AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0765190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765190 MtrunA17_Chr5g0416091 80.822 292 25 3 1 292 1 261 2.91e-148 416
Msa0765190 MtrunA17_Chr8g0362331 55.856 222 63 2 78 292 74 267 3.76e-79 241
Msa0765190 MtrunA17_Chr7g0274781 35.185 216 98 4 84 292 46 226 1.41e-41 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0765190 AT1G14410.1 53.191 282 84 6 15 292 26 263 1.03e-89 268
Msa0765190 AT2G02740.1 53.282 259 75 6 42 292 48 268 4.22e-82 249
Msa0765190 AT1G71260.1 36.449 214 103 3 84 292 53 238 1.21e-45 154

Find 84 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATTTACTTCTGGCTTTA+TGG 0.135973 5_2:-25758496 None:intergenic
TGAGATGTTAGTATCATTAT+TGG 0.164426 5_2:+25758689 Msa0765190:three_prime_UTR
AAAATTTCTCAAACAATTCT+AGG 0.176337 5_2:-25758667 None:intergenic
GAGTGAGTTGGGACTGAAAA+TGG 0.219662 5_2:-25752594 None:intergenic
AACTACCTTCTTCCCATAAA+AGG 0.254450 5_2:-25756432 None:intergenic
TCTTCTTCTTCCTCCTCTTC+AGG 0.264042 5_2:+25752753 Msa0765190:CDS
GTTTATGTTAGATTAGTAAA+TGG 0.268591 5_2:-25752485 Msa0765180:intron
TGAGGTGGAGGGAATGGTTT+GGG 0.292578 5_2:-25752714 None:intergenic
TTTATCATGCCATGCCTCTT+AGG 0.293213 5_2:+25758453 Msa0765190:CDS
TAAACTATCTGTGGATGAAA+TGG 0.298088 5_2:+25756359 Msa0765190:CDS
CGGTTTGCAATATTTACTTC+TGG 0.305894 5_2:-25758504 None:intergenic
TGGGTTTGTAGTTGTTGAAT+AGG 0.331214 5_2:-25752574 Msa0765180:intron
ACATCCAATGAAGTGAATTC+TGG 0.345501 5_2:-25753024 None:intergenic
TGCAATATTCTAATGACTAT+AGG 0.352382 5_2:+25758573 Msa0765190:three_prime_UTR
TTGAGGTGGAGGGAATGGTT+TGG 0.363411 5_2:-25752715 None:intergenic
AGTCTTCTTCTCTTCTTCTT+CGG 0.365023 5_2:-25758524 None:intergenic
ACCTCCAGAATTCACTTCAT+TGG 0.371286 5_2:+25753020 Msa0765190:CDS
TTTATGTTAGATTAGTAAAT+GGG 0.371848 5_2:-25752484 Msa0765180:intron
GGTTGAGGGCGTTGAGGTGG+AGG 0.372390 5_2:-25752726 None:intergenic
GCTTTCTGCTCCAATCATAT+TGG 0.384421 5_2:-25753238 None:intergenic
GTAACATGTTATGTTATTGA+AGG 0.399175 5_2:-25752438 Msa0765180:intron
GTCCTCAACTCCCTTGAGTT+AGG 0.404708 5_2:-25756101 None:intergenic
ATCCATTTCTTTACCTCGTG+TGG 0.411585 5_2:+25752641 Msa0765190:CDS
AACTGTAATATTATTTGTGC+AGG 0.412475 5_2:+25756139 Msa0765190:CDS
AGGCTGGCGACAAGTGAGGT+TGG 0.414956 5_2:-25752679 None:intergenic
CTACAGTTTGCTCCTTCTGC+CGG 0.434257 5_2:+25753209 Msa0765190:CDS
AGACTTTGAATGGAACAGAT+AGG 0.435531 5_2:+25758542 Msa0765190:CDS
ATGGGAAATCTAATTAATCT+TGG 0.439383 5_2:+25756378 Msa0765190:CDS
GGGCGTTGAGGTGGAGGGAA+TGG 0.441709 5_2:-25752720 None:intergenic
AGTGAGTTGGGACTGAAAAT+GGG 0.444235 5_2:-25752593 None:intergenic
GAAGGTTGAGGGCGTTGAGG+TGG 0.449595 5_2:-25752729 None:intergenic
CGACCAACATAAACCCTTAG+TGG 0.451636 5_2:-25752955 None:intergenic
GAAGAGAAGAAGACTTTGAA+TGG 0.455608 5_2:+25758532 Msa0765190:CDS
GCTGGCGACAAGTGAGGTTG+GGG 0.461449 5_2:-25752677 None:intergenic
AAACTATCTGTGGATGAAAT+GGG 0.464987 5_2:+25756360 Msa0765190:CDS
CCAATCATATTGGCGAAAAC+CGG 0.464995 5_2:-25753228 None:intergenic
GAAGTGAATTCTGGAGGTAC+AGG 0.480485 5_2:-25753015 None:intergenic
TCATGCCATGCCTCTTAGGT+TGG 0.480625 5_2:+25758457 Msa0765190:CDS
CAGTTAGAGAATTGCCACTA+AGG 0.486519 5_2:+25752941 Msa0765190:intron
AACTCAAGGGAGTTGAGGAC+AGG 0.497790 5_2:+25756104 Msa0765190:CDS
ACCCACACGAGGTAAAGAAA+TGG 0.501210 5_2:-25752643 None:intergenic
TTGGTCGTTCAGTTTACAAA+GGG 0.502765 5_2:+25752971 Msa0765190:CDS
TGTTGATGAAAGAGTGAGTT+GGG 0.502987 5_2:-25752605 None:intergenic
GTAGTTGTTGAATAGGATTG+TGG 0.508807 5_2:-25752567 Msa0765180:intron
GTGGAGGGAATGGTTTGGGT+TGG 0.510791 5_2:-25752710 None:intergenic
GAAGAAGGTTGAGGGCGTTG+AGG 0.512207 5_2:-25752732 None:intergenic
GGTTTGGGTTGGAAAAGCTC+AGG 0.523617 5_2:-25752699 None:intergenic
GACTTTGAATGGAACAGATA+GGG 0.528923 5_2:+25758543 Msa0765190:CDS
CAAAGGCATTCCAACCTAAG+AGG 0.533103 5_2:-25758467 None:intergenic
ACTTAGTTTAAACATGTGAC+CGG 0.533326 5_2:-25757297 None:intergenic
ATCTAATTAATCTTGGTGCA+AGG 0.535516 5_2:+25756385 Msa0765190:CDS
AGTTAGAGAATTGCCACTAA+GGG 0.538677 5_2:+25752942 Msa0765190:intron
GAGGAGGAAGAAGAAGAAGA+AGG 0.539040 5_2:-25752747 None:intergenic
TAGTAAATGGGAAATGAGAA+AGG 0.540423 5_2:-25752472 Msa0765180:intron
TCTAATTAATCTTGGTGCAA+GGG 0.543790 5_2:+25756386 Msa0765190:CDS
TCCATTTCTTTACCTCGTGT+GGG 0.547204 5_2:+25752642 Msa0765190:CDS
ATATGATTGGAGCAGAAAGC+AGG 0.558461 5_2:+25753241 Msa0765190:CDS
GTTGTTGAATAGGATTGTGG+TGG 0.559318 5_2:-25752564 Msa0765180:intron
ACATAAACAAGCAAGAAGAA+AGG 0.559941 5_2:+25752500 Msa0765190:five_prime_UTR
GTTGAGGGCGTTGAGGTGGA+GGG 0.560816 5_2:-25752725 None:intergenic
GTCTTGTTATGCAGTGATGA+AGG 0.561694 5_2:+25757230 Msa0765190:intron
GTTAATAAGATCATACAAGA+TGG 0.562596 5_2:-25758609 None:intergenic
TGGCTTTATGGAGTCAGCAA+AGG 0.562818 5_2:-25758484 None:intergenic
ATAACTTCGGACCTAACTCA+AGG 0.572131 5_2:+25756090 Msa0765190:CDS
