Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0762250 | sp|Q9FVC1|SVP_ARATH | 64.246 | 179 | 51 | 2 | 1 | 166 | 62 | 240 | 1.45e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0762250 | G7JXQ9 | 93.976 | 166 | 10 | 0 | 1 | 166 | 62 | 227 | 2.16e-107 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0762250 | 0.804275 | 2.335616e-49 | -8.615850e-47 |
| Msa0036140 | Msa0762250 | 0.802786 | 4.754333e-49 | -8.615850e-47 |
| Msa0043980 | Msa0762250 | 0.820484 | 6.693542e-53 | -8.615850e-47 |
| Msa0045790 | Msa0762250 | 0.805982 | 1.025926e-49 | -8.615850e-47 |
| Msa0046160 | Msa0762250 | 0.802433 | 5.624536e-49 | -8.615850e-47 |
| Msa0051750 | Msa0762250 | 0.813348 | 2.678892e-51 | -8.615850e-47 |
| Msa0054440 | Msa0762250 | 0.809042 | 2.300216e-50 | -8.615850e-47 |
| Msa0054480 | Msa0762250 | 0.829010 | 6.536667e-55 | -8.615850e-47 |
| Msa0084080 | Msa0762250 | 0.801201 | 1.006626e-48 | -8.615850e-47 |
| Msa0084380 | Msa0762250 | 0.800016 | 1.756004e-48 | -8.615850e-47 |
| Msa0090360 | Msa0762250 | 0.830808 | 2.383465e-55 | -8.615850e-47 |
| Msa0095560 | Msa0762250 | 0.809970 | 1.454117e-50 | -8.615850e-47 |
| Msa0100160 | Msa0762250 | 0.800082 | 1.703048e-48 | -8.615850e-47 |
| Msa0112770 | Msa0762250 | 0.804779 | 1.833950e-49 | -8.615850e-47 |
| Msa0114060 | Msa0762250 | 0.813981 | 1.943172e-51 | -8.615850e-47 |
| Msa0610430 | Msa0762250 | 0.802225 | 6.205228e-49 | -8.615850e-47 |
| Msa0612960 | Msa0762250 | 0.814625 | 1.400562e-51 | -8.615850e-47 |
| Msa0613440 | Msa0762250 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0617640 | Msa0762250 | 0.818427 | 1.971463e-52 | -8.615850e-47 |
| Msa0625720 | Msa0762250 | 0.828869 | 7.074062e-55 | -8.615850e-47 |
| Msa0637900 | Msa0762250 | 0.804167 | 2.460087e-49 | -8.615850e-47 |
| Msa0639310 | Msa0762250 | 0.807170 | 5.760447e-50 | -8.615850e-47 |
| Msa0643180 | Msa0762250 | 0.809197 | 2.131656e-50 | -8.615850e-47 |
| Msa0663390 | Msa0762250 | 0.839131 | 1.903535e-57 | -8.615850e-47 |
| Msa0667050 | Msa0762250 | 0.806723 | 7.161817e-50 | -8.615850e-47 |
| Msa0682840 | Msa0762250 | 0.802134 | 6.479457e-49 | -8.615850e-47 |
| Msa0696390 | Msa0762250 | 0.803116 | 4.065320e-49 | -8.615850e-47 |
| Msa0709160 | Msa0762250 | 0.800570 | 1.354374e-48 | -8.615850e-47 |
| Msa0711780 | Msa0762250 | 0.831798 | 1.361147e-55 | -8.615850e-47 |
| Msa0729510 | Msa0762250 | 0.811988 | 5.313963e-51 | -8.615850e-47 |
| Msa0750170 | Msa0762250 | 0.811207 | 7.858332e-51 | -8.615850e-47 |
| Msa0762250 | Msa0762970 | 0.844821 | 5.960105e-59 | -8.615850e-47 |
| Msa0762250 | Msa0764570 | 0.807924 | 3.985313e-50 | -8.615850e-47 |
| Msa0762250 | Msa0767300 | 0.814949 | 1.186947e-51 | -8.615850e-47 |
| Msa0762250 | Msa0790510 | 0.824194 | 9.210960e-54 | -8.615850e-47 |
| Msa0762250 | Msa0794670 | 0.824642 | 7.226305e-54 | -8.615850e-47 |
| Msa0762250 | Msa0794730 | 0.820932 | 5.281491e-53 | -8.615850e-47 |
| Msa0762250 | Msa0804730 | 0.872516 | 2.995412e-67 | -8.615850e-47 |
| Msa0762250 | Msa0808270 | 0.827199 | 1.785257e-54 | -8.615850e-47 |
| Msa0762250 | Msa0816700 | 0.808011 | 3.819332e-50 | -8.615850e-47 |
| Msa0762250 | Msa0816710 | 0.802234 | 6.179993e-49 | -8.615850e-47 |
| Msa0762250 | Msa0830540 | 0.807862 | 4.108865e-50 | -8.615850e-47 |
| Msa0762250 | Msa0831850 | 0.802748 | 4.841946e-49 | -8.615850e-47 |
| Msa0762250 | Msa0842790 | 0.814190 | 1.747815e-51 | -8.615850e-47 |
| Msa0762250 | Msa0847900 | 0.857895 | 1.195216e-62 | -8.615850e-47 |
| Msa0762250 | Msa0896750 | 0.804231 | 2.385851e-49 | -8.615850e-47 |
| Msa0762250 | Msa0898750 | 0.822784 | 1.967954e-53 | -8.615850e-47 |
| Msa0762250 | Msa0928130 | 0.816976 | 4.187948e-52 | -8.615850e-47 |
| Msa0762250 | Msa0964310 | 0.806124 | 9.579377e-50 | -8.615850e-47 |
| Msa0762250 | Msa0968680 | 0.807681 | 4.487583e-50 | -8.615850e-47 |
| Msa0762250 | Msa0969520 | 0.814326 | 1.631379e-51 | -8.615850e-47 |
| Msa0762250 | Msa0969810 | 0.809511 | 1.825522e-50 | -8.615850e-47 |
| Msa0762250 | Msa0973600 | 0.820706 | 5.952889e-53 | -8.615850e-47 |
| Msa0762250 | Msa0980880 | 0.818418 | 1.980297e-52 | -8.615850e-47 |
| Msa0762250 | Msa0999100 | 0.820385 | 7.054887e-53 | -8.615850e-47 |
| Msa0762250 | Msa1035480 | 0.804471 | 2.126149e-49 | -8.615850e-47 |
| Msa0762250 | Msa1041730 | 0.803804 | 2.927465e-49 | -8.615850e-47 |
| Msa0762250 | Msa1085200 | 0.812901 | 3.357765e-51 | -8.615850e-47 |
| Msa0762250 | Msa1098400 | 0.801219 | 9.982688e-49 | -8.615850e-47 |
| Msa0762250 | Msa1098420 | 0.803062 | 4.169383e-49 | -8.615850e-47 |
| Msa0762250 | Msa1109680 | 0.806624 | 7.515832e-50 | -8.615850e-47 |
| Msa0762250 | Msa1110190 | 0.808007 | 3.826339e-50 | -8.615850e-47 |
| Msa0762250 | Msa1111870 | 0.817226 | 3.681121e-52 | -8.615850e-47 |
| Msa0762250 | Msa1115430 | 0.812793 | 3.544885e-51 | -8.615850e-47 |
| Msa0762250 | Msa1126450 | 0.817840 | 2.676594e-52 | -8.615850e-47 |
| Msa0762250 | Msa1130530 | 0.800286 | 1.547369e-48 | -8.615850e-47 |
| Msa0762250 | Msa1131220 | 0.806006 | 1.014455e-49 | -8.615850e-47 |
| Msa0762250 | Msa1147900 | 0.814307 | 1.646882e-51 | -8.615850e-47 |
| Msa0762250 | Msa1154280 | 0.835708 | 1.433835e-56 | -8.615850e-47 |
| Msa0762250 | Msa1162780 | 0.804151 | 2.479464e-49 | -8.615850e-47 |
| Msa0762250 | Msa1199570 | 0.802972 | 4.352243e-49 | -8.615850e-47 |
| Msa0762250 | Msa1201560 | 0.810565 | 1.082148e-50 | -8.615850e-47 |
| Msa0762250 | Msa1204630 | 0.802975 | 4.347029e-49 | -8.615850e-47 |
| Msa0762250 | Msa1214890 | 0.802926 | 4.448499e-49 | -8.615850e-47 |
| Msa0762250 | Msa1219010 | 0.840581 | 7.976097e-58 | -8.615850e-47 |
| Msa0762250 | Msa1237980 | 0.802782 | 4.765296e-49 | -8.615850e-47 |
| Msa0762250 | Msa1297290 | 0.812995 | 3.201459e-51 | -8.615850e-47 |
| Msa0762250 | Msa1305340 | 0.816162 | 6.374075e-52 | -8.615850e-47 |
| Msa0762250 | Msa1328710 | 0.803776 | 2.965616e-49 | -8.615850e-47 |
| Msa0762250 | Msa1340650 | 0.803684 | 3.099788e-49 | -8.615850e-47 |
| Msa0762250 | Msa1349520 | 0.803114 | 4.068324e-49 | -8.615850e-47 |
| Msa0762250 | Msa1353470 | 0.801103 | 1.054625e-48 | -8.615850e-47 |
| Msa0762250 | Msa1353980 | 0.812692 | 3.731039e-51 | -8.615850e-47 |
| Msa0762250 | Msa1356510 | 0.803806 | 2.923941e-49 | -8.615850e-47 |
| Msa0762250 | Msa1359040 | 0.831167 | 1.945593e-55 | -8.615850e-47 |
| Msa0762250 | Msa1359560 | 0.803317 | 3.693564e-49 | -8.615850e-47 |
| Msa0762250 | Msa1368430 | 0.806105 | 9.668541e-50 | -8.615850e-47 |
| Msa0762250 | Msa1371240 | 0.814930 | 1.198841e-51 | -8.615850e-47 |
| Msa0762250 | Msa1375840 | 0.844154 | 9.009407e-59 | -8.615850e-47 |
| Msa0762250 | Msa1376170 | 0.801112 | 1.049929e-48 | -8.615850e-47 |
| Msa0762250 | Msa1377820 | 0.805470 | 1.314251e-49 | -8.615850e-47 |
| Msa0762250 | Msa1385000 | 0.813130 | 2.990833e-51 | -8.615850e-47 |
| Msa0762250 | Msa1392260 | 0.810731 | 9.961079e-51 | -8.615850e-47 |
| Msa0762250 | Msa1397120 | 0.812531 | 4.044693e-51 | -8.615850e-47 |
