0%
!! CCGTTTTTCCACCTTGGACT+GGG + chr1_1:39646973-39646992 None:intergenic 50.0%
CCCAGTCCAAGGTGGAAAAA+CGG - chr1_1:39646970-39646989 Msa0021870:CDS 50.0%
CCAGTCCAAGGTGGAAAAAC+GGG - chr1_1:39646971-39646990 Msa0021870:CDS 50.0%
CCAATGATCTCTGTGCATCC+TGG + chr1_1:39647000-39647019 None:intergenic 50.0%
CCAGGATGCACAGAGATCAT+TGG - chr1_1:39646997-39647016 Msa0021870:CDS 50.0%
GATCTTGGATCCGATCCAGT+TGG + chr1_1:39647029-39647048 None:intergenic 50.0%
TCCAAGATCCAACCATCGTG+AGG - chr1_1:39647040-39647059 Msa0021870:CDS 50.0%
ACCTCACGATGGTTGGATCT+TGG + chr1_1:39647044-39647063 None:intergenic 50.0%
ATCCAACCATCGTGAGGTCT+AGG - chr1_1:39647046-39647065 Msa0021870:CDS 50.0%
TCCAACCATCGTGAGGTCTA+GGG - chr1_1:39647047-39647066 Msa0021870:CDS 50.0%
GATCTTGAACTCCGACGTAG+TGG + chr1_1:39647247-39647266 None:intergenic 50.0%
! ATCCGGATCGGTGATTTTCG+TGG + chr1_1:39647311-39647330 None:intergenic 50.0%
TCTTCGAATCGGATCCGGAT+CGG + chr1_1:39647323-39647342 None:intergenic 50.0%
TGCAATCGATACGAGGGGTG+TGG - chr1_1:39643020-39643039 Msa0021870:CDS 55.0%
! ATACGAGGGGTGTGGATGAC+CGG - chr1_1:39643028-39643047 Msa0021870:intron 55.0%
GAATGGTGTCTCATGCGCAG+GGG + chr1_1:39644911-39644930 None:intergenic 55.0%
GGAATGGTGTCTCATGCGCA+GGG + chr1_1:39644912-39644931 None:intergenic 55.0%
TGGAATGGTGTCTCATGCGC+AGG + chr1_1:39644913-39644932 None:intergenic 55.0%
GCTCATGAGGCAGCATGGAA+TGG + chr1_1:39644928-39644947 None:intergenic 55.0%
GTTGATGTGCAGGGCTCATG+AGG + chr1_1:39644941-39644960 None:intergenic 55.0%
TGAGCCCTGCACATCAACAC+GGG - chr1_1:39644943-39644962 Msa0021870:intron 55.0%
! CCTACCCGTGTTGATGTGCA+GGG + chr1_1:39644950-39644969 None:intergenic 55.0%
! TCCTACCCGTGTTGATGTGC+AGG + chr1_1:39644951-39644970 None:intergenic 55.0%
TGCACATCAACACGGGTAGG+AGG - chr1_1:39644950-39644969 Msa0021870:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG - chr1_1:39645274-39645293 Msa0021870:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG + chr1_1:39645278-39645297 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr1_1:39645295-39645314 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr1_1:39645292-39645311 Msa0021870:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr1_1:39645910-39645929 Msa0021870:CDS 55.0%
! TTCCACCTTGGACTGGGCTT+GGG + chr1_1:39646967-39646986 None:intergenic 55.0%
! TTTCCACCTTGGACTGGGCT+TGG + chr1_1:39646968-39646987 None:intergenic 55.0%
!! CCCGTTTTTCCACCTTGGAC+TGG + chr1_1:39646974-39646993 None:intergenic 55.0%
!! GGTGACCCGTTTTTCCACCT+TGG + chr1_1:39646979-39646998 None:intergenic 55.0%
AGGTGGAAAAACGGGTCACC+AGG - chr1_1:39646979-39646998 Msa0021870:CDS 55.0%
TCCCTAGACCTCACGATGGT+TGG + chr1_1:39647051-39647070 None:intergenic 55.0%
ATGCTCCCTAGACCTCACGA+TGG + chr1_1:39647055-39647074 None:intergenic 55.0%