TGACCGGAACCGTCGTGAAG+TGG 0.576610 5_2:-25757281 None:intergenic
GTTGGTCGTTCAGTTTACAA+AGG 0.578583 5_2:+25752970 Msa0765190:CDS
TGGGTTGGAAAAGCTCAGGC+TGG 0.582714 5_2:-25752695 None:intergenic
GCATTCAAGATATCTAAAGA+AGG 0.582740 5_2:+25753176 Msa0765190:CDS
CAAAGGGAAAGCTGTGCTCA+CGG 0.588472 5_2:+25752987 Msa0765190:CDS
TTGCCACTAAGGGTTTATGT+TGG 0.590045 5_2:+25752952 Msa0765190:CDS
ACAGGTATTTAAACTATCTG+TGG 0.595168 5_2:+25756350 Msa0765190:intron
CTGGCGACAAGTGAGGTTGG+GGG 0.596141 5_2:-25752676 None:intergenic
GACCTAACTCAAGGGAGTTG+AGG 0.601693 5_2:+25756099 Msa0765190:CDS
ACTCTCGAGTTTGATAACTT+CGG 0.602325 5_2:+25756077 Msa0765190:CDS
TATTGGCGAAAACCGGCAGA+AGG 0.609525 5_2:-25753221 None:intergenic
GCATTCCAACCTAAGAGGCA+TGG 0.612818 5_2:-25758462 None:intergenic
ACTCAAGGGAGTTGAGGACA+GGG 0.628075 5_2:+25756105 Msa0765190:CDS
ATTTATCCCTGTCACAAAAG+CGG 0.631693 5_2:+25757496 Msa0765190:CDS
GAGAAAGTGGGACCCACACG+AGG 0.632860 5_2:-25752654 None:intergenic
GCTCAGGCTGGCGACAAGTG+AGG 0.634278 5_2:-25752683 None:intergenic
TCCAATGAAGTGAATTCTGG+AGG 0.645641 5_2:-25753021 None:intergenic
TAACTTCGGACCTAACTCAA+GGG 0.669126 5_2:+25756091 Msa0765190:CDS
TTGTTGATGAAAGAGTGAGT+TGG 0.670091 5_2:-25752606 None:intergenic
AAGGTGGAGCCACTTCACGA+CGG 0.712557 5_2:+25757272 Msa0765190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAATAAAGAAAG+GGG + chr5_2:25753924-25753943 Msa0765190:intron 10.0%
!!! CTTTATAATTTTAAAGAATT+TGG + chr5_2:25757027-25757046 Msa0765190:intron 10.0%
!! CAATAAATATTTACTATTTA+TGG + chr5_2:25757142-25757161 Msa0765190:intron 10.0%
!!! CAAATTTTGTAAAATTATAA+AGG - chr5_2:25757203-25757222 None:intergenic 10.0%
!! TTTATGTTAGATTAGTAAAT+GGG - chr5_2:25752487-25752506 Msa0765180:intron 15.0%
!!! GTTTTTTTTTGTTTAATCAT+AGG + chr5_2:25753049-25753068 Msa0765190:intron 15.0%
!!! TTTAAACCTATTTTCTATTA+TGG + chr5_2:25754764-25754783 Msa0765190:intron 15.0%
!! AAACTTTAGTTATGATTAAT+TGG + chr5_2:25755118-25755137 Msa0765190:intron 15.0%
!!! ATAAAAATTTGAATGTTTTG+AGG + chr5_2:25755177-25755196 Msa0765190:intron 15.0%
!!! AATATACAACATTTTAACTT+AGG - chr5_2:25755851-25755870 None:intergenic 15.0%
!! ATTCAGTAAAATAATTAGAA+GGG - chr5_2:25756469-25756488 None:intergenic 15.0%
!!! AGCATTATTTTTTTTTAAAC+AGG - chr5_2:25756947-25756966 None:intergenic 15.0%
!!! ATTGAATACTTTTAACTATT+CGG - chr5_2:25756976-25756995 None:intergenic 15.0%
!!! AATTTTAAAGAATTTGGAAA+AGG + chr5_2:25757033-25757052 Msa0765190:intron 15.0%
!! AAATTGTTAATATATACTCT+TGG + chr5_2:25757371-25757390 Msa0765190:intron 15.0%
!! GTTTATGTTAGATTAGTAAA+TGG - chr5_2:25752488-25752507 Msa0765180:intron 20.0%
!!! TTTTTTATTTTTACCTGAAG+AGG - chr5_2:25752769-25752788 None:intergenic 20.0%
!!! AATTATTGTTTTCATCATCA+TGG + chr5_2:25752859-25752878 Msa0765190:intron 20.0%
!!! TCTAAATTTCTCATGTTTTA+TGG + chr5_2:25753091-25753110 Msa0765190:intron 20.0%
!! TTAGACTGTTTATTTAGTTA+TGG + chr5_2:25753125-25753144 Msa0765190:intron 20.0%
!! GTTATTGTTCTTCTATAATT+TGG + chr5_2:25753267-25753286 Msa0765190:intron 20.0%
!! GTTTGTAAAAAAATTGCTAT+TGG + chr5_2:25753760-25753779 Msa0765190:intron 20.0%
!!! TGAAAGAGTCTAAAATTTAA+TGG + chr5_2:25755303-25755322 Msa0765190:intron 20.0%
!!! TTTCATTTTAAACATATCTC+CGG - chr5_2:25755345-25755364 None:intergenic 20.0%
!! ATTATTCAGATATTGCATTT+CGG - chr5_2:25755393-25755412 None:intergenic 20.0%
!! AATGCAATATCTGAATAATA+AGG + chr5_2:25755394-25755413 Msa0765190:intron 20.0%
!! ACTGTAATATTATTTATGCA+TGG + chr5_2:25756044-25756063 Msa0765190:intron 20.0%
!! CTGTAATATTATTTATGCAT+GGG + chr5_2:25756045-25756064 Msa0765190:intron 20.0%
!! TTTACAAAATGTACTATACA+AGG - chr5_2:25756232-25756251 None:intergenic 20.0%
!! CATTCAGTAAAATAATTAGA+AGG - chr5_2:25756470-25756489 None:intergenic 20.0%
!! TATGCTATAAACACTTAATT+AGG + chr5_2:25756848-25756867 Msa0765190:intron 20.0%
!!! TAAAGTGAGAAAAGTTTTAA+AGG + chr5_2:25757253-25757272 Msa0765190:CDS 20.0%
!!! AAACTTTTTCTAAAATAAGC+TGG - chr5_2:25757670-25757689 None:intergenic 20.0%
!! AGTAAAAAAAACTACATGTA+TGG - chr5_2:25757973-25757992 None:intergenic 20.0%
!! AGTAAAAAAAACTACATGTA+TGG - chr5_2:25757973-25757992 None:intergenic 20.0%
!! AGTAAAAAAAACTACATGTA+TGG - chr5_2:25757973-25757992 None:intergenic 20.0%
!! ATAAAAAATTAAAACATGCC+CGG + chr5_2:25758164-25758183 Msa0765190:intron 20.0%
!!! TGTTTTTTAATGTAGCTTTT+AGG + chr5_2:25758251-25758270 Msa0765190:intron 20.0%
!! AAAATTTCTCAAACAATTCT+AGG - chr5_2:25758670-25758689 None:intergenic 20.0%
! GTAACATGTTATGTTATTGA+AGG - chr5_2:25752441-25752460 Msa0765180:intron 25.0%
!!! GGTAAAGAAATGGATTTTTT+GGG - chr5_2:25752636-25752655 None:intergenic 25.0%
!!! AGGTAAAGAAATGGATTTTT+TGG - chr5_2:25752637-25752656 None:intergenic 25.0%
!! TAACTTGTGACATACAATAA+TGG + chr5_2:25752817-25752836 Msa0765190:intron 25.0%