| Msa0762250 | Msa1403890 | 0.812172 | 4.846967e-51 | -8.615850e-47 |
| Msa0762250 | Msa1409880 | 0.804619 | 1.980424e-49 | -8.615850e-47 |
| Msa0762250 | Msa1429900 | 0.803206 | 3.893962e-49 | -8.615850e-47 |
| Msa0762250 | Msa1433390 | 0.830474 | 2.877990e-55 | -8.615850e-47 |
| Msa0762250 | Msa1443850 | 0.808450 | 3.079176e-50 | -8.615850e-47 |
| Msa0762250 | Msa1454620 | 0.830811 | 2.379233e-55 | -8.615850e-47 |
| Msa0762250 | Msa1457920 | 0.813418 | 2.584960e-51 | -8.615850e-47 |
| Msa0762250 | Msa1466540 | 0.819897 | 9.124966e-53 | -8.615850e-47 |
| Msa0137840 | Msa0762250 | 0.828588 | 8.271624e-55 | -8.615850e-47 |
| Msa0138020 | Msa0762250 | 0.806804 | 6.884298e-50 | -8.615850e-47 |
| Msa0151180 | Msa0762250 | 0.814004 | 1.921199e-51 | -8.615850e-47 |
| Msa0159930 | Msa0762250 | 0.806824 | 6.818364e-50 | -8.615850e-47 |
| Msa0160550 | Msa0762250 | 0.807428 | 5.079614e-50 | -8.615850e-47 |
| Msa0170140 | Msa0762250 | 0.800212 | 1.602196e-48 | -8.615850e-47 |
| Msa0170570 | Msa0762250 | 0.813282 | 2.769441e-51 | -8.615850e-47 |
| Msa0171120 | Msa0762250 | 0.805540 | 1.270496e-49 | -8.615850e-47 |
| Msa0171540 | Msa0762250 | 0.803915 | 2.775922e-49 | -8.615850e-47 |
| Msa0173390 | Msa0762250 | 0.823967 | 1.041516e-53 | -8.615850e-47 |
| Msa0178930 | Msa0762250 | 0.803719 | 3.047778e-49 | -8.615850e-47 |
| Msa0184040 | Msa0762250 | 0.829917 | 3.935558e-55 | -8.615850e-47 |
| Msa0188830 | Msa0762250 | 0.801658 | 8.115837e-49 | -8.615850e-47 |
| Msa0206010 | Msa0762250 | 0.803159 | 3.981394e-49 | -8.615850e-47 |
| Msa0210450 | Msa0762250 | 0.802542 | 5.340871e-49 | -8.615850e-47 |
| Msa0366240 | Msa0762250 | 0.812098 | 5.029235e-51 | -8.615850e-47 |
| Msa0367870 | Msa0762250 | 0.810339 | 1.210594e-50 | -8.615850e-47 |
| Msa0379640 | Msa0762250 | 0.802868 | 4.572808e-49 | -8.615850e-47 |
| Msa0383800 | Msa0762250 | 0.803069 | 4.157108e-49 | -8.615850e-47 |
| Msa0410650 | Msa0762250 | 0.809473 | 1.859596e-50 | -8.615850e-47 |
| Msa0417270 | Msa0762250 | 0.809777 | 1.599796e-50 | -8.615850e-47 |
| Msa0426900 | Msa0762250 | 0.809542 | 1.797494e-50 | -8.615850e-47 |
| Msa0436760 | Msa0762250 | 0.811646 | 6.309657e-51 | -8.615850e-47 |
| Msa0453200 | Msa0762250 | 0.810026 | 1.414263e-50 | -8.615850e-47 |
| Msa0455760 | Msa0762250 | 0.803359 | 3.619984e-49 | -8.615850e-47 |
| Msa0479970 | Msa0762250 | 0.801584 | 8.405694e-49 | -8.615850e-47 |
| Msa0481530 | Msa0762250 | 0.839792 | 1.281717e-57 | -8.615850e-47 |
| Msa0260680 | Msa0762250 | 0.806783 | 6.956250e-50 | -8.615850e-47 |
| Msa0264690 | Msa0762250 | 0.802380 | 5.765753e-49 | -8.615850e-47 |
| Msa0264780 | Msa0762250 | 0.803450 | 3.466707e-49 | -8.615850e-47 |
| Msa0270100 | Msa0762250 | 0.809541 | 1.798667e-50 | -8.615850e-47 |
| Msa0271530 | Msa0762250 | 0.801683 | 8.022051e-49 | -8.615850e-47 |
| Msa0280090 | Msa0762250 | 0.804127 | 2.507967e-49 | -8.615850e-47 |
| Msa0282250 | Msa0762250 | 0.819013 | 1.451194e-52 | -8.615850e-47 |
| Msa0299330 | Msa0762250 | 0.804307 | 2.299844e-49 | -8.615850e-47 |
| Msa0305700 | Msa0762250 | 0.805053 | 1.607326e-49 | -8.615850e-47 |
| Msa0336420 | Msa0762250 | 0.816745 | 4.720614e-52 | -8.615850e-47 |
| Msa0337620 | Msa0762250 | 0.800640 | 1.310649e-48 | -8.615850e-47 |
| Msa0338110 | Msa0762250 | 0.803142 | 4.013844e-49 | -8.615850e-47 |
| Msa0341540 | Msa0762250 | 0.802880 | 4.547182e-49 | -8.615850e-47 |
| Msa0363790 | Msa0762250 | 0.824000 | 1.022914e-53 | -8.615850e-47 |
| Msa0483850 | Msa0762250 | 0.808032 | 3.779918e-50 | -8.615850e-47 |
| Msa0507680 | Msa0762250 | 0.803688 | 3.094196e-49 | -8.615850e-47 |
| Msa0518380 | Msa0762250 | 0.804561 | 2.036172e-49 | -8.615850e-47 |
| Msa0521670 | Msa0762250 | 0.803955 | 2.723266e-49 | -8.615850e-47 |
| Msa0529890 | Msa0762250 | 0.830179 | 3.398292e-55 | -8.615850e-47 |
| Msa0545070 | Msa0762250 | 0.814060 | 1.867542e-51 | -8.615850e-47 |
| Msa0555450 | Msa0762250 | 0.800604 | 1.332927e-48 | -8.615850e-47 |
| Msa0557070 | Msa0762250 | 0.816160 | 6.379866e-52 | -8.615850e-47 |
| Msa0558230 | Msa0762250 | 0.802676 | 5.009979e-49 | -8.615850e-47 |
| Msa0585560 | Msa0762250 | 0.835555 | 1.567806e-56 | -8.615850e-47 |
| Msa0598160 | Msa0762250 | 0.805362 | 1.384649e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0762250 | MtrunA17_Chr5g0412461 | 93.976 | 166 | 10 | 0 | 1 | 166 | 62 | 227 | 4.15e-111 | 315 |
| Msa0762250 | MtrunA17_Chr5g0412271 | 81.437 | 167 | 30 | 1 | 1 | 166 | 62 | 228 | 4.29e-93 | 270 |
| Msa0762250 | MtrunA17_Chr5g0427401 | 46.108 | 167 | 82 | 5 | 1 | 164 | 62 | 223 | 2.04e-33 | 117 |
| Msa0762250 | MtrunA17_Chr4g0049901 | 38.554 | 166 | 84 | 3 | 1 | 164 | 88 | 237 | 1.01e-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0762250 | AT2G22540.2 | 64.246 | 179 | 51 | 2 | 1 | 166 | 57 | 235 | 9.46e-70 | 211 |
| Msa0762250 | AT2G22540.3 | 64.246 | 179 | 51 | 2 | 1 | 166 | 62 | 240 | 1.47e-69 | 211 |
| Msa0762250 | AT2G22540.1 | 64.246 | 179 | 51 | 2 | 1 | 166 | 62 | 240 | 1.47e-69 | 211 |
| Msa0762250 | AT4G24540.1 | 50.595 | 168 | 66 | 7 | 1 | 163 | 62 | 217 | 3.87e-38 | 130 |
Find 76 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGTAAGTTGACTATTTA+TGG | 0.095568 | 5_2:-20163239 | None:intergenic |
| GAAGGGTGAATTGTACTTTA+TGG | 0.162495 | 5_2:-20163016 | None:intergenic |
| CTCAGACACCTCACTCAAAT+TGG | 0.183454 | 5_2:+20168472 | Msa0762250:CDS |
| CCCTCATCTGCCTTAATTGA+TGG | 0.212199 | 5_2:-20166261 | None:intergenic |
| TTTATGGAGGCGTTGGTATT+TGG | 0.236298 | 5_2:-20163000 | None:intergenic |
| AGTTTAACCAGAACAGTTAA+TGG | 0.243316 | 5_2:+20169729 | Msa0762250:three_prime_UTR |
| TTGGAGAAGTCTCTTGAAAC+TGG | 0.275036 | 5_2:+20166325 | Msa0762250:CDS |
| TAAATGAATTAAACACAAAT+TGG | 0.275099 | 5_2:-20169707 | None:intergenic |
| ATCCAAAAGAGGATAAATTA+AGG | 0.281250 | 5_2:+20163416 | Msa0762250:intron |
| AAGAGAAGAAACTTAGGTTT+TGG | 0.281619 | 5_2:-20162970 | None:intergenic |
| CTCAGAAAAGCCATCAATTA+AGG | 0.306084 | 5_2:+20166251 | Msa0762250:CDS |
| TGTTGTGGGTGGTGAGGGTT+TGG | 0.314850 | 5_2:-20163038 | None:intergenic |
| TATGTATTTGTAATGACTTC+AGG | 0.343086 | 5_2:+20169639 | Msa0762250:three_prime_UTR |
| TCTGGAAGAATTACAACAAT+TGG | 0.380411 | 5_2:+20166306 | Msa0762250:CDS |
| TTTGGACCTGACACTAATTA+GGG | 0.388500 | 5_2:+20165225 | Msa0762250:five_prime_UTR |
| TCAGACACCTCACTCAAATT+GGG | 0.388618 | 5_2:+20168473 | Msa0762250:CDS |
| AGAACCGTCGCTAGAGTTGC+AGG | 0.391211 | 5_2:+20165363 | Msa0762250:CDS |
| AAGAAGAGGATTAATCAAAA+AGG | 0.392982 | 5_2:+20163521 | Msa0762250:five_prime_UTR |
| GAAATTAACTAGTGAAGAAA+TGG | 0.398177 | 5_2:-20163101 | None:intergenic |
| TCCATATGCTGGCTGATAGT+AGG | 0.399710 | 5_2:+20169505 | Msa0762250:exon |
| ACCTGCAGGCTTCCATATGC+TGG | 0.416131 | 5_2:+20169494 | Msa0762250:intron |
| TCTTTGAATACTCCAACTTA+AGG | 0.420420 | 5_2:+20163610 | Msa0762250:five_prime_UTR |
| ACCTACTATCAGCCAGCATA+TGG | 0.423697 | 5_2:-20169506 | None:intergenic |
| GTGGGTGGTGAGGGTTTGGA+AGG | 0.425658 | 5_2:-20163034 | None:intergenic |
