Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747060 | XP_013469301.1 | 99.138 | 232 | 2 | 0 | 10 | 241 | 620 | 851 | 1.62e-166 | 491 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747060 | sp|P29503|NEUR_DROME | 43.373 | 83 | 37 | 2 | 167 | 239 | 671 | 753 | 4.78e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747060 | G8A1I5 | 99.138 | 232 | 2 | 0 | 10 | 241 | 620 | 851 | 7.72e-167 | 491 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006380 | Msa0747060 | 0.800953 | 1.131687e-48 | -8.615850e-47 |
Msa0015610 | Msa0747060 | 0.804915 | 1.717476e-49 | -8.615850e-47 |
Msa0021510 | Msa0747060 | 0.812209 | 4.756546e-51 | -8.615850e-47 |
Msa0035150 | Msa0747060 | 0.824431 | 8.100749e-54 | -8.615850e-47 |
Msa0043980 | Msa0747060 | 0.833315 | 5.724313e-56 | -8.615850e-47 |
Msa0044000 | Msa0747060 | 0.838893 | 2.193699e-57 | -8.615850e-47 |
Msa0044330 | Msa0747060 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
Msa0057680 | Msa0747060 | -0.821420 | 4.075624e-53 | -8.615850e-47 |
Msa0058490 | Msa0747060 | 0.860170 | 2.489204e-63 | -8.615850e-47 |
Msa0058510 | Msa0747060 | 0.859801 | 3.217295e-63 | -8.615850e-47 |
Msa0074700 | Msa0747060 | 0.815235 | 1.025627e-51 | -8.615850e-47 |
Msa0079070 | Msa0747060 | 0.818288 | 2.119560e-52 | -8.615850e-47 |
Msa0106850 | Msa0747060 | 0.802511 | 5.419449e-49 | -8.615850e-47 |
Msa0114060 | Msa0747060 | 0.833323 | 5.695425e-56 | -8.615850e-47 |
Msa0608160 | Msa0747060 | 0.800023 | 1.750371e-48 | -8.615850e-47 |
Msa0610430 | Msa0747060 | 0.806969 | 6.352725e-50 | -8.615850e-47 |
Msa0615710 | Msa0747060 | 0.803216 | 3.875002e-49 | -8.615850e-47 |
Msa0626820 | Msa0747060 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
Msa0639310 | Msa0747060 | 0.818522 | 1.875738e-52 | -8.615850e-47 |
Msa0641670 | Msa0747060 | 0.804089 | 2.553372e-49 | -8.615850e-47 |
Msa0648080 | Msa0747060 | 0.803260 | 3.794205e-49 | -8.615850e-47 |
Msa0649490 | Msa0747060 | 0.807801 | 4.232140e-50 | -8.615850e-47 |
Msa0657580 | Msa0747060 | 0.812683 | 3.748008e-51 | -8.615850e-47 |
Msa0661190 | Msa0747060 | -0.811768 | 5.935291e-51 | -8.615850e-47 |
Msa0663240 | Msa0747060 | 0.810439 | 1.152002e-50 | -8.615850e-47 |
Msa0665860 | Msa0747060 | 0.817918 | 2.570639e-52 | -8.615850e-47 |
Msa0672690 | Msa0747060 | 0.805852 | 1.092701e-49 | -8.615850e-47 |
Msa0688480 | Msa0747060 | 0.819840 | 9.403081e-53 | -8.615850e-47 |
Msa0692950 | Msa0747060 | 0.802661 | 5.046324e-49 | -8.615850e-47 |
Msa0709400 | Msa0747060 | 0.838904 | 2.179276e-57 | -8.615850e-47 |
Msa0747060 | Msa0765910 | 0.810004 | 1.430081e-50 | -8.615850e-47 |
Msa0747060 | Msa0773850 | 0.813260 | 2.800735e-51 | -8.615850e-47 |
Msa0747060 | Msa0820850 | 0.803771 | 2.973145e-49 | -8.615850e-47 |
Msa0747060 | Msa0832340 | 0.801394 | 9.192208e-49 | -8.615850e-47 |
Msa0747060 | Msa0849030 | 0.808355 | 3.225782e-50 | -8.615850e-47 |
Msa0747060 | Msa0880020 | 0.811888 | 5.589786e-51 | -8.615850e-47 |
Msa0747060 | Msa0927260 | 0.816074 | 6.671377e-52 | -8.615850e-47 |
Msa0747060 | Msa0932830 | 0.802712 | 4.925415e-49 | -8.615850e-47 |
Msa0747060 | Msa0963270 | 0.827574 | 1.451033e-54 | -8.615850e-47 |
Msa0747060 | Msa0969810 | 0.827262 | 1.724067e-54 | -8.615850e-47 |
Msa0747060 | Msa1029050 | 0.817473 | 3.237928e-52 | -8.615850e-47 |
Msa0747060 | Msa1034150 | 0.806138 | 9.514112e-50 | -8.615850e-47 |
Msa0747060 | Msa1037420 | 0.827817 | 1.268607e-54 | -8.615850e-47 |
Msa0747060 | Msa1039800 | 0.812093 | 5.041183e-51 | -8.615850e-47 |
Msa0747060 | Msa1058750 | 0.809762 | 1.612322e-50 | -8.615850e-47 |
Msa0747060 | Msa1109680 | 0.822028 | 2.948157e-53 | -8.615850e-47 |
Msa0747060 | Msa1114410 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
Msa0747060 | Msa1124960 | 0.828851 | 7.143450e-55 | -8.615850e-47 |
Msa0747060 | Msa1147970 | 0.803539 | 3.322680e-49 | -8.615850e-47 |
Msa0747060 | Msa1159840 | 0.800273 | 1.557270e-48 | -8.615850e-47 |
Msa0747060 | Msa1167340 | 0.814903 | 1.215622e-51 | -8.615850e-47 |
Msa0747060 | Msa1170410 | 0.803851 | 2.861874e-49 | -8.615850e-47 |
Msa0747060 | Msa1174040 | 0.837933 | 3.879421e-57 | -8.615850e-47 |
Msa0747060 | Msa1190930 | 0.806412 | 8.329215e-50 | -8.615850e-47 |
Msa0747060 | Msa1194410 | 0.804930 | 1.705475e-49 | -8.615850e-47 |
Msa0747060 | Msa1228590 | 0.804529 | 2.068003e-49 | -8.615850e-47 |
Msa0747060 | Msa1238840 | 0.812167 | 4.857646e-51 | -8.615850e-47 |
Msa0747060 | Msa1244600 | 0.841564 | 4.402565e-58 | -8.615850e-47 |
Msa0747060 | Msa1244720 | -0.805275 | 1.443854e-49 | -8.615850e-47 |
Msa0747060 | Msa1253020 | 0.858753 | 6.635927e-63 | -8.615850e-47 |
Msa0747060 | Msa1254730 | 0.816387 | 5.676735e-52 | -8.615850e-47 |
Msa0747060 | Msa1279400 | 0.831759 | 1.391207e-55 | -8.615850e-47 |
Msa0747060 | Msa1280320 | 0.829588 | 4.733854e-55 | -8.615850e-47 |
Msa0747060 | Msa1293510 | 0.803488 | 3.403057e-49 | -8.615850e-47 |
Msa0747060 | Msa1294820 | 0.808629 | 2.819451e-50 | -8.615850e-47 |
Msa0747060 | Msa1305660 | 0.817972 | 2.498879e-52 | -8.615850e-47 |
Msa0747060 | Msa1305810 | 0.813860 | 2.066950e-51 | -8.615850e-47 |
Msa0747060 | Msa1332040 | -0.820592 | 6.324141e-53 | -8.615850e-47 |
Msa0747060 | Msa1353980 | 0.810429 | 1.157787e-50 | -8.615850e-47 |
Msa0747060 | Msa1385770 | 0.825869 | 3.705213e-54 | -8.615850e-47 |
Msa0747060 | Msa1394500 | 0.805630 | 1.216603e-49 | -8.615850e-47 |
Msa0747060 | Msa1409240 | 0.829696 | 4.454647e-55 | -8.615850e-47 |
Msa0747060 | Msa1410690 | 0.848752 | 5.017224e-60 | -8.615850e-47 |
Msa0747060 | Msa1411020 | 0.823545 | 1.307516e-53 | -8.615850e-47 |
Msa0747060 | Msa1420490 | 0.829088 | 6.259770e-55 | -8.615850e-47 |
Msa0747060 | Msa1423390 | 0.829245 | 5.732949e-55 | -8.615850e-47 |
Msa0747060 | Msa1424290 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
Msa0747060 | Msa1426030 | 0.802308 | 5.966643e-49 | -8.615850e-47 |
Msa0747060 | Msa1427230 | 0.813424 | 2.577667e-51 | -8.615850e-47 |
Msa0747060 | Msa1434140 | 0.823633 | 1.246856e-53 | -8.615850e-47 |
Msa0747060 | Msa1434350 | 0.824806 | 6.612005e-54 | -8.615850e-47 |
Msa0747060 | Msa1434420 | -0.814245 | 1.699428e-51 | -8.615850e-47 |
Msa0747060 | Msa1439320 | 0.826080 | 3.300226e-54 | -8.615850e-47 |
Msa0747060 | Msa1440370 | 0.828943 | 6.786561e-55 | -8.615850e-47 |
Msa0747060 | Msa1440810 | 0.831221 | 1.887085e-55 | -8.615850e-47 |
Msa0747060 | Msa1444740 | 0.808729 | 2.684442e-50 | -8.615850e-47 |
Msa0747060 | Msa1451550 | 0.817918 | 2.569875e-52 | -8.615850e-47 |
Msa0747060 | Msa1451560 | 0.819377 | 1.199499e-52 | -8.615850e-47 |
Msa0747060 | Msa1452240 | 0.825778 | 3.894253e-54 | -8.615850e-47 |
Msa0747060 | Msa1460830 | 0.808089 | 3.674944e-50 | -8.615850e-47 |
Msa0123560 | Msa0747060 | 0.834970 | 2.202976e-56 | -8.615850e-47 |
Msa0127650 | Msa0747060 | 0.834142 | 3.555809e-56 | -8.615850e-47 |
Msa0127800 | Msa0747060 | 0.819829 | 9.458060e-53 | -8.615850e-47 |
Msa0170220 | Msa0747060 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
Msa0194950 | Msa0747060 | -0.838221 | 3.270022e-57 | -8.615850e-47 |
Msa0208090 | Msa0747060 | 0.811476 | 6.870102e-51 | -8.615850e-47 |
Msa0209350 | Msa0747060 | 0.813056 | 3.104379e-51 | -8.615850e-47 |
Msa0211150 | Msa0747060 | 0.818918 | 1.525364e-52 | -8.615850e-47 |
Msa0217680 | Msa0747060 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
Msa0220580 | Msa0747060 | 0.806580 | 7.676964e-50 | -8.615850e-47 |
Msa0376910 | Msa0747060 | 0.803585 | 3.249682e-49 | -8.615850e-47 |
Msa0383800 | Msa0747060 | 0.800152 | 1.648021e-48 | -8.615850e-47 |
Msa0398670 | Msa0747060 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
Msa0442200 | Msa0747060 | 0.804313 | 2.293525e-49 | -8.615850e-47 |
Msa0454360 | Msa0747060 | 0.835007 | 2.155201e-56 | -8.615850e-47 |
Msa0455040 | Msa0747060 | 0.817460 | 3.260807e-52 | -8.615850e-47 |