! AACTTGTGACATACAATAAT+GGG + chr5_2:25752818-25752837 Msa0765190:intron 25.0%
!! GTACTTATTTATTAGTCTCT+TGG + chr5_2:25753610-25753629 Msa0765190:intron 25.0%
! CAAAAAATGGTGTAAATGTA+GGG - chr5_2:25753696-25753715 None:intergenic 25.0%
!!! CAATTTTTTTACAAACTGCA+GGG - chr5_2:25754668-25754687 None:intergenic 25.0%
!!! CAATTTTTTTACAAACTGCA+GGG + chr5_2:25754668-25754687 Msa0765190:intron 25.0%
! AATAGGTTTAAATGTGTCAT+TGG - chr5_2:25754756-25754775 None:intergenic 25.0%
! TTGATGCCATAATAGAAAAT+AGG - chr5_2:25754773-25754792 None:intergenic 25.0%
!! TCATAACTAAAGTTTTCGTA+GGG - chr5_2:25755113-25755132 None:intergenic 25.0%
!! ATCATAACTAAAGTTTTCGT+AGG - chr5_2:25755114-25755133 None:intergenic 25.0%
!! TTCATTTTAAACATATCTCC+GGG - chr5_2:25755344-25755363 None:intergenic 25.0%
! AAATATTCTGCAAGCAAAAT+GGG - chr5_2:25755801-25755820 None:intergenic 25.0%
! TAAATATTCTGCAAGCAAAA+TGG - chr5_2:25755802-25755821 None:intergenic 25.0%
! AACTGTAATATTATTTGTGC+AGG + chr5_2:25756139-25756158 Msa0765190:CDS 25.0%
! ATTACGTAAAAGCAAATTGA+TGG - chr5_2:25756310-25756329 None:intergenic 25.0%
! ATGGGAAATCTAATTAATCT+TGG + chr5_2:25756378-25756397 Msa0765190:CDS 25.0%
!!! ATTTTTTCACGATCCTTTTA+TGG + chr5_2:25756419-25756438 Msa0765190:CDS 25.0%
!!! TTTTTTCACGATCCTTTTAT+GGG + chr5_2:25756420-25756439 Msa0765190:CDS 25.0%
!!! GCTATTTTCATTAACTATTC+TGG - chr5_2:25756742-25756761 None:intergenic 25.0%
! GAAAAGGATAACATATGTTA+AGG + chr5_2:25757049-25757068 Msa0765190:intron 25.0%
!! CAACTCTTTGAGAAATAAAT+TGG - chr5_2:25757107-25757126 None:intergenic 25.0%
! ATATATTAACAATTTCCCGA+TGG - chr5_2:25757366-25757385 None:intergenic 25.0%
! ATTGAAGTTATATTAGTGCA+GGG - chr5_2:25757411-25757430 None:intergenic 25.0%
! AATTGAAGTTATATTAGTGC+AGG - chr5_2:25757412-25757431 None:intergenic 25.0%
!!! ATTGTTTTGTCAATTTTCGA+AGG + chr5_2:25757437-25757456 Msa0765190:intron 25.0%
!!! ATCTACACTTGAATTTTAGT+GGG - chr5_2:25757626-25757645 None:intergenic 25.0%
!! TATCTACACTTGAATTTTAG+TGG - chr5_2:25757627-25757646 None:intergenic 25.0%
! ATATCACCTTACTTATTTAG+AGG + chr5_2:25757644-25757663 Msa0765190:intron 25.0%
! AAATGTGATTGTATCTTCTA+TGG - chr5_2:25757730-25757749 None:intergenic 25.0%
! AAAACTTGTCTAGCTAAATT+AGG + chr5_2:25757808-25757827 Msa0765190:intron 25.0%
!! GTCTAAGACAGTTTATAATT+AGG + chr5_2:25757892-25757911 Msa0765190:intron 25.0%
! TAATTAGGAATGAAAAGTTC+CGG + chr5_2:25757907-25757926 Msa0765190:intron 25.0%
! AACATTGAATAAACGTAATC+CGG - chr5_2:25757929-25757948 None:intergenic 25.0%
! TTGTGATTCTTGTAAATATG+TGG + chr5_2:25757947-25757966 Msa0765190:intron 25.0%
! AAGCTACATTAAAAAACAAC+TGG - chr5_2:25758249-25758268 None:intergenic 25.0%
!!! AATATTTACTTCTGGCTTTA+TGG - chr5_2:25758499-25758518 None:intergenic 25.0%
! TGCAATATTCTAATGACTAT+AGG + chr5_2:25758573-25758592 Msa0765190:three_prime_UTR 25.0%
! GTTAATAAGATCATACAAGA+TGG - chr5_2:25758612-25758631 None:intergenic 25.0%
! TGAGATGTTAGTATCATTAT+TGG + chr5_2:25758689-25758708 Msa0765190:three_prime_UTR 25.0%
TAGTAAATGGGAAATGAGAA+AGG - chr5_2:25752475-25752494 Msa0765180:intron 30.0%
ACATAAACAAGCAAGAAGAA+AGG + chr5_2:25752500-25752519 Msa0765190:five_prime_UTR 30.0%
!!! TTTATTTTTACCTGAAGAGG+AGG - chr5_2:25752766-25752785 None:intergenic 30.0%
!! TTTTGTGTGTTTTTGTAGTC+AGG + chr5_2:25753152-25753171 Msa0765190:intron 30.0%
!! TTTGTGTGTTTTTGTAGTCA+GGG + chr5_2:25753153-25753172 Msa0765190:intron 30.0%
GCATTCAAGATATCTAAAGA+AGG + chr5_2:25753176-25753195 Msa0765190:CDS 30.0%
!! GTTCTTCTATAATTTGGTGT+CGG + chr5_2:25753273-25753292 Msa0765190:intron 30.0%
CTTAGTGGAATTTGAACAAA+CGG + chr5_2:25753364-25753383 Msa0765190:intron 30.0%
TTGTACTAAATCTAGTATCG+CGG - chr5_2:25753398-25753417 None:intergenic 30.0%
AGTACAATGCTGTCAAATAT+TGG + chr5_2:25753411-25753430 Msa0765190:intron 30.0%
! TGTCAAATATTGGCTACTAT+AGG + chr5_2:25753421-25753440 Msa0765190:intron 30.0%
AAATCCAATGTTGTCAATTG+TGG - chr5_2:25753589-25753608 None:intergenic 30.0%
TCTAGGTTTAAATGTGTCAT+TGG + chr5_2:25753669-25753688 Msa0765190:intron 30.0%
CCAAAAAATGGTGTAAATGT+AGG - chr5_2:25753697-25753716 None:intergenic 30.0%
!!! CCTACATTTACACCATTTTT+TGG + chr5_2:25753694-25753713 Msa0765190:intron 30.0%
!!! GCAATTTTTTTACAAACTGC+AGG - chr5_2:25754667-25754686 None:intergenic 30.0%
AAAACACGATACAAAGAGAT+AGG + chr5_2:25753960-25753979 Msa0765190:intron 30.0%
AAACACGATACAAAGAGATA+GGG + chr5_2:25753961-25753980 Msa0765190:intron 30.0%
ATTACACTGAAGTAGAATCA+TGG - chr5_2:25754138-25754157 None:intergenic 30.0%
TGATATGCAGTCCTTAAAAT+TGG + chr5_2:25754371-25754390 Msa0765190:intron 30.0%
! GATTTGAGCATCCAATTTTA+AGG - chr5_2:25754385-25754404 None:intergenic 30.0%
TTTAACAGCAGTTTAACAGA+AGG + chr5_2:25754637-25754656 Msa0765190:intron 30.0%
!!! GCAATTTTTTTACAAACTGC+AGG + chr5_2:25754667-25754686 Msa0765190:intron 30.0%
!!! CCTTGCACTTTTTTTTTGTT+TGG - chr5_2:25754701-25754720 None:intergenic 30.0%