ATCGTGAGGTCTAGGGAGCA+TGG - chr1_1:39647054-39647073 Msa0021870:CDS 55.0%
TATGGTAGGTGAGCACGCAC+AGG - chr1_1:39647080-39647099 Msa0021870:CDS 55.0%
! TTCCGGTGAGCTTGTTCCTC+CGG - chr1_1:39647201-39647220 Msa0021870:CDS 55.0%
! CGACGTAGTGGTGACGTTTC+CGG + chr1_1:39647235-39647254 None:intergenic 55.0%
CGGAAACGTCACCACTACGT+CGG - chr1_1:39647233-39647252 Msa0021870:CDS 55.0%
TGCAATCGATACGAGGGGTG+TGG - chr1_1:39643020-39643039 Msa0021870:CDS 55.0%
! ATACGAGGGGTGTGGATGAC+CGG - chr1_1:39643028-39643047 Msa0021870:intron 55.0%
GAATGGTGTCTCATGCGCAG+GGG + chr1_1:39644911-39644930 None:intergenic 55.0%
GGAATGGTGTCTCATGCGCA+GGG + chr1_1:39644912-39644931 None:intergenic 55.0%
TGGAATGGTGTCTCATGCGC+AGG + chr1_1:39644913-39644932 None:intergenic 55.0%
GCTCATGAGGCAGCATGGAA+TGG + chr1_1:39644928-39644947 None:intergenic 55.0%
GTTGATGTGCAGGGCTCATG+AGG + chr1_1:39644941-39644960 None:intergenic 55.0%
TGAGCCCTGCACATCAACAC+GGG - chr1_1:39644943-39644962 Msa0021870:intron 55.0%
! CCTACCCGTGTTGATGTGCA+GGG + chr1_1:39644950-39644969 None:intergenic 55.0%
! TCCTACCCGTGTTGATGTGC+AGG + chr1_1:39644951-39644970 None:intergenic 55.0%
TGCACATCAACACGGGTAGG+AGG - chr1_1:39644950-39644969 Msa0021870:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG - chr1_1:39645274-39645293 Msa0021870:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG + chr1_1:39645278-39645297 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr1_1:39645295-39645314 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr1_1:39645292-39645311 Msa0021870:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr1_1:39645910-39645929 Msa0021870:CDS 55.0%
! TTCCACCTTGGACTGGGCTT+GGG + chr1_1:39646967-39646986 None:intergenic 55.0%
! TTTCCACCTTGGACTGGGCT+TGG + chr1_1:39646968-39646987 None:intergenic 55.0%
!! CCCGTTTTTCCACCTTGGAC+TGG + chr1_1:39646974-39646993 None:intergenic 55.0%
!! GGTGACCCGTTTTTCCACCT+TGG + chr1_1:39646979-39646998 None:intergenic 55.0%
AGGTGGAAAAACGGGTCACC+AGG - chr1_1:39646979-39646998 Msa0021870:CDS 55.0%
TCCCTAGACCTCACGATGGT+TGG + chr1_1:39647051-39647070 None:intergenic 55.0%
ATGCTCCCTAGACCTCACGA+TGG + chr1_1:39647055-39647074 None:intergenic 55.0%
ATCGTGAGGTCTAGGGAGCA+TGG - chr1_1:39647054-39647073 Msa0021870:CDS 55.0%
TATGGTAGGTGAGCACGCAC+AGG - chr1_1:39647080-39647099 Msa0021870:CDS 55.0%
! TTCCGGTGAGCTTGTTCCTC+CGG - chr1_1:39647201-39647220 Msa0021870:CDS 55.0%
! CGACGTAGTGGTGACGTTTC+CGG + chr1_1:39647235-39647254 None:intergenic 55.0%
CGGAAACGTCACCACTACGT+CGG - chr1_1:39647233-39647252 Msa0021870:CDS 55.0%
TGCAATCGATACGAGGGGTG+TGG - chr1_1:39643020-39643039 Msa0021870:CDS 55.0%
! ATACGAGGGGTGTGGATGAC+CGG - chr1_1:39643028-39643047 Msa0021870:intron 55.0%
GAATGGTGTCTCATGCGCAG+GGG + chr1_1:39644911-39644930 None:intergenic 55.0%
GGAATGGTGTCTCATGCGCA+GGG + chr1_1:39644912-39644931 None:intergenic 55.0%