| TAGGTGACGGACATGTTTAA+TGG | 0.427034 | 5_2:+20168338 | Msa0762250:intron |
| AATTGTGTTGTGGGTGGTGA+GGG | 0.444309 | 5_2:-20163043 | None:intergenic |
| GAGAAAGAAAGACCTTAAGT+TGG | 0.454100 | 5_2:-20163622 | None:intergenic |
| TCAGGGAGAGAAGATTATGA+TGG | 0.464183 | 5_2:+20166449 | Msa0762250:intron |
| ATTCTTCCAGACTCAAACCT+TGG | 0.464341 | 5_2:-20166294 | None:intergenic |
| TAATATAGAAATTGTGTTGT+GGG | 0.468801 | 5_2:-20163052 | None:intergenic |
| GGATCTCCAAGGTTTGAGTC+TGG | 0.471068 | 5_2:+20166288 | Msa0762250:CDS |
| AATTAAGGTAAAGAAAGATA+TGG | 0.481532 | 5_2:+20163431 | Msa0762250:five_prime_UTR |
| AAGTCTCTTGAAACTGGGTT+GGG | 0.490075 | 5_2:+20166331 | Msa0762250:CDS |
| CACTGAAGAAGGTCAATCTT+CGG | 0.493342 | 5_2:+20168397 | Msa0762250:CDS |
| ATGATAAAGAGAAGAAACTT+AGG | 0.494530 | 5_2:-20162976 | None:intergenic |
| ATGTTTAATGGTAAAAGTCT+TGG | 0.495486 | 5_2:+20168350 | Msa0762250:CDS |
| GAAGTCTCTTGAAACTGGGT+TGG | 0.501534 | 5_2:+20166330 | Msa0762250:CDS |
| GAACTTCCCTAATTAGTGTC+AGG | 0.508441 | 5_2:-20165231 | None:intergenic |
| TGGGTGGTGAGGGTTTGGAA+GGG | 0.512771 | 5_2:-20163033 | None:intergenic |
| ATTGTACTTTATGGAGGCGT+TGG | 0.513388 | 5_2:-20163007 | None:intergenic |
| TTTAATGGTAAAAGTCTTGG+AGG | 0.517414 | 5_2:+20168353 | Msa0762250:CDS |
| GAGAACGTGGTCACTGAAGA+AGG | 0.533782 | 5_2:+20168386 | Msa0762250:CDS |
| ATTAACTAGTGAAGAAATGG+TGG | 0.533811 | 5_2:-20163098 | None:intergenic |
| CCTTATTTATAAAATCCACA+AGG | 0.544211 | 5_2:+20169544 | Msa0762250:intron |
| GCCATCAATTAAGGCAGATG+AGG | 0.554868 | 5_2:+20166260 | Msa0762250:CDS |
| CCATCAATTAAGGCAGATGA+GGG | 0.559358 | 5_2:+20166261 | Msa0762250:CDS |
| GATCAATGAGCTACAAACAA+AGG | 0.563866 | 5_2:+20166473 | Msa0762250:CDS |
| AAATTGTGTTGTGGGTGGTG+AGG | 0.566310 | 5_2:-20163044 | None:intergenic |
| AGACCTTGGTTTCAATTACA+CGG | 0.567331 | 5_2:-20166354 | None:intergenic |
| TTCTAGGTTCTGAAGTGATG+AGG | 0.573667 | 5_2:-20163123 | None:intergenic |
| AATTTCGTAGATGAATATTG+TGG | 0.575249 | 5_2:+20169581 | Msa0762250:three_prime_UTR |
| TGGAGAAGTCTCTTGAAACT+GGG | 0.575456 | 5_2:+20166326 | Msa0762250:CDS |
| GATGAGACAAAAGCACAAGA+AGG | 0.578611 | 5_2:-20163271 | None:intergenic |
| ACATATACACATTTACTACA+TGG | 0.579362 | 5_2:-20169617 | None:intergenic |
| CAACTCTACTAGTCCTCCAC+AGG | 0.580687 | 5_2:+20168439 | Msa0762250:CDS |
| CTTGCAGGGAAGGCAACTGA+TGG | 0.581631 | 5_2:+20168066 | Msa0762250:intron |
| TTAGACAATAAGAACCCTTG+TGG | 0.587915 | 5_2:-20169559 | None:intergenic |
| CTTATTTATAAAATCCACAA+GGG | 0.599395 | 5_2:+20169545 | Msa0762250:intron |
| ATTAAGGCAGATGAGGGGAG+AGG | 0.599804 | 5_2:+20166267 | Msa0762250:CDS |
| TTAATATAGAAATTGTGTTG+TGG | 0.601535 | 5_2:-20163053 | None:intergenic |
| GAGCTCTCATAGTCCTGTGG+AGG | 0.606403 | 5_2:-20168452 | None:intergenic |
| GCTGATAGTAGGTTTGTGCG+AGG | 0.610175 | 5_2:+20169516 | Msa0762250:exon |
| CTGATAGTAGGTTTGTGCGA+GGG | 0.611931 | 5_2:+20169517 | Msa0762250:exon |
| CAACTGTTCTAGACTGAGCA+AGG | 0.612785 | 5_2:+20166222 | Msa0762250:CDS |
| TCTGAGCTCTCATAGTCCTG+TGG | 0.617975 | 5_2:-20168455 | None:intergenic |
| GGGTGAATTGTACTTTATGG+AGG | 0.625699 | 5_2:-20163013 | None:intergenic |
| GGGCCGTGTAATTGAAACCA+AGG | 0.647098 | 5_2:+20166351 | Msa0762250:CDS |
| CAGACACCTCACTCAAATTG+GGG | 0.648977 | 5_2:+20168474 | Msa0762250:CDS |
| CCAACCTGCAACTCTAGCGA+CGG | 0.655662 | 5_2:-20165367 | None:intergenic |
| AGATTGAAAACGCAACGGCG+AGG | 0.667280 | 5_2:+20163478 | Msa0762250:five_prime_UTR |
| AACTAACCCCAATTTGAGTG+AGG | 0.674292 | 5_2:-20168480 | None:intergenic |
| AAAGAAGATTGAAAACGCAA+CGG | 0.680027 | 5_2:+20163473 | Msa0762250:five_prime_UTR |
| ATGAGGGGAGAGGATCTCCA+AGG | 0.680871 | 5_2:+20166277 | Msa0762250:CDS |
| TATAGAAATTGTGTTGTGGG+TGG | 0.680894 | 5_2:-20163049 | None:intergenic |
| CATCAATTAAGGCAGATGAG+GGG | 0.712596 | 5_2:+20166262 | Msa0762250:CDS |
| AGGAGTTGAATATGAGAACG+TGG | 0.723449 | 5_2:+20168373 | Msa0762250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAATATAA+AGG | + | chr5_2:20164278-20164297 | Msa0762250:intron | 0.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr5_2:20163777-20163796 | Msa0762250:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr5_2:20163778-20163797 | Msa0762250:intron | 10.0% |
| !! | ATTAATAAATAGTTATTGTT+GGG | + | chr5_2:20164716-20164735 | Msa0762250:intron | 10.0% |
| !! | GAAAACAATAAAATAATTTA+AGG | + | chr5_2:20164992-20165011 | Msa0762250:intron | 10.0% |
| !! | TTAAATAATTACAAAATCTT+TGG | + | chr5_2:20166077-20166096 | Msa0762250:intron | 10.0% |
| !! | AAAAAGAATAGAAATTTAAT+AGG | - | chr5_2:20166928-20166947 | None:intergenic | 10.0% |
| !! | TACTTTATATATACTTAATT+TGG | - | chr5_2:20166957-20166976 | None:intergenic | 10.0% |
| !!! | AAATTATCTTCTTTTATTTT+TGG | - | chr5_2:20168765-20168784 | None:intergenic | 10.0% |
| !! | GATAATTTATTATTATAATG+TGG | + | chr5_2:20168777-20168796 | Msa0762250:intron | 10.0% |
| !! | CATAAAAAAAGAAAAAAAAA+TGG | - | chr5_2:20168854-20168873 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCTTTTTTTATGA+CGG | + | chr5_2:20168855-20168874 | Msa0762250:intron | 10.0% |
| !!! | TTTTATAAAGTAATGATTTA+GGG | - | chr5_2:20169393-20169412 | None:intergenic | 10.0% |
| !!! | TTTTTATAAAGTAATGATTT+AGG | - | chr5_2:20169394-20169413 | None:intergenic | 10.0% |
| !! | ATATATGTAGCAAAAAATAA+AGG | + | chr5_2:20163363-20163382 | Msa0762250:intron | 15.0% |
| !! | TTAGTGAAAATAATAGTAAT+GGG | - | chr5_2:20163676-20163695 | None:intergenic | 15.0% |
| !! | TTTAGTGAAAATAATAGTAA+TGG | - | chr5_2:20163677-20163696 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr5_2:20163779-20163798 | Msa0762250:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr5_2:20163842-20163861 | Msa0762250:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr5_2:20163843-20163862 | Msa0762250:intron | 15.0% |
| !! | CATTAATAAATAGTTATTGT+TGG | + | chr5_2:20164715-20164734 | Msa0762250:intron | 15.0% |
| !!! | TTTTAATAATAGTACCTAAT+AGG | - | chr5_2:20164790-20164809 | None:intergenic | 15.0% |
| !! | ATTATTTAAACAACTAATGT+CGG | - | chr5_2:20166066-20166085 | None:intergenic | 15.0% |
| !!! | TGTGTACAATAATTTTTATA+TGG | + | chr5_2:20166118-20166137 | Msa0762250:intron | 15.0% |
| !!! | ATTTTTCTATGTCTAAATAA+CGG | - | chr5_2:20166613-20166632 | None:intergenic | 15.0% |
| !! | ACACAATATTTATGTTTATA+AGG | + | chr5_2:20167006-20167025 | Msa0762250:intron | 15.0% |
| !!! | ACTAATATTTTTTTTTTTGG+TGG | + | chr5_2:20167169-20167188 | Msa0762250:intron | 15.0% |
| !!! | TATTTTTATTTTTGCACATA+TGG | + | chr5_2:20167365-20167384 | Msa0762250:intron | 15.0% |
| !! | TTATCTTAGATTAAATAAGA+TGG | - | chr5_2:20168175-20168194 | None:intergenic | 15.0% |
| !!! | AAATTTTCCTAATAATGATA+TGG | + | chr5_2:20168193-20168212 | Msa0762250:intron | 15.0% |
| !!! | AATTTTCCTAATAATGATAT+GGG | + | chr5_2:20168194-20168213 | Msa0762250:intron | 15.0% |
| !! | TTCACTATTAATTAAAGTAT+TGG | - | chr5_2:20168721-20168740 | None:intergenic | 15.0% |