! CCAAACAAAAAAAAAGTGCA+AGG + chr5_2:25754698-25754717 Msa0765190:intron 30.0%
CAAAAAATGGTGTAAATGCA+GGG + chr5_2:25754729-25754748 Msa0765190:intron 30.0%
CTACATGTTATATCTTCAGT+GGG - chr5_2:25754797-25754816 None:intergenic 30.0%
TCTACATGTTATATCTTCAG+TGG - chr5_2:25754798-25754817 None:intergenic 30.0%
!!! TGATCCTACTTAGTTTTGAA+TGG + chr5_2:25755224-25755243 Msa0765190:intron 30.0%
ATAGCCATTCAAAACTAAGT+AGG - chr5_2:25755231-25755250 None:intergenic 30.0%
AGTTAACTCACAGAAATGTA+CGG + chr5_2:25755267-25755286 Msa0765190:intron 30.0%
!!! TGGTTAGTTTTTTTTCTTCC+CGG + chr5_2:25755323-25755342 Msa0765190:intron 30.0%
!! TAGGAACTAAGAAGTACTAT+GGG - chr5_2:25755518-25755537 None:intergenic 30.0%
TGTCACAATTCGAAATTGAT+AGG - chr5_2:25755771-25755790 None:intergenic 30.0%
GCATATAATCTCTGTAAGAT+TGG - chr5_2:25755946-25755965 None:intergenic 30.0%
TCTTACAGAGATTATATGCA+TGG + chr5_2:25755947-25755966 Msa0765190:intron 30.0%
CTTACAGAGATTATATGCAT+GGG + chr5_2:25755948-25755967 Msa0765190:intron 30.0%
! AGTCTTGAGTTTGATAACTT+TGG + chr5_2:25755980-25755999 Msa0765190:intron 30.0%
TCACCAAACATAAGCAAAAA+CGG - chr5_2:25756175-25756194 None:intergenic 30.0%
! GCTTATGTTTGGTGAAATTA+AGG + chr5_2:25756180-25756199 Msa0765190:intron 30.0%
ACAGGTATTTAAACTATCTG+TGG + chr5_2:25756350-25756369 Msa0765190:intron 30.0%
TAAACTATCTGTGGATGAAA+TGG + chr5_2:25756359-25756378 Msa0765190:CDS 30.0%
AAACTATCTGTGGATGAAAT+GGG + chr5_2:25756360-25756379 Msa0765190:CDS 30.0%
! ATCTAATTAATCTTGGTGCA+AGG + chr5_2:25756385-25756404 Msa0765190:CDS 30.0%
! TCTAATTAATCTTGGTGCAA+GGG + chr5_2:25756386-25756405 Msa0765190:CDS 30.0%
ATAGACTTTCCTTCTCAAAT+AGG + chr5_2:25756547-25756566 Msa0765190:intron 30.0%
TGGTGTCTTCAAATATGTAA+TGG + chr5_2:25756581-25756600 Msa0765190:intron 30.0%
CTTCAAATATGTAATGGTCA+CGG + chr5_2:25756587-25756606 Msa0765190:intron 30.0%
TTCAAATATGTAATGGTCAC+GGG + chr5_2:25756588-25756607 Msa0765190:intron 30.0%
TCAAATAACACAATCCAAAC+AGG - chr5_2:25756614-25756633 None:intergenic 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr5_2:25756707-25756726 None:intergenic 30.0%
GTCATGCTAACATTAAATCA+CGG - chr5_2:25757006-25757025 None:intergenic 30.0%
TATGGAATCCTTAACATGTA+AGG + chr5_2:25757160-25757179 Msa0765190:intron 30.0%
ATGGAATCCTTAACATGTAA+GGG + chr5_2:25757161-25757180 Msa0765190:intron 30.0%
!!! AGTGAGAAAAGTTTTAAAGG+TGG + chr5_2:25757256-25757275 Msa0765190:CDS 30.0%
ACTTAGTTTAAACATGTGAC+CGG - chr5_2:25757300-25757319 None:intergenic 30.0%
TTGAATCAAAACAAAGGTAG+GGG - chr5_2:25757586-25757605 None:intergenic 30.0%
CTTGAATCAAAACAAAGGTA+GGG - chr5_2:25757587-25757606 None:intergenic 30.0%
ACTTGAATCAAAACAAAGGT+AGG - chr5_2:25757588-25757607 None:intergenic 30.0%
ACACACTTGAATCAAAACAA+AGG - chr5_2:25757592-25757611 None:intergenic 30.0%
! TTAAAAAACAACTGGTTTCG+TGG - chr5_2:25758241-25758260 None:intergenic 30.0%
GTAGTTGTTGAATAGGATTG+TGG - chr5_2:25752570-25752589 Msa0765180:intron 35.0%
TGGGTTTGTAGTTGTTGAAT+AGG - chr5_2:25752577-25752596 Msa0765180:intron 35.0%
! TGTTGATGAAAGAGTGAGTT+GGG - chr5_2:25752608-25752627 None:intergenic 35.0%
! TTGTTGATGAAAGAGTGAGT+TGG - chr5_2:25752609-25752628 None:intergenic 35.0%
AAGAAGAAGAAGAAGGTTGA+GGG - chr5_2:25752743-25752762 None:intergenic 35.0%
AGTTAGAGAATTGCCACTAA+GGG + chr5_2:25752942-25752961 Msa0765190:intron 35.0%
TTGGTCGTTCAGTTTACAAA+GGG + chr5_2:25752971-25752990 Msa0765190:CDS 35.0%
ACATCCAATGAAGTGAATTC+TGG - chr5_2:25753027-25753046 None:intergenic 35.0%
!! TTGTGTGTTTTTGTAGTCAG+GGG + chr5_2:25753154-25753173 Msa0765190:intron 35.0%
! ATAGCTGCTATTTGACAACA+CGG - chr5_2:25753342-25753361 None:intergenic 35.0%
AAATAGCAGCTATTGCTTAG+TGG + chr5_2:25753349-25753368 Msa0765190:intron 35.0%
TGATCCACAATTGACAACAT+TGG + chr5_2:25753582-25753601 Msa0765190:intron 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG + chr5_2:25753723-25753742 Msa0765190:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG - chr5_2:25753727-25753746 None:intergenic 35.0%
! AGCCAAACAAAAAAAAGTGC+AGG - chr5_2:25753728-25753747 None:intergenic 35.0%
TTTAACAGCGGTTTAACAGA+AGG - chr5_2:25753787-25753806 None:intergenic 35.0%
ACCGCTGTTAAAAAAACAGA+CGG + chr5_2:25753795-25753814 Msa0765190:intron 35.0%
!!! TCCGTCTGTTTTTTTAACAG+CGG - chr5_2:25753799-25753818 None:intergenic 35.0%
AACACGATACAAAGAGATAG+GGG + chr5_2:25753962-25753981 Msa0765190:intron 35.0%
AATTGCAATCGCACAAATCT+TGG - chr5_2:25754333-25754352 None:intergenic 35.0%
ATGCTCAAATCAGAACTCAA+AGG + chr5_2:25754394-25754413 Msa0765190:intron 35.0%
TGCTCAAATCAGAACTCAAA+GGG + chr5_2:25754395-25754414 Msa0765190:intron 35.0%
CAGTTTAACAGAAGGATCAA+TGG + chr5_2:25754645-25754664 Msa0765190:intron 35.0%
CAAGGACTGAAACCAAAAAA+TGG + chr5_2:25754716-25754735 Msa0765190:intron 35.0%
!!! CCTGCATTTACACCATTTTT+TGG - chr5_2:25754731-25754750 None:intergenic 35.0%