TGGAATGGTGTCTCATGCGC+AGG + chr1_1:39644913-39644932 None:intergenic 55.0%
GCTCATGAGGCAGCATGGAA+TGG + chr1_1:39644928-39644947 None:intergenic 55.0%
GTTGATGTGCAGGGCTCATG+AGG + chr1_1:39644941-39644960 None:intergenic 55.0%
TGAGCCCTGCACATCAACAC+GGG - chr1_1:39644943-39644962 Msa0021870:intron 55.0%
! CCTACCCGTGTTGATGTGCA+GGG + chr1_1:39644950-39644969 None:intergenic 55.0%
! TCCTACCCGTGTTGATGTGC+AGG + chr1_1:39644951-39644970 None:intergenic 55.0%
TGCACATCAACACGGGTAGG+AGG - chr1_1:39644950-39644969 Msa0021870:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG - chr1_1:39645274-39645293 Msa0021870:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG + chr1_1:39645278-39645297 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr1_1:39645295-39645314 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr1_1:39645292-39645311 Msa0021870:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr1_1:39645910-39645929 Msa0021870:CDS 55.0%
! TTCCACCTTGGACTGGGCTT+GGG + chr1_1:39646967-39646986 None:intergenic 55.0%
! TTTCCACCTTGGACTGGGCT+TGG + chr1_1:39646968-39646987 None:intergenic 55.0%
!! CCCGTTTTTCCACCTTGGAC+TGG + chr1_1:39646974-39646993 None:intergenic 55.0%
!! GGTGACCCGTTTTTCCACCT+TGG + chr1_1:39646979-39646998 None:intergenic 55.0%
AGGTGGAAAAACGGGTCACC+AGG - chr1_1:39646979-39646998 Msa0021870:CDS 55.0%
TCCCTAGACCTCACGATGGT+TGG + chr1_1:39647051-39647070 None:intergenic 55.0%
ATGCTCCCTAGACCTCACGA+TGG + chr1_1:39647055-39647074 None:intergenic 55.0%
ATCGTGAGGTCTAGGGAGCA+TGG - chr1_1:39647054-39647073 Msa0021870:CDS 55.0%
TATGGTAGGTGAGCACGCAC+AGG - chr1_1:39647080-39647099 Msa0021870:CDS 55.0%
! TTCCGGTGAGCTTGTTCCTC+CGG - chr1_1:39647201-39647220 Msa0021870:CDS 55.0%
! CGACGTAGTGGTGACGTTTC+CGG + chr1_1:39647235-39647254 None:intergenic 55.0%
CGGAAACGTCACCACTACGT+CGG - chr1_1:39647233-39647252 Msa0021870:CDS 55.0%
TGCAATCGATACGAGGGGTG+TGG - chr1_1:39643020-39643039 Msa0021870:CDS 55.0%
! ATACGAGGGGTGTGGATGAC+CGG - chr1_1:39643028-39643047 Msa0021870:intron 55.0%
GAATGGTGTCTCATGCGCAG+GGG + chr1_1:39644911-39644930 None:intergenic 55.0%
GGAATGGTGTCTCATGCGCA+GGG + chr1_1:39644912-39644931 None:intergenic 55.0%
TGGAATGGTGTCTCATGCGC+AGG + chr1_1:39644913-39644932 None:intergenic 55.0%
GCTCATGAGGCAGCATGGAA+TGG + chr1_1:39644928-39644947 None:intergenic 55.0%
GTTGATGTGCAGGGCTCATG+AGG + chr1_1:39644941-39644960 None:intergenic 55.0%
TGAGCCCTGCACATCAACAC+GGG - chr1_1:39644943-39644962 Msa0021870:intron 55.0%
! CCTACCCGTGTTGATGTGCA+GGG + chr1_1:39644950-39644969 None:intergenic 55.0%
! TCCTACCCGTGTTGATGTGC+AGG + chr1_1:39644951-39644970 None:intergenic 55.0%