Msa0469990 | Msa0747060 | 0.821279 | 4.392803e-53 | -8.615850e-47 |
Msa0477080 | Msa0747060 | 0.829487 | 5.007916e-55 | -8.615850e-47 |
Msa0479970 | Msa0747060 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
Msa0280090 | Msa0747060 | 0.828953 | 6.747930e-55 | -8.615850e-47 |
Msa0315440 | Msa0747060 | -0.833837 | 4.238755e-56 | -8.615850e-47 |
Msa0334550 | Msa0747060 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
Msa0493630 | Msa0747060 | 0.813764 | 2.169787e-51 | -8.615850e-47 |
Msa0502880 | Msa0747060 | 0.816876 | 4.411855e-52 | -8.615850e-47 |
Msa0512340 | Msa0747060 | 0.808479 | 3.034678e-50 | -8.615850e-47 |
Msa0512750 | Msa0747060 | 0.801101 | 1.055173e-48 | -8.615850e-47 |
Msa0529040 | Msa0747060 | 0.815354 | 9.651943e-52 | -8.615850e-47 |
Msa0542260 | Msa0747060 | 0.816618 | 5.039177e-52 | -8.615850e-47 |
Msa0548240 | Msa0747060 | 0.860689 | 1.733744e-63 | -8.615850e-47 |
Msa0554740 | Msa0747060 | 0.811990 | 5.310948e-51 | -8.615850e-47 |
Msa0585230 | Msa0747060 | 0.817225 | 3.682272e-52 | -8.615850e-47 |
Msa0587910 | Msa0747060 | 0.808712 | 2.706511e-50 | -8.615850e-47 |
Msa0592440 | Msa0747060 | 0.801774 | 7.683485e-49 | -8.615850e-47 |
Msa0602390 | Msa0747060 | 0.814367 | 1.597013e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747060 | MtrunA17_Chr1g0197481 | 99.138 | 232 | 2 | 0 | 10 | 241 | 620 | 851 | 1.49e-170 | 491 |
Msa0747060 | MtrunA17_Chr2g0320491 | 54.032 | 248 | 96 | 3 | 10 | 240 | 589 | 835 | 1.22e-75 | 244 |
Msa0747060 | MtrunA17_Chr4g0027771 | 57.082 | 233 | 85 | 5 | 10 | 241 | 600 | 818 | 3.10e-75 | 243 |
Msa0747060 | MtrunA17_Chr2g0292551 | 53.909 | 243 | 93 | 4 | 10 | 235 | 491 | 731 | 9.26e-70 | 228 |
Msa0747060 | MtrunA17_Chr2g0296581 | 40.000 | 135 | 70 | 2 | 104 | 238 | 789 | 912 | 9.36e-21 | 90.9 |
Msa0747060 | MtrunA17_Chr4g0052941 | 32.331 | 133 | 78 | 1 | 107 | 239 | 695 | 815 | 1.66e-15 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0747060 | AT5G04460.6 | 78.017 | 232 | 50 | 1 | 10 | 241 | 633 | 863 | 1.23e-122 | 369 |
Msa0747060 | AT5G04460.3 | 78.017 | 232 | 50 | 1 | 10 | 241 | 633 | 863 | 1.23e-122 | 369 |
Msa0747060 | AT5G04460.1 | 78.017 | 232 | 50 | 1 | 10 | 241 | 633 | 863 | 1.23e-122 | 369 |
Msa0747060 | AT5G04460.4 | 78.017 | 232 | 50 | 1 | 10 | 241 | 633 | 863 | 1.23e-122 | 369 |
Msa0747060 | AT5G04460.2 | 76.289 | 194 | 45 | 1 | 10 | 203 | 633 | 825 | 7.27e-93 | 290 |
Msa0747060 | AT2G27950.2 | 54.274 | 234 | 102 | 4 | 10 | 241 | 609 | 839 | 2.27e-80 | 257 |
Msa0747060 | AT2G27950.3 | 54.274 | 234 | 102 | 4 | 10 | 241 | 609 | 839 | 2.27e-80 | 257 |
Msa0747060 | AT2G27950.1 | 54.274 | 234 | 102 | 4 | 10 | 241 | 609 | 839 | 2.27e-80 | 257 |
Msa0747060 | AT5G04460.5 | 70.192 | 104 | 30 | 1 | 10 | 113 | 633 | 735 | 2.70e-33 | 127 |
Msa0747060 | AT2G34920.2 | 31.739 | 230 | 113 | 5 | 10 | 238 | 475 | 661 | 1.11e-29 | 117 |
Msa0747060 | AT4G20160.2 | 30.627 | 271 | 114 | 7 | 7 | 238 | 975 | 1210 | 3.93e-26 | 107 |
Msa0747060 | AT4G20160.3 | 30.627 | 271 | 114 | 7 | 7 | 238 | 973 | 1208 | 3.97e-26 | 107 |
Msa0747060 | AT2G34920.1 | 29.565 | 230 | 104 | 5 | 10 | 238 | 475 | 647 | 4.54e-24 | 100 |
Msa0747060 | AT1G30860.1 | 29.185 | 233 | 132 | 5 | 10 | 237 | 520 | 724 | 2.37e-20 | 90.1 |
Find 80 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGATTTGTAAAGAATAAT+TGG | 0.153114 | 5_1:+70711475 | None:intergenic |
AACCTCACTGATTGTATAAT+TGG | 0.163159 | 5_1:-70711550 | Msa0747060:three_prime_UTR |
CATCTGATGATGGGTCTAAA+TGG | 0.211482 | 5_1:-70711987 | Msa0747060:CDS |
AACCGCTCAGCTGGTGAAAA+TGG | 0.300085 | 5_1:-70712205 | Msa0747060:intron |
CGTTCATCACCCTGCTGATC+AGG | 0.309076 | 5_1:+70713091 | None:intergenic |
CACCGGTGAAGGTCTGTTAA+TGG | 0.321005 | 5_1:+70713048 | None:intergenic |
GCATATTCCATACTGTAAAA+AGG | 0.330394 | 5_1:-70711694 | Msa0747060:exon |
GAGCTTGTTAATCTCAGTTC+TGG | 0.356267 | 5_1:-70711635 | Msa0747060:three_prime_UTR |
ATCTGATGATGGGTCTAAAT+GGG | 0.368256 | 5_1:-70711986 | Msa0747060:CDS |
CACCAAGATTTGCATCAAAC+TGG | 0.373725 | 5_1:-70712986 | Msa0747060:CDS |
TTTCACCAGCTGAGCGGTTG+AGG | 0.374972 | 5_1:+70712209 | None:intergenic |
TGCTGATCAGGGTCTCGTTC+CGG | 0.380424 | 5_1:+70713103 | None:intergenic |
ACAATTGGCGCTCGGCATAA+AGG | 0.381693 | 5_1:+70711730 | None:intergenic |
GGTGCCAAAGTGGTTGTGGC+GGG | 0.383437 | 5_1:+70713005 | None:intergenic |
GAGTGGTTTCCGTGAAAGTC+TGG | 0.383994 | 5_1:-70713218 | Msa0747060:CDS |
ATCCAGTTTGATGCAAATCT+TGG | 0.387338 | 5_1:+70712984 | None:intergenic |
AAGGTCATGCACCAATTGAC+TGG | 0.415663 | 5_1:-70713165 | Msa0747060:CDS |
GCAGCCCTCAACCGCTCAGC+TGG | 0.426661 | 5_1:-70712214 | Msa0747060:CDS |
CGATGCAAATCCCAGTCAAT+TGG | 0.427755 | 5_1:+70713154 | None:intergenic |
GAATGATTTAAGATCAGATA+TGG | 0.439004 | 5_1:-70712335 | Msa0747060:CDS |
CTATTTGCAGGATTGGCTGC+TGG | 0.440623 | 5_1:-70712012 | Msa0747060:intron |
TGCCAAAGTGGTTGTGGCGG+GGG | 0.445857 | 5_1:+70713007 | None:intergenic |
TGTATAATTGGATTAGCAAA+TGG | 0.447441 | 5_1:-70711538 | Msa0747060:three_prime_UTR |
TTCTTGCGTAAATAAATAGT+TGG | 0.449694 | 5_1:-70711499 | Msa0747060:three_prime_UTR |
TTCACCAGCTGAGCGGTTGA+GGG | 0.453708 | 5_1:+70712210 | None:intergenic |
GAAGTGTATCTAACCTTCTT+CGG | 0.454593 | 5_1:-70713240 | Msa0747060:CDS |
AAGATTTGTAAAGAATAATT+GGG | 0.455765 | 5_1:+70711476 | None:intergenic |
GCTCTGACCACCTCAACAAT+TGG | 0.461320 | 5_1:+70711715 | None:intergenic |
GCTGCTGGGACATCTGATGA+TGG | 0.467728 | 5_1:-70711997 | Msa0747060:CDS |
CACGGAAACCACTCCGAAGA+AGG | 0.479101 | 5_1:+70713227 | None:intergenic |
TTAGTTGATCCAGACTTTCA+CGG | 0.486511 | 5_1:+70713209 | None:intergenic |
TATTTGCAGGATTGGCTGCT+GGG | 0.489271 | 5_1:-70712011 | Msa0747060:intron |
GGGTCTCGTTCCGGTGAGGC+AGG | 0.493156 | 5_1:+70713112 | None:intergenic |
GGCCTGCATGGATATGCAAC+TGG | 0.494398 | 5_1:-70712269 | Msa0747060:CDS |
CTGAAGAAGAGTCCTTTCAT+TGG | 0.495672 | 5_1:-70717011 | Msa0747060:intron |
TACGCCGACTCCTGCCTCAC+CGG | 0.504271 | 5_1:-70713122 | Msa0747060:CDS |
GGAACGAGACCCTGATCAGC+AGG | 0.509295 | 5_1:-70713101 | Msa0747060:CDS |
GTGCCAAAGTGGTTGTGGCG+GGG | 0.518076 | 5_1:+70713006 | None:intergenic |
TGGTGCCAAAGTGGTTGTGG+CGG | 0.522921 | 5_1:+70713004 | None:intergenic |
TCTTGGTGCCAAAGTGGTTG+TGG | 0.530384 | 5_1:+70713001 | None:intergenic |
CTGCTGGGACATCTGATGAT+GGG | 0.530492 | 5_1:-70711996 | Msa0747060:CDS |
GAATCACATGCAGAGGATGT+TGG | 0.531388 | 5_1:-70712293 | Msa0747060:CDS |
GCAGGGTGATGAACGTAATG+AGG | 0.534699 | 5_1:-70713083 | Msa0747060:CDS |
CACAATTTCAGAGCGGTGCA+TGG | 0.543258 | 5_1:+70712949 | None:intergenic |
ATGCCGAGCGCCAATTGTTG+AGG | 0.546842 | 5_1:-70711725 | Msa0747060:CDS |
TTCCAGTTGCATATCCATGC+AGG | 0.551405 | 5_1:+70712267 | None:intergenic |
TGTGCTAGTGAGTTAATTCG+TGG | 0.551715 | 5_1:-70711766 | Msa0747060:CDS |
GGAGAAGGCAACACCGGTGA+AGG | 0.551877 | 5_1:+70713037 | None:intergenic |
GAGGATGTTGGAGGCCTGCA+TGG | 0.555832 | 5_1:-70712281 | Msa0747060:CDS |
CGTTCCGGTGAGGCAGGAGT+CGG | 0.558246 | 5_1:+70713118 | None:intergenic |
GTTCATCACCCTGCTGATCA+GGG | 0.560357 | 5_1:+70713092 | None:intergenic |
AGCCATTAACAGACCTTCAC+CGG | 0.563473 | 5_1:-70713050 | Msa0747060:CDS |
ATTGCAGAGATCTGTCAGAC+AGG | 0.569324 | 5_1:-70712245 | Msa0747060:CDS |
CAGTCATATGTTGAAAGGCA+AGG | 0.575265 | 5_1:-70713184 | Msa0747060:CDS |
AAAGGAAAATTGGAAGGACA+TGG | 0.584700 | 5_1:-70711676 | Msa0747060:three_prime_UTR |
TAATACAGTCATATGTTGAA+AGG | 0.585108 | 5_1:-70713189 | Msa0747060:CDS |
GTATCTAACCTTCTTCGGAG+TGG | 0.596504 | 5_1:-70713235 | Msa0747060:CDS |
AGTGAGTTAATTCGTGGAGG+AGG | 0.598814 | 5_1:-70711760 | Msa0747060:CDS |
AGGTCCAACATACCAATGAA+AGG | 0.607623 | 5_1:+70716999 | None:intergenic |
CCGAGCGCCAATTGTTGAGG+TGG | 0.612498 | 5_1:-70711722 | Msa0747060:CDS |
CAGGGTGATGAACGTAATGA+GGG | 0.613271 | 5_1:-70713082 | Msa0747060:CDS |