CCAAAAAATGGTGTAAATGC+AGG + chr5_2:25754728-25754747 Msa0765190:intron 35.0%
TACCAGCAGCAATTAAGATT+TGG - chr5_2:25754892-25754911 None:intergenic 35.0%
TTGTGTCACGGGAAAATTTA+AGG - chr5_2:25754925-25754944 None:intergenic 35.0%
TGAAGAGAAAGTTTGTGTCA+CGG - chr5_2:25754937-25754956 None:intergenic 35.0%
GTTAACTCACAGAAATGTAC+GGG + chr5_2:25755268-25755287 Msa0765190:intron 35.0%
!! CTAGGAACTAAGAAGTACTA+TGG - chr5_2:25755519-25755538 None:intergenic 35.0%
TAGAAACATGAACAAACCCA+CGG + chr5_2:25755558-25755577 Msa0765190:intron 35.0%
AGTTTGCAATGAATCCAATG+AGG + chr5_2:25755586-25755605 Msa0765190:intron 35.0%
ATGAATCCAATGAGGCAATA+AGG + chr5_2:25755594-25755613 Msa0765190:intron 35.0%
AAGAATGCACAAAAGAACGA+AGG - chr5_2:25755695-25755714 None:intergenic 35.0%
TTGTGACACTATGTATTCTC+TGG + chr5_2:25755727-25755746 Msa0765190:intron 35.0%
ATAACTTTGGACCTAACTCA+AGG + chr5_2:25755993-25756012 Msa0765190:intron 35.0%
TAACTTTGGACCTAACTCAA+GGG + chr5_2:25755994-25756013 Msa0765190:intron 35.0%
! ACTCTCGAGTTTGATAACTT+CGG + chr5_2:25756077-25756096 Msa0765190:CDS 35.0%
!! GTTCCGTTTTTGCTTATGTT+TGG + chr5_2:25756169-25756188 Msa0765190:intron 35.0%
! TCATATCAGTTGCTACTTGT+TGG - chr5_2:25756283-25756302 None:intergenic 35.0%
AACTACCTTCTTCCCATAAA+AGG - chr5_2:25756435-25756454 None:intergenic 35.0%
ACTTTCCTTCTCAAATAGGA+AGG + chr5_2:25756551-25756570 Msa0765190:intron 35.0%
CTTTCCTTCTCAAATAGGAA+GGG + chr5_2:25756552-25756571 Msa0765190:intron 35.0%
AAATCCCTTCCTATTTGAGA+AGG - chr5_2:25756559-25756578 None:intergenic 35.0%
TTCTCAAATAGGAAGGGATT+TGG + chr5_2:25756558-25756577 Msa0765190:intron 35.0%
! GAAAACAGCTTATGGTCTTA+TGG - chr5_2:25756699-25756718 None:intergenic 35.0%
ATTAGGCTGTTTATCCAAAC+AGG + chr5_2:25756865-25756884 Msa0765190:intron 35.0%
TTAGGCTGTTTATCCAAACA+GGG + chr5_2:25756866-25756885 Msa0765190:intron 35.0%
GCGTATGAATCTGCATATAT+GGG - chr5_2:25756892-25756911 None:intergenic 35.0%
TGCGTATGAATCTGCATATA+TGG - chr5_2:25756893-25756912 None:intergenic 35.0%
AATATGTACTTCCCTTCCAT+CGG + chr5_2:25757347-25757366 Msa0765190:intron 35.0%
TTAACAATTTCCCGATGGAA+GGG - chr5_2:25757361-25757380 None:intergenic 35.0%
ATTAACAATTTCCCGATGGA+AGG - chr5_2:25757362-25757381 None:intergenic 35.0%
ATTTATCCCTGTCACAAAAG+CGG + chr5_2:25757496-25757515 Msa0765190:CDS 35.0%
TGAATCAAAACAAAGGTAGG+GGG - chr5_2:25757585-25757604 None:intergenic 35.0%
! TATGCCATTTGCATAAGAAG+TGG + chr5_2:25757833-25757852 Msa0765190:intron 35.0%
! ATGCCATTTGCATAAGAAGT+GGG + chr5_2:25757834-25757853 Msa0765190:intron 35.0%
GTAATCATTGTATTCAGCTC+TGG + chr5_2:25758294-25758313 Msa0765190:intron 35.0%
AGCAAAAAACATGTTGTCGA+GGG - chr5_2:25758361-25758380 None:intergenic 35.0%
AAGCAAAAAACATGTTGTCG+AGG - chr5_2:25758362-25758381 None:intergenic 35.0%
CGGTTTGCAATATTTACTTC+TGG - chr5_2:25758507-25758526 None:intergenic 35.0%
AGTCTTCTTCTCTTCTTCTT+CGG - chr5_2:25758527-25758546 None:intergenic 35.0%
GAAGAGAAGAAGACTTTGAA+TGG + chr5_2:25758532-25758551 Msa0765190:CDS 35.0%
AGACTTTGAATGGAACAGAT+AGG + chr5_2:25758542-25758561 Msa0765190:CDS 35.0%
GACTTTGAATGGAACAGATA+GGG + chr5_2:25758543-25758562 Msa0765190:CDS 35.0%
GTTGTTGAATAGGATTGTGG+TGG - chr5_2:25752567-25752586 Msa0765180:intron 40.0%
! AGTGAGTTGGGACTGAAAAT+GGG - chr5_2:25752596-25752615 None:intergenic 40.0%
ATCCATTTCTTTACCTCGTG+TGG + chr5_2:25752641-25752660 Msa0765190:CDS 40.0%
TCCATTTCTTTACCTCGTGT+GGG + chr5_2:25752642-25752661 Msa0765190:CDS 40.0%
GAAGAAGAAGAAGAAGGTTG+AGG - chr5_2:25752744-25752763 None:intergenic 40.0%
CAGTTAGAGAATTGCCACTA+AGG + chr5_2:25752941-25752960 Msa0765190:intron 40.0%
TTGCCACTAAGGGTTTATGT+TGG + chr5_2:25752952-25752971 Msa0765190:CDS 40.0%
GTTGGTCGTTCAGTTTACAA+AGG + chr5_2:25752970-25752989 Msa0765190:CDS 40.0%
ACCTCCAGAATTCACTTCAT+TGG + chr5_2:25753020-25753039 Msa0765190:CDS 40.0%
TCCAATGAAGTGAATTCTGG+AGG - chr5_2:25753024-25753043 None:intergenic 40.0%
CCAATCATATTGGCGAAAAC+CGG - chr5_2:25753231-25753250 None:intergenic 40.0%
GCTTTCTGCTCCAATCATAT+TGG - chr5_2:25753241-25753260 None:intergenic 40.0%
ATATGATTGGAGCAGAAAGC+AGG + chr5_2:25753241-25753260 Msa0765190:CDS 40.0%
AGTACAACGTTGTCAAGTAG+CGG + chr5_2:25753498-25753517 Msa0765190:intron 40.0%
CATTGTAGTGCAGTGGAATT+TGG + chr5_2:25753538-25753557 Msa0765190:intron 40.0%
CAGGGACTGAAACCAAAAAA+TGG - chr5_2:25753709-25753728 None:intergenic 40.0%
!!! TTTGTTTTTAGTGAGCCACG+TGG - chr5_2:25753848-25753867 None:intergenic 40.0%
ACACGATACAAAGAGATAGG+GGG + chr5_2:25753963-25753982 Msa0765190:intron 40.0%
TATCACACCAGAAACGAGAA+GGG - chr5_2:25754045-25754064 None:intergenic 40.0%
ATATCACACCAGAAACGAGA+AGG - chr5_2:25754046-25754065 None:intergenic 40.0%
! AAGCCAAATCTGATTCGCTT+TGG - chr5_2:25754179-25754198 None:intergenic 40.0%
GCTTGAAAATATCAGAGCCA+TGG - chr5_2:25754296-25754315 None:intergenic 40.0%