TGCACATCAACACGGGTAGG+AGG - chr1_1:39644950-39644969 Msa0021870:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG - chr1_1:39645274-39645293 Msa0021870:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG + chr1_1:39645278-39645297 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr1_1:39645295-39645314 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr1_1:39645292-39645311 Msa0021870:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr1_1:39645910-39645929 Msa0021870:CDS 55.0%
! TTCCACCTTGGACTGGGCTT+GGG + chr1_1:39646967-39646986 None:intergenic 55.0%
! TTTCCACCTTGGACTGGGCT+TGG + chr1_1:39646968-39646987 None:intergenic 55.0%
!! CCCGTTTTTCCACCTTGGAC+TGG + chr1_1:39646974-39646993 None:intergenic 55.0%
!! GGTGACCCGTTTTTCCACCT+TGG + chr1_1:39646979-39646998 None:intergenic 55.0%
AGGTGGAAAAACGGGTCACC+AGG - chr1_1:39646979-39646998 Msa0021870:CDS 55.0%
TCCCTAGACCTCACGATGGT+TGG + chr1_1:39647051-39647070 None:intergenic 55.0%
ATGCTCCCTAGACCTCACGA+TGG + chr1_1:39647055-39647074 None:intergenic 55.0%
ATCGTGAGGTCTAGGGAGCA+TGG - chr1_1:39647054-39647073 Msa0021870:CDS 55.0%
TATGGTAGGTGAGCACGCAC+AGG - chr1_1:39647080-39647099 Msa0021870:CDS 55.0%
! TTCCGGTGAGCTTGTTCCTC+CGG - chr1_1:39647201-39647220 Msa0021870:CDS 55.0%
! CGACGTAGTGGTGACGTTTC+CGG + chr1_1:39647235-39647254 None:intergenic 55.0%
CGGAAACGTCACCACTACGT+CGG - chr1_1:39647233-39647252 Msa0021870:CDS 55.0%
TGCAATCGATACGAGGGGTG+TGG - chr1_1:39643020-39643039 Msa0021870:CDS 55.0%
! ATACGAGGGGTGTGGATGAC+CGG - chr1_1:39643028-39643047 Msa0021870:intron 55.0%
GAATGGTGTCTCATGCGCAG+GGG + chr1_1:39644911-39644930 None:intergenic 55.0%
GGAATGGTGTCTCATGCGCA+GGG + chr1_1:39644912-39644931 None:intergenic 55.0%
TGGAATGGTGTCTCATGCGC+AGG + chr1_1:39644913-39644932 None:intergenic 55.0%
GCTCATGAGGCAGCATGGAA+TGG + chr1_1:39644928-39644947 None:intergenic 55.0%
GTTGATGTGCAGGGCTCATG+AGG + chr1_1:39644941-39644960 None:intergenic 55.0%
TGAGCCCTGCACATCAACAC+GGG - chr1_1:39644943-39644962 Msa0021870:intron 55.0%
! CCTACCCGTGTTGATGTGCA+GGG + chr1_1:39644950-39644969 None:intergenic 55.0%
! TCCTACCCGTGTTGATGTGC+AGG + chr1_1:39644951-39644970 None:intergenic 55.0%
TGCACATCAACACGGGTAGG+AGG - chr1_1:39644950-39644969 Msa0021870:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG - chr1_1:39645274-39645293 Msa0021870:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG + chr1_1:39645278-39645297 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr1_1:39645295-39645314 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr1_1:39645292-39645311 Msa0021870:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr1_1:39645910-39645929 Msa0021870:CDS 55.0%
! TTCCACCTTGGACTGGGCTT+GGG + chr1_1:39646967-39646986 None:intergenic 55.0%
! TTTCCACCTTGGACTGGGCT+TGG + chr1_1:39646968-39646987 None:intergenic 55.0%
!! CCCGTTTTTCCACCTTGGAC+TGG + chr1_1:39646974-39646993 None:intergenic 55.0%