| !! | TATGTAAAAATGTAAAATTG+AGG | + | chr5_2:20168804-20168823 | Msa0762250:intron | 15.0% |
| !!! | TTTTTTTCTTTTTTTATGAC+GGG | + | chr5_2:20168856-20168875 | Msa0762250:intron | 15.0% |
| !! | TGAAAAAACAAAAATTAGTT+AGG | + | chr5_2:20168965-20168984 | Msa0762250:intron | 15.0% |
| !! | GAAAAAACAAAAATTAGTTA+GGG | + | chr5_2:20168966-20168985 | Msa0762250:intron | 15.0% |
| !!! | TACTTTTTTTGAAACAATTT+CGG | - | chr5_2:20169683-20169702 | None:intergenic | 15.0% |
| !! | TAAATGAATTAAACACAAAT+TGG | - | chr5_2:20169710-20169729 | None:intergenic | 15.0% |
| !! | TAATATAGAAATTGTGTTGT+GGG | - | chr5_2:20163055-20163074 | None:intergenic | 20.0% |
| !! | TTAATATAGAAATTGTGTTG+TGG | - | chr5_2:20163056-20163075 | None:intergenic | 20.0% |
| !!! | ATGGTGGATTTATTTATTTT+TGG | - | chr5_2:20163085-20163104 | None:intergenic | 20.0% |
| !!! | AGCTAATTTTAGTTTTGTTT+AGG | - | chr5_2:20163152-20163171 | None:intergenic | 20.0% |
| !!! | ATTATTGTTTTATCCAAAAG+AGG | + | chr5_2:20163405-20163424 | Msa0762250:intron | 20.0% |
| !! | AATTAAGGTAAAGAAAGATA+TGG | + | chr5_2:20163431-20163450 | Msa0762250:five_prime_UTR | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr5_2:20163802-20163821 | Msa0762250:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | chr5_2:20163912-20163931 | Msa0762250:intron | 20.0% |
| !! | CTTGATGTAAAATAGATAAT+GGG | - | chr5_2:20164066-20164085 | None:intergenic | 20.0% |
| !! | TCTTGATGTAAAATAGATAA+TGG | - | chr5_2:20164067-20164086 | None:intergenic | 20.0% |
| !! | TTTACATCAAGAGATATAAA+TGG | + | chr5_2:20164075-20164094 | Msa0762250:intron | 20.0% |
| !! | ATAAAATATTGAATGAGTGA+AGG | + | chr5_2:20164160-20164179 | Msa0762250:intron | 20.0% |
| !! | TATAATAGTCTATTATCTCA+CGG | + | chr5_2:20164202-20164221 | Msa0762250:intron | 20.0% |
| !!! | ATTTTATTGAAAAGTAGTGT+GGG | - | chr5_2:20164664-20164683 | None:intergenic | 20.0% |
| !!! | TATTTTATTGAAAAGTAGTG+TGG | - | chr5_2:20164665-20164684 | None:intergenic | 20.0% |
| !! | ATCTATCAAAAAGTCTAAAT+GGG | - | chr5_2:20164743-20164762 | None:intergenic | 20.0% |
| !! | AAAGAAAATCTTGAATAGAT+TGG | + | chr5_2:20165505-20165524 | Msa0762250:intron | 20.0% |
| !! | ACTAAACTATTATTTGATAG+AGG | - | chr5_2:20165742-20165761 | None:intergenic | 20.0% |
| !! | GAAAGATTCCATATTATATA+TGG | + | chr5_2:20165811-20165830 | Msa0762250:intron | 20.0% |
| !!! | AAATAATAAGACCTTTTCAT+AGG | + | chr5_2:20165866-20165885 | Msa0762250:intron | 20.0% |
| !!! | AATAATAAGACCTTTTCATA+GGG | + | chr5_2:20165867-20165886 | Msa0762250:intron | 20.0% |
| !!! | TCTGTTAGTATTTTTACTAA+AGG | - | chr5_2:20165971-20165990 | None:intergenic | 20.0% |
| !!! | TCTGTTAGTATTTTTACTAA+AGG | - | chr5_2:20165971-20165990 | None:intergenic | 20.0% |
| !! | TAATTACAAAATCTTTGGAT+AGG | + | chr5_2:20166082-20166101 | Msa0762250:intron | 20.0% |
| !! | TTAAATTTAAGCATCAAACA+TGG | - | chr5_2:20166181-20166200 | None:intergenic | 20.0% |
| !! | AGACATAGAAAAATGTTATT+TGG | + | chr5_2:20166619-20166638 | Msa0762250:intron | 20.0% |
| !! | TGTGATTGAAACTATATATA+AGG | + | chr5_2:20166807-20166826 | Msa0762250:intron | 20.0% |
| !! | TGAAACTATATATAAGGAAA+AGG | + | chr5_2:20166813-20166832 | Msa0762250:intron | 20.0% |
| !!! | CATAAATATTGTGTGTTTTT+CGG | - | chr5_2:20167000-20167019 | None:intergenic | 20.0% |
| !!! | AATATTTTTTTTTTTGGTGG+TGG | + | chr5_2:20167172-20167191 | Msa0762250:intron | 20.0% |
| !! | AAAATTGTGTTAAATATGCA+AGG | - | chr5_2:20167248-20167267 | None:intergenic | 20.0% |
| !!! | ATTTTCACAGCTTTTAAAAT+AGG | + | chr5_2:20167467-20167486 | Msa0762250:intron | 20.0% |
| !!! | ATGTGATGTTATATATGTTT+TGG | - | chr5_2:20167826-20167845 | None:intergenic | 20.0% |
| !! | AAATGTCACATTATATGTTT+GGG | - | chr5_2:20168671-20168690 | None:intergenic | 20.0% |
| !! | ATTAATAGTGAAAAGAAGAA+AGG | + | chr5_2:20168729-20168748 | Msa0762250:intron | 20.0% |
| !! | TGCACATACTAAAATTAAAT+GGG | - | chr5_2:20168885-20168904 | None:intergenic | 20.0% |
| !! | TTGCACATACTAAAATTAAA+TGG | - | chr5_2:20168886-20168905 | None:intergenic | 20.0% |
| !!! | ATTAGGAAGTTTTTTTTTTG+AGG | - | chr5_2:20169239-20169258 | None:intergenic | 20.0% |
| !!! | ATGTTTAGTCATATTTTAGT+GGG | - | chr5_2:20169267-20169286 | None:intergenic | 20.0% |
| !! | CTTATTTATAAAATCCACAA+GGG | + | chr5_2:20169545-20169564 | Msa0762250:intron | 20.0% |
| !!! | TCTTTTTTCTCTCTTTTCAT+TGG | + | chr5_2:20162899-20162918 | Msa0762250:five_prime_UTR | 25.0% |
| ! | ATGATAAAGAGAAGAAACTT+AGG | - | chr5_2:20162979-20162998 | None:intergenic | 25.0% |
| ! | GAAATTAACTAGTGAAGAAA+TGG | - | chr5_2:20163104-20163123 | None:intergenic | 25.0% |
| !!! | AGTTTTGTTTAGGAATTTCT+AGG | - | chr5_2:20163142-20163161 | None:intergenic | 25.0% |
| !! | ATGTGTAAGTTGACTATTTA+TGG | - | chr5_2:20163242-20163261 | None:intergenic | 25.0% |
| !! | CTTTTGTCTCATCTTTTTTT+AGG | + | chr5_2:20163281-20163300 | Msa0762250:five_prime_UTR | 25.0% |
| ! | ATCCAAAAGAGGATAAATTA+AGG | + | chr5_2:20163416-20163435 | Msa0762250:intron | 25.0% |
| !! | TACCTTAATTTATCCTCTTT+TGG | - | chr5_2:20163421-20163440 | None:intergenic | 25.0% |
| ! | AAGAAGAGGATTAATCAAAA+AGG | + | chr5_2:20163521-20163540 | Msa0762250:five_prime_UTR | 25.0% |
| ! | TAATACTAATCAACACAGTT+TGG | - | chr5_2:20163709-20163728 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr5_2:20163801-20163820 | Msa0762250:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr5_2:20163889-20163908 | Msa0762250:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr5_2:20163890-20163909 | Msa0762250:intron | 25.0% |
| ! | AAGAAAAAAAAATGATGCGA+TGG | + | chr5_2:20164116-20164135 | Msa0762250:intron | 25.0% |
| ! | AATGAGTGAAGGAAAATTAA+AGG | + | chr5_2:20164171-20164190 | Msa0762250:intron | 25.0% |
| ! | TGAAAATATGTGTAAGTTGT+AGG | - | chr5_2:20164388-20164407 | None:intergenic | 25.0% |
| !!! | AATTTTTTTTTCCACATTGG+AGG | - | chr5_2:20164588-20164607 | None:intergenic | 25.0% |
| ! | TCCAATGTGGAAAAAAAAAT+TGG | + | chr5_2:20164587-20164606 | Msa0762250:intron | 25.0% |
| ! | CCAATGTGGAAAAAAAAATT+GGG | + | chr5_2:20164588-20164607 | Msa0762250:intron | 25.0% |
| ! | CAATGTGGAAAAAAAAATTG+GGG | + | chr5_2:20164589-20164608 | Msa0762250:intron | 25.0% |
| ! | AATGTGGAAAAAAAAATTGG+GGG | + | chr5_2:20164590-20164609 | Msa0762250:intron | 25.0% |
| !! | TTTTATTGAAAAGTAGTGTG+GGG | - | chr5_2:20164663-20164682 | None:intergenic | 25.0% |
| ! | CATCTATCAAAAAGTCTAAA+TGG | - | chr5_2:20164744-20164763 | None:intergenic | 25.0% |
| !! | TTACATTTGAGTTCTTAAAC+GGG | - | chr5_2:20164844-20164863 | None:intergenic | 25.0% |
| !! | CTTACATTTGAGTTCTTAAA+CGG | - | chr5_2:20164845-20164864 | None:intergenic | 25.0% |
| ! | GTTTAAGAACTCAAATGTAA+GGG | + | chr5_2:20164844-20164863 | Msa0762250:intron | 25.0% |
| ! | TCATTTCTGTTTCCTTTATT+AGG | + | chr5_2:20165116-20165135 | Msa0762250:intron | 25.0% |
| !!! | AACATATGATTTGTGGTTTT+AGG | - | chr5_2:20165654-20165673 | None:intergenic | 25.0% |
| ! | ATACTTCATGAGAAAATGTT+GGG | + | chr5_2:20165787-20165806 | Msa0762250:intron | 25.0% |