!! GGCTCTGATATTTTCAAGCT+TGG + chr5_2:25754297-25754316 Msa0765190:intron 40.0%
AGGACTGCATATCAATTCTC+AGG - chr5_2:25754365-25754384 None:intergenic 40.0%
AAATCAGAACTCAAAGGGAG+TGG + chr5_2:25754400-25754419 Msa0765190:intron 40.0%
AGTGAACTTAGAGTAGAGAG+AGG + chr5_2:25754434-25754453 Msa0765190:intron 40.0%
TTGAATTTGAGTGCGACCAT+TGG + chr5_2:25754459-25754478 Msa0765190:intron 40.0%
GTAACTGTGTTCATCAGCAA+TGG - chr5_2:25754517-25754536 None:intergenic 40.0%
GACCAAATCTTAATTGCTGC+TGG + chr5_2:25754887-25754906 Msa0765190:intron 40.0%
GAAGAGAAAGTTTGTGTCAC+GGG - chr5_2:25754936-25754955 None:intergenic 40.0%
TAGGGTGAAAAATACACAGC+TGG - chr5_2:25755095-25755114 None:intergenic 40.0%
! CGATGATATTTTGTGCACTG+TGG - chr5_2:25755422-25755441 None:intergenic 40.0%
TGTTCACTTCCTTTGCAGAT+GGG - chr5_2:25755493-25755512 None:intergenic 40.0%
TTGTTCACTTCCTTTGCAGA+TGG - chr5_2:25755494-25755513 None:intergenic 40.0%
CATTCACCTTATTGCCTCAT+TGG - chr5_2:25755603-25755622 None:intergenic 40.0%
ACAAAAGAACGAAGGATGGT+GGG - chr5_2:25755687-25755706 None:intergenic 40.0%
ATGCACAAAAGAACGAAGGA+TGG - chr5_2:25755691-25755710 None:intergenic 40.0%
ATAACTTCGGACCTAACTCA+AGG + chr5_2:25756090-25756109 Msa0765190:CDS 40.0%
TAACTTCGGACCTAACTCAA+GGG + chr5_2:25756091-25756110 Msa0765190:CDS 40.0%
AGTCGTCTTTACTTGAACAC+AGG + chr5_2:25756332-25756351 Msa0765190:intron 40.0%
! ACGATCCTTTTATGGGAAGA+AGG + chr5_2:25756427-25756446 Msa0765190:CDS 40.0%
TCAAATAGGAAGGGATTTGG+TGG + chr5_2:25756561-25756580 Msa0765190:intron 40.0%
ACATGTGCCCTTACATGTTA+AGG - chr5_2:25757171-25757190 None:intergenic 40.0%
! GTCTTGTTATGCAGTGATGA+AGG + chr5_2:25757230-25757249 Msa0765190:intron 40.0%
ATATGTACTTCCCTTCCATC+GGG + chr5_2:25757348-25757367 Msa0765190:intron 40.0%
GAAGTTATATTAGTGCAGGG+TGG - chr5_2:25757408-25757427 None:intergenic 40.0%
! AGCTGGCCTCTAAATAAGTA+AGG - chr5_2:25757653-25757672 None:intergenic 40.0%
! ACAATAAAATTGGCTTCGCC+CGG + chr5_2:25758015-25758034 Msa0765190:intron 40.0%
! ACAATAAAATTGGCTTCGCC+CGG + chr5_2:25758015-25758034 Msa0765190:intron 40.0%
TTTATCATGCCATGCCTCTT+AGG + chr5_2:25758453-25758472 Msa0765190:CDS 40.0%
! GAGTGAGTTGGGACTGAAAA+TGG - chr5_2:25752597-25752616 None:intergenic 45.0%
ACCCACACGAGGTAAAGAAA+TGG - chr5_2:25752646-25752665 None:intergenic 45.0%
GAGGAGGAAGAAGAAGAAGA+AGG - chr5_2:25752750-25752769 None:intergenic 45.0%
TCTTCTTCTTCCTCCTCTTC+AGG + chr5_2:25752753-25752772 Msa0765190:CDS 45.0%
CGACCAACATAAACCCTTAG+TGG - chr5_2:25752958-25752977 None:intergenic 45.0%
! GAAGTGAATTCTGGAGGTAC+AGG - chr5_2:25753018-25753037 None:intergenic 45.0%
! CCGGTTTTCGCCAATATGAT+TGG + chr5_2:25753228-25753247 Msa0765190:CDS 45.0%
GCTATAGCATTGTAGTGCAG+TGG + chr5_2:25753531-25753550 Msa0765190:intron 45.0%
GATACAAAGAGATAGGGGGT+GGG + chr5_2:25753967-25753986 Msa0765190:intron 45.0%
! AGGGGGTGGGAATGAATTTT+AGG + chr5_2:25753980-25753999 Msa0765190:intron 45.0%
! GGGGGTGGGAATGAATTTTA+GGG + chr5_2:25753981-25754000 Msa0765190:intron 45.0%
ACGAGAAGGGAATCGCAAAA+TGG - chr5_2:25754032-25754051 None:intergenic 45.0%
CTGCCAAAGCGAATCAGATT+TGG + chr5_2:25754173-25754192 Msa0765190:intron 45.0%
GCTTCGAGGTTCTCAATTTG+AGG + chr5_2:25754195-25754214 Msa0765190:intron 45.0%
TAGTGAACACCTCTGTTCCA+TGG + chr5_2:25754276-25754295 Msa0765190:intron 45.0%
ATATCAGAGCCATGGAACAG+AGG - chr5_2:25754288-25754307 None:intergenic 45.0%
! TTCATGGACTGCTGAGGAAA+AGG + chr5_2:25754491-25754510 Msa0765190:intron 45.0%
! ACCGAGGATCTTAGTTCTTG+TGG + chr5_2:25754535-25754554 Msa0765190:intron 45.0%
CCCACAAGAACTAAGATCCT+CGG - chr5_2:25754539-25754558 None:intergenic 45.0%
! CCGAGGATCTTAGTTCTTGT+GGG + chr5_2:25754536-25754555 Msa0765190:intron 45.0%
! CGAGGATCTTAGTTCTTGTG+GGG + chr5_2:25754537-25754556 Msa0765190:intron 45.0%
CACAGAAATGTACGGGTTTG+AGG + chr5_2:25755275-25755294 Msa0765190:intron 45.0%
CATTAAGCACCCATCTGCAA+AGG + chr5_2:25755481-25755500 Msa0765190:intron 45.0%
CTTAGTTCCTAGCACAAACG+AGG + chr5_2:25755527-25755546 Msa0765190:intron 45.0%
CATTGCAAACTTGCAACCGT+GGG - chr5_2:25755577-25755596 None:intergenic 45.0%
TCATTGCAAACTTGCAACCG+TGG - chr5_2:25755578-25755597 None:intergenic 45.0%
CACAAAAGAACGAAGGATGG+TGG - chr5_2:25755688-25755707 None:intergenic 45.0%
!! CAAACTCCGCTTTTGTGACA+GGG - chr5_2:25757505-25757524 None:intergenic 45.0%
CCTCCCACTTCTTATGCAAA+TGG - chr5_2:25757840-25757859 None:intergenic 45.0%
CCATTTGCATAAGAAGTGGG+AGG + chr5_2:25757837-25757856 Msa0765190:intron 45.0%
GAAGTGGGAGGAAATCTTCA+AGG + chr5_2:25757849-25757868 Msa0765190:intron 45.0%
TCTAACACACTGAAGGTCTC+CGG - chr5_2:25758197-25758216 None:intergenic 45.0%
ACGTCAGTCTAACACACTGA+AGG - chr5_2:25758204-25758223 None:intergenic 45.0%
! AACTGGTTTCGTGGTGTAGT+TGG - chr5_2:25758232-25758251 None:intergenic 45.0%
!! CAAAGGCATTCCAACCTAAG+AGG - chr5_2:25758470-25758489 None:intergenic 45.0%
!! TGGCTTTATGGAGTCAGCAA+AGG - chr5_2:25758487-25758506 None:intergenic 45.0%
!!! TTATAATATATATATTTTCT+AGG + chr5_2:25753652-25753671 Msa0765190:intron 5.0%
!! TAAAAATAAAAAATAAAGAA+AGG + chr5_2:25753922-25753941 Msa0765190:intron 5.0%
!! AAAAATAAAAAATAAAGAAA+GGG + chr5_2:25753923-25753942 Msa0765190:intron 5.0%
!!! AAATTTTGTAAAATTATAAA+GGG - chr5_2:25757202-25757221 None:intergenic 5.0%
!! AAAAATTAAAACAATAAAAT+TGG + chr5_2:25758005-25758024 Msa0765190:intron 5.0%
!! AAAAATTAAAACAATAAAAT+TGG + chr5_2:25758005-25758024 Msa0765190:intron 5.0%
!! GGTTTGGGTTGGAAAAGCTC+AGG - chr5_2:25752702-25752721 None:intergenic 50.0%
TGAGGTGGAGGGAATGGTTT+GGG - chr5_2:25752717-25752736 None:intergenic 50.0%
TTGAGGTGGAGGGAATGGTT+TGG - chr5_2:25752718-25752737 None:intergenic 50.0%
CAAAGGGAAAGCTGTGCTCA+CGG + chr5_2:25752987-25753006 Msa0765190:CDS 50.0%
! CTACAGTTTGCTCCTTCTGC+CGG + chr5_2:25753209-25753228 Msa0765190:CDS 50.0%
TATTGGCGAAAACCGGCAGA+AGG - chr5_2:25753224-25753243 None:intergenic 50.0%
CGATACAAAGAGATAGGGGG+TGG + chr5_2:25753966-25753985 Msa0765190:intron 50.0%
TGCGATTCCCTTCTCGTTTC+TGG + chr5_2:25754035-25754054 Msa0765190:intron 50.0%
TGATTCGCTTTGGCAGAACG+AGG - chr5_2:25754169-25754188 None:intergenic 50.0%
! GCGAATCAGATTTGGCTTCG+AGG + chr5_2:25754181-25754200 Msa0765190:intron 50.0%
GCTGATGAACACAGTTACCG+AGG + chr5_2:25754519-25754538 Msa0765190:intron 50.0%
TCCTAGCACAAACGAGGTCA+TGG + chr5_2:25755533-25755552 Msa0765190:intron 50.0%
TCCATGACCTCGTTTGTGCT+AGG - chr5_2:25755537-25755556 None:intergenic 50.0%
GGTTTCAGCTAGTCAGAGCT+AGG - chr5_2:25755628-25755647 None:intergenic 50.0%
! TTGGAGCACTTGGAAGAGCT+AGG - chr5_2:25755649-25755668 None:intergenic 50.0%
TCTTCCAAGTGCTCCAACGA+GGG + chr5_2:25755652-25755671 Msa0765190:intron 50.0%
GACCTAACTCAAGGGAGTTG+AGG + chr5_2:25756002-25756021 Msa0765190:intron 50.0%
GTCCTCAACTCCCTTGAGTT+AGG - chr5_2:25756007-25756026 None:intergenic 50.0%
ACTCAAGGGAGTTGAGGACA+AGG + chr5_2:25756008-25756027 Msa0765190:intron 50.0%
CTCAAGGGAGTTGAGGACAA+GGG + chr5_2:25756009-25756028 Msa0765190:intron 50.0%
GACCTAACTCAAGGGAGTTG+AGG + chr5_2:25756002-25756021 Msa0765190:intron 50.0%
GTCCTCAACTCCCTTGAGTT+AGG - chr5_2:25756007-25756026 None:intergenic 50.0%
AACTCAAGGGAGTTGAGGAC+AGG + chr5_2:25756007-25756026 Msa0765190:intron 50.0%
ACTCAAGGGAGTTGAGGACA+GGG + chr5_2:25756008-25756027 Msa0765190:intron 50.0%
CTTGTGAGACTGCTTGAGAG+AGG + chr5_2:25756649-25756668 Msa0765190:intron 50.0%
AGACTGCTTGAGAGAGGTCA+TGG + chr5_2:25756655-25756674 Msa0765190:intron 50.0%
CTGCATATATGGGCCCTGTT+TGG - chr5_2:25756882-25756901 None:intergenic 50.0%
!! GCAAACTCCGCTTTTGTGAC+AGG - chr5_2:25757506-25757525 None:intergenic 50.0%
TCTCTCTCTCTCTCTACCCT+TGG + chr5_2:25757556-25757575 Msa0765190:intron 50.0%
CAAAGCCAATCTTCCGCGAA+TGG + chr5_2:25758334-25758353 Msa0765190:intron 50.0%
TCATGCCATGCCTCTTAGGT+TGG + chr5_2:25758457-25758476 Msa0765190:CDS 50.0%
GCATTCCAACCTAAGAGGCA+TGG - chr5_2:25758465-25758484 None:intergenic 50.0%
GTGAGGTTGGGGGAGAAAGT+GGG - chr5_2:25752669-25752688 None:intergenic 55.0%
AGTGAGGTTGGGGGAGAAAG+TGG - chr5_2:25752670-25752689 None:intergenic 55.0%
! TGGGTTGGAAAAGCTCAGGC+TGG - chr5_2:25752698-25752717 None:intergenic 55.0%
! GTGGAGGGAATGGTTTGGGT+TGG - chr5_2:25752713-25752732 None:intergenic 55.0%
!! GAAGAAGGTTGAGGGCGTTG+AGG - chr5_2:25752735-25752754 None:intergenic 55.0%
AAAACAGACGGAACGCCACG+TGG + chr5_2:25753807-25753826 Msa0765190:intron 55.0%
CGTGCAATAACTGGTCCACG+TGG - chr5_2:25753825-25753844 None:intergenic 55.0%
ACCAGTTATTGCACGCCACG+TGG + chr5_2:25753830-25753849 Msa0765190:intron 55.0%
TTCGCTTTGGCAGAACGAGG+TGG - chr5_2:25754166-25754185 None:intergenic 55.0%
CCATGAACGACTCGCACCAA+TGG - chr5_2:25754478-25754497 None:intergenic 55.0%
CCATTGGTGCGAGTCGTTCA+TGG + chr5_2:25754475-25754494 Msa0765190:intron 55.0%
! GAGTCGTTCATGGACTGCTG+AGG + chr5_2:25754485-25754504 Msa0765190:intron 55.0%
CTCTTCCAAGTGCTCCAACG+AGG + chr5_2:25755651-25755670 Msa0765190:intron 55.0%
CTTCCAAGTGCTCCAACGAG+GGG + chr5_2:25755653-25755672 Msa0765190:intron 55.0%
GTAATGGTCACGGGCCTGTT+TGG + chr5_2:25756597-25756616 Msa0765190:intron 55.0%
AAGGTGGAGCCACTTCACGA+CGG + chr5_2:25757272-25757291 Msa0765190:CDS 55.0%
CAAAGGTAGGGGGTGACCAA+GGG - chr5_2:25757575-25757594 None:intergenic 55.0%
ACAAAGGTAGGGGGTGACCA+AGG - chr5_2:25757576-25757595 None:intergenic 55.0%
TATGGCCACAGTTCGAGTCC+GGG - chr5_2:25758036-25758055 None:intergenic 55.0%
GTATGGCCACAGTTCGAGTC+CGG - chr5_2:25758037-25758056 None:intergenic 55.0%
TATGGCCACAGTTCGAGTCC+GGG - chr5_2:25758036-25758055 None:intergenic 55.0%
GTATGGCCACAGTTCGAGTC+CGG - chr5_2:25758037-25758056 None:intergenic 55.0%
AAACATGCCCGGACTCGAAC+CGG + chr5_2:25758175-25758194 Msa0765190:intron 55.0%
AGGGACCATTCGCGGAAGAT+TGG - chr5_2:25758342-25758361 None:intergenic 55.0%