GGTGAGGCAGGAGTCGGCGT+AGG | 0.613632 | 5_1:+70713124 | None:intergenic |
TCTGATGATGGGTCTAAATG+GGG | 0.615933 | 5_1:-70711985 | Msa0747060:CDS |
TCTCAGTTCTGGATGTCTCG+AGG | 0.618377 | 5_1:-70711624 | Msa0747060:three_prime_UTR |
AAGATTTGCATCAAACTGGA+TGG | 0.622065 | 5_1:-70712982 | Msa0747060:CDS |
TCACATGCAGAGGATGTTGG+AGG | 0.622068 | 5_1:-70712290 | Msa0747060:CDS |
AGGTCATGCACCAATTGACT+GGG | 0.622249 | 5_1:-70713164 | Msa0747060:CDS |
AAGGCATGAATCACATGCAG+AGG | 0.630235 | 5_1:-70712300 | Msa0747060:CDS |
CCACCTCAACAATTGGCGCT+CGG | 0.637251 | 5_1:+70711722 | None:intergenic |
ATCAGGGTCTCGTTCCGGTG+AGG | 0.644265 | 5_1:+70713108 | None:intergenic |
ACTGGTGGAGAAGGCAACAC+CGG | 0.645499 | 5_1:+70713031 | None:intergenic |
CTGATGATGGGTCTAAATGG+GGG | 0.664451 | 5_1:-70711984 | Msa0747060:CDS |
GCAGAGATCTGTCAGACAGG+AGG | 0.672293 | 5_1:-70712242 | Msa0747060:CDS |
TGCAAATCTTGGTGCCAAAG+TGG | 0.673481 | 5_1:+70712995 | None:intergenic |
GAACGAGACCCTGATCAGCA+GGG | 0.680634 | 5_1:-70713100 | Msa0747060:CDS |
TGTACAAAAGCGAATCAATG+TGG | 0.689013 | 5_1:+70711923 | None:intergenic |
GCTAGTGAGTTAATTCGTGG+AGG | 0.712981 | 5_1:-70711763 | Msa0747060:CDS |
GATATGGCAAGACTTCAGCA+AGG | 0.721227 | 5_1:-70712319 | Msa0747060:CDS |
ATCCAATTATACAATCAGTG+AGG | 0.726694 | 5_1:+70711548 | None:intergenic |
AATTGCTCACAATTTCAGAG+CGG | 0.765544 | 5_1:+70712942 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAAAAAAAAAAATTT+GGG | + | chr5_1:70713341-70713360 | None:intergenic | 0.0% |
!!! | TATTTTTAAAAAAAAAAATT+TGG | + | chr5_1:70713342-70713361 | None:intergenic | 0.0% |
!!! | TTTTTTTTTATTTTTTTATT+TGG | - | chr5_1:70716642-70716661 | Msa0747060:intron | 0.0% |
!!! | TTTTAAAAAAAAAAATTTGG+GGG | + | chr5_1:70713339-70713358 | None:intergenic | 10.0% |
!!! | NNNNNNNNCAAATTTTTTCA+TGG | + | chr5_1:70714741-70714760 | None:intergenic | 10.0% |
!!! | TTTGAATGAATTTATTATTT+TGG | - | chr5_1:70716362-70716381 | Msa0747060:intron | 10.0% |
!! | AAAAAAAAAACTAATATATG+GGG | + | chr5_1:70716631-70716650 | None:intergenic | 10.0% |
!!! | TTGAATTTTTCAAATTAAGT+GGG | + | chr5_1:70711879-70711898 | None:intergenic | 15.0% |
!!! | ATTGAATTTTTCAAATTAAG+TGG | + | chr5_1:70711880-70711899 | None:intergenic | 15.0% |
!!! | TTTGTTTTAGTTTTAATGAT+TGG | + | chr5_1:70712187-70712206 | None:intergenic | 15.0% |
!! | ATCATTAAAACTAAAACAAA+AGG | - | chr5_1:70712187-70712206 | Msa0747060:intron | 15.0% |
!! | TTTAAAAAAAAAAATTTGGG+GGG | + | chr5_1:70713338-70713357 | None:intergenic | 15.0% |
!!! | AATAATTTTTTTATTGAGAG+GGG | + | chr5_1:70713929-70713948 | None:intergenic | 15.0% |
!!! | GAATAATTTTTTTATTGAGA+GGG | + | chr5_1:70713930-70713949 | None:intergenic | 15.0% |
!!! | ATTTAAAGTTGATTTTGAAA+AGG | + | chr5_1:70714087-70714106 | None:intergenic | 15.0% |
!!! | TTTATTTTAGATTTTGGAAA+GGG | + | chr5_1:70715073-70715092 | None:intergenic | 15.0% |
!!! | ATTTATTTTAGATTTTGGAA+AGG | + | chr5_1:70715074-70715093 | None:intergenic | 15.0% |
!! | TTAACAAAAAATATTACCTA+GGG | - | chr5_1:70715615-70715634 | Msa0747060:intron | 15.0% |
!! | GAAAATTATTAAATTTGATC+CGG | - | chr5_1:70715760-70715779 | Msa0747060:intron | 15.0% |
!!! | ATATTTTTAATCATTTAGCA+TGG | + | chr5_1:70715836-70715855 | None:intergenic | 15.0% |
!! | AAGATTTGTAAAGAATAATT+GGG | + | chr5_1:70717016-70717035 | None:intergenic | 15.0% |
!! | AAAGATTTGTAAAGAATAAT+TGG | + | chr5_1:70717017-70717036 | None:intergenic | 15.0% |
!! | TTAAAACTAAAACAAAAGGA+AGG | - | chr5_1:70712191-70712210 | Msa0747060:intron | 20.0% |
!!! | TTTCATTCATTTTACTAAGA+TGG | + | chr5_1:70712387-70712406 | None:intergenic | 20.0% |
!!! | CTTTTAATTTATCTTTGTTG+GGG | + | chr5_1:70713222-70713241 | None:intergenic | 20.0% |
!!! | GCTTTTAATTTATCTTTGTT+GGG | + | chr5_1:70713223-70713242 | None:intergenic | 20.0% |
!!! | AGCTTTTAATTTATCTTTGT+TGG | + | chr5_1:70713224-70713243 | None:intergenic | 20.0% |
!! | GAAAATTCATTGGATAAATT+GGG | + | chr5_1:70713299-70713318 | None:intergenic | 20.0% |
!! | TTAAAAAAAAAAATTTGGGG+GGG | + | chr5_1:70713337-70713356 | None:intergenic | 20.0% |
!!! | AGTAACAAATTTTTGTCTTT+TGG | + | chr5_1:70713464-70713483 | None:intergenic | 20.0% |
!! | TTTACTATACGATCAATAAT+AGG | - | chr5_1:70713500-70713519 | Msa0747060:intron | 20.0% |
!!! | GGAATAATTTTTTTATTGAG+AGG | + | chr5_1:70713931-70713950 | None:intergenic | 20.0% |
!! | CAATAAAAAAATTATTCCGT+AGG | - | chr5_1:70713933-70713952 | Msa0747060:intron | 20.0% |
!!! | AAATGAATTTTCCTACTATT+TGG | + | chr5_1:70714019-70714038 | None:intergenic | 20.0% |
!!! | CGGATTTATTAAACAATTTT+GGG | + | chr5_1:70714436-70714455 | None:intergenic | 20.0% |
!!! | TCGGATTTATTAAACAATTT+TGG | + | chr5_1:70714437-70714456 | None:intergenic | 20.0% |
!! | ATATTTATCAAATTTCCAAC+TGG | - | chr5_1:70714978-70714997 | Msa0747060:intron | 20.0% |
!!! | AGGAGATTTATTTTAGATTT+TGG | + | chr5_1:70715079-70715098 | None:intergenic | 20.0% |
!!! | CTAGGTAATATTTTTTGTTA+AGG | + | chr5_1:70715616-70715635 | None:intergenic | 20.0% |
!! | CTTAACAAAAAATATTACCT+AGG | - | chr5_1:70715614-70715633 | Msa0747060:intron | 20.0% |
!!! | ATATAGTATGAAAGCATAAA+GGG | + | chr5_1:70716072-70716091 | None:intergenic | 20.0% |
!!! | AATATAGTATGAAAGCATAA+AGG | + | chr5_1:70716073-70716092 | None:intergenic | 20.0% |
! | ATTCAATATGTGAATCTGTT+TGG | - | chr5_1:70711685-70711704 | Msa0747060:exon | 25.0% |
!!! | CTATTTTTATTCCTGTTGTT+TGG | + | chr5_1:70712120-70712139 | None:intergenic | 25.0% |
!!! | GTTTTAGTTTTAATGATTGG+TGG | + | chr5_1:70712184-70712203 | None:intergenic | 25.0% |
! | TTGTATTCTTTACGACAATT+TGG | + | chr5_1:70712343-70712362 | None:intergenic | 25.0% |
! | AATTGTCGTAAAGAATACAA+AGG | - | chr5_1:70712343-70712362 | Msa0747060:CDS | 25.0% |
! | TACAAATTTATTACTCACTC+AGG | + | chr5_1:70712698-70712717 | None:intergenic | 25.0% |
!!! | ATTACATAATGTTGTTTTGC+AGG | + | chr5_1:70712786-70712805 | None:intergenic | 25.0% |
! | GGAAAATTCATTGGATAAAT+TGG | + | chr5_1:70713300-70713319 | None:intergenic | 25.0% |
!!! | AGGATTTTAGGAAAATTCAT+TGG | + | chr5_1:70713309-70713328 | None:intergenic | 25.0% |
! | AAAAAGGAAAGAAAGTAAAC+CGG | - | chr5_1:70713398-70713417 | Msa0747060:intron | 25.0% |
!! | AACAAATTTTTGTCTTTTGG+TGG | + | chr5_1:70713461-70713480 | None:intergenic | 25.0% |
! | AAATGGATAAATGAATGTGT+GGG | + | chr5_1:70713993-70714012 | None:intergenic | 25.0% |
! | AAAATGGATAAATGAATGTG+TGG | + | chr5_1:70713994-70714013 | None:intergenic | 25.0% |
!!! | TGATTTTATGAGATTTTTGG+TGG | + | chr5_1:70714400-70714419 | None:intergenic | 25.0% |
!! | GGATGATTTTATGAGATTTT+TGG | + | chr5_1:70714403-70714422 | None:intergenic | 25.0% |
! | TTGATAAATATAAGCGAAAC+AGG | + | chr5_1:70714969-70714988 | None:intergenic | 25.0% |
! | TACAATATCAAGGTAGAAAT+AGG | + | chr5_1:70715099-70715118 | None:intergenic | 25.0% |
! | GGATCTTTAATTAATGTTTC+AGG | - | chr5_1:70715187-70715206 | Msa0747060:intron | 25.0% |
! | TAATACAGTCATATGTTGAA+AGG | - | chr5_1:70715300-70715319 | Msa0747060:intron | 25.0% |
!!! | AATAATTTTCTAGCTTCAAC+TGG | + | chr5_1:70715750-70715769 | None:intergenic | 25.0% |
!!! | TATGAATAGTTTTAAAGCTC+TGG | - | chr5_1:70715907-70715926 | Msa0747060:intron | 25.0% |
!!! | ATGAATAGTTTTAAAGCTCT+GGG | - | chr5_1:70715908-70715927 | Msa0747060:intron | 25.0% |
! | GAAGAAAAGAGTAATTAAAG+TGG | + | chr5_1:70715998-70716017 | None:intergenic | 25.0% |
! | ACACAAGAACACAAAATAAA+TGG | + | chr5_1:70716020-70716039 | None:intergenic | 25.0% |
!! | GAATGATTTAAGATCAGATA+TGG | - | chr5_1:70716154-70716173 | Msa0747060:intron | 25.0% |
! | ATCTGCAAGAAATTGAAATT+TGG | + | chr5_1:70716677-70716696 | None:intergenic | 25.0% |
!! | CAATTTTCCTTTTTACAGTA+TGG | + | chr5_1:70716805-70716824 | None:intergenic | 25.0% |
! | CATACTGTAAAAAGGAAAAT+TGG | - | chr5_1:70716803-70716822 | Msa0747060:intron | 25.0% |
! | CATATGTAATCAGAAAAACA+AGG | + | chr5_1:70716918-70716937 | None:intergenic | 25.0% |