!! GGTGACCCGTTTTTCCACCT+TGG + chr1_1:39646979-39646998 None:intergenic 55.0%
AGGTGGAAAAACGGGTCACC+AGG - chr1_1:39646979-39646998 Msa0021870:CDS 55.0%
TCCCTAGACCTCACGATGGT+TGG + chr1_1:39647051-39647070 None:intergenic 55.0%
ATGCTCCCTAGACCTCACGA+TGG + chr1_1:39647055-39647074 None:intergenic 55.0%
ATCGTGAGGTCTAGGGAGCA+TGG - chr1_1:39647054-39647073 Msa0021870:CDS 55.0%
TATGGTAGGTGAGCACGCAC+AGG - chr1_1:39647080-39647099 Msa0021870:CDS 55.0%
! TTCCGGTGAGCTTGTTCCTC+CGG - chr1_1:39647201-39647220 Msa0021870:CDS 55.0%
! CGACGTAGTGGTGACGTTTC+CGG + chr1_1:39647235-39647254 None:intergenic 55.0%
CGGAAACGTCACCACTACGT+CGG - chr1_1:39647233-39647252 Msa0021870:CDS 55.0%
! TACGAGGGGTGTGGATGACC+GGG - chr1_1:39643029-39643048 Msa0021870:intron 60.0%
! CGGAGTACTCGTGCAACGCA+CGG - chr1_1:39644488-39644507 Msa0021870:intron 60.0%
! GGAGTACTCGTGCAACGCAC+GGG - chr1_1:39644489-39644508 Msa0021870:intron 60.0%
GTGCAACGCACGGGTGATGA+TGG - chr1_1:39644498-39644517 Msa0021870:intron 60.0%
CCCTGCACATCAACACGGGT+AGG - chr1_1:39644947-39644966 Msa0021870:intron 60.0%
CTCCCGGACCTCGATTCTCA+AGG + chr1_1:39645279-39645298 None:intergenic 60.0%
TAAGGCCCAAGCCCAGTCCA+AGG - chr1_1:39646959-39646978 Msa0021870:CDS 60.0%
! TACGAGGGGTGTGGATGACC+GGG - chr1_1:39643029-39643048 Msa0021870:intron 60.0%
! CGGAGTACTCGTGCAACGCA+CGG - chr1_1:39644488-39644507 Msa0021870:intron 60.0%
! GGAGTACTCGTGCAACGCAC+GGG - chr1_1:39644489-39644508 Msa0021870:intron 60.0%
GTGCAACGCACGGGTGATGA+TGG - chr1_1:39644498-39644517 Msa0021870:intron 60.0%
CCCTGCACATCAACACGGGT+AGG - chr1_1:39644947-39644966 Msa0021870:intron 60.0%
CTCCCGGACCTCGATTCTCA+AGG + chr1_1:39645279-39645298 None:intergenic 60.0%
TAAGGCCCAAGCCCAGTCCA+AGG - chr1_1:39646959-39646978 Msa0021870:CDS 60.0%
! TACGAGGGGTGTGGATGACC+GGG - chr1_1:39643029-39643048 Msa0021870:intron 60.0%
! CGGAGTACTCGTGCAACGCA+CGG - chr1_1:39644488-39644507 Msa0021870:intron 60.0%
! GGAGTACTCGTGCAACGCAC+GGG - chr1_1:39644489-39644508 Msa0021870:intron 60.0%
GTGCAACGCACGGGTGATGA+TGG - chr1_1:39644498-39644517 Msa0021870:intron 60.0%
CCCTGCACATCAACACGGGT+AGG - chr1_1:39644947-39644966 Msa0021870:intron 60.0%
CTCCCGGACCTCGATTCTCA+AGG + chr1_1:39645279-39645298 None:intergenic 60.0%
TAAGGCCCAAGCCCAGTCCA+AGG - chr1_1:39646959-39646978 Msa0021870:CDS 60.0%
! TACGAGGGGTGTGGATGACC+GGG - chr1_1:39643029-39643048 Msa0021870:intron 60.0%
! CGGAGTACTCGTGCAACGCA+CGG - chr1_1:39644488-39644507 Msa0021870:intron 60.0%
! GGAGTACTCGTGCAACGCAC+GGG - chr1_1:39644489-39644508 Msa0021870:intron 60.0%
GTGCAACGCACGGGTGATGA+TGG - chr1_1:39644498-39644517 Msa0021870:intron 60.0%
CCCTGCACATCAACACGGGT+AGG - chr1_1:39644947-39644966 Msa0021870:intron 60.0%
CTCCCGGACCTCGATTCTCA+AGG + chr1_1:39645279-39645298 None:intergenic 60.0%
TAAGGCCCAAGCCCAGTCCA+AGG - chr1_1:39646959-39646978 Msa0021870:CDS 60.0%
! TACGAGGGGTGTGGATGACC+GGG - chr1_1:39643029-39643048 Msa0021870:intron 60.0%
! CGGAGTACTCGTGCAACGCA+CGG - chr1_1:39644488-39644507 Msa0021870:intron 60.0%
! GGAGTACTCGTGCAACGCAC+GGG - chr1_1:39644489-39644508 Msa0021870:intron 60.0%
GTGCAACGCACGGGTGATGA+TGG - chr1_1:39644498-39644517 Msa0021870:intron 60.0%
CCCTGCACATCAACACGGGT+AGG - chr1_1:39644947-39644966 Msa0021870:intron 60.0%
CTCCCGGACCTCGATTCTCA+AGG + chr1_1:39645279-39645298 None:intergenic 60.0%
TAAGGCCCAAGCCCAGTCCA+AGG - chr1_1:39646959-39646978 Msa0021870:CDS 60.0%
! AGGGGTGTGGATGACCGGGT+GGG - chr1_1:39643033-39643052 Msa0021870:intron 65.0%
GCAGGGCTCATGAGGCAGCA+TGG + chr1_1:39644933-39644952 None:intergenic 65.0%
CGCCGGAGGAACAAGCTCAC+CGG + chr1_1:39647206-39647225 None:intergenic 65.0%
! GTGAGCTTGTTCCTCCGGCG+TGG - chr1_1:39647206-39647225 Msa0021870:CDS 65.0%
! AGCTTGTTCCTCCGGCGTGG+TGG - chr1_1:39647209-39647228 Msa0021870:CDS 65.0%
GTGCGGCACCGTCGAAAGAG+AGG + chr1_1:39647420-39647439 None:intergenic 65.0%
! AGGGGTGTGGATGACCGGGT+GGG - chr1_1:39643033-39643052 Msa0021870:intron 65.0%
GCAGGGCTCATGAGGCAGCA+TGG + chr1_1:39644933-39644952 None:intergenic 65.0%
CGCCGGAGGAACAAGCTCAC+CGG + chr1_1:39647206-39647225 None:intergenic 65.0%
! GTGAGCTTGTTCCTCCGGCG+TGG - chr1_1:39647206-39647225 Msa0021870:CDS 65.0%
! AGCTTGTTCCTCCGGCGTGG+TGG - chr1_1:39647209-39647228 Msa0021870:CDS 65.0%
GTGCGGCACCGTCGAAAGAG+AGG + chr1_1:39647420-39647439 None:intergenic 65.0%
! AGGGGTGTGGATGACCGGGT+GGG - chr1_1:39643033-39643052 Msa0021870:intron 65.0%
GCAGGGCTCATGAGGCAGCA+TGG + chr1_1:39644933-39644952 None:intergenic 65.0%
CGCCGGAGGAACAAGCTCAC+CGG + chr1_1:39647206-39647225 None:intergenic 65.0%
! GTGAGCTTGTTCCTCCGGCG+TGG - chr1_1:39647206-39647225 Msa0021870:CDS 65.0%
! AGCTTGTTCCTCCGGCGTGG+TGG - chr1_1:39647209-39647228 Msa0021870:CDS 65.0%
GTGCGGCACCGTCGAAAGAG+AGG + chr1_1:39647420-39647439 None:intergenic 65.0%
! AGGGGTGTGGATGACCGGGT+GGG - chr1_1:39643033-39643052 Msa0021870:intron 65.0%
GCAGGGCTCATGAGGCAGCA+TGG + chr1_1:39644933-39644952 None:intergenic 65.0%
CGCCGGAGGAACAAGCTCAC+CGG + chr1_1:39647206-39647225 None:intergenic 65.0%
! GTGAGCTTGTTCCTCCGGCG+TGG - chr1_1:39647206-39647225 Msa0021870:CDS 65.0%
! AGCTTGTTCCTCCGGCGTGG+TGG - chr1_1:39647209-39647228 Msa0021870:CDS 65.0%
GTGCGGCACCGTCGAAAGAG+AGG + chr1_1:39647420-39647439 None:intergenic 65.0%
! AGGGGTGTGGATGACCGGGT+GGG - chr1_1:39643033-39643052 Msa0021870:intron 65.0%
GCAGGGCTCATGAGGCAGCA+TGG + chr1_1:39644933-39644952 None:intergenic 65.0%
CGCCGGAGGAACAAGCTCAC+CGG + chr1_1:39647206-39647225 None:intergenic 65.0%
! GTGAGCTTGTTCCTCCGGCG+TGG - chr1_1:39647206-39647225 Msa0021870:CDS 65.0%
! AGCTTGTTCCTCCGGCGTGG+TGG - chr1_1:39647209-39647228 Msa0021870:CDS 65.0%