TGTTGTCGAGGGACCATTCG+CGG - chr5_2:25758350-25758369 None:intergenic 55.0%
GAGAAAGTGGGACCCACACG+AGG - chr5_2:25752657-25752676 None:intergenic 60.0%
CTGGCGACAAGTGAGGTTGG+GGG - chr5_2:25752679-25752698 None:intergenic 60.0%
GCTGGCGACAAGTGAGGTTG+GGG - chr5_2:25752680-25752699 None:intergenic 60.0%
GGCTGGCGACAAGTGAGGTT+GGG - chr5_2:25752681-25752700 None:intergenic 60.0%
AGGCTGGCGACAAGTGAGGT+TGG - chr5_2:25752682-25752701 None:intergenic 60.0%
!! GTTGAGGGCGTTGAGGTGGA+GGG - chr5_2:25752728-25752747 None:intergenic 60.0%
!! GAAGGTTGAGGGCGTTGAGG+TGG - chr5_2:25752732-25752751 None:intergenic 60.0%
GCCACGTGGCGTGCAATAAC+TGG - chr5_2:25753834-25753853 None:intergenic 60.0%
GCTTTGGCAGAACGAGGTGG+AGG - chr5_2:25754163-25754182 None:intergenic 60.0%
! GTTCCCCTCGTTGGAGCACT+TGG - chr5_2:25755659-25755678 None:intergenic 60.0%
TGGGACTGAGTTCCCCTCGT+TGG - chr5_2:25755668-25755687 None:intergenic 60.0%
GAGCCACTTCACGACGGTTC+CGG + chr5_2:25757278-25757297 Msa0765190:CDS 60.0%
TGACCGGAACCGTCGTGAAG+TGG - chr5_2:25757284-25757303 None:intergenic 60.0%
! AAGGTCTCCGGTTCGAGTCC+GGG - chr5_2:25758185-25758204 None:intergenic 60.0%
! GAAGGTCTCCGGTTCGAGTC+CGG - chr5_2:25758186-25758205 None:intergenic 60.0%
GCTCAGGCTGGCGACAAGTG+AGG - chr5_2:25752686-25752705 None:intergenic 65.0%
!! GGGCGTTGAGGTGGAGGGAA+TGG - chr5_2:25752723-25752742 None:intergenic 65.0%
!! GGTTGAGGGCGTTGAGGTGG+AGG - chr5_2:25752729-25752748 None:intergenic 65.0%
CTTCGCCCGGACTCGAACTG+TGG + chr5_2:25758028-25758047 Msa0765190:intron 65.0%
CTTCGCCCGGACTCGAACTG+TGG + chr5_2:25758028-25758047 Msa0765190:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 25752414 25758785 25752414 ID=Msa0765190;Name=Msa0765190
chr5_2 mRNA 25752414 25758785 25752414 ID=Msa0765190-mRNA-1;Parent=Msa0765190;Name=Msa0765190-mRNA-1;_AED=0.14;_eAED=0.14;_QI=129|0.71|0.87|0.87|1|1|8|222|292
chr5_2 exon 25752414 25752774 25752414 ID=Msa0765190-mRNA-1:exon:10333;Parent=Msa0765190-mRNA-1
chr5_2 exon 25752944 25753044 25752944 ID=Msa0765190-mRNA-1:exon:10334;Parent=Msa0765190-mRNA-1
chr5_2 exon 25753170 25753262 25753170 ID=Msa0765190-mRNA-1:exon:10335;Parent=Msa0765190-mRNA-1
chr5_2 exon 25756077 25756160 25756077 ID=Msa0765190-mRNA-1:exon:10336;Parent=Msa0765190-mRNA-1
chr5_2 exon 25756354 25756448 25756354 ID=Msa0765190-mRNA-1:exon:10337;Parent=Msa0765190-mRNA-1
chr5_2 exon 25757244 25757317 25757244 ID=Msa0765190-mRNA-1:exon:10338;Parent=Msa0765190-mRNA-1
chr5_2 exon 25757459 25757547 25757459 ID=Msa0765190-mRNA-1:exon:10339;Parent=Msa0765190-mRNA-1
chr5_2 exon 25758453 25758785 25758453 ID=Msa0765190-mRNA-1:exon:10340;Parent=Msa0765190-mRNA-1
chr5_2 five_prime_UTR 25752414 25752542 25752414 ID=Msa0765190-mRNA-1:five_prime_utr;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25752543 25752774 25752543 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25752944 25753044 25752944 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25753170 25753262 25753170 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25756077 25756160 25756077 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25756354 25756448 25756354 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25757244 25757317 25757244 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25757459 25757547 25757459 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 CDS 25758453 25758563 25758453 ID=Msa0765190-mRNA-1:cds;Parent=Msa0765190-mRNA-1
chr5_2 three_prime_UTR 25758564 25758785 25758564 ID=Msa0765190-mRNA-1:three_prime_utr;Parent=Msa0765190-mRNA-1
Gene Sequence

>Msa0765190

ATGAAGATGTTGCAATTGCAACCACCACAATCCTATTCAACAACTACAAACCCATTTTCAGTCCCAACTCACTCTTTCATCAACAACACTCCCAAAAAATCCATTTCTTTACCTCGTGTGGGTCCCACTTTCTCCCCCAACCTCACTTGTCGCCAGCCTGAGCTTTTCCAACCCAAACCATTCCCTCCACCTCAACGCCCTCAACCTTCTTCTTCTTCTTCCTCCTCTTCAGTTAGAGAATTGCCACTAAGGGTTTATGTTGGTCGTTCAGTTTACAAAGGGAAAGCTGTGCTCACGGTGTCTCCTGTACCTCCAGAATTCACTTCATTGGATTCAGGGGCATTCAAGATATCTAAAGAAGGTTTGATGTTGCTACAGTTTGCTCCTTCTGCCGGTTTTCGCCAATATGATTGGAGCAGAAAGCAGACTCTCGAGTTTGATAACTTCGGACCTAACTCAAGGGAGTTGAGGACAGGGTTATTTTATAAAACTGTAATATTATTTGTGCAGGTATTTAAACTATCTGTGGATGAAATGGGAAATCTAATTAATCTTGGTGCAAGGGAGTCTTGTGAATTTTTTCACGATCCTTTTATGGGAAGAAGTGATGAAGGTAAAGTGAGAAAAGTTTTAAAGGTGGAGCCACTTCACGACGGTTCCGGTCACATGTTTAAACTAAGTGTTCAAAACAAGCTCAAGAACATCGATGAGAACATATTTATCCCTGTCACAAAAGCGGAGTTTGCAGTTTTCAATTCACTTTTCAATTTTATCATGCCATGCCTCTTAGGTTGGAATGCCTTTGCTGACTCCATAAAGCCAGAAGTAAATATTGCAAACCGAAGAAGAAGAGAAGAAGACTTTGAATGGAACAGATAG

Protein sequence

>Msa0765190

MKMLQLQPPQSYSTTTNPFSVPTHSFINNTPKKSISLPRVGPTFSPNLTCRQPELFQPKPFPPPQRPQPSSSSSSSSVRELPLRVYVGRSVYKGKAVLTVSPVPPEFTSLDSGAFKISKEGLMLLQFAPSAGFRQYDWSRKQTLEFDNFGPNSRELRTGLFYKTVILFVQVFKLSVDEMGNLINLGARESCEFFHDPFMGRSDEGKVRKVLKVEPLHDGSGHMFKLSVQNKLKNIDENIFIPVTKAEFAVFNSLFNFIMPCLLGWNAFADSIKPEVNIANRRRREEDFEWNR*