!!! | CTTGTTTTTCTGATTACATA+TGG | - | chr5_1:70716916-70716935 | Msa0747060:intron | 25.0% |
!!! | TGTATAATTGGATTAGCAAA+TGG | - | chr5_1:70716951-70716970 | Msa0747060:intron | 25.0% |
! | TTCTTGCGTAAATAAATAGT+TGG | - | chr5_1:70716990-70717009 | Msa0747060:intron | 25.0% |
AACACATATGACCAGATTAT+TGG | + | chr5_1:70711591-70711610 | None:intergenic | 30.0% | |
! | AATCTGTTTGGAATTGCAAT+TGG | - | chr5_1:70711697-70711716 | Msa0747060:exon | 30.0% |
ACTCAAATCATTACCAACTT+AGG | + | chr5_1:70711737-70711756 | None:intergenic | 30.0% | |
GAACAAAAATGAATCGTGAA+TGG | + | chr5_1:70711776-70711795 | None:intergenic | 30.0% | |
AAATAATCCACAAAGGATCT+TGG | + | chr5_1:70711911-70711930 | None:intergenic | 30.0% | |
TTCAACATAAATGACTCAAC+CGG | + | chr5_1:70711965-70711984 | None:intergenic | 30.0% | |
ATGACTCTGTAAATACTTTC+TGG | + | chr5_1:70712087-70712106 | None:intergenic | 30.0% | |
! | TTATTCCTGTTGTTTGGTAA+TGG | + | chr5_1:70712114-70712133 | None:intergenic | 30.0% |
TTCTTATTGAAAAGGTCAAG+AGG | + | chr5_1:70712247-70712266 | None:intergenic | 30.0% | |
! | GACCTTTTCAATAAGAACAT+CGG | - | chr5_1:70712250-70712269 | Msa0747060:CDS | 30.0% |
TTCCGATGTTCTTATTGAAA+AGG | + | chr5_1:70712255-70712274 | None:intergenic | 30.0% | |
AGACCTTATGTTGGAAAATA+CGG | - | chr5_1:70712279-70712298 | Msa0747060:CDS | 30.0% | |
! | TTACCGTATTTTCCAACATA+AGG | + | chr5_1:70712285-70712304 | None:intergenic | 30.0% |
TTTGGATAATATGGAAGGAA+AGG | + | chr5_1:70712310-70712329 | None:intergenic | 30.0% | |
TACAGTTTGGATAATATGGA+AGG | + | chr5_1:70712315-70712334 | None:intergenic | 30.0% | |
TTGCTACAGTTTGGATAATA+TGG | + | chr5_1:70712319-70712338 | None:intergenic | 30.0% | |
! | ATTCATTTTACTAAGATGGC+GGG | + | chr5_1:70712383-70712402 | None:intergenic | 30.0% |
! | CATTCATTTTACTAAGATGG+CGG | + | chr5_1:70712384-70712403 | None:intergenic | 30.0% |
!!! | TTTGTTTTGGTTTGACTGTT+GGG | + | chr5_1:70712984-70713003 | None:intergenic | 30.0% |
!! | ATGGTCACAATACTTTGTTT+TGG | + | chr5_1:70712997-70713016 | None:intergenic | 30.0% |
GTTTGAAGAGAATCTTTGTA+GGG | + | chr5_1:70713029-70713048 | None:intergenic | 30.0% | |
!! | TTTGTTTTTCTAAGGAGGAA+GGG | + | chr5_1:70713270-70713289 | None:intergenic | 30.0% |
!! | ATTTGTTTTTCTAAGGAGGA+AGG | + | chr5_1:70713271-70713290 | None:intergenic | 30.0% |
!! | TTCGATTTGTTTTTCTAAGG+AGG | + | chr5_1:70713275-70713294 | None:intergenic | 30.0% |
!! | GGATTCGATTTGTTTTTCTA+AGG | + | chr5_1:70713278-70713297 | None:intergenic | 30.0% |
ATAGAAGAAATTATACCTGC+AGG | - | chr5_1:70713368-70713387 | Msa0747060:intron | 30.0% | |
TAGAAGAAATTATACCTGCA+GGG | - | chr5_1:70713369-70713388 | Msa0747060:intron | 30.0% | |
TAGTAAAGCAATTATCATCG+TGG | + | chr5_1:70713487-70713506 | None:intergenic | 30.0% | |
!! | GTTATCCCTTTTGTTTACTT+GGG | + | chr5_1:70713569-70713588 | None:intergenic | 30.0% |
!! | AGTTATCCCTTTTGTTTACT+TGG | + | chr5_1:70713570-70713589 | None:intergenic | 30.0% |
! | TTTCACAAAAGTATGTTGAC+AGG | + | chr5_1:70713653-70713672 | None:intergenic | 30.0% |
TATTGATAGGCGAAAAATCT+TGG | + | chr5_1:70713742-70713761 | None:intergenic | 30.0% | |
AAAAATAAGAAAGGCGACAA+CGG | - | chr5_1:70713887-70713906 | Msa0747060:intron | 30.0% | |
!!! | CATCATCAGTTTTGGTTAAT+AGG | + | chr5_1:70713962-70713981 | None:intergenic | 30.0% |
AATGGATAAATGAATGTGTG+GGG | + | chr5_1:70713992-70714011 | None:intergenic | 30.0% | |
! | TGATTTAAAGTATCTGGATG+TGG | + | chr5_1:70714051-70714070 | None:intergenic | 30.0% |
!! | CTCTGTTGATTTAAAGTATC+TGG | + | chr5_1:70714057-70714076 | None:intergenic | 30.0% |
!! | AATTTTGATCGCAAATGAAG+TGG | + | chr5_1:70714148-70714167 | None:intergenic | 30.0% |
!!! | GATTTTTGGTGGAATTTCAT+CGG | + | chr5_1:70714389-70714408 | None:intergenic | 30.0% |
!!! | ACAATTTTGGGACATTTTGA+AGG | + | chr5_1:70714424-70714443 | None:intergenic | 30.0% |
! | GTTAATGGTGTTAATGTAGA+AGG | + | chr5_1:70714672-70714691 | None:intergenic | 30.0% |
! | CGATGATAATGTATACAGTA+TGG | - | chr5_1:70714877-70714896 | Msa0747060:intron | 30.0% |
TAAAGATCCATACTATCACA+AGG | + | chr5_1:70715176-70715195 | None:intergenic | 30.0% | |
CTGAAACATTATACGAAGAA+AGG | + | chr5_1:70715227-70715246 | None:intergenic | 30.0% | |
CTTTCTTCGTATAATGTTTC+AGG | - | chr5_1:70715225-70715244 | Msa0747060:intron | 30.0% | |
CTCATTTCACATATTCAACT+AGG | + | chr5_1:70715883-70715902 | None:intergenic | 30.0% | |
!! | TGTTTGTGATCTTTGTTGTT+AGG | - | chr5_1:70715939-70715958 | Msa0747060:intron | 30.0% |
! | TGATACATTTTTCTGACAAC+AGG | - | chr5_1:70715972-70715991 | Msa0747060:intron | 30.0% |
!!! | ATTACTGTTTTGATTCTGAC+TGG | - | chr5_1:70716111-70716130 | Msa0747060:intron | 30.0% |
!!! | TTACTGTTTTGATTCTGACT+GGG | - | chr5_1:70716112-70716131 | Msa0747060:intron | 30.0% |
ATTCAAACAAAACACAACAG+TGG | + | chr5_1:70716349-70716368 | None:intergenic | 30.0% | |
ATTTCAATTTCTTGCAGATG+TGG | - | chr5_1:70716678-70716697 | Msa0747060:intron | 30.0% | |
GCATATTCCATACTGTAAAA+AGG | - | chr5_1:70716795-70716814 | Msa0747060:intron | 30.0% | |
CTGTAAAAAGGAAAATTGGA+AGG | - | chr5_1:70716807-70716826 | Msa0747060:intron | 30.0% | |
! | AACCTCACTGATTGTATAAT+TGG | - | chr5_1:70716939-70716958 | Msa0747060:intron | 30.0% |
ATCCAATTATACAATCAGTG+AGG | + | chr5_1:70716944-70716963 | None:intergenic | 30.0% | |
TAACACTGTTAGTAGGCAAT+AGG | + | chr5_1:70711513-70711532 | None:intergenic | 35.0% | |
TGTTCTGTAACACTGTTAGT+AGG | + | chr5_1:70711520-70711539 | None:intergenic | 35.0% | |
TTGATCAAGAGCCAATAATC+TGG | - | chr5_1:70711577-70711596 | Msa0747060:three_prime_UTR | 35.0% | |
! | TGTCTTTCTCTCTGAGTTTT+AGG | - | chr5_1:70711635-70711654 | Msa0747060:three_prime_UTR | 35.0% |
! | TACACTTTTGCTTCCTAAGT+TGG | - | chr5_1:70711721-70711740 | Msa0747060:CDS | 35.0% |
! | CGTTTTGCATTTGACATGAA+AGG | - | chr5_1:70711819-70711838 | Msa0747060:intron | 35.0% |
CATGAAAGGCCTTCAAAAAA+TGG | - | chr5_1:70711833-70711852 | Msa0747060:intron | 35.0% | |
!!! | CCAATAGCTCCATTTTTTGA+AGG | + | chr5_1:70711845-70711864 | None:intergenic | 35.0% |
CCTTCAAAAAATGGAGCTAT+TGG | - | chr5_1:70711842-70711861 | Msa0747060:intron | 35.0% | |
GCTAACGAAATAATCCACAA+AGG | + | chr5_1:70711918-70711937 | None:intergenic | 35.0% | |
ACTCTGTAAATACTTTCTGG+TGG | + | chr5_1:70712084-70712103 | None:intergenic | 35.0% | |
TGAATACCCATACAAAGAGT+CGG | - | chr5_1:70712152-70712171 | Msa0747060:intron | 35.0% | |
!! | CAATTTGGTTTGCTACAGTT+TGG | + | chr5_1:70712328-70712347 | None:intergenic | 35.0% |
CATAACGTTCTTAACTGGTT+AGG | + | chr5_1:70712446-70712465 | None:intergenic | 35.0% | |
TTTGGCATAACGTTCTTAAC+TGG | + | chr5_1:70712451-70712470 | None:intergenic | 35.0% | |
CGACAAAAGATAATCTGTTG+CGG | + | chr5_1:70712577-70712596 | None:intergenic | 35.0% | |
! | CGCAACAGATTATCTTTTGT+CGG | - | chr5_1:70712575-70712594 | Msa0747060:intron | 35.0% |
AGGATAACGTTAATGACTCT+TGG | + | chr5_1:70712766-70712785 | None:intergenic | 35.0% | |
CGGGGAAACTTTAATCTTAA+AGG | - | chr5_1:70712947-70712966 | Msa0747060:intron | 35.0% | |
!!! | CTTTGTTTTGGTTTGACTGT+TGG | + | chr5_1:70712985-70713004 | None:intergenic | 35.0% |
GGTTTGAAGAGAATCTTTGT+AGG | + | chr5_1:70713030-70713049 | None:intergenic | 35.0% | |
!! | ATAGGAATGGTTCTAATTGG+TGG | + | chr5_1:70713102-70713121 | None:intergenic | 35.0% |
ATTTATCTTTGTTGGGGAAG+TGG | + | chr5_1:70713216-70713235 | None:intergenic | 35.0% | |
!! | TTGTTTTTCTAAGGAGGAAG+GGG | + | chr5_1:70713269-70713288 | None:intergenic | 35.0% |
AAAAAAAAAATTTGGGGGGG+TGG | + | chr5_1:70713334-70713353 | None:intergenic | 35.0% | |
AGAAGAAATTATACCTGCAG+GGG | - | chr5_1:70713370-70713389 | Msa0747060:intron | 35.0% | |
! | ATTCAAGGAAGTTGAGCTTT+TGG | + | chr5_1:70713529-70713548 | None:intergenic | 35.0% |
TTCCTTGAATCTCCACTAAT+TGG | - | chr5_1:70713539-70713558 | Msa0747060:intron | 35.0% | |