| ! | CAAGCAAACCATATATAATA+TGG | - | chr5_2:20165822-20165841 | None:intergenic | 25.0% |
| !! | ATAATAAGACCTTTTCATAG+GGG | + | chr5_2:20165868-20165887 | Msa0762250:intron | 25.0% |
| ! | TGAAACATTTCTCATAGTTT+CGG | + | chr5_2:20166141-20166160 | Msa0762250:intron | 25.0% |
| ! | CCAAGTATATAGTAGATATA+TGG | - | chr5_2:20166651-20166670 | None:intergenic | 25.0% |
| ! | CCATATATCTACTATATACT+TGG | + | chr5_2:20166648-20166667 | Msa0762250:intron | 25.0% |
| ! | GCGACAAATTAAATTTCATA+GGG | + | chr5_2:20167141-20167160 | Msa0762250:intron | 25.0% |
| !! | TTTGTTAATGGAGAAGATTT+TGG | + | chr5_2:20167333-20167352 | Msa0762250:intron | 25.0% |
| ! | TATAAAGTCTGGATATAGAA+AGG | - | chr5_2:20167409-20167428 | None:intergenic | 25.0% |
| !! | TGTCCTTTGTTATGTTATTT+CGG | - | chr5_2:20167573-20167592 | None:intergenic | 25.0% |
| ! | TAACAAAGGACATTGTATAT+AGG | + | chr5_2:20167581-20167600 | Msa0762250:intron | 25.0% |
| !!! | ATATGTTTTGGTTAGTATGA+TGG | - | chr5_2:20167814-20167833 | None:intergenic | 25.0% |
| ! | AACTAAATACAATTAGTGGT+GGG | - | chr5_2:20167918-20167937 | None:intergenic | 25.0% |
| ! | ACACAACTAAATACAATTAG+TGG | - | chr5_2:20167922-20167941 | None:intergenic | 25.0% |
| ! | CTAATTGTATTTAGTTGTGT+TGG | + | chr5_2:20167922-20167941 | Msa0762250:intron | 25.0% |
| !! | TTTTGTCCCATATCATTATT+AGG | - | chr5_2:20168203-20168222 | None:intergenic | 25.0% |
| ! | TAAAATCACTTGTATGTGTT+AGG | + | chr5_2:20168319-20168338 | Msa0762250:intron | 25.0% |
| ! | ATGTTTAATGGTAAAAGTCT+TGG | + | chr5_2:20168350-20168369 | Msa0762250:CDS | 25.0% |
| !!! | TTTTTAGTCATATAGCTTAG+TGG | + | chr5_2:20168566-20168585 | Msa0762250:intron | 25.0% |
| ! | AATGTCACATTATATGTTTG+GGG | - | chr5_2:20168670-20168689 | None:intergenic | 25.0% |
| ! | CAAATGTCACATTATATGTT+TGG | - | chr5_2:20168672-20168691 | None:intergenic | 25.0% |
| ! | CAAACATATAATGTGACATT+TGG | + | chr5_2:20168670-20168689 | Msa0762250:intron | 25.0% |
| ! | TTGATCGTAAAATTTAGTGA+CGG | - | chr5_2:20169030-20169049 | None:intergenic | 25.0% |
| ! | TACTAGGAAAAGCAAAATTA+AGG | - | chr5_2:20169096-20169115 | None:intergenic | 25.0% |
| ! | TTTGTTAAATAGACACTACT+AGG | - | chr5_2:20169112-20169131 | None:intergenic | 25.0% |
| !!! | TATTTTAGTGGGTGAAAATT+AGG | - | chr5_2:20169256-20169275 | None:intergenic | 25.0% |
| !!! | CATGTTTAGTCATATTTTAG+TGG | - | chr5_2:20169268-20169287 | None:intergenic | 25.0% |
| !! | CCTTGTGGATTTTATAAATA+AGG | - | chr5_2:20169547-20169566 | None:intergenic | 25.0% |
| !! | CCTTATTTATAAAATCCACA+AGG | + | chr5_2:20169544-20169563 | Msa0762250:intron | 25.0% |
| ! | AATTTCGTAGATGAATATTG+TGG | + | chr5_2:20169581-20169600 | Msa0762250:three_prime_UTR | 25.0% |
| ! | ACATATACACATTTACTACA+TGG | - | chr5_2:20169620-20169639 | None:intergenic | 25.0% |
| ! | TATGTATTTGTAATGACTTC+AGG | + | chr5_2:20169639-20169658 | Msa0762250:three_prime_UTR | 25.0% |
| !! | AACAGTTAATGGTTTTTGTT+TGG | + | chr5_2:20169740-20169759 | Msa0762250:three_prime_UTR | 25.0% |
| ! | TTTTTCTCTCTTTTCATTGG+TGG | + | chr5_2:20162902-20162921 | Msa0762250:five_prime_UTR | 30.0% |
| !!! | TTTGGAGCTTTTGTTTTGTT+TGG | - | chr5_2:20162955-20162974 | None:intergenic | 30.0% |
| ! | AAGAGAAGAAACTTAGGTTT+TGG | - | chr5_2:20162973-20162992 | None:intergenic | 30.0% |
| ATTAACTAGTGAAGAAATGG+TGG | - | chr5_2:20163101-20163120 | None:intergenic | 30.0% | |
| TCTTTCTTATAATTGTACGC+TGG | + | chr5_2:20163311-20163330 | Msa0762250:intron | 30.0% | |
| AAAGAAGATTGAAAACGCAA+CGG | + | chr5_2:20163473-20163492 | Msa0762250:five_prime_UTR | 30.0% | |
| !!! | ACTTTTTCAAAGAGAAGAAG+AGG | + | chr5_2:20163507-20163526 | Msa0762250:five_prime_UTR | 30.0% |
| ! | CTCATTATTTTCTCTTCTAC+TGG | + | chr5_2:20163582-20163601 | Msa0762250:five_prime_UTR | 30.0% |
| TCTTTGAATACTCCAACTTA+AGG | + | chr5_2:20163610-20163629 | Msa0762250:five_prime_UTR | 30.0% | |
| TATGTGTGAAAAACCAAAGT+AGG | - | chr5_2:20163756-20163775 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr5_2:20163786-20163805 | Msa0762250:intron | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | + | chr5_2:20163925-20163944 | Msa0762250:intron | 30.0% | |
| CATTTCCTAGATACATTGAA+GGG | - | chr5_2:20164032-20164051 | None:intergenic | 30.0% | |
| TCATTTCCTAGATACATTGA+AGG | - | chr5_2:20164033-20164052 | None:intergenic | 30.0% | |
| GGTCTTTACCATATAAGATT+CGG | + | chr5_2:20164549-20164568 | Msa0762250:intron | 30.0% | |
| !! | ATTAGGTACCGAATCTTATA+TGG | - | chr5_2:20164560-20164579 | None:intergenic | 30.0% |
| ! | TATAAGATTCGGTACCTAAT+AGG | + | chr5_2:20164560-20164579 | Msa0762250:intron | 30.0% |
| !!! | CCCAATTTTTTTTTCCACAT+TGG | - | chr5_2:20164591-20164610 | None:intergenic | 30.0% |
| CGTTTAAGAACTCAAATGTA+AGG | + | chr5_2:20164843-20164862 | Msa0762250:intron | 30.0% | |
| CTTAAGTCTGTTCTGATTAA+GGG | + | chr5_2:20164909-20164928 | Msa0762250:intron | 30.0% | |
| ATCACTGTAAAGCCTAATAA+AGG | - | chr5_2:20165131-20165150 | None:intergenic | 30.0% | |
| !! | TATTTTTGCAATGAAGCATG+AGG | + | chr5_2:20165290-20165309 | Msa0762250:exon | 30.0% |
| ! | ATTTTTGCAATGAAGCATGA+GGG | + | chr5_2:20165291-20165310 | Msa0762250:exon | 30.0% |
| ! | TGAGTCAAGTTATCTTTTGT+AGG | - | chr5_2:20165579-20165598 | None:intergenic | 30.0% |
| AAGCTAACTGAGTTTCTATT+CGG | - | chr5_2:20165602-20165621 | None:intergenic | 30.0% | |
| CTCGAAAAACATATGATTTG+TGG | - | chr5_2:20165661-20165680 | None:intergenic | 30.0% | |
| !!! | TTTTTCGAGTATCCTATGTA+TGG | + | chr5_2:20165672-20165691 | Msa0762250:intron | 30.0% |
| GATACTTCATGAGAAAATGT+TGG | + | chr5_2:20165786-20165805 | Msa0762250:intron | 30.0% | |
| ATCTTATATCCCCTATGAAA+AGG | - | chr5_2:20165880-20165899 | None:intergenic | 30.0% | |
| CTAAAGGTGATAATTGAACT+CGG | - | chr5_2:20165955-20165974 | None:intergenic | 30.0% | |
| TTACAAAATCTTTGGATAGG+AGG | + | chr5_2:20166085-20166104 | Msa0762250:intron | 30.0% | |
| TCTGGAAGAATTACAACAAT+TGG | + | chr5_2:20166306-20166325 | Msa0762250:CDS | 30.0% | |
| !!! | AAAACATCTTTCGAGTTTTC+AGG | + | chr5_2:20166431-20166450 | Msa0762250:intron | 30.0% |
| !!! | AAACATCTTTCGAGTTTTCA+GGG | + | chr5_2:20166432-20166451 | Msa0762250:intron | 30.0% |
| TTTCTATGTCTAAATAACGG+TGG | - | chr5_2:20166610-20166629 | None:intergenic | 30.0% | |
| TAATGATGTGATGAAAAGTG+AGG | + | chr5_2:20166705-20166724 | Msa0762250:intron | 30.0% | |
| GGGAATCACATAAAGTATAA+AGG | - | chr5_2:20167098-20167117 | None:intergenic | 30.0% | |
| AATTACCACACAAAACTCTT+GGG | - | chr5_2:20167118-20167137 | None:intergenic | 30.0% | |
| AAATTACCACACAAAACTCT+TGG | - | chr5_2:20167119-20167138 | None:intergenic | 30.0% | |
| !! | AAGAGTTTTGTGTGGTAATT+TGG | + | chr5_2:20167118-20167137 | Msa0762250:intron | 30.0% |
| !! | AGAGTTTTGTGTGGTAATTT+GGG | + | chr5_2:20167119-20167138 | Msa0762250:intron | 30.0% |
| GGCGACAAATTAAATTTCAT+AGG | + | chr5_2:20167140-20167159 | Msa0762250:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr5_2:20167217-20167236 | None:intergenic | 30.0% | |
| !! | TTAAATATGCAAGGTTGGTA+AGG | - | chr5_2:20167239-20167258 | None:intergenic | 30.0% |
| TTGTGTTAAATATGCAAGGT+TGG | - | chr5_2:20167244-20167263 | None:intergenic | 30.0% | |
| !! | TGTTGCAACGAATTTGTTAA+TGG | + | chr5_2:20167321-20167340 | Msa0762250:intron | 30.0% |
| TCTATATCCAGACTTTATAG+AGG | + | chr5_2:20167410-20167429 | Msa0762250:intron | 30.0% | |
| AGACCGAAATAACATAACAA+AGG | + | chr5_2:20167567-20167586 | Msa0762250:intron | 30.0% | |
| !! | ATTGATGTTTTTGATGTACG+AGG | - | chr5_2:20167633-20167652 | None:intergenic | 30.0% |
| !! | TGGAGATTTGGATTTGTTTT+CGG | - | chr5_2:20167678-20167697 | None:intergenic | 30.0% |
| !! | TCATTCAAGTTTGAGGTTTT+TGG | - | chr5_2:20167726-20167745 | None:intergenic | 30.0% |
| !!! | ATGTTTGGAAGTTGTTTTTG+AGG | - | chr5_2:20167749-20167768 | None:intergenic | 30.0% |
| TGTTTATTTCGATTCAGTTG+TGG | - | chr5_2:20167861-20167880 | None:intergenic | 30.0% | |
| ! | GTGTTGGAATATGTGTTATT+CGG | - | chr5_2:20167885-20167904 | None:intergenic | 30.0% |
| CAACTAAATACAATTAGTGG+TGG | - | chr5_2:20167919-20167938 | None:intergenic | 30.0% | |
| !!! | ATCATACATGTCGTTTTAGT+CGG | - | chr5_2:20168102-20168121 | None:intergenic | 30.0% |
| GAAAAAAAAAAGTCTGCATG+AGG | - | chr5_2:20168153-20168172 | None:intergenic | 30.0% | |
| TTTAATGGTAAAAGTCTTGG+AGG | + | chr5_2:20168353-20168372 | Msa0762250:CDS | 30.0% | |
| CAATGACACATTGAATGAAA+TGG | - | chr5_2:20168530-20168549 | None:intergenic | 30.0% | |
| CACTACTAATTCATCTCAAA+GGG | - | chr5_2:20168603-20168622 | None:intergenic | 30.0% | |
| TCACTACTAATTCATCTCAA+AGG | - | chr5_2:20168604-20168623 | None:intergenic | 30.0% | |
| TTAGTTAGGGAAATTTAGAG+AGG | + | chr5_2:20168979-20168998 | Msa0762250:intron | 30.0% | |
| TAGTTAGGGAAATTTAGAGA+GGG | + | chr5_2:20168980-20168999 | Msa0762250:intron | 30.0% | |
| ! | TTTAGTGACGGAATTATAGA+GGG | - | chr5_2:20169018-20169037 | None:intergenic | 30.0% |
| ! | ATTTAGTGACGGAATTATAG+AGG | - | chr5_2:20169019-20169038 | None:intergenic | 30.0% |
| ! | GTCACTAAATTTTACGATCA+AGG | + | chr5_2:20169029-20169048 | Msa0762250:intron | 30.0% |
| AGGAAAAGCAAAATTAAGGA+GGG | - | chr5_2:20169092-20169111 | None:intergenic | 30.0% | |
| TAGGAAAAGCAAAATTAAGG+AGG | - | chr5_2:20169093-20169112 | None:intergenic | 30.0% | |
| AGAGGTGGAAAGAATAAAAT+TGG | - | chr5_2:20169361-20169380 | None:intergenic | 30.0% | |
| ! | GATTTAGGGTAAGAAATAAG+AGG | - | chr5_2:20169379-20169398 | None:intergenic | 30.0% |
| AGTTTAACCAGAACAGTTAA+TGG | + | chr5_2:20169729-20169748 | Msa0762250:three_prime_UTR | 30.0% | |
| ACAAAAACCATTAACTGTTC+TGG | - | chr5_2:20169739-20169758 | None:intergenic | 30.0% | |
| GAAGGGTGAATTGTACTTTA+TGG | - | chr5_2:20163019-20163038 | None:intergenic | 35.0% | |
| TATAGAAATTGTGTTGTGGG+TGG | - | chr5_2:20163052-20163071 | None:intergenic | 35.0% | |
| GAGAAAGAAAGACCTTAAGT+TGG | - | chr5_2:20163625-20163644 | None:intergenic | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | - | chr5_2:20163742-20163761 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | - | chr5_2:20163743-20163762 | None:intergenic | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | + | chr5_2:20163926-20163945 | Msa0762250:intron | 35.0% | |
| ATACTCCCTTCAATGTATCT+AGG | + | chr5_2:20164024-20164043 | Msa0762250:intron | 35.0% | |
| TCTTTCCCCTAAGAATATGA+GGG | + | chr5_2:20164248-20164267 | Msa0762250:intron | 35.0% | |
| GTTAACCCTCATATTCTTAG+GGG | - | chr5_2:20164256-20164275 | None:intergenic | 35.0% | |
| CGTTAACCCTCATATTCTTA+GGG | - | chr5_2:20164257-20164276 | None:intergenic | 35.0% | |
| !! | AGTTATAAGAGCATCCACAT+TGG | + | chr5_2:20164523-20164542 | Msa0762250:intron | 35.0% |
| ATAGATGATCTCCATTGAAG+TGG | + | chr5_2:20164757-20164776 | Msa0762250:intron | 35.0% | |
| TAGGTACTAAACCACTTCAA+TGG | - | chr5_2:20164771-20164790 | None:intergenic | 35.0% | |
| GAAGTGGTTTAGTACCTATT+AGG | + | chr5_2:20164773-20164792 | Msa0762250:intron | 35.0% | |
| AAAAAAGTGATGTGTCCATG+TGG | + | chr5_2:20164816-20164835 | Msa0762250:intron | 35.0% | |
| AAAAAGTGATGTGTCCATGT+GGG | + | chr5_2:20164817-20164836 | Msa0762250:intron | 35.0% | |
| GCTTAAGTCTGTTCTGATTA+AGG | + | chr5_2:20164908-20164927 | Msa0762250:intron | 35.0% | |
| AAGTGTGTTAATGTGTGTCA+GGG | - | chr5_2:20165043-20165062 | None:intergenic | 35.0% | |
| AAAGTGTGTTAATGTGTGTC+AGG | - | chr5_2:20165044-20165063 | None:intergenic | 35.0% | |
| !!! | GCATTGTTCAGACCATTTTT+TGG | + | chr5_2:20165207-20165226 | Msa0762250:intron | 35.0% |
| TTAGTGTCAGGTCCAAAAAA+TGG | - | chr5_2:20165222-20165241 | None:intergenic | 35.0% | |
| ! | TTTTGGACCTGACACTAATT+AGG | + | chr5_2:20165224-20165243 | Msa0762250:five_prime_UTR | 35.0% |
| TTTGGACCTGACACTAATTA+GGG | + | chr5_2:20165225-20165244 | Msa0762250:five_prime_UTR | 35.0% | |
| TTGAATCACTTATGTGCTTG+TGG | + | chr5_2:20165413-20165432 | Msa0762250:intron | 35.0% | |
| ACTAACAGTTGTCCATACAT+AGG | - | chr5_2:20165687-20165706 | None:intergenic | 35.0% | |
| TATGTATGGACAACTGTTAG+TGG | + | chr5_2:20165686-20165705 | Msa0762250:intron | 35.0% | |
| ATGTATGGACAACTGTTAGT+GGG | + | chr5_2:20165687-20165706 | Msa0762250:intron | 35.0% | |
| !! | TATATGGTTTGCTTGCGTTA+AGG | + | chr5_2:20165827-20165846 | Msa0762250:intron | 35.0% |
| TAGGGGATATAAGATTGACT+TGG | + | chr5_2:20165885-20165904 | Msa0762250:intron | 35.0% | |
| !! | TATAAGATTGACTTGGTGGT+TGG | + | chr5_2:20165892-20165911 | Msa0762250:intron | 35.0% |
| !! | ATAAGATTGACTTGGTGGTT+GGG | + | chr5_2:20165893-20165912 | Msa0762250:intron | 35.0% |
| AACAAGTGGAGTGATAAAGT+TGG | + | chr5_2:20165927-20165946 | Msa0762250:intron | 35.0% | |
| CTCAGAAAAGCCATCAATTA+AGG | + | chr5_2:20166251-20166270 | Msa0762250:CDS | 35.0% | |
| AGACCTTGGTTTCAATTACA+CGG | - | chr5_2:20166357-20166376 | None:intergenic | 35.0% | |
| GTAGATAGAATTGAAGACCT+TGG | - | chr5_2:20166371-20166390 | None:intergenic | 35.0% | |
| GATCAATGAGCTACAAACAA+AGG | + | chr5_2:20166473-20166492 | Msa0762250:CDS | 35.0% | |
| TGCATACACATACACAATCT+TGG | + | chr5_2:20166868-20166887 | Msa0762250:intron | 35.0% | |
| !! | AGTATCCGAGTCTTATTTGA+AGG | + | chr5_2:20166973-20166992 | Msa0762250:intron | 35.0% |
| GCATAATATATGCAAGGTTC+AGG | - | chr5_2:20167211-20167230 | None:intergenic | 35.0% | |
| CAAATTCGTTGCAACAATCT+AGG | - | chr5_2:20167317-20167336 | None:intergenic | 35.0% | |
| !! | TTTGGATTTGTTTTCGGAGT+TGG | - | chr5_2:20167672-20167691 | None:intergenic | 35.0% |
| ! | TTTGAGGTCATTCAAGTTTG+AGG | - | chr5_2:20167733-20167752 | None:intergenic | 35.0% |
| TAGTATGATGGTCATTTGGA+GGG | - | chr5_2:20167802-20167821 | None:intergenic | 35.0% | |
| TTAGTATGATGGTCATTTGG+AGG | - | chr5_2:20167803-20167822 | None:intergenic | 35.0% | |
| TGGTTAGTATGATGGTCATT+TGG | - | chr5_2:20167806-20167825 | None:intergenic | 35.0% | |
| GATTCAGTTGTGGAAATTCA+AGG | - | chr5_2:20167851-20167870 | None:intergenic | 35.0% | |
| CACATATTCCAACACTCATT+TGG | + | chr5_2:20167890-20167909 | Msa0762250:intron | 35.0% | |
| ! | ACAACTTTTACTGAACTTGC+AGG | + | chr5_2:20168051-20168070 | Msa0762250:intron | 35.0% |
| ! | CAACTTTTACTGAACTTGCA+GGG | + | chr5_2:20168052-20168071 | Msa0762250:intron | 35.0% |
| TGAACTCTAGACTTTGCATA+TGG | + | chr5_2:20168634-20168653 | Msa0762250:intron | 35.0% | |
| TACGATCAAGGAATTTGTGA+AGG | + | chr5_2:20169041-20169060 | Msa0762250:intron | 35.0% | |
| ! | ATATTTGCTAACTTGTACCC+AGG | + | chr5_2:20169197-20169216 | Msa0762250:intron | 35.0% |
| GAAAAATACAGATGCAACCT+GGG | - | chr5_2:20169217-20169236 | None:intergenic | 35.0% | |
| TTAGGGTAAGAAATAAGAGG+TGG | - | chr5_2:20169376-20169395 | None:intergenic | 35.0% | |
| TTAGACAATAAGAACCCTTG+TGG | - | chr5_2:20169562-20169581 | None:intergenic | 35.0% | |
| !!! | TTTGTTTTGTTTGGCTCGTG+AGG | - | chr5_2:20162946-20162965 | None:intergenic | 40.0% |
| !! | TTTATGGAGGCGTTGGTATT+TGG | - | chr5_2:20163003-20163022 | None:intergenic | 40.0% |
| ! | ATTGTACTTTATGGAGGCGT+TGG | - | chr5_2:20163010-20163029 | None:intergenic | 40.0% |
| GGGTGAATTGTACTTTATGG+AGG | - | chr5_2:20163016-20163035 | None:intergenic | 40.0% | |
| !! | TTCTAGGTTCTGAAGTGATG+AGG | - | chr5_2:20163126-20163145 | None:intergenic | 40.0% |
| ! | GATGAGACAAAAGCACAAGA+AGG | - | chr5_2:20163274-20163293 | None:intergenic | 40.0% |
| CCGGTTTAATTGACCTACTT+TGG | + | chr5_2:20163740-20163759 | Msa0762250:intron | 40.0% | |
| ! | GGAAAGAGACTTTGGTAATC+CGG | - | chr5_2:20164235-20164254 | None:intergenic | 40.0% |
| TTCTTAGGGGAAAGAGACTT+TGG | - | chr5_2:20164243-20164262 | None:intergenic | 40.0% | |
| CTCTTTCCCCTAAGAATATG+AGG | + | chr5_2:20164247-20164266 | Msa0762250:intron | 40.0% | |
| GCGTTAACCCTCATATTCTT+AGG | - | chr5_2:20164258-20164277 | None:intergenic | 40.0% | |
| !! | ATAAGAGCATCCACATTGGT+AGG | + | chr5_2:20164527-20164546 | Msa0762250:intron | 40.0% |
| !! | TAAGAGCATCCACATTGGTA+GGG | + | chr5_2:20164528-20164547 | Msa0762250:intron | 40.0% |
| TTAAGACCCTCAATCTTACG+TGG | + | chr5_2:20164636-20164655 | Msa0762250:intron | 40.0% | |
| AAATGTAAGGGTCTCCATTG+TGG | + | chr5_2:20164856-20164875 | Msa0762250:intron | 40.0% | |
| AGGCTGTGTAAGCAATTCAT+TGG | - | chr5_2:20164941-20164960 | None:intergenic | 40.0% | |
| ! | TAAGTCTAGGACACCAAACA+CGG | + | chr5_2:20164960-20164979 | Msa0762250:intron | 40.0% |
| GAACTTCCCTAATTAGTGTC+AGG | - | chr5_2:20165234-20165253 | None:intergenic | 40.0% | |
| GAATAGATTGGTACCACTGA+AGG | + | chr5_2:20165517-20165536 | Msa0762250:intron | 40.0% | |
| TTAGCTTCTCAAATGTGCGA+GGG | + | chr5_2:20165615-20165634 | Msa0762250:intron | 40.0% | |
| !! | GGGATATAAGATTGACTTGG+TGG | + | chr5_2:20165888-20165907 | Msa0762250:intron | 40.0% |
| !! | TAAGATTGACTTGGTGGTTG+GGG | + | chr5_2:20165894-20165913 | Msa0762250:intron | 40.0% |
| CCATCAATTAAGGCAGATGA+GGG | + | chr5_2:20166261-20166280 | Msa0762250:CDS | 40.0% | |
| CATCAATTAAGGCAGATGAG+GGG | + | chr5_2:20166262-20166281 | Msa0762250:CDS | 40.0% | |
| ATTCTTCCAGACTCAAACCT+TGG | - | chr5_2:20166297-20166316 | None:intergenic | 40.0% | |
| TTGGAGAAGTCTCTTGAAAC+TGG | + | chr5_2:20166325-20166344 | Msa0762250:CDS | 40.0% | |
| TGGAGAAGTCTCTTGAAACT+GGG | + | chr5_2:20166326-20166345 | Msa0762250:CDS | 40.0% | |
| AAGTCTCTTGAAACTGGGTT+GGG | + | chr5_2:20166331-20166350 | Msa0762250:CDS | 40.0% | |
| TCAGGGAGAGAAGATTATGA+TGG | + | chr5_2:20166449-20166468 | Msa0762250:intron | 40.0% | |
| TCGGTCCTTCAAATAAGACT+CGG | - | chr5_2:20166981-20167000 | None:intergenic | 40.0% | |
| !! | TGATTCCCAAGAGTTTTGTG+TGG | + | chr5_2:20167110-20167129 | Msa0762250:intron | 40.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+AGG | + | chr5_2:20167177-20167196 | Msa0762250:intron | 40.0% |
| !!! | TTTTTTTTTGGTGGTGGCCA+GGG | + | chr5_2:20167178-20167197 | Msa0762250:intron | 40.0% |
| TCTGCTGTTATGTGGAGATT+TGG | - | chr5_2:20167690-20167709 | None:intergenic | 40.0% | |
| !!! | TGAGGTTTTTGGTTCAAGTG+TGG | - | chr5_2:20167715-20167734 | None:intergenic | 40.0% |
| GCAGACGATAGATAGATGTT+TGG | - | chr5_2:20167764-20167783 | None:intergenic | 40.0% | |
| AGTATGATGGTCATTTGGAG+GGG | - | chr5_2:20167801-20167820 | None:intergenic | 40.0% | |
| ! | TTTTACTGAACTTGCAGGGA+AGG | + | chr5_2:20168056-20168075 | Msa0762250:intron | 40.0% |
| CACTTGTATGTGTTAGGTGA+CGG | + | chr5_2:20168325-20168344 | Msa0762250:intron | 40.0% | |
| !! | TAGGTGACGGACATGTTTAA+TGG | + | chr5_2:20168338-20168357 | Msa0762250:intron | 40.0% |
| AGGAGTTGAATATGAGAACG+TGG | + | chr5_2:20168373-20168392 | Msa0762250:CDS | 40.0% | |
| CACTGAAGAAGGTCAATCTT+CGG | + | chr5_2:20168397-20168416 | Msa0762250:CDS | 40.0% | |
| TCAGACACCTCACTCAAATT+GGG | + | chr5_2:20168473-20168492 | Msa0762250:CDS | 40.0% | |
| AACTAACCCCAATTTGAGTG+AGG | - | chr5_2:20168483-20168502 | None:intergenic | 40.0% | |
| CTAGACTTTGCATATGGCAA+TGG | + | chr5_2:20168640-20168659 | Msa0762250:intron | 40.0% | |
| GGAAAAATACAGATGCAACC+TGG | - | chr5_2:20169218-20169237 | None:intergenic | 40.0% | |
| AATTGTGTTGTGGGTGGTGA+GGG | - | chr5_2:20163046-20163065 | None:intergenic | 45.0% | |
| AAATTGTGTTGTGGGTGGTG+AGG | - | chr5_2:20163047-20163066 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | - | chr5_2:20163738-20163757 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | + | chr5_2:20163930-20163949 | Msa0762250:intron | 45.0% | |
| ATTATCTCACGGCCAAACTC+CGG | + | chr5_2:20164213-20164232 | Msa0762250:intron | 45.0% | |
| ! | GACTTTGGTAATCCGGAGTT+TGG | - | chr5_2:20164228-20164247 | None:intergenic | 45.0% |
| TGGTAAAGACCCTACCAATG+TGG | - | chr5_2:20164540-20164559 | None:intergenic | 45.0% | |
| !! | CCACATTGGAGGTACCTATT+AGG | - | chr5_2:20164577-20164596 | None:intergenic | 45.0% |
| CCTAATAGGTACCTCCAATG+TGG | + | chr5_2:20164574-20164593 | Msa0762250:intron | 45.0% | |
| AGGGTCTTAAGTTAGACCCT+GGG | - | chr5_2:20164626-20164645 | None:intergenic | 45.0% | |
| ! | CATGCTTAGAGCATCCACAA+TGG | - | chr5_2:20164873-20164892 | None:intergenic | 45.0% |
| TGCTTACACAGCCTAAGTCT+AGG | + | chr5_2:20164947-20164966 | Msa0762250:intron | 45.0% | |
| !! | GTGTTTGGTGTCCTAGACTT+AGG | - | chr5_2:20164961-20164980 | None:intergenic | 45.0% |
| TTTCCAATCAGCTCCGTGTT+TGG | - | chr5_2:20164976-20164995 | None:intergenic | 45.0% | |
| ! | GTTAGCTTCTCAAATGTGCG+AGG | + | chr5_2:20165614-20165633 | Msa0762250:intron | 45.0% |
| ! | CAACTGTTCTAGACTGAGCA+AGG | + | chr5_2:20166222-20166241 | Msa0762250:CDS | 45.0% |
| GCCATCAATTAAGGCAGATG+AGG | + | chr5_2:20166260-20166279 | Msa0762250:CDS | 45.0% | |
| CCCTCATCTGCCTTAATTGA+TGG | - | chr5_2:20166264-20166283 | None:intergenic | 45.0% | |
| GAAGTCTCTTGAAACTGGGT+TGG | + | chr5_2:20166330-20166349 | Msa0762250:CDS | 45.0% | |
| TCAGCGTCCTCTATAAAGTC+TGG | - | chr5_2:20167420-20167439 | None:intergenic | 45.0% | |
| !! | TTTCGGAGTTGGCTTGAATG+AGG | - | chr5_2:20167661-20167680 | None:intergenic | 45.0% |
| GTGTGGTTTCTGCTGTTATG+TGG | - | chr5_2:20167698-20167717 | None:intergenic | 45.0% | |
| GTATGATGGTCATTTGGAGG+GGG | - | chr5_2:20167800-20167819 | None:intergenic | 45.0% | |
| CTCAGACACCTCACTCAAAT+TGG | + | chr5_2:20168472-20168491 | Msa0762250:CDS | 45.0% | |
| CAGACACCTCACTCAAATTG+GGG | + | chr5_2:20168474-20168493 | Msa0762250:CDS | 45.0% | |
| ! | TCCATATGCTGGCTGATAGT+AGG | + | chr5_2:20169505-20169524 | Msa0762250:exon | 45.0% |
| ACCTACTATCAGCCAGCATA+TGG | - | chr5_2:20169509-20169528 | None:intergenic | 45.0% | |
| CTGATAGTAGGTTTGTGCGA+GGG | + | chr5_2:20169517-20169536 | Msa0762250:exon | 45.0% | |
| !! | AAAACAATAAAATAATTTAA+GGG | + | chr5_2:20164993-20165012 | Msa0762250:intron | 5.0% |
| !!! | AAAACTAATATTTTTTTTTT+TGG | + | chr5_2:20167166-20167185 | Msa0762250:intron | 5.0% |
| !! | ATAAAAAAAGAAAAAAAAAT+GGG | - | chr5_2:20168853-20168872 | None:intergenic | 5.0% |
| AGATTGAAAACGCAACGGCG+AGG | + | chr5_2:20163478-20163497 | Msa0762250:five_prime_UTR | 50.0% | |
| TAGTATTACTCCCTCCGTCC+CGG | + | chr5_2:20163721-20163740 | Msa0762250:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | - | chr5_2:20163734-20163753 | None:intergenic | 50.0% | |
| GAGGGTCTTAAGTTAGACCC+TGG | - | chr5_2:20164627-20164646 | None:intergenic | 50.0% | |
| TGGGGTCCACGTAAGATTGA+GGG | - | chr5_2:20164645-20164664 | None:intergenic | 50.0% | |
| GTTCTTAAACGGGTCCCACA+TGG | - | chr5_2:20164834-20164853 | None:intergenic | 50.0% | |
| ACACCAAACACGGAGCTGAT+TGG | + | chr5_2:20164970-20164989 | Msa0762250:intron | 50.0% | |
| !! | ACCACTGAAGGTATCTGTGC+TGG | + | chr5_2:20165529-20165548 | Msa0762250:intron | 50.0% |
| !! | TGAAGGTATCTGTGCTGGCA+TGG | + | chr5_2:20165534-20165553 | Msa0762250:intron | 50.0% |
| ATTAAGGCAGATGAGGGGAG+AGG | + | chr5_2:20166267-20166286 | Msa0762250:CDS | 50.0% | |
| GGATCTCCAAGGTTTGAGTC+TGG | + | chr5_2:20166288-20166307 | Msa0762250:CDS | 50.0% | |
| GGGCCGTGTAATTGAAACCA+AGG | + | chr5_2:20166351-20166370 | Msa0762250:CDS | 50.0% | |
| AAGGTTCAGGATTCGAACCC+TGG | - | chr5_2:20167198-20167217 | None:intergenic | 50.0% | |
| !! | TCATTTGGAGGGGGTTTTGG+TGG | - | chr5_2:20167791-20167810 | None:intergenic | 50.0% |
| ! | TGGTCATTTGGAGGGGGTTT+TGG | - | chr5_2:20167794-20167813 | None:intergenic | 50.0% |
| GGTGGGATCCAAATGAGTGT+TGG | - | chr5_2:20167901-20167920 | None:intergenic | 50.0% | |
| GAGAACGTGGTCACTGAAGA+AGG | + | chr5_2:20168386-20168405 | Msa0762250:CDS | 50.0% | |
| CAACTCTACTAGTCCTCCAC+AGG | + | chr5_2:20168439-20168458 | Msa0762250:CDS | 50.0% | |
| TCTGAGCTCTCATAGTCCTG+TGG | - | chr5_2:20168458-20168477 | None:intergenic | 50.0% | |
| !! | CATGTGCTATTTGCACCTGC+AGG | + | chr5_2:20169480-20169499 | Msa0762250:intron | 50.0% |
| GCTGATAGTAGGTTTGTGCG+AGG | + | chr5_2:20169516-20169535 | Msa0762250:exon | 50.0% | |
| TGGGTGGTGAGGGTTTGGAA+GGG | - | chr5_2:20163036-20163055 | None:intergenic | 55.0% | |
| TGTTGTGGGTGGTGAGGGTT+TGG | - | chr5_2:20163041-20163060 | None:intergenic | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | - | chr5_2:20163735-20163754 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr5_2:20163934-20163953 | Msa0762250:intron | 55.0% | |
| ATTCAGTACTCCCTCCGTCC+CGG | - | chr5_2:20163947-20163966 | None:intergenic | 55.0% | |
| TTGGGGGTCTCTTAAGACCC+AGG | + | chr5_2:20164606-20164625 | Msa0762250:intron | 55.0% | |
| TGGGGGTCTCTTAAGACCCA+GGG | + | chr5_2:20164607-20164626 | Msa0762250:intron | 55.0% | |
| GTGGGGTCCACGTAAGATTG+AGG | - | chr5_2:20164646-20164665 | None:intergenic | 55.0% | |
| AGAACCGTCGCTAGAGTTGC+AGG | + | chr5_2:20165363-20165382 | Msa0762250:CDS | 55.0% | |
| CCAACCTGCAACTCTAGCGA+CGG | - | chr5_2:20165370-20165389 | None:intergenic | 55.0% | |
| GCCAGCACAGATACCTTCAG+TGG | - | chr5_2:20165533-20165552 | None:intergenic | 55.0% | |
| GCTTCTCAAATGTGCGAGGG+TGG | + | chr5_2:20165618-20165637 | Msa0762250:intron | 55.0% | |
| ATGAGGGGAGAGGATCTCCA+AGG | + | chr5_2:20166277-20166296 | Msa0762250:CDS | 55.0% | |
| CTTGCAGGGAAGGCAACTGA+TGG | + | chr5_2:20168066-20168085 | Msa0762250:intron | 55.0% | |
| GAGCTCTCATAGTCCTGTGG+AGG | - | chr5_2:20168455-20168474 | None:intergenic | 55.0% | |
| ACCTGCAGGCTTCCATATGC+TGG | + | chr5_2:20169494-20169513 | Msa0762250:intron | 55.0% | |
| GTGGGTGGTGAGGGTTTGGA+AGG | - | chr5_2:20163037-20163056 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr5_2:20163933-20163952 | Msa0762250:intron | 60.0% | |
| CCGTCGCTAGAGTTGCAGGT+TGG | + | chr5_2:20165367-20165386 | Msa0762250:intron | 60.0% | |
| GCCAGCATATGGAAGCCTGC+AGG | - | chr5_2:20169498-20169517 | None:intergenic | 60.0% | |
| GGGGCGCGAGAGCTAACAAG+TGG | + | chr5_2:20165913-20165932 | Msa0762250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 20162863 | 20169777 | 20162863 | ID=Msa0762250;Name=Msa0762250 |
| chr5_2 | mRNA | 20162863 | 20169777 | 20162863 | ID=Msa0762250-mRNA-1;Parent=Msa0762250;Name=Msa0762250-mRNA-1;_AED=0.13;_eAED=0.13;_QI=736|1|1|1|0.62|0.44|9|237|166 |
| chr5_2 | exon | 20162863 | 20163302 | 20162863 | ID=Msa0762250-mRNA-1:exon:8534;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20163425 | 20163631 | 20163425 | ID=Msa0762250-mRNA-1:exon:8535;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20165218 | 20165384 | 20165218 | ID=Msa0762250-mRNA-1:exon:8536;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20166208 | 20166372 | 20166208 | ID=Msa0762250-mRNA-1:exon:8537;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20166453 | 20166494 | 20166453 | ID=Msa0762250-mRNA-1:exon:8538;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20168073 | 20168114 | 20168073 | ID=Msa0762250-mRNA-1:exon:8539;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20168341 | 20168495 | 20168341 | ID=Msa0762250-mRNA-1:exon:8540;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20169502 | 20169538 | 20169502 | ID=Msa0762250-mRNA-1:exon:8541;Parent=Msa0762250-mRNA-1 |
| chr5_2 | exon | 20169559 | 20169777 | 20169559 | ID=Msa0762250-mRNA-1:exon:8542;Parent=Msa0762250-mRNA-1 |
| chr5_2 | five_prime_UTR | 20162863 | 20163302 | 20162863 | ID=Msa0762250-mRNA-1:five_prime_utr;Parent=Msa0762250-mRNA-1 |
| chr5_2 | five_prime_UTR | 20163425 | 20163631 | 20163425 | ID=Msa0762250-mRNA-1:five_prime_utr;Parent=Msa0762250-mRNA-1 |
| chr5_2 | five_prime_UTR | 20165218 | 20165306 | 20165218 | ID=Msa0762250-mRNA-1:five_prime_utr;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20165307 | 20165384 | 20165307 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20166208 | 20166372 | 20166208 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20166453 | 20166494 | 20166453 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20168073 | 20168114 | 20168073 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20168341 | 20168495 | 20168341 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | CDS | 20169502 | 20169520 | 20169502 | ID=Msa0762250-mRNA-1:cds;Parent=Msa0762250-mRNA-1 |
| chr5_2 | three_prime_UTR | 20169521 | 20169538 | 20169521 | ID=Msa0762250-mRNA-1:three_prime_utr;Parent=Msa0762250-mRNA-1 |
| chr5_2 | three_prime_UTR | 20169559 | 20169777 | 20169559 | ID=Msa0762250-mRNA-1:three_prime_utr;Parent=Msa0762250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