GTGCGGCACCGTCGAAAGAG+AGG + chr1_1:39647420-39647439 None:intergenic 65.0%
! GAGGGGTGTGGATGACCGGG+TGG - chr1_1:39643032-39643051 Msa0021870:intron 70.0%
GGCCCAAGCCCAGTCCAAGG+TGG - chr1_1:39646962-39646981 Msa0021870:CDS 70.0%
TGTTCCTCCGGCGTGGTGGC+CGG - chr1_1:39647213-39647232 Msa0021870:CDS 70.0%
GACGTTTCCGGCCACCACGC+CGG + chr1_1:39647223-39647242 None:intergenic 70.0%
! GAGGGGTGTGGATGACCGGG+TGG - chr1_1:39643032-39643051 Msa0021870:intron 70.0%
GGCCCAAGCCCAGTCCAAGG+TGG - chr1_1:39646962-39646981 Msa0021870:CDS 70.0%
TGTTCCTCCGGCGTGGTGGC+CGG - chr1_1:39647213-39647232 Msa0021870:CDS 70.0%
GACGTTTCCGGCCACCACGC+CGG + chr1_1:39647223-39647242 None:intergenic 70.0%
! GAGGGGTGTGGATGACCGGG+TGG - chr1_1:39643032-39643051 Msa0021870:intron 70.0%
GGCCCAAGCCCAGTCCAAGG+TGG - chr1_1:39646962-39646981 Msa0021870:CDS 70.0%
TGTTCCTCCGGCGTGGTGGC+CGG - chr1_1:39647213-39647232 Msa0021870:CDS 70.0%
GACGTTTCCGGCCACCACGC+CGG + chr1_1:39647223-39647242 None:intergenic 70.0%
! GAGGGGTGTGGATGACCGGG+TGG - chr1_1:39643032-39643051 Msa0021870:intron 70.0%
GGCCCAAGCCCAGTCCAAGG+TGG - chr1_1:39646962-39646981 Msa0021870:CDS 70.0%
TGTTCCTCCGGCGTGGTGGC+CGG - chr1_1:39647213-39647232 Msa0021870:CDS 70.0%
GACGTTTCCGGCCACCACGC+CGG + chr1_1:39647223-39647242 None:intergenic 70.0%
! GAGGGGTGTGGATGACCGGG+TGG - chr1_1:39643032-39643051 Msa0021870:intron 70.0%
GGCCCAAGCCCAGTCCAAGG+TGG - chr1_1:39646962-39646981 Msa0021870:CDS 70.0%
TGTTCCTCCGGCGTGGTGGC+CGG - chr1_1:39647213-39647232 Msa0021870:CDS 70.0%
GACGTTTCCGGCCACCACGC+CGG + chr1_1:39647223-39647242 None:intergenic 70.0%
GTTTCCGGCCACCACGCCGG+AGG + chr1_1:39647220-39647239 None:intergenic 75.0%
GTTTCCGGCCACCACGCCGG+AGG + chr1_1:39647220-39647239 None:intergenic 75.0%
GTTTCCGGCCACCACGCCGG+AGG + chr1_1:39647220-39647239 None:intergenic 75.0%
GTTTCCGGCCACCACGCCGG+AGG + chr1_1:39647220-39647239 None:intergenic 75.0%
GTTTCCGGCCACCACGCCGG+AGG + chr1_1:39647220-39647239 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 39642502 39647502 39642502 ID=Msa0021870;Name=Msa0021870
chr1_1 mRNA 39642502 39647502 39642502 ID=Msa0021870-mRNA-1;Parent=Msa0021870;Name=Msa0021870-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.33|1|1|6|0|553
chr1_1 exon 39646660 39647502 39646660 ID=Msa0021870-mRNA-1:exon:12097;Parent=Msa0021870-mRNA-1
chr1_1 exon 39646297 39646455 39646297 ID=Msa0021870-mRNA-1:exon:12096;Parent=Msa0021870-mRNA-1
chr1_1 exon 39645879 39646025 39645879 ID=Msa0021870-mRNA-1:exon:12095;Parent=Msa0021870-mRNA-1
chr1_1 exon 39644834 39644914 39644834 ID=Msa0021870-mRNA-1:exon:12094;Parent=Msa0021870-mRNA-1
chr1_1 exon 39642917 39643046 39642917 ID=Msa0021870-mRNA-1:exon:12093;Parent=Msa0021870-mRNA-1
chr1_1 exon 39642502 39642803 39642502 ID=Msa0021870-mRNA-1:exon:12092;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39646660 39647502 39646660 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39646297 39646455 39646297 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39645879 39646025 39645879 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39644834 39644914 39644834 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39642917 39643046 39642917 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
chr1_1 CDS 39642502 39642803 39642502 ID=Msa0021870-mRNA-1:cds;Parent=Msa0021870-mRNA-1
Gene Sequence

>Msa0021870

ATGATGATTGTATCTCAGCAATGGATGCTCTCACTTGAAATACTAGCACTAGTGTTCTTGTTAGGCACAACATTCTCATTAGCTGCTACTAGGAAGACTAATAAAAATATTAAAACAAATATTTTTATGTCTCCCAAGATTGAACTAAATCCAGGATTTGTTTCAAATAAAGTATATTATGATGTTGAGTTTCCAAGAGGTCATATTTCACTCAAGAGTTTCAATGCTGAGCTAGTTGATGATGCAGGGAATTCTATACCTCTCCATCAAACTTATCTACACCATTGGGTTGTTATAAGATACCACCAACCTAAAAATGTGACACCAAATAGCCAATCAGGTATTATTTTCTTAAGAAATAATGGCTTTTGCCAAGAGGATATTTTAGGACAGTACTATGGTCTTGGATCGGAAACAAGACGCACAAATACATATATTCCAGACCCTTATGGTATAGAAGTTGGTAATCCTGCTGAAATTCCAAAAGGGTATGTGGAGAAATGGTTGATCAATGTTCATGCAATCGATACGAGGGGTGTGGATGACCGGGTGGGATGTATTGAGTGCTCATGTGACCTATACAATGTAACAAAAGATGAAAATGGTGATGCTTTGAGTCCAAATTATAAAGGGGGTTTGCAATGCTGTCCTGATAATAGCAAGTGCAAGATGAGGAAAGGATTTTTAGGCCCAAAAAAAAACATCTATTTGAAATATACTGTTATGTGGATCAATTGGGATGTTAACTTTATGGTGCCGGTCAAGGTTTATATATTTGATGTGACTGATACTTTGAAGTTATCGGATAAGTCTAAAGGAATGAGTATAAAGCATGATTGCAAGGTAGAATATGAAGTTGAACCATGCAGCAAAAGTAATGTGAGTGATAGCGGTTGTGTTGATATGAAGAGTGCGAGCTTCCCAATGCAAAATGGAGGTTATGTCATCTATGGAGTTGGTCATCTACATACAGGTGCAATTGGATCAACTCTATATGGACAGGATGGGAAGGTTATATGTAATTCAAACCCAAAATATGGAAATGGAAAGGAAGCAGGAAATGAGAAAGGATATGTTGTAGGAATGTCCACTTGTTATCCTCAACCAGGCTCTATCAAGATACTTAATGGTGAAACTTTAACTCTAGAGAAAGCTAGCAGTATAATGCAAAGGACAAGCATCAGAAGCTTCAAGGAAGAGGATCTCTATCCTCCTTTTGTTCTCTCTAGGTTAAGGCCCAAGCCCAGTCCAAGGTGGAAAAACGGGTCACCAGGATGCACAGAGATCATTGGATCAATCCAACTGGATCGGATCCAAGATCCAACCATCGTGAGGTCTAGGGAGCATGGTAATATGGTAGTTCCGGTGAGCTTGTTCCTCCGGCGTGGTGGCCGGAAACGTCACCACTACGTCGGAGTTCAAGATCTCTACAGTTTTCAAAGCCTTTCACGTTTTAGAAATCAATTTCCACGAAAATCACCGATCCGGATCCGATTCGAAGAAGAAAGAATTAGGAAAGATGATTCGAATGTTCGAAAGTTTGAAAGAAGTACAGATAACGATGGACACGAAATTACCTCTCTTTCGACGGTGCCGCACAATTTCCGCTTCGTCTTTCTTCTTGATTCTGGTTCGGCTCACCTTATTCTCCTTCTTGCTTGA

Protein sequence

>Msa0021870

MMIVSQQWMLSLEILALVFLLGTTFSLAATRKTNKNIKTNIFMSPKIELNPGFVSNKVYYDVEFPRGHISLKSFNAELVDDAGNSIPLHQTYLHHWVVIRYHQPKNVTPNSQSGIIFLRNNGFCQEDILGQYYGLGSETRRTNTYIPDPYGIEVGNPAEIPKGYVEKWLINVHAIDTRGVDDRVGCIECSCDLYNVTKDENGDALSPNYKGGLQCCPDNSKCKMRKGFLGPKKNIYLKYTVMWINWDVNFMVPVKVYIFDVTDTLKLSDKSKGMSIKHDCKVEYEVEPCSKSNVSDSGCVDMKSASFPMQNGGYVIYGVGHLHTGAIGSTLYGQDGKVICNSNPKYGNGKEAGNEKGYVVGMSTCYPQPGSIKILNGETLTLEKASSIMQRTSIRSFKEEDLYPPFVLSRLRPKPSPRWKNGSPGCTEIIGSIQLDRIQDPTIVRSREHGNMVVPVSLFLRRGGRKRHHYVGVQDLYSFQSLSRFRNQFPRKSPIRIRFEEERIRKDDSNVRKFERSTDNDGHEITSLSTVPHNFRFVFLLDSGSAHLILLLA*