TACCAATTAGTGGAGATTCA+AGG | + | chr5_1:70713544-70713563 | None:intergenic | 35.0% | |
GTAGACCCAAGTAAACAAAA+GGG | - | chr5_1:70713561-70713580 | Msa0747060:intron | 35.0% | |
GAGTTAATGTTCCTGAATCT+TGG | + | chr5_1:70713631-70713650 | None:intergenic | 35.0% | |
GTTGAATGTTCGATCTATGA+GGG | + | chr5_1:70713720-70713739 | None:intergenic | 35.0% | |
GAGGATGATACTCTATTGAT+AGG | + | chr5_1:70713755-70713774 | None:intergenic | 35.0% | |
! | CTGTTTAATGGGTATGGTAT+TGG | + | chr5_1:70713815-70713834 | None:intergenic | 35.0% |
! | TAATGTGTTGATGCAAGCTA+TGG | + | chr5_1:70713849-70713868 | None:intergenic | 35.0% |
GCAGCCAACAAAAATAAGAA+AGG | - | chr5_1:70713878-70713897 | Msa0747060:intron | 35.0% | |
!!! | GTCGCCTTTCTTATTTTTGT+TGG | + | chr5_1:70713885-70713904 | None:intergenic | 35.0% |
TTTGGTTAATAGGTCTCCTA+CGG | + | chr5_1:70713952-70713971 | None:intergenic | 35.0% | |
! | ATCCATTTTCGCCAAATAGT+AGG | - | chr5_1:70714005-70714024 | Msa0747060:intron | 35.0% |
TTCCTACTATTTGGCGAAAA+TGG | + | chr5_1:70714010-70714029 | None:intergenic | 35.0% | |
! | AGAGGGAAGCAAATTTTAGA+TGG | + | chr5_1:70714171-70714190 | None:intergenic | 35.0% |
! | TTTTATTGCTTTGATCCCGA+AGG | + | chr5_1:70714334-70714353 | None:intergenic | 35.0% |
TTCACTTCTTCCGTAGTAAA+CGG | - | chr5_1:70714513-70714532 | Msa0747060:intron | 35.0% | |
! | CAACTTTCTTTTACTGAAGC+GGG | + | chr5_1:70714552-70714571 | None:intergenic | 35.0% |
! | CCAACTTTCTTTTACTGAAG+CGG | + | chr5_1:70714553-70714572 | None:intergenic | 35.0% |
AACTGAAGCCCTTCAATAAT+TGG | - | chr5_1:70714576-70714595 | Msa0747060:intron | 35.0% | |
CGTTCAAAATATTAGAGAGG+CGG | + | chr5_1:70714649-70714668 | None:intergenic | 35.0% | |
AGGCGTTCAAAATATTAGAG+AGG | + | chr5_1:70714652-70714671 | None:intergenic | 35.0% | |
ATCAGTGTGGTATCTGTTAA+TGG | + | chr5_1:70714687-70714706 | None:intergenic | 35.0% | |
TATACATTATCATCGTCAGG+AGG | + | chr5_1:70714872-70714891 | None:intergenic | 35.0% | |
CTGTATACATTATCATCGTC+AGG | + | chr5_1:70714875-70714894 | None:intergenic | 35.0% | |
TGCAAAATATGCAAAAGGGA+AGG | + | chr5_1:70714929-70714948 | None:intergenic | 35.0% | |
GCGATGCAAAATATGCAAAA+GGG | + | chr5_1:70714933-70714952 | None:intergenic | 35.0% | |
TGCGATGCAAAATATGCAAA+AGG | + | chr5_1:70714934-70714953 | None:intergenic | 35.0% | |
ATCAAATTTCCAACTGGCAT+TGG | - | chr5_1:70714984-70715003 | Msa0747060:intron | 35.0% | |
ACAGAAATCAAGACACGTTT+AGG | + | chr5_1:70715034-70715053 | None:intergenic | 35.0% | |
TAAACGTGTCTTGATTTCTG+TGG | - | chr5_1:70715033-70715052 | Msa0747060:intron | 35.0% | |
CCATGTTCTGTACAATATCA+AGG | + | chr5_1:70715109-70715128 | None:intergenic | 35.0% | |
CCTTGATATTGTACAGAACA+TGG | - | chr5_1:70715106-70715125 | Msa0747060:intron | 35.0% | |
TGGCTTGATACTTCATTTAC+TGG | - | chr5_1:70715126-70715145 | Msa0747060:intron | 35.0% | |
GAAGTGTATCTAACCTTCTT+CGG | - | chr5_1:70715249-70715268 | Msa0747060:intron | 35.0% | |
TTAGTTGATCCAGACTTTCA+CGG | + | chr5_1:70715283-70715302 | None:intergenic | 35.0% | |
ATCCAGTTTGATGCAAATCT+TGG | + | chr5_1:70715508-70715527 | None:intergenic | 35.0% | |
AAGATTTGCATCAAACTGGA+TGG | - | chr5_1:70715507-70715526 | Msa0747060:intron | 35.0% | |
AATTGCTCACAATTTCAGAG+CGG | + | chr5_1:70715550-70715569 | None:intergenic | 35.0% | |
AAGTGCTATCTTACGAACAT+AGG | + | chr5_1:70715587-70715606 | None:intergenic | 35.0% | |
TATTCTGTATGCAAATCCCT+AGG | + | chr5_1:70715634-70715653 | None:intergenic | 35.0% | |
CCTTAACTAACATCTTGAAC+CGG | + | chr5_1:70715782-70715801 | None:intergenic | 35.0% | |
!! | TGATCTTTGTTGTTAGGTCT+TGG | - | chr5_1:70715945-70715964 | Msa0747060:intron | 35.0% |
ACTTGCATAAGTAAAGGACT+AGG | + | chr5_1:70716046-70716065 | None:intergenic | 35.0% | |
TCTGCTTCATTCATTGCTAT+TGG | - | chr5_1:70716320-70716339 | Msa0747060:intron | 35.0% | |
ATGAGGGATGAGATCAAAAA+AGG | + | chr5_1:70716446-70716465 | None:intergenic | 35.0% | |
!! | ATCTGATGATGGGTCTAAAT+GGG | - | chr5_1:70716503-70716522 | Msa0747060:intron | 35.0% |
TGTACAAAAGCGAATCAATG+TGG | + | chr5_1:70716569-70716588 | None:intergenic | 35.0% | |
!!! | ACATTGATTCGCTTTTGTAC+AGG | - | chr5_1:70716568-70716587 | Msa0747060:intron | 35.0% |
AAAGGAAAATTGGAAGGACA+TGG | - | chr5_1:70716813-70716832 | Msa0747060:intron | 35.0% | |
CTGAAGAAGAGTCCTTTCAT+TGG | - | chr5_1:70711478-70711497 | Msa0747060:three_prime_UTR | 40.0% | |
GAGTCCTTTCATTGGTATGT+TGG | - | chr5_1:70711486-70711505 | Msa0747060:three_prime_UTR | 40.0% | |
AGGTCCAACATACCAATGAA+AGG | + | chr5_1:70711493-70711512 | None:intergenic | 40.0% | |
!!! | CTTTCTCTCTGAGTTTTAGG+AGG | - | chr5_1:70711638-70711657 | Msa0747060:three_prime_UTR | 40.0% |
TTCAACTCCAAGATCCTTTG+TGG | - | chr5_1:70711901-70711920 | Msa0747060:intron | 40.0% | |
! | TTGTGCAGGTTGAATCACTA+TGG | + | chr5_1:70712044-70712063 | None:intergenic | 40.0% |
ATAGTGATTCAACCTGCACA+AGG | - | chr5_1:70712043-70712062 | Msa0747060:intron | 40.0% | |
TACTGCCATTACCAAACAAC+AGG | - | chr5_1:70712106-70712125 | Msa0747060:intron | 40.0% | |
GACTCTTTGTATGGGTATTC+AGG | + | chr5_1:70712153-70712172 | None:intergenic | 40.0% | |
GAATACCCATACAAAGAGTC+GGG | - | chr5_1:70712153-70712172 | Msa0747060:intron | 40.0% | |
AAACACCCGACTCTTTGTAT+GGG | + | chr5_1:70712161-70712180 | None:intergenic | 40.0% | |
TCAAGAGGAATTCGTTCCTA+TGG | + | chr5_1:70712232-70712251 | None:intergenic | 40.0% | |
CGGAATTAGAGACCTTATGT+TGG | - | chr5_1:70712270-70712289 | Msa0747060:CDS | 40.0% | |
GAATGAAATGATGCCGCAAA+TGG | - | chr5_1:70712399-70712418 | Msa0747060:intron | 40.0% | |
AAATGATGCCGCAAATGGAA+TGG | - | chr5_1:70712404-70712423 | Msa0747060:intron | 40.0% | |
TTGTTTCGCCATTCCATTTG+CGG | + | chr5_1:70712415-70712434 | None:intergenic | 40.0% | |
GGAATGGCGAAACAAAAGAA+AGG | - | chr5_1:70712420-70712439 | Msa0747060:intron | 40.0% | |
CAAAAGATAATCTGTTGCGG+AGG | + | chr5_1:70712574-70712593 | None:intergenic | 40.0% | |
TTAATGACTCTTGGAGATGG+AGG | + | chr5_1:70712757-70712776 | None:intergenic | 40.0% | |
ACGTTAATGACTCTTGGAGA+TGG | + | chr5_1:70712760-70712779 | None:intergenic | 40.0% | |
! | TTTTGATCTGGCTGTCAGTA+AGG | + | chr5_1:70712924-70712943 | None:intergenic | 40.0% |
TACTGACAGCCAGATCAAAA+AGG | - | chr5_1:70712924-70712943 | Msa0747060:intron | 40.0% | |
!!! | TTTTGGTTTGACTGTTGGGT+GGG | + | chr5_1:70712980-70712999 | None:intergenic | 40.0% |
!! | CTTTGTAGGGTAGTTGGTAA+TGG | + | chr5_1:70713016-70713035 | None:intergenic | 40.0% |
GAGAATCTTTGTAGGGTAGT+TGG | + | chr5_1:70713022-70713041 | None:intergenic | 40.0% | |
!! | GGGATAGGAATGGTTCTAAT+TGG | + | chr5_1:70713105-70713124 | None:intergenic | 40.0% |
!!! | AAGTTTTGAAAGCCCGCTAT+GGG | + | chr5_1:70713153-70713172 | None:intergenic | 40.0% |
!!! | AAAGTTTTGAAAGCCCGCTA+TGG | + | chr5_1:70713154-70713173 | None:intergenic | 40.0% |
!! | TGTTTTTCTAAGGAGGAAGG+GGG | + | chr5_1:70713268-70713287 | None:intergenic | 40.0% |
AAGAAAGTAAACCGGAAGAG+AGG | - | chr5_1:70713406-70713425 | Msa0747060:intron | 40.0% | |
TACTTGGGTCTACCAATTAG+TGG | + | chr5_1:70713554-70713573 | None:intergenic | 40.0% | |
GGTAGACCCAAGTAAACAAA+AGG | - | chr5_1:70713560-70713579 | Msa0747060:intron | 40.0% | |
GGTTGAATGTTCGATCTATG+AGG | + | chr5_1:70713721-70713740 | None:intergenic | 40.0% | |
GAGTATCATCCTCAAACTGA+AGG | - | chr5_1:70713762-70713781 | Msa0747060:intron | 40.0% | |
GATAAGTCACCTTCAGTTTG+AGG | + | chr5_1:70713774-70713793 | None:intergenic | 40.0% | |
!! | TTGGTAGCGCAAATTTGGTT+CGG | + | chr5_1:70713796-70713815 | None:intergenic | 40.0% |
!! | TGGTATTGGTAGCGCAAATT+TGG | + | chr5_1:70713801-70713820 | None:intergenic | 40.0% |
CATCAACACATTAAGCCCTT+CGG | - | chr5_1:70713856-70713875 | Msa0747060:intron | 40.0% | |
!! | TATTTTTGTTGGCTGCCGAA+GGG | + | chr5_1:70713874-70713893 | None:intergenic | 40.0% |
!!! | TTATTTTTGTTGGCTGCCGA+AGG | + | chr5_1:70713875-70713894 | None:intergenic | 40.0% |
! | GACAGCAACATCATCAGTTT+TGG | + | chr5_1:70713970-70713989 | None:intergenic | 40.0% |
! | AAAGTATCTGGATGTGGTGA+TGG | + | chr5_1:70714045-70714064 | None:intergenic | 40.0% |
TTTGATCGCAAATGAAGTGG+TGG | + | chr5_1:70714145-70714164 | None:intergenic | 40.0% | |
TGTCATTAATGGTGTGGTGT+CGG | + | chr5_1:70714214-70714233 | None:intergenic | 40.0% | |
!! | AGATTGCGAGGTGTCATTAA+TGG | + | chr5_1:70714225-70714244 | None:intergenic | 40.0% |
GTTCTTGCTAATAGATTGCG+AGG | + | chr5_1:70714237-70714256 | None:intergenic | 40.0% | |
! | TATGTACAAGGTGTTAGCGA+AGG | + | chr5_1:70714259-70714278 | None:intergenic | 40.0% |
TGGTGGAATTTCATCGGAAT+GGG | + | chr5_1:70714383-70714402 | None:intergenic | 40.0% | |
TTGGTGGAATTTCATCGGAA+TGG | + | chr5_1:70714384-70714403 | None:intergenic | 40.0% | |
CTTAACAAGGCCGTTTACTA+CGG | + | chr5_1:70714526-70714545 | None:intergenic | 40.0% | |
CCGCTTCAGTAAAAGAAAGT+TGG | - | chr5_1:70714550-70714569 | Msa0747060:intron | 40.0% | |
TCTTCGCATTATAGATCGAG+TGG | + | chr5_1:70714612-70714631 | None:intergenic | 40.0% | |
ACGACATAATGCTATCAGTG+TGG | + | chr5_1:70714700-70714719 | None:intergenic | 40.0% | |
TGATAGCATTATGTCGTCGT+CGG | - | chr5_1:70714703-70714722 | Msa0747060:intron | 40.0% | |
ATCCATACTATCACAAGGCA+TGG | + | chr5_1:70715171-70715190 | None:intergenic | 40.0% | |
CAGTCATATGTTGAAAGGCA+AGG | - | chr5_1:70715305-70715324 | Msa0747060:intron | 40.0% | |
CACCAAGATTTGCATCAAAC+TGG | - | chr5_1:70715503-70715522 | Msa0747060:intron | 40.0% | |
CCGGTTCAAGATGTTAGTTA+AGG | - | chr5_1:70715779-70715798 | Msa0747060:intron | 40.0% | |
GGGTACACTTGCATAAGTAA+AGG | + | chr5_1:70716052-70716071 | None:intergenic | 40.0% | |
!! | CATCTGATGATGGGTCTAAA+TGG | - | chr5_1:70716502-70716521 | Msa0747060:intron | 40.0% |
!! | TCTGATGATGGGTCTAAATG+GGG | - | chr5_1:70716504-70716523 | Msa0747060:intron | 40.0% |
! | AAATGGGGGCATGTGAAAAA+AGG | - | chr5_1:70716519-70716538 | Msa0747060:intron | 40.0% |
TGTGCTAGTGAGTTAATTCG+TGG | - | chr5_1:70716723-70716742 | Msa0747060:intron | 40.0% | |
!! | GAGCTTGTTAATCTCAGTTC+TGG | - | chr5_1:70716854-70716873 | Msa0747060:intron | 40.0% |
GAAACACCCGACTCTTTGTA+TGG | + | chr5_1:70712162-70712181 | None:intergenic | 45.0% | |
GTTGCTTCGATTTCAGCCAT+AGG | - | chr5_1:70712213-70712232 | Msa0747060:CDS | 45.0% | |
!!! | ATTTTACTAAGATGGCGGGC+TGG | + | chr5_1:70712379-70712398 | None:intergenic | 45.0% |
GTGACACATCTAGAGAGCTT+TGG | + | chr5_1:70712469-70712488 | None:intergenic | 45.0% | |
!! | TGAAAGTGTCTCTGATGGCT+TGG | + | chr5_1:70712622-70712641 | None:intergenic | 45.0% |
GCCATCAGAGACACTTTCAA+CGG | - | chr5_1:70712623-70712642 | Msa0747060:intron | 45.0% | |
CCATCAGAGACACTTTCAAC+GGG | - | chr5_1:70712624-70712643 | Msa0747060:intron | 45.0% | |
GGATCCTGTTCATGGTTACA+CGG | + | chr5_1:70712732-70712751 | None:intergenic | 45.0% | |
!! | TTGGGAGGAGGAAAGTGTTA+GGG | + | chr5_1:70712822-70712841 | None:intergenic | 45.0% |
TGACAGCCAGATCAAAAAGG+CGG | - | chr5_1:70712927-70712946 | Msa0747060:intron | 45.0% | |
!! | TTTGGTTTGACTGTTGGGTG+GGG | + | chr5_1:70712979-70712998 | None:intergenic | 45.0% |
!!! | GTTTTGGTTTGACTGTTGGG+TGG | + | chr5_1:70712981-70713000 | None:intergenic | 45.0% |
GATATGTCGTGTCCAAGATG+GGG | + | chr5_1:70713074-70713093 | None:intergenic | 45.0% | |
CGATATGTCGTGTCCAAGAT+GGG | + | chr5_1:70713075-70713094 | None:intergenic | 45.0% | |
ACGATATGTCGTGTCCAAGA+TGG | + | chr5_1:70713076-70713095 | None:intergenic | 45.0% | |
!! | GGAATGGTTCTAATTGGTGG+AGG | + | chr5_1:70713099-70713118 | None:intergenic | 45.0% |
!!! | AGTTTTGAAAGCCCGCTATG+GGG | + | chr5_1:70713152-70713171 | None:intergenic | 45.0% |
!! | GTTTTTCTAAGGAGGAAGGG+GGG | + | chr5_1:70713267-70713286 | None:intergenic | 45.0% |
CAGACTTCAGCAATACCAGA+CGG | - | chr5_1:70713435-70713454 | Msa0747060:intron | 45.0% | |
!! | TTGGTGATGAACTGTCGCAA+GGG | + | chr5_1:70713593-70713612 | None:intergenic | 45.0% |
!! | TTTGGTGATGAACTGTCGCA+AGG | + | chr5_1:70713594-70713613 | None:intergenic | 45.0% |
!!! | TGTGTTGCTTTTGTTCGAGG+AGG | + | chr5_1:70713696-70713715 | None:intergenic | 45.0% |
! | GCGCAACTGTTTAATGGGTA+TGG | + | chr5_1:70713821-70713840 | None:intergenic | 45.0% |
! | TGGAGGCGCAACTGTTTAAT+GGG | + | chr5_1:70713826-70713845 | None:intergenic | 45.0% |
! | TGTGTTGATGCAAGCTATGG+TGG | + | chr5_1:70713846-70713865 | None:intergenic | 45.0% |
CGCAATCAACGTTTGTCAGA+GGG | + | chr5_1:70714188-70714207 | None:intergenic | 45.0% | |
ACGCAATCAACGTTTGTCAG+AGG | + | chr5_1:70714189-70714208 | None:intergenic | 45.0% | |
! | GTTAGTGGGGAGTATGTACA+AGG | + | chr5_1:70714271-70714290 | None:intergenic | 45.0% |
ATACTCCCCACTAACGAGAT+AGG | - | chr5_1:70714276-70714295 | Msa0747060:intron | 45.0% | |
! | CTCAACGGTTGACTGATTTC+CGG | + | chr5_1:70714302-70714321 | None:intergenic | 45.0% |
!! | CGAAGGTATCTAGTCCTCAA+CGG | + | chr5_1:70714317-70714336 | None:intergenic | 45.0% |
CGTTGAGGACTAGATACCTT+CGG | - | chr5_1:70714315-70714334 | Msa0747060:intron | 45.0% | |
GTTGAGGACTAGATACCTTC+GGG | - | chr5_1:70714316-70714335 | Msa0747060:intron | 45.0% | |
CGGAATGGGAAGCTTTCAAA+AGG | + | chr5_1:70714369-70714388 | None:intergenic | 45.0% | |
TGTGACAGTTACAAGAGTCC+TGG | + | chr5_1:70714477-70714496 | None:intergenic | 45.0% | |
AGAAGTGAAGCAAGCGGTTT+GGG | + | chr5_1:70714502-70714521 | None:intergenic | 45.0% | |
AAGAAGTGAAGCAAGCGGTT+TGG | + | chr5_1:70714503-70714522 | None:intergenic | 45.0% | |
TACGGAAGAAGTGAAGCAAG+CGG | + | chr5_1:70714508-70714527 | None:intergenic | 45.0% | |
CACCTCGGCCAATTATTGAA+GGG | + | chr5_1:70714587-70714606 | None:intergenic | 45.0% | |
ACACCTCGGCCAATTATTGA+AGG | + | chr5_1:70714588-70714607 | None:intergenic | 45.0% | |
ATAGATCGAGTGGAACACCT+CGG | + | chr5_1:70714602-70714621 | None:intergenic | 45.0% | |
GATAGCATTATGTCGTCGTC+GGG | - | chr5_1:70714704-70714723 | Msa0747060:intron | 45.0% | |
CACCATGCCTTGTGATAGTA+TGG | - | chr5_1:70715166-70715185 | Msa0747060:intron | 45.0% | |
GTATCTAACCTTCTTCGGAG+TGG | - | chr5_1:70715254-70715273 | Msa0747060:intron | 45.0% | |
AAGGTCATGCACCAATTGAC+TGG | - | chr5_1:70715324-70715343 | Msa0747060:intron | 45.0% | |
AGGTCATGCACCAATTGACT+GGG | - | chr5_1:70715325-70715344 | Msa0747060:intron | 45.0% | |
CGATGCAAATCCCAGTCAAT+TGG | + | chr5_1:70715338-70715357 | None:intergenic | 45.0% | |
CAGGGTGATGAACGTAATGA+GGG | - | chr5_1:70715407-70715426 | Msa0747060:intron | 45.0% | |
AGCCATTAACAGACCTTCAC+CGG | - | chr5_1:70715439-70715458 | Msa0747060:intron | 45.0% | |
!! | TGCAAATCTTGGTGCCAAAG+TGG | + | chr5_1:70715497-70715516 | None:intergenic | 45.0% |
!! | TTTTGATTCTGACTGGGAGC+AGG | - | chr5_1:70716118-70716137 | Msa0747060:intron | 45.0% |
GATATGGCAAGACTTCAGCA+AGG | - | chr5_1:70716170-70716189 | Msa0747060:intron | 45.0% | |
AAGGCATGAATCACATGCAG+AGG | - | chr5_1:70716189-70716208 | Msa0747060:intron | 45.0% | |
GAATCACATGCAGAGGATGT+TGG | - | chr5_1:70716196-70716215 | Msa0747060:intron | 45.0% | |
TTCCAGTTGCATATCCATGC+AGG | + | chr5_1:70716225-70716244 | None:intergenic | 45.0% | |
ATTGCAGAGATCTGTCAGAC+AGG | - | chr5_1:70716244-70716263 | Msa0747060:intron | 45.0% | |
!! | TATTTGCAGGATTGGCTGCT+GGG | - | chr5_1:70716478-70716497 | Msa0747060:intron | 45.0% |
!! | CTGATGATGGGTCTAAATGG+GGG | - | chr5_1:70716505-70716524 | Msa0747060:intron | 45.0% |
GCTAGTGAGTTAATTCGTGG+AGG | - | chr5_1:70716726-70716745 | Msa0747060:intron | 45.0% | |
AGTGAGTTAATTCGTGGAGG+AGG | - | chr5_1:70716729-70716748 | Msa0747060:intron | 45.0% | |
!!! | TTTTTAAAAAAAAAAATTTG+GGG | + | chr5_1:70713340-70713359 | None:intergenic | 5.0% |
!! | TAAAAAAAAAACTAATATAT+GGG | + | chr5_1:70716632-70716651 | None:intergenic | 5.0% |
!! | ATAAAAAAAAAACTAATATA+TGG | + | chr5_1:70716633-70716652 | None:intergenic | 5.0% |
AACCTGCACAAGGTGTGCAA+AGG | - | chr5_1:70712053-70712072 | Msa0747060:intron | 50.0% | |
GACAGCTGGGTGTGGAATTA+TGG | + | chr5_1:70712519-70712538 | None:intergenic | 50.0% | |
ATACCATGTGTGCGACAGCT+GGG | + | chr5_1:70712532-70712551 | None:intergenic | 50.0% | |
!! | CCCGTTGAAAGTGTCTCTGA+TGG | + | chr5_1:70712627-70712646 | None:intergenic | 50.0% |
ATCGTCCACACAAGACCTGT+CGG | - | chr5_1:70712664-70712683 | Msa0747060:intron | 50.0% | |
TGGAGGTTGGATCCTGTTCA+TGG | + | chr5_1:70712740-70712759 | None:intergenic | 50.0% | |
TGACTCTTGGAGATGGAGGT+TGG | + | chr5_1:70712753-70712772 | None:intergenic | 50.0% | |
!! | CTTGGGAGGAGGAAAGTGTT+AGG | + | chr5_1:70712823-70712842 | None:intergenic | 50.0% |
TATGTGGAGGTTGAGGTGGA+CGG | + | chr5_1:70712885-70712904 | None:intergenic | 50.0% | |
AGGATATGTGGAGGTTGAGG+TGG | + | chr5_1:70712889-70712908 | None:intergenic | 50.0% | |
TGGAGGATATGTGGAGGTTG+AGG | + | chr5_1:70712892-70712911 | None:intergenic | 50.0% | |
! | AGTGTTCGGTGGAGGATATG+TGG | + | chr5_1:70712901-70712920 | None:intergenic | 50.0% |
!! | TGTCAGTAAGGAGTGTTCGG+TGG | + | chr5_1:70712912-70712931 | None:intergenic | 50.0% |
!! | GGCTGTCAGTAAGGAGTGTT+CGG | + | chr5_1:70712915-70712934 | None:intergenic | 50.0% |
GACAGCCAGATCAAAAAGGC+GGG | - | chr5_1:70712928-70712947 | Msa0747060:intron | 50.0% | |
ACAGCCAGATCAAAAAGGCG+GGG | - | chr5_1:70712929-70712948 | Msa0747060:intron | 50.0% | |
! | GTTTCCCCGCCTTTTTGATC+TGG | + | chr5_1:70712936-70712955 | None:intergenic | 50.0% |
! | TTGGTTTGACTGTTGGGTGG+GGG | + | chr5_1:70712978-70712997 | None:intergenic | 50.0% |
!! | AGGTTGGTGCACGAGAAAGA+GGG | + | chr5_1:70713187-70713206 | None:intergenic | 50.0% |
CTTTGTTGGGGAAGTGGTGT+TGG | + | chr5_1:70713210-70713229 | None:intergenic | 50.0% | |
AAAAATTTGGGGGGGTGGTG+AGG | + | chr5_1:70713329-70713348 | None:intergenic | 50.0% | |
AGTAAACCGGAAGAGAGGAC+AGG | - | chr5_1:70713411-70713430 | Msa0747060:intron | 50.0% | |
!! | TTTGTCTTTTGGTGGCCGTC+TGG | + | chr5_1:70713453-70713472 | None:intergenic | 50.0% |
GTTCATCACCAAAGCAGCCT+CGG | - | chr5_1:70713601-70713620 | Msa0747060:intron | 50.0% | |
TCCTGAATCTTGGTTGTCCG+AGG | + | chr5_1:70713621-70713640 | None:intergenic | 50.0% | |
!!! | TTTTGTTCGAGGAGGTGTCG+GGG | + | chr5_1:70713688-70713707 | None:intergenic | 50.0% |
!!! | CTTTTGTTCGAGGAGGTGTC+GGG | + | chr5_1:70713689-70713708 | None:intergenic | 50.0% |
!! | GCTTTTGTTCGAGGAGGTGT+CGG | + | chr5_1:70713690-70713709 | None:intergenic | 50.0% |
!!! | GGCTGTGTTGCTTTTGTTCG+AGG | + | chr5_1:70713699-70713718 | None:intergenic | 50.0% |
! | GTGGAGGCGCAACTGTTTAA+TGG | + | chr5_1:70713827-70713846 | None:intergenic | 50.0% |
GTTGATGCAAGCTATGGTGG+AGG | + | chr5_1:70713843-70713862 | None:intergenic | 50.0% | |
ATTGAGAGGGGTCTTCGTCA+AGG | + | chr5_1:70713917-70713936 | None:intergenic | 50.0% | |
! | GAAGCGAAGCGCTTGAATGA+AGG | + | chr5_1:70714120-70714139 | None:intergenic | 50.0% |
!! | GCGAGGTGTCATTAATGGTG+TGG | + | chr5_1:70714220-70714239 | None:intergenic | 50.0% |
TTCCGGCCTATCTCGTTAGT+GGG | + | chr5_1:70714285-70714304 | None:intergenic | 50.0% | |
TTTCCGGCCTATCTCGTTAG+TGG | + | chr5_1:70714286-70714305 | None:intergenic | 50.0% | |
CGGAAATCAGTCAACCGTTG+AGG | - | chr5_1:70714300-70714319 | Msa0747060:intron | 50.0% | |
AATCCGAAGTGCACACCATC+TGG | - | chr5_1:70714450-70714469 | Msa0747060:intron | 50.0% | |
TACAAGAGTCCTGGACCAGA+TGG | + | chr5_1:70714468-70714487 | None:intergenic | 50.0% | |
CTGAAGCGGGAAGCTTAACA+AGG | + | chr5_1:70714539-70714558 | None:intergenic | 50.0% | |
AGCCCTTCAATAATTGGCCG+AGG | - | chr5_1:70714582-70714601 | Msa0747060:intron | 50.0% | |
! | TCCAACTGGCATTGGAGAGA+TGG | - | chr5_1:70714992-70715011 | Msa0747060:intron | 50.0% |
TCCATCTCTCCAATGCCAGT+TGG | + | chr5_1:70714996-70715015 | None:intergenic | 50.0% | |
CTATCACAAGGCATGGTGCA+TGG | + | chr5_1:70715164-70715183 | None:intergenic | 50.0% | |
GAGTGGTTTCCGTGAAAGTC+TGG | - | chr5_1:70715271-70715290 | Msa0747060:intron | 50.0% | |
GTTCATCACCCTGCTGATCA+GGG | + | chr5_1:70715400-70715419 | None:intergenic | 50.0% | |
GCAGGGTGATGAACGTAATG+AGG | - | chr5_1:70715406-70715425 | Msa0747060:intron | 50.0% | |
CACCGGTGAAGGTCTGTTAA+TGG | + | chr5_1:70715444-70715463 | None:intergenic | 50.0% | |
!! | TCTTGGTGCCAAAGTGGTTG+TGG | + | chr5_1:70715491-70715510 | None:intergenic | 50.0% |
CACAATTTCAGAGCGGTGCA+TGG | + | chr5_1:70715543-70715562 | None:intergenic | 50.0% | |
ATTCTGACTGGGAGCAGGAA+TGG | - | chr5_1:70716123-70716142 | Msa0747060:intron | 50.0% | |
TTCTGACTGGGAGCAGGAAT+GGG | - | chr5_1:70716124-70716143 | Msa0747060:intron | 50.0% | |
TCACATGCAGAGGATGTTGG+AGG | - | chr5_1:70716199-70716218 | Msa0747060:intron | 50.0% | |
AACCGCTCAGCTGGTGAAAA+TGG | - | chr5_1:70716284-70716303 | Msa0747060:intron | 50.0% | |
! | CACCATTTTCACCAGCTGAG+CGG | + | chr5_1:70716289-70716308 | None:intergenic | 50.0% |
!! | CTATTTGCAGGATTGGCTGC+TGG | - | chr5_1:70716477-70716496 | Msa0747060:intron | 50.0% |
CTGCTGGGACATCTGATGAT+GGG | - | chr5_1:70716493-70716512 | Msa0747060:intron | 50.0% | |
ACAATTGGCGCTCGGCATAA+AGG | + | chr5_1:70716762-70716781 | None:intergenic | 50.0% | |
GCTCTGACCACCTCAACAAT+TGG | + | chr5_1:70716777-70716796 | None:intergenic | 50.0% | |
!! | TCTCAGTTCTGGATGTCTCG+AGG | - | chr5_1:70716865-70716884 | Msa0747060:intron | 50.0% |
GTCCTTTGCACACCTTGTGC+AGG | + | chr5_1:70712058-70712077 | None:intergenic | 55.0% | |
GATACCATGTGTGCGACAGC+TGG | + | chr5_1:70712533-70712552 | None:intergenic | 55.0% | |
GGACGATGTGTGGCACAAAC+AGG | + | chr5_1:70712651-70712670 | None:intergenic | 55.0% | |
! | GGTCTTGTGTGGACGATGTG+TGG | + | chr5_1:70712661-70712680 | None:intergenic | 55.0% |
! | TACTGCCGACAGGTCTTGTG+TGG | + | chr5_1:70712672-70712691 | None:intergenic | 55.0% |
ACTCAGGTAGTACTGCCGAC+AGG | + | chr5_1:70712682-70712701 | None:intergenic | 55.0% | |
CGCACCGTGTAACCATGAAC+AGG | - | chr5_1:70712725-70712744 | Msa0747060:intron | 55.0% | |
! | TCGTCTGTTAGCTTGGGAGG+AGG | + | chr5_1:70712834-70712853 | None:intergenic | 55.0% |
! | ACGTCGTCTGTTAGCTTGGG+AGG | + | chr5_1:70712837-70712856 | None:intergenic | 55.0% |
! | GCGACGTCGTCTGTTAGCTT+GGG | + | chr5_1:70712840-70712859 | None:intergenic | 55.0% |
! | GTTCGGTGGAGGATATGTGG+AGG | + | chr5_1:70712898-70712917 | None:intergenic | 55.0% |
!! | CAGTAAGGAGTGTTCGGTGG+AGG | + | chr5_1:70712909-70712928 | None:intergenic | 55.0% |
TGTCGTGTCCAAGATGGGGT+GGG | + | chr5_1:70713070-70713089 | None:intergenic | 55.0% | |
ATGTCGTGTCCAAGATGGGG+TGG | + | chr5_1:70713071-70713090 | None:intergenic | 55.0% | |
TTGAGGGAGGGGGATAGGAA+TGG | + | chr5_1:70713115-70713134 | None:intergenic | 55.0% | |
TTTGAAAGCCCGCTATGGGG+AGG | + | chr5_1:70713149-70713168 | None:intergenic | 55.0% | |
! | GGTTGGTGCACGAGAAAGAG+GGG | + | chr5_1:70713186-70713205 | None:intergenic | 55.0% |
!! | GAGGTTGGTGCACGAGAAAG+AGG | + | chr5_1:70713188-70713207 | None:intergenic | 55.0% |
! | TGTTGGGGAAGTGGTGTTGG+AGG | + | chr5_1:70713207-70713226 | None:intergenic | 55.0% |
GGGTTGGGGGTTAGAAAGGT+GGG | + | chr5_1:70713247-70713266 | None:intergenic | 55.0% | |
TCTAAGGAGGAAGGGGGGTT+GGG | + | chr5_1:70713262-70713281 | None:intergenic | 55.0% | |
! | TTCTAAGGAGGAAGGGGGGT+TGG | + | chr5_1:70713263-70713282 | None:intergenic | 55.0% |
!! | ACCTGCAGGGGCTCTGAAAA+AGG | - | chr5_1:70713382-70713401 | Msa0747060:intron | 55.0% |
!!! | TCCTTTTTCAGAGCCCCTGC+AGG | + | chr5_1:70713386-70713405 | None:intergenic | 55.0% |
GTCTGTCCTGTCCTCTCTTC+CGG | + | chr5_1:70713420-70713439 | None:intergenic | 55.0% | |
TTGGTTGTCCGAGGCTGCTT+TGG | + | chr5_1:70713612-70713631 | None:intergenic | 55.0% | |
GCCTCGGACAACCAAGATTC+AGG | - | chr5_1:70713617-70713636 | Msa0747060:intron | 55.0% | |
TCCCCACTAACGAGATAGGC+CGG | - | chr5_1:70714280-70714299 | Msa0747060:intron | 55.0% | |
TCCGGCCTATCTCGTTAGTG+GGG | + | chr5_1:70714284-70714303 | None:intergenic | 55.0% | |
GGACCAGATGGTGTGCACTT+CGG | + | chr5_1:70714456-70714475 | None:intergenic | 55.0% | |
AAGTGCACACCATCTGGTCC+AGG | - | chr5_1:70714456-70714475 | Msa0747060:intron | 55.0% | |
CACGGAAACCACTCCGAAGA+AGG | + | chr5_1:70715265-70715284 | None:intergenic | 55.0% | |
TGCTGATCAGGGTCTCGTTC+CGG | + | chr5_1:70715389-70715408 | None:intergenic | 55.0% | |
GAACGAGACCCTGATCAGCA+GGG | - | chr5_1:70715389-70715408 | Msa0747060:intron | 55.0% | |
CGTTCATCACCCTGCTGATC+AGG | + | chr5_1:70715401-70715420 | None:intergenic | 55.0% | |
ACTGGTGGAGAAGGCAACAC+CGG | + | chr5_1:70715461-70715480 | None:intergenic | 55.0% | |
! | TGGTGCCAAAGTGGTTGTGG+CGG | + | chr5_1:70715488-70715507 | None:intergenic | 55.0% |
GGCCTGCATGGATATGCAAC+TGG | - | chr5_1:70716220-70716239 | Msa0747060:intron | 55.0% | |
GCAGAGATCTGTCAGACAGG+AGG | - | chr5_1:70716247-70716266 | Msa0747060:intron | 55.0% | |
TTCACCAGCTGAGCGGTTGA+GGG | + | chr5_1:70716282-70716301 | None:intergenic | 55.0% | |
TTTCACCAGCTGAGCGGTTG+AGG | + | chr5_1:70716283-70716302 | None:intergenic | 55.0% | |
GCTGCTGGGACATCTGATGA+TGG | - | chr5_1:70716492-70716511 | Msa0747060:intron | 55.0% | |
ATGCCGAGCGCCAATTGTTG+AGG | - | chr5_1:70716764-70716783 | Msa0747060:intron | 55.0% | |
CCACCTCAACAATTGGCGCT+CGG | + | chr5_1:70716770-70716789 | None:intergenic | 55.0% | |
GATGATCCGCGAGCAGCATC+CGG | - | chr5_1:70711943-70711962 | Msa0747060:CDS | 60.0% | |
ACTCAACCGGATGCTGCTCG+CGG | + | chr5_1:70711952-70711971 | None:intergenic | 60.0% | |
!! | CTAAGATGGCGGGCTGGTCA+AGG | + | chr5_1:70712373-70712392 | None:intergenic | 60.0% |
ATGTGTGCGACAGCTGGGTG+TGG | + | chr5_1:70712527-70712546 | None:intergenic | 60.0% | |
ACACCCAGCTGTCGCACACA+TGG | - | chr5_1:70712526-70712545 | Msa0747060:intron | 60.0% | |
GGCGACGTCGTCTGTTAGCT+TGG | + | chr5_1:70712841-70712860 | None:intergenic | 60.0% | |
! | AAGGAGGTATGGCGTGGGAG+TGG | + | chr5_1:70712862-70712881 | None:intergenic | 60.0% |
! | GACGGAAGGAGGTATGGCGT+GGG | + | chr5_1:70712867-70712886 | None:intergenic | 60.0% |
GAGGTGGACGGAAGGAGGTA+TGG | + | chr5_1:70712873-70712892 | None:intergenic | 60.0% | |
AGGTTGAGGTGGACGGAAGG+AGG | + | chr5_1:70712878-70712897 | None:intergenic | 60.0% | |
TGGAGGTTGAGGTGGACGGA+AGG | + | chr5_1:70712881-70712900 | None:intergenic | 60.0% | |
TCGTGTCCAAGATGGGGTGG+GGG | + | chr5_1:70713068-70713087 | None:intergenic | 60.0% | |
GTCGTGTCCAAGATGGGGTG+GGG | + | chr5_1:70713069-70713088 | None:intergenic | 60.0% | |
AAAGCCCGCTATGGGGAGGT+TGG | + | chr5_1:70713145-70713164 | None:intergenic | 60.0% | |
TGCACGAGAAAGAGGGGCTG+TGG | + | chr5_1:70713180-70713199 | None:intergenic | 60.0% | |
! | GGGGAAGTGGTGTTGGAGGT+TGG | + | chr5_1:70713203-70713222 | None:intergenic | 60.0% |
GGGGTTGGGGGTTAGAAAGG+TGG | + | chr5_1:70713248-70713267 | None:intergenic | 60.0% | |
AGGGGGGTTGGGGGTTAGAA+AGG | + | chr5_1:70713251-70713270 | None:intergenic | 60.0% | |
TAAGGAGGAAGGGGGGTTGG+GGG | + | chr5_1:70713260-70713279 | None:intergenic | 60.0% | |
CTAAGGAGGAAGGGGGGTTG+GGG | + | chr5_1:70713261-70713280 | None:intergenic | 60.0% | |
! | GGGGGGGTGGTGAGGATTTT+AGG | + | chr5_1:70713321-70713340 | None:intergenic | 60.0% |
ATCAGGGTCTCGTTCCGGTG+AGG | + | chr5_1:70715384-70715403 | None:intergenic | 60.0% | |
GGAACGAGACCCTGATCAGC+AGG | - | chr5_1:70715388-70715407 | Msa0747060:intron | 60.0% | |
GGAGAAGGCAACACCGGTGA+AGG | + | chr5_1:70715455-70715474 | None:intergenic | 60.0% | |
TTCCCCCGCCACAACCACTT+TGG | - | chr5_1:70715480-70715499 | Msa0747060:intron | 60.0% | |
TGCCAAAGTGGTTGTGGCGG+GGG | + | chr5_1:70715485-70715504 | None:intergenic | 60.0% | |
GTGCCAAAGTGGTTGTGGCG+GGG | + | chr5_1:70715486-70715505 | None:intergenic | 60.0% | |
GGTGCCAAAGTGGTTGTGGC+GGG | + | chr5_1:70715487-70715506 | None:intergenic | 60.0% | |
GAGGATGTTGGAGGCCTGCA+TGG | - | chr5_1:70716208-70716227 | Msa0747060:intron | 60.0% | |
CCGAGCGCCAATTGTTGAGG+TGG | - | chr5_1:70716767-70716786 | Msa0747060:intron | 60.0% | |
! | GGACGGAAGGAGGTATGGCG+TGG | + | chr5_1:70712868-70712887 | None:intergenic | 65.0% |
! | TGGGGGAGGGTGTAGGGAGT+TGG | + | chr5_1:70713051-70713070 | None:intergenic | 65.0% |
! | ATGGGGTGGGGGAGGGTGTA+GGG | + | chr5_1:70713057-70713076 | None:intergenic | 65.0% |
GTCCAAGATGGGGTGGGGGA+GGG | + | chr5_1:70713064-70713083 | None:intergenic | 65.0% | |
TGTCCAAGATGGGGTGGGGG+AGG | + | chr5_1:70713065-70713084 | None:intergenic | 65.0% | |
!! | TTGGAGGGCGCTTGAGGGAG+GGG | + | chr5_1:70713126-70713145 | None:intergenic | 65.0% |
!! | GTTGGAGGGCGCTTGAGGGA+GGG | + | chr5_1:70713127-70713146 | None:intergenic | 65.0% |
!! | GGAGGTTGGAGGGCGCTTGA+GGG | + | chr5_1:70713131-70713150 | None:intergenic | 65.0% |
GCCCTCCAACCTCCCCATAG+CGG | - | chr5_1:70713137-70713156 | Msa0747060:CDS | 65.0% | |
CCCGCTATGGGGAGGTTGGA+GGG | + | chr5_1:70713141-70713160 | None:intergenic | 65.0% | |
CCCTCCAACCTCCCCATAGC+GGG | - | chr5_1:70713138-70713157 | Msa0747060:CDS | 65.0% | |
!! | CGAGGAGGTGTCGGGGTTGA+AGG | + | chr5_1:70713681-70713700 | None:intergenic | 65.0% |
!! | TACGCCGACTCCTGCCTCAC+CGG | - | chr5_1:70715367-70715386 | Msa0747060:intron | 65.0% |
CGTTCCGGTGAGGCAGGAGT+CGG | + | chr5_1:70715374-70715393 | None:intergenic | 65.0% | |
! | AGTGGTTGTGGCGGGGGAAC+TGG | + | chr5_1:70715479-70715498 | None:intergenic | 65.0% |
! | GATGGGGTGGGGGAGGGTGT+AGG | + | chr5_1:70713058-70713077 | None:intergenic | 70.0% |
CACCCTCCCCCACCCCATCT+TGG | - | chr5_1:70713059-70713078 | Msa0747060:CDS | 70.0% | |
GGCGCTTGAGGGAGGGGGAT+AGG | + | chr5_1:70713120-70713139 | None:intergenic | 70.0% | |
!! | TGGAGGGCGCTTGAGGGAGG+GGG | + | chr5_1:70713125-70713144 | None:intergenic | 70.0% |
!! | GGTTGGAGGGCGCTTGAGGG+AGG | + | chr5_1:70713128-70713147 | None:intergenic | 70.0% |
!! | GGGAGGTTGGAGGGCGCTTG+AGG | + | chr5_1:70713132-70713151 | None:intergenic | 70.0% |
GCCCGCTATGGGGAGGTTGG+AGG | + | chr5_1:70713142-70713161 | None:intergenic | 70.0% | |
GGTGAGGCAGGAGTCGGCGT+AGG | + | chr5_1:70715368-70715387 | None:intergenic | 70.0% | |
GGGTCTCGTTCCGGTGAGGC+AGG | + | chr5_1:70715380-70715399 | None:intergenic | 70.0% | |
GGCGGGGGAACTGGTGGAGA+AGG | + | chr5_1:70715470-70715489 | None:intergenic | 70.0% | |
! | GGTTGTGGCGGGGGAACTGG+TGG | + | chr5_1:70715476-70715495 | None:intergenic | 70.0% |
GCAGCCCTCAACCGCTCAGC+TGG | - | chr5_1:70716275-70716294 | Msa0747060:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 70711474 | 70717037 | 70711474 | ID=Msa0747060;Name=Msa0747060 |
chr5_1 | mRNA | 70711474 | 70717037 | 70711474 | ID=Msa0747060-mRNA-1;Parent=Msa0747060;Name=Msa0747060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.75|0.6|0.8|1|1|5|225|241 |
chr5_1 | exon | 70711474 | 70711816 | 70711474 | ID=Msa0747060-mRNA-1:exon:20852;Parent=Msa0747060-mRNA-1 |
chr5_1 | exon | 70711922 | 70712024 | 70711922 | ID=Msa0747060-mRNA-1:exon:20851;Parent=Msa0747060-mRNA-1 |
chr5_1 | exon | 70712206 | 70712371 | 70712206 | ID=Msa0747060-mRNA-1:exon:20850;Parent=Msa0747060-mRNA-1 |
chr5_1 | exon | 70712952 | 70713264 | 70712952 | ID=Msa0747060-mRNA-1:exon:20849;Parent=Msa0747060-mRNA-1 |
chr5_1 | exon | 70717012 | 70717037 | 70717012 | ID=Msa0747060-mRNA-1:exon:20848;Parent=Msa0747060-mRNA-1 |
chr5_1 | CDS | 70717012 | 70717037 | 70717012 | ID=Msa0747060-mRNA-1:cds;Parent=Msa0747060-mRNA-1 |
chr5_1 | CDS | 70712952 | 70713264 | 70712952 | ID=Msa0747060-mRNA-1:cds;Parent=Msa0747060-mRNA-1 |
chr5_1 | CDS | 70712206 | 70712371 | 70712206 | ID=Msa0747060-mRNA-1:cds;Parent=Msa0747060-mRNA-1 |
chr5_1 | CDS | 70711922 | 70712024 | 70711922 | ID=Msa0747060-mRNA-1:cds;Parent=Msa0747060-mRNA-1 |
chr5_1 | CDS | 70711699 | 70711816 | 70711699 | ID=Msa0747060-mRNA-1:cds;Parent=Msa0747060-mRNA-1 |
chr5_1 | three_prime_UTR | 70711474 | 70711698 | 70711474 | ID=Msa0747060-mRNA-1:three_prime_utr;Parent=Msa0747060-mRNA-1 |
Gene Sequence |
Protein sequence |