Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099880 | KAF2313591.1 | 60.000 | 85 | 33 | 1 | 1 | 84 | 55 | 139 | 1.45e-23 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099880 | sp|Q9LVP9|VTI13_ARATH | 35.211 | 142 | 34 | 3 | 1 | 84 | 55 | 196 | 7.86e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099880 | A0A6A6MIJ0 | 60.000 | 85 | 33 | 1 | 1 | 84 | 55 | 139 | 6.94e-24 | 97.8 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa1099880 | 0.811139 | 8.129810e-51 | -8.615850e-47 |
| Msa0014570 | Msa1099880 | 0.813650 | 2.298514e-51 | -8.615850e-47 |
| Msa0026910 | Msa1099880 | 0.804955 | 1.685176e-49 | -8.615850e-47 |
| Msa0042550 | Msa1099880 | 0.847746 | 9.513840e-60 | -8.615850e-47 |
| Msa0043500 | Msa1099880 | 0.802218 | 6.226321e-49 | -8.615850e-47 |
| Msa0045790 | Msa1099880 | 0.800884 | 1.169082e-48 | -8.615850e-47 |
| Msa0046160 | Msa1099880 | 0.802611 | 5.168801e-49 | -8.615850e-47 |
| Msa0054820 | Msa1099880 | 0.816122 | 6.506440e-52 | -8.615850e-47 |
| Msa0056450 | Msa1099880 | 0.816130 | 6.480570e-52 | -8.615850e-47 |
| Msa0064110 | Msa1099880 | 0.807376 | 5.209832e-50 | -8.615850e-47 |
| Msa0065680 | Msa1099880 | -0.828205 | 1.023221e-54 | -8.615850e-47 |
| Msa0092410 | Msa1099880 | 0.816361 | 5.753820e-52 | -8.615850e-47 |
| Msa0100160 | Msa1099880 | 0.804499 | 2.097862e-49 | -8.615850e-47 |
| Msa0106620 | Msa1099880 | 0.801959 | 7.040169e-49 | -8.615850e-47 |
| Msa0613710 | Msa1099880 | 0.813554 | 2.414054e-51 | -8.615850e-47 |
| Msa0626990 | Msa1099880 | 0.800008 | 1.762902e-48 | -8.615850e-47 |
| Msa0636020 | Msa1099880 | 0.800455 | 1.429740e-48 | -8.615850e-47 |
| Msa0656000 | Msa1099880 | 0.802791 | 4.744954e-49 | -8.615850e-47 |
| Msa0661320 | Msa1099880 | 0.810506 | 1.114255e-50 | -8.615850e-47 |
| Msa0689760 | Msa1099880 | 0.809395 | 1.932994e-50 | -8.615850e-47 |
| Msa0695870 | Msa1099880 | 0.802761 | 4.811556e-49 | -8.615850e-47 |
| Msa0713510 | Msa1099880 | 0.816312 | 5.901041e-52 | -8.615850e-47 |
| Msa0715410 | Msa1099880 | 0.816709 | 4.807959e-52 | -8.615850e-47 |
| Msa0741070 | Msa1099880 | 0.815491 | 8.996746e-52 | -8.615850e-47 |
| Msa0749440 | Msa1099880 | 0.821120 | 4.780317e-53 | -8.615850e-47 |
| Msa0750240 | Msa1099880 | 0.802289 | 6.021998e-49 | -8.615850e-47 |
| Msa0751260 | Msa1099880 | 0.811762 | 5.951868e-51 | -8.615850e-47 |
| Msa0751850 | Msa1099880 | 0.803492 | 3.397003e-49 | -8.615850e-47 |
| Msa0757800 | Msa1099880 | 0.800851 | 1.186956e-48 | -8.615850e-47 |
| Msa0795070 | Msa1099880 | 0.816223 | 6.177941e-52 | -8.615850e-47 |
| Msa0797250 | Msa1099880 | 0.813458 | 2.533674e-51 | -8.615850e-47 |
| Msa0797770 | Msa1099880 | 0.806132 | 9.543306e-50 | -8.615850e-47 |
| Msa0800700 | Msa1099880 | 0.803806 | 2.924256e-49 | -8.615850e-47 |
| Msa0805430 | Msa1099880 | 0.803473 | 3.428910e-49 | -8.615850e-47 |
| Msa0817460 | Msa1099880 | 0.805352 | 1.391389e-49 | -8.615850e-47 |
| Msa0828240 | Msa1099880 | 0.804065 | 2.582821e-49 | -8.615850e-47 |
| Msa0831850 | Msa1099880 | 0.814434 | 1.543837e-51 | -8.615850e-47 |
| Msa0832090 | Msa1099880 | 0.818393 | 2.006536e-52 | -8.615850e-47 |
| Msa0835230 | Msa1099880 | 0.802851 | 4.611451e-49 | -8.615850e-47 |
| Msa0138020 | Msa1099880 | 0.803836 | 2.883032e-49 | -8.615850e-47 |
| Msa0139700 | Msa1099880 | 0.804417 | 2.181657e-49 | -8.615850e-47 |
| Msa0143850 | Msa1099880 | 0.807961 | 3.914095e-50 | -8.615850e-47 |
| Msa0149300 | Msa1099880 | 0.808759 | 2.645448e-50 | -8.615850e-47 |
| Msa0154440 | Msa1099880 | 0.802519 | 5.398671e-49 | -8.615850e-47 |
| Msa0154840 | Msa1099880 | -0.808965 | 2.389682e-50 | -8.615850e-47 |
| Msa0178510 | Msa1099880 | 0.854905 | 9.016950e-62 | -8.615850e-47 |
| Msa0186950 | Msa1099880 | 0.810426 | 1.159486e-50 | -8.615850e-47 |
| Msa0187030 | Msa1099880 | 0.816552 | 5.214233e-52 | -8.615850e-47 |
| Msa0187830 | Msa1099880 | 0.831542 | 1.574063e-55 | -8.615850e-47 |
| Msa0190530 | Msa1099880 | 0.815929 | 7.186751e-52 | -8.615850e-47 |
| Msa0191890 | Msa1099880 | 0.814973 | 1.172458e-51 | -8.615850e-47 |
| Msa0204840 | Msa1099880 | 0.814375 | 1.591215e-51 | -8.615850e-47 |
| Msa0218350 | Msa1099880 | 0.820528 | 6.541999e-53 | -8.615850e-47 |
| Msa0225220 | Msa1099880 | 0.819177 | 1.331515e-52 | -8.615850e-47 |
| Msa0227340 | Msa1099880 | 0.802843 | 4.628466e-49 | -8.615850e-47 |
| Msa0230370 | Msa1099880 | 0.818608 | 1.793243e-52 | -8.615850e-47 |
| Msa0389910 | Msa1099880 | 0.803638 | 3.168450e-49 | -8.615850e-47 |
| Msa0394140 | Msa1099880 | 0.800242 | 1.579680e-48 | -8.615850e-47 |
| Msa0432160 | Msa1099880 | 0.800513 | 1.391302e-48 | -8.615850e-47 |
| Msa0432670 | Msa1099880 | 0.817137 | 3.854637e-52 | -8.615850e-47 |
| Msa0455760 | Msa1099880 | 0.808891 | 2.477897e-50 | -8.615850e-47 |
| Msa0464100 | Msa1099880 | 0.803321 | 3.686943e-49 | -8.615850e-47 |
| Msa0464120 | Msa1099880 | 0.800267 | 1.561815e-48 | -8.615850e-47 |
| Msa0468320 | Msa1099880 | 0.814035 | 1.891005e-51 | -8.615850e-47 |
| Msa0468800 | Msa1099880 | 0.808698 | 2.725710e-50 | -8.615850e-47 |
| Msa0476680 | Msa1099880 | 0.806130 | 9.549279e-50 | -8.615850e-47 |
| Msa0999680 | Msa1099880 | 0.811061 | 8.452652e-51 | -8.615850e-47 |
| Msa1008750 | Msa1099880 | 0.838475 | 2.812347e-57 | -8.615850e-47 |
| Msa1022820 | Msa1099880 | 0.830160 | 3.434712e-55 | -8.615850e-47 |
| Msa1032800 | Msa1099880 | 0.803147 | 4.005445e-49 | -8.615850e-47 |
| Msa1034500 | Msa1099880 | 0.818421 | 1.977556e-52 | -8.615850e-47 |
| Msa1038080 | Msa1099880 | 0.810621 | 1.052360e-50 | -8.615850e-47 |
| Msa1039710 | Msa1099880 | -0.809535 | 1.803141e-50 | -8.615850e-47 |
| Msa1050740 | Msa1099880 | 0.804936 | 1.699963e-49 | -8.615850e-47 |
| Msa1063420 | Msa1099880 | 0.800648 | 1.305818e-48 | -8.615850e-47 |
| Msa1076960 | Msa1099880 | 0.815484 | 9.029398e-52 | -8.615850e-47 |
| Msa1079430 | Msa1099880 | 0.812218 | 4.736123e-51 | -8.615850e-47 |
| Msa1080960 | Msa1099880 | 0.829621 | 4.646608e-55 | -8.615850e-47 |
| Msa1096060 | Msa1099880 | 0.802190 | 6.310661e-49 | -8.615850e-47 |
| Msa1098250 | Msa1099880 | 0.807752 | 4.334514e-50 | -8.615850e-47 |
| Msa1098270 | Msa1099880 | 0.811661 | 6.262171e-51 | -8.615850e-47 |
| Msa1099880 | Msa1119090 | 0.807408 | 5.128389e-50 | -8.615850e-47 |
| Msa1099880 | Msa1119190 | 0.801053 | 1.079681e-48 | -8.615850e-47 |
| Msa1099880 | Msa1121490 | 0.808608 | 2.848876e-50 | -8.615850e-47 |
| Msa1099880 | Msa1122860 | 0.809404 | 1.924419e-50 | -8.615850e-47 |
| Msa1099880 | Msa1142670 | 0.810549 | 1.090894e-50 | -8.615850e-47 |
| Msa1099880 | Msa1188180 | 0.810200 | 1.297171e-50 | -8.615850e-47 |
| Msa1099880 | Msa1283740 | 0.823478 | 1.355428e-53 | -8.615850e-47 |
| Msa1099880 | Msa1286550 | 0.802516 | 5.405291e-49 | -8.615850e-47 |
| Msa1099880 | Msa1288450 | 0.808201 | 3.479485e-50 | -8.615850e-47 |
| Msa1099880 | Msa1297290 | 0.803966 | 2.708696e-49 | -8.615850e-47 |
| Msa1099880 | Msa1305350 | 0.804536 | 2.060492e-49 | -8.615850e-47 |
| Msa1099880 | Msa1307550 | 0.809586 | 1.759042e-50 | -8.615850e-47 |
| Msa1099880 | Msa1319820 | 0.802736 | 4.870669e-49 | -8.615850e-47 |
| Msa1099880 | Msa1330170 | 0.806179 | 9.329333e-50 | -8.615850e-47 |
| Msa1099880 | Msa1330180 | 0.808099 | 3.656996e-50 | -8.615850e-47 |
| Msa1099880 | Msa1338400 | 0.807234 | 5.583630e-50 | -8.615850e-47 |
| Msa1099880 | Msa1345810 | 0.829313 | 5.520064e-55 | -8.615850e-47 |
| Msa1099880 | Msa1349450 | 0.826041 | 3.372281e-54 | -8.615850e-47 |
| Msa1099880 | Msa1368430 | 0.804226 | 2.390990e-49 | -8.615850e-47 |
| Msa1099880 | Msa1369780 | 0.803410 | 3.532853e-49 | -8.615850e-47 |
| Msa1099880 | Msa1371940 | 0.818042 | 2.409972e-52 | -8.615850e-47 |
| Msa1099880 | Msa1372150 | 0.849504 | 3.098812e-60 | -8.615850e-47 |
| Msa1099880 | Msa1377570 | 0.800498 | 1.401451e-48 | -8.615850e-47 |
| Msa1099880 | Msa1380400 | 0.806791 | 6.927735e-50 | -8.615850e-47 |
| Msa1099880 | Msa1382790 | 0.809195 | 2.133701e-50 | -8.615850e-47 |
| Msa1099880 | Msa1385000 | 0.806590 | 7.640387e-50 | -8.615850e-47 |
| Msa1099880 | Msa1401270 | 0.814635 | 1.393309e-51 | -8.615850e-47 |
| Msa1099880 | Msa1408620 | -0.826377 | 2.804693e-54 | -8.615850e-47 |
| Msa1099880 | Msa1420250 | 0.808045 | 3.756439e-50 | -8.615850e-47 |
| Msa1099880 | Msa1424630 | 0.804481 | 2.116141e-49 | -8.615850e-47 |
| Msa1099880 | Msa1430550 | 0.812587 | 3.933533e-51 | -8.615850e-47 |
| Msa1099880 | Msa1440740 | 0.801659 | 8.110816e-49 | -8.615850e-47 |
| Msa1099880 | Msa1446780 | 0.807696 | 4.455393e-50 | -8.615850e-47 |
| Msa1099880 | Msa1458340 | 0.816500 | 5.354958e-52 | -8.615850e-47 |
| Msa0241140 | Msa1099880 | 0.805186 | 1.507682e-49 | -8.615850e-47 |
| Msa0254790 | Msa1099880 | 0.806406 | 8.354209e-50 | -8.615850e-47 |
| Msa0264830 | Msa1099880 | 0.804428 | 2.170583e-49 | -8.615850e-47 |
| Msa0269560 | Msa1099880 | 0.818937 | 1.509934e-52 | -8.615850e-47 |
| Msa0302870 | Msa1099880 | 0.807980 | 3.876660e-50 | -8.615850e-47 |
| Msa0307310 | Msa1099880 | 0.810261 | 1.258681e-50 | -8.615850e-47 |
| Msa0308460 | Msa1099880 | 0.833009 | 6.819954e-56 | -8.615850e-47 |
| Msa0311610 | Msa1099880 | 0.813926 | 1.998538e-51 | -8.615850e-47 |
| Msa0312530 | Msa1099880 | 0.817692 | 2.890287e-52 | -8.615850e-47 |
| Msa0322680 | Msa1099880 | 0.816537 | 5.256053e-52 | -8.615850e-47 |
| Msa0340340 | Msa1099880 | 0.806905 | 6.555129e-50 | -8.615850e-47 |
| Msa0342010 | Msa1099880 | 0.820742 | 5.841059e-53 | -8.615850e-47 |
| Msa0358890 | Msa1099880 | 0.810852 | 9.381369e-51 | -8.615850e-47 |
| Msa0506860 | Msa1099880 | 0.812754 | 3.616454e-51 | -8.615850e-47 |
| Msa0517090 | Msa1099880 | 0.811409 | 7.102862e-51 | -8.615850e-47 |
| Msa0518380 | Msa1099880 | 0.810546 | 1.092298e-50 | -8.615850e-47 |
| Msa0518440 | Msa1099880 | 0.815539 | 8.779204e-52 | -8.615850e-47 |
| Msa0521010 | Msa1099880 | 0.803610 | 3.211722e-49 | -8.615850e-47 |
| Msa0544660 | Msa1099880 | 0.803901 | 2.793529e-49 | -8.615850e-47 |
| Msa0559500 | Msa1099880 | 0.829518 | 4.922444e-55 | -8.615850e-47 |
| Msa0562570 | Msa1099880 | 0.802110 | 6.553682e-49 | -8.615850e-47 |
| Msa0576680 | Msa1099880 | 0.810780 | 9.723752e-51 | -8.615850e-47 |
| Msa0579660 | Msa1099880 | 0.828186 | 1.034124e-54 | -8.615850e-47 |
| Msa0868160 | Msa1099880 | 0.815248 | 1.018712e-51 | -8.615850e-47 |
| Msa0873860 | Msa1099880 | 0.821200 | 4.581561e-53 | -8.615850e-47 |
| Msa0892570 | Msa1099880 | 0.841430 | 4.774061e-58 | -8.615850e-47 |
| Msa0899970 | Msa1099880 | 0.803247 | 3.818104e-49 | -8.615850e-47 |
| Msa0900620 | Msa1099880 | 0.823620 | 1.255625e-53 | -8.615850e-47 |
| Msa0902830 | Msa1099880 | 0.829343 | 5.427205e-55 | -8.615850e-47 |
| Msa0906690 | Msa1099880 | 0.805503 | 1.293529e-49 | -8.615850e-47 |
| Msa0926370 | Msa1099880 | 0.800374 | 1.485406e-48 | -8.615850e-47 |
| Msa0936390 | Msa1099880 | 0.823259 | 1.525291e-53 | -8.615850e-47 |
| Msa0939110 | Msa1099880 | 0.815406 | 9.399200e-52 | -8.615850e-47 |
| Msa0965080 | Msa1099880 | 0.804073 | 2.573259e-49 | -8.615850e-47 |
| Msa0965290 | Msa1099880 | 0.811735 | 6.034023e-51 | -8.615850e-47 |
| Msa0975940 | Msa1099880 | 0.826025 | 3.401924e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099880 | MtrunA17_Chr7g0217961 | 100.000 | 39 | 0 | 0 | 1 | 39 | 55 | 93 | 7.93e-20 | 79.3 |
| Msa1099880 | MtrunA17_Chr6g0453631 | 89.744 | 39 | 4 | 0 | 1 | 39 | 55 | 93 | 2.35e-17 | 72.8 |
| Msa1099880 | MtrunA17_Chr3g0091631 | 38.028 | 142 | 30 | 4 | 1 | 84 | 118 | 259 | 9.01e-17 | 72.4 |
| Msa1099880 | MtrunA17_Chr5g0418041 | 37.324 | 142 | 31 | 4 | 1 | 84 | 56 | 197 | 1.58e-16 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099880 | AT3G29100.2 | 35.211 | 142 | 34 | 3 | 1 | 84 | 1 | 142 | 3.15e-16 | 69.3 |
| Msa1099880 | AT3G29100.4 | 35.211 | 142 | 34 | 3 | 1 | 84 | 1 | 142 | 3.15e-16 | 69.3 |
| Msa1099880 | AT3G29100.5 | 35.211 | 142 | 34 | 3 | 1 | 84 | 1 | 142 | 3.15e-16 | 69.3 |
| Msa1099880 | AT3G29100.1 | 35.211 | 142 | 34 | 3 | 1 | 84 | 29 | 170 | 4.38e-16 | 69.3 |
| Msa1099880 | AT3G29100.3 | 35.211 | 142 | 34 | 3 | 1 | 84 | 55 | 196 | 7.99e-16 | 69.3 |
| Msa1099880 | AT1G26670.1 | 37.324 | 142 | 31 | 4 | 1 | 84 | 56 | 197 | 9.06e-15 | 66.6 |
| Msa1099880 | AT5G39510.1 | 33.803 | 142 | 36 | 3 | 1 | 84 | 55 | 196 | 1.17e-14 | 66.2 |
Find 13 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTTGCAGCCAAACATTA+AGG | 0.247833 | 7_3:+29059982 | Msa1099880:CDS |
| TATTCCCTTATGCAGCTTCA+TGG | 0.316079 | 7_3:+29062311 | Msa1099880:CDS |
| TGTACTTCTTGCTAAGTTGC+GGG | 0.406118 | 7_3:+29060006 | Msa1099880:CDS |
| AGAAGTACACCCTTAATGTT+TGG | 0.429162 | 7_3:-29059992 | None:intergenic |
| AGTTTGCAGCCAAACATTAA+GGG | 0.439151 | 7_3:+29059983 | Msa1099880:CDS |
| ACATGTCTAAAAGGATGAAC+AGG | 0.448627 | 7_3:+29062375 | Msa1099880:CDS |
| CCACTCCATGAAGCTGCATA+AGG | 0.456016 | 7_3:-29062316 | None:intergenic |
| CACACTGTTCAATCTTCTGA+TGG | 0.472696 | 7_3:+29062284 | Msa1099880:CDS |
| CACTCCATGAAGCTGCATAA+GGG | 0.480700 | 7_3:-29062315 | None:intergenic |
| GAACTTAAGAAACTTGTATC+CGG | 0.521065 | 7_3:+29060061 | Msa1099880:CDS |
| GTGTACTTCTTGCTAAGTTG+CGG | 0.523629 | 7_3:+29060005 | Msa1099880:CDS |
| CCTTATGCAGCTTCATGGAG+TGG | 0.586115 | 7_3:+29062316 | Msa1099880:CDS |
| GATTCGGAAAATGGATCTTG+AGG | 0.594367 | 7_3:+29059955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+GGG | - | chr7_3:29060299-29060318 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7_3:29060300-29060319 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr7_3:29060299-29060318 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7_3:29060300-29060319 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr7_3:29060299-29060318 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7_3:29060300-29060319 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr7_3:29060299-29060318 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7_3:29060300-29060319 | None:intergenic | 0.0% |
| !! | AAAAGATCATATATATATAT+AGG | + | chr7_3:29060151-29060170 | Msa1099880:intron | 10.0% |
| !! | AAAGATCATATATATATATA+GGG | + | chr7_3:29060152-29060171 | Msa1099880:intron | 10.0% |
| !! | AAAAGAGAAAATTAAAAAAT+AGG | + | chr7_3:29061429-29061448 | Msa1099880:intron | 10.0% |
| !! | AAAAGATCATATATATATAT+AGG | + | chr7_3:29060151-29060170 | Msa1099880:intron | 10.0% |
| !! | AAAGATCATATATATATATA+GGG | + | chr7_3:29060152-29060171 | Msa1099880:intron | 10.0% |
| !! | AAAAGAGAAAATTAAAAAAT+AGG | + | chr7_3:29061429-29061448 | Msa1099880:intron | 10.0% |
| !!! | TTTGTTGTACAAAATATTTT+TGG | - | chr7_3:29061135-29061154 | None:intergenic | 15.0% |
| !!! | AATTGTTTAAGTTTTATCTT+CGG | + | chr7_3:29062117-29062136 | Msa1099880:intron | 15.0% |
| !!! | TTTGTTGTACAAAATATTTT+TGG | - | chr7_3:29061135-29061154 | None:intergenic | 15.0% |
| !!! | AATTGTTTAAGTTTTATCTT+CGG | + | chr7_3:29062117-29062136 | Msa1099880:intron | 15.0% |
| !!! | TGCATTTGATTTTAAGTTAA+TGG | - | chr7_3:29060668-29060687 | None:intergenic | 20.0% |
| !! | AGATGTTATCAAGATATATT+TGG | - | chr7_3:29061035-29061054 | None:intergenic | 20.0% |
| !!! | TATTTTGTACAACAAATCAA+AGG | + | chr7_3:29061139-29061158 | Msa1099880:intron | 20.0% |
| !!! | CATGTTTTCAATTTCAATTT+CGG | - | chr7_3:29061256-29061275 | None:intergenic | 20.0% |
| !! | TTGGTTCAAAAAATAATACA+AGG | + | chr7_3:29061480-29061499 | Msa1099880:intron | 20.0% |
| !! | TGGTTCAAAAAATAATACAA+GGG | + | chr7_3:29061481-29061500 | Msa1099880:intron | 20.0% |
| !! | CTTTGGATTAAATAAATGAA+CGG | - | chr7_3:29061655-29061674 | None:intergenic | 20.0% |
| !! | TGACTTCAAATTAATTGAAT+TGG | - | chr7_3:29061850-29061869 | None:intergenic | 20.0% |
| !!! | TGCATTTGATTTTAAGTTAA+TGG | - | chr7_3:29060668-29060687 | None:intergenic | 20.0% |
| !! | AGATGTTATCAAGATATATT+TGG | - | chr7_3:29061035-29061054 | None:intergenic | 20.0% |
| !!! | TATTTTGTACAACAAATCAA+AGG | + | chr7_3:29061139-29061158 | Msa1099880:intron | 20.0% |
| !!! | CATGTTTTCAATTTCAATTT+CGG | - | chr7_3:29061256-29061275 | None:intergenic | 20.0% |
| !! | TTGGTTCAAAAAATAATACA+AGG | + | chr7_3:29061480-29061499 | Msa1099880:intron | 20.0% |
| !! | TGGTTCAAAAAATAATACAA+GGG | + | chr7_3:29061481-29061500 | Msa1099880:intron | 20.0% |
| !! | CTTTGGATTAAATAAATGAA+CGG | - | chr7_3:29061655-29061674 | None:intergenic | 20.0% |
| !! | TGACTTCAAATTAATTGAAT+TGG | - | chr7_3:29061850-29061869 | None:intergenic | 20.0% |
| ! | GTCTAAAAAACAAAAACAAG+GGG | - | chr7_3:29060467-29060486 | None:intergenic | 25.0% |
| ! | GGTCTAAAAAACAAAAACAA+GGG | - | chr7_3:29060468-29060487 | None:intergenic | 25.0% |
| ! | TGGTCTAAAAAACAAAAACA+AGG | - | chr7_3:29060469-29060488 | None:intergenic | 25.0% |
| ! | TTTAGACCAATTAAAACTGA+AGG | + | chr7_3:29060480-29060499 | Msa1099880:intron | 25.0% |
| !!! | TTATGTCCTTCAGTTTTAAT+TGG | - | chr7_3:29060489-29060508 | None:intergenic | 25.0% |
| !!! | GTTGAATTTTGATTCAGTTT+GGG | - | chr7_3:29061113-29061132 | None:intergenic | 25.0% |
| ! | TCAATTTCAATTTCGGATTT+CGG | - | chr7_3:29061249-29061268 | None:intergenic | 25.0% |
| !!! | TAACTGTGTTTTTGAGATTT+AGG | + | chr7_3:29061283-29061302 | Msa1099880:intron | 25.0% |
| ! | TTGAACCAATTAAAACTGAA+GGG | - | chr7_3:29061469-29061488 | None:intergenic | 25.0% |
| ! | TTTGAACCAATTAAAACTGA+AGG | - | chr7_3:29061470-29061489 | None:intergenic | 25.0% |
| ! | GGTTCAAAAAATAATACAAG+GGG | + | chr7_3:29061482-29061501 | Msa1099880:intron | 25.0% |
| ! | CGTTCATTTATTTAATCCAA+AGG | + | chr7_3:29061653-29061672 | Msa1099880:intron | 25.0% |
| !! | TTTCTCTGTACTCTAAAAAA+TGG | + | chr7_3:29061821-29061840 | Msa1099880:intron | 25.0% |
| ! | CTTCAAATTAATTGAATTGG+TGG | - | chr7_3:29061847-29061866 | None:intergenic | 25.0% |
| !!! | TACATTGCTTTTCTTCTTTA+CGG | + | chr7_3:29062154-29062173 | Msa1099880:intron | 25.0% |
| !! | ATGAAAGTATAACTCTGTAA+TGG | + | chr7_3:29062241-29062260 | Msa1099880:intron | 25.0% |
| !! | TTTTGTCTAACATGTCTAAA+AGG | + | chr7_3:29062366-29062385 | Msa1099880:CDS | 25.0% |
| ! | GTCTAAAAAACAAAAACAAG+GGG | - | chr7_3:29060467-29060486 | None:intergenic | 25.0% |
| ! | GGTCTAAAAAACAAAAACAA+GGG | - | chr7_3:29060468-29060487 | None:intergenic | 25.0% |
| ! | TGGTCTAAAAAACAAAAACA+AGG | - | chr7_3:29060469-29060488 | None:intergenic | 25.0% |
| ! | TTTAGACCAATTAAAACTGA+AGG | + | chr7_3:29060480-29060499 | Msa1099880:intron | 25.0% |
| !!! | TTATGTCCTTCAGTTTTAAT+TGG | - | chr7_3:29060489-29060508 | None:intergenic | 25.0% |
| !!! | GTTGAATTTTGATTCAGTTT+GGG | - | chr7_3:29061113-29061132 | None:intergenic | 25.0% |
| ! | TCAATTTCAATTTCGGATTT+CGG | - | chr7_3:29061249-29061268 | None:intergenic | 25.0% |
| !!! | TAACTGTGTTTTTGAGATTT+AGG | + | chr7_3:29061283-29061302 | Msa1099880:intron | 25.0% |
| ! | TTGAACCAATTAAAACTGAA+GGG | - | chr7_3:29061469-29061488 | None:intergenic | 25.0% |
| ! | TTTGAACCAATTAAAACTGA+AGG | - | chr7_3:29061470-29061489 | None:intergenic | 25.0% |
| ! | GGTTCAAAAAATAATACAAG+GGG | + | chr7_3:29061482-29061501 | Msa1099880:intron | 25.0% |
| ! | CGTTCATTTATTTAATCCAA+AGG | + | chr7_3:29061653-29061672 | Msa1099880:intron | 25.0% |
| !! | TTTCTCTGTACTCTAAAAAA+TGG | + | chr7_3:29061821-29061840 | Msa1099880:intron | 25.0% |
| ! | CTTCAAATTAATTGAATTGG+TGG | - | chr7_3:29061847-29061866 | None:intergenic | 25.0% |
| !!! | TACATTGCTTTTCTTCTTTA+CGG | + | chr7_3:29062154-29062173 | Msa1099880:intron | 25.0% |
| !! | ATGAAAGTATAACTCTGTAA+TGG | + | chr7_3:29062241-29062260 | Msa1099880:intron | 25.0% |
| !! | TTTTGTCTAACATGTCTAAA+AGG | + | chr7_3:29062366-29062385 | Msa1099880:CDS | 25.0% |
| GAACTTAAGAAACTTGTATC+CGG | + | chr7_3:29060061-29060080 | Msa1099880:CDS | 30.0% | |
| ACTTGAAACTTTAGCAATCA+TGG | - | chr7_3:29060125-29060144 | None:intergenic | 30.0% | |
| ! | TTTTAACAAGTCACACCTTA+AGG | + | chr7_3:29060205-29060224 | Msa1099880:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | - | chr7_3:29060223-29060242 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr7_3:29060258-29060277 | Msa1099880:intron | 30.0% | |
| ! | ATAGAAGACACCTTTTATGA+AGG | - | chr7_3:29060271-29060290 | None:intergenic | 30.0% |
| GGACACTAGTTATTTAAATG+TGG | - | chr7_3:29060825-29060844 | None:intergenic | 30.0% | |
| ATCAATGGGATTCTAATTGT+AGG | + | chr7_3:29060880-29060899 | Msa1099880:intron | 30.0% | |
| !!! | GGTTGAATTTTGATTCAGTT+TGG | - | chr7_3:29061114-29061133 | None:intergenic | 30.0% |
| TCCAAAATTCAACCAGAATT+AGG | + | chr7_3:29061184-29061203 | Msa1099880:intron | 30.0% | |
| CCAAAATTCAACCAGAATTA+GGG | + | chr7_3:29061185-29061204 | Msa1099880:intron | 30.0% | |
| ! | TTAGGATTGATTCAAGATGA+AGG | + | chr7_3:29061301-29061320 | Msa1099880:intron | 30.0% |
| ATAAATGAACGGTTGAGATT+TGG | - | chr7_3:29061644-29061663 | None:intergenic | 30.0% | |
| ACAATTGGATATGACTTAGA+AGG | - | chr7_3:29061799-29061818 | None:intergenic | 30.0% | |
| ! | GCTGAGAATGTAAATTTTGA+AGG | - | chr7_3:29061891-29061910 | None:intergenic | 30.0% |
| ATTTCTTGGACTTATACCAT+AGG | + | chr7_3:29062074-29062093 | Msa1099880:intron | 30.0% | |
| GAACTTAAGAAACTTGTATC+CGG | + | chr7_3:29060061-29060080 | Msa1099880:CDS | 30.0% | |
| ACTTGAAACTTTAGCAATCA+TGG | - | chr7_3:29060125-29060144 | None:intergenic | 30.0% | |
| ! | TTTTAACAAGTCACACCTTA+AGG | + | chr7_3:29060205-29060224 | Msa1099880:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | - | chr7_3:29060223-29060242 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr7_3:29060258-29060277 | Msa1099880:intron | 30.0% | |
| ! | ATAGAAGACACCTTTTATGA+AGG | - | chr7_3:29060271-29060290 | None:intergenic | 30.0% |
| GGACACTAGTTATTTAAATG+TGG | - | chr7_3:29060825-29060844 | None:intergenic | 30.0% | |
| ATCAATGGGATTCTAATTGT+AGG | + | chr7_3:29060880-29060899 | Msa1099880:intron | 30.0% | |
| !!! | GGTTGAATTTTGATTCAGTT+TGG | - | chr7_3:29061114-29061133 | None:intergenic | 30.0% |
| TCCAAAATTCAACCAGAATT+AGG | + | chr7_3:29061184-29061203 | Msa1099880:intron | 30.0% | |
| CCAAAATTCAACCAGAATTA+GGG | + | chr7_3:29061185-29061204 | Msa1099880:intron | 30.0% | |
| ! | TTAGGATTGATTCAAGATGA+AGG | + | chr7_3:29061301-29061320 | Msa1099880:intron | 30.0% |
| ATAAATGAACGGTTGAGATT+TGG | - | chr7_3:29061644-29061663 | None:intergenic | 30.0% | |
| ACAATTGGATATGACTTAGA+AGG | - | chr7_3:29061799-29061818 | None:intergenic | 30.0% | |
| ! | GCTGAGAATGTAAATTTTGA+AGG | - | chr7_3:29061891-29061910 | None:intergenic | 30.0% |
| ATTTCTTGGACTTATACCAT+AGG | + | chr7_3:29062074-29062093 | Msa1099880:intron | 30.0% | |
| AAGTTTGCAGCCAAACATTA+AGG | + | chr7_3:29059982-29060001 | Msa1099880:CDS | 35.0% | |
| AGTTTGCAGCCAAACATTAA+GGG | + | chr7_3:29059983-29060002 | Msa1099880:CDS | 35.0% | |
| ! | AGAAGTACACCCTTAATGTT+TGG | - | chr7_3:29059995-29060014 | None:intergenic | 35.0% |
| TGGTTTCACATAACATATCC+CGG | - | chr7_3:29060105-29060124 | None:intergenic | 35.0% | |
| !! | TTTTGTTATAAGCCACCCTT+TGG | + | chr7_3:29060175-29060194 | Msa1099880:intron | 35.0% |
| TGTTAAAAGACACCACCAAA+GGG | - | chr7_3:29060193-29060212 | None:intergenic | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | - | chr7_3:29060194-29060213 | None:intergenic | 35.0% | |
| AGACCTTCACAAAAATGAGT+GGG | - | chr7_3:29060407-29060426 | None:intergenic | 35.0% | |
| TAGACCTTCACAAAAATGAG+TGG | - | chr7_3:29060408-29060427 | None:intergenic | 35.0% | |
| AAGAAAGAGAAGAGAATGAG+GGG | - | chr7_3:29060573-29060592 | None:intergenic | 35.0% | |
| GAAGAAAGAGAAGAGAATGA+GGG | - | chr7_3:29060574-29060593 | None:intergenic | 35.0% | |
| AAAAACTAGCAGAGAAGAGA+AGG | - | chr7_3:29060596-29060615 | None:intergenic | 35.0% | |
| !! | AAAATGACTAAAAGTGCCTC+TGG | + | chr7_3:29060761-29060780 | Msa1099880:intron | 35.0% |
| !! | TAGTGTCCACATTTTGAAAG+AGG | + | chr7_3:29060837-29060856 | Msa1099880:intron | 35.0% |
| CTAAAGCCTCTTTCAAAATG+TGG | - | chr7_3:29060846-29060865 | None:intergenic | 35.0% | |
| ! | CATTGATTGCAGACATCAAT+GGG | + | chr7_3:29060866-29060885 | Msa1099880:intron | 35.0% |
| !! | TCTGGTTGAATTTTGGAAAC+AGG | - | chr7_3:29061181-29061200 | None:intergenic | 35.0% |
| !! | CCCTAATTCTGGTTGAATTT+TGG | - | chr7_3:29061188-29061207 | None:intergenic | 35.0% |
| ! | TTTTTCTTTCTTCCATCCCT+TGG | - | chr7_3:29061396-29061415 | None:intergenic | 35.0% |
| !! | TTGTGCCCTTCAGTTTTAAT+TGG | + | chr7_3:29061461-29061480 | Msa1099880:intron | 35.0% |
| TAGACCTTCATGAAAATGAG+TGG | + | chr7_3:29061541-29061560 | Msa1099880:intron | 35.0% | |
| AGACCTTCATGAAAATGAGT+GGG | + | chr7_3:29061542-29061561 | Msa1099880:intron | 35.0% | |
| !! | TAATTTGGACTGGCAATTCA+AGG | - | chr7_3:29061679-29061698 | None:intergenic | 35.0% |
| !! | TCACGCAATTTAATTTGGAC+TGG | - | chr7_3:29061689-29061708 | None:intergenic | 35.0% |
| AAGGCTCACGCAATTTAATT+TGG | - | chr7_3:29061694-29061713 | None:intergenic | 35.0% | |
| TTTATTGTGTTAAGAGCAGC+GGG | - | chr7_3:29061741-29061760 | None:intergenic | 35.0% | |
| GTTTATTGTGTTAAGAGCAG+CGG | - | chr7_3:29061742-29061761 | None:intergenic | 35.0% | |
| CAATTGAGATTTGATAGGTG+AGG | - | chr7_3:29061768-29061787 | None:intergenic | 35.0% | |
| GAGTACAGAGAAATCACAAT+TGG | - | chr7_3:29061814-29061833 | None:intergenic | 35.0% | |
| ACGAGCAAATCATAAGTGAA+AGG | - | chr7_3:29061962-29061981 | None:intergenic | 35.0% | |
| ! | ACGGTAGATTTTCTGCATAT+TGG | + | chr7_3:29062173-29062192 | Msa1099880:intron | 35.0% |
| GTATAACTCTGTAATGGTAG+TGG | + | chr7_3:29062247-29062266 | Msa1099880:intron | 35.0% | |
| ACATGTCTAAAAGGATGAAC+AGG | + | chr7_3:29062375-29062394 | Msa1099880:CDS | 35.0% | |
| AAGTTTGCAGCCAAACATTA+AGG | + | chr7_3:29059982-29060001 | Msa1099880:CDS | 35.0% | |
| AGTTTGCAGCCAAACATTAA+GGG | + | chr7_3:29059983-29060002 | Msa1099880:CDS | 35.0% | |
| ! | AGAAGTACACCCTTAATGTT+TGG | - | chr7_3:29059995-29060014 | None:intergenic | 35.0% |
| TGGTTTCACATAACATATCC+CGG | - | chr7_3:29060105-29060124 | None:intergenic | 35.0% | |
| !! | TTTTGTTATAAGCCACCCTT+TGG | + | chr7_3:29060175-29060194 | Msa1099880:intron | 35.0% |
| TGTTAAAAGACACCACCAAA+GGG | - | chr7_3:29060193-29060212 | None:intergenic | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | - | chr7_3:29060194-29060213 | None:intergenic | 35.0% | |
| AGACCTTCACAAAAATGAGT+GGG | - | chr7_3:29060407-29060426 | None:intergenic | 35.0% | |
| TAGACCTTCACAAAAATGAG+TGG | - | chr7_3:29060408-29060427 | None:intergenic | 35.0% | |
| AAGAAAGAGAAGAGAATGAG+GGG | - | chr7_3:29060573-29060592 | None:intergenic | 35.0% | |
| GAAGAAAGAGAAGAGAATGA+GGG | - | chr7_3:29060574-29060593 | None:intergenic | 35.0% | |
| AAAAACTAGCAGAGAAGAGA+AGG | - | chr7_3:29060596-29060615 | None:intergenic | 35.0% | |
| !! | AAAATGACTAAAAGTGCCTC+TGG | + | chr7_3:29060761-29060780 | Msa1099880:intron | 35.0% |
| !! | TAGTGTCCACATTTTGAAAG+AGG | + | chr7_3:29060837-29060856 | Msa1099880:intron | 35.0% |
| CTAAAGCCTCTTTCAAAATG+TGG | - | chr7_3:29060846-29060865 | None:intergenic | 35.0% | |
| ! | CATTGATTGCAGACATCAAT+GGG | + | chr7_3:29060866-29060885 | Msa1099880:intron | 35.0% |
| !! | TCTGGTTGAATTTTGGAAAC+AGG | - | chr7_3:29061181-29061200 | None:intergenic | 35.0% |
| !! | CCCTAATTCTGGTTGAATTT+TGG | - | chr7_3:29061188-29061207 | None:intergenic | 35.0% |
| ! | TTTTTCTTTCTTCCATCCCT+TGG | - | chr7_3:29061396-29061415 | None:intergenic | 35.0% |
| !! | TTGTGCCCTTCAGTTTTAAT+TGG | + | chr7_3:29061461-29061480 | Msa1099880:intron | 35.0% |
| TAGACCTTCATGAAAATGAG+TGG | + | chr7_3:29061541-29061560 | Msa1099880:intron | 35.0% | |
| AGACCTTCATGAAAATGAGT+GGG | + | chr7_3:29061542-29061561 | Msa1099880:intron | 35.0% | |
| !! | TAATTTGGACTGGCAATTCA+AGG | - | chr7_3:29061679-29061698 | None:intergenic | 35.0% |
| !! | TCACGCAATTTAATTTGGAC+TGG | - | chr7_3:29061689-29061708 | None:intergenic | 35.0% |
| AAGGCTCACGCAATTTAATT+TGG | - | chr7_3:29061694-29061713 | None:intergenic | 35.0% | |
| TTTATTGTGTTAAGAGCAGC+GGG | - | chr7_3:29061741-29061760 | None:intergenic | 35.0% | |
| GTTTATTGTGTTAAGAGCAG+CGG | - | chr7_3:29061742-29061761 | None:intergenic | 35.0% | |
| CAATTGAGATTTGATAGGTG+AGG | - | chr7_3:29061768-29061787 | None:intergenic | 35.0% | |
| GAGTACAGAGAAATCACAAT+TGG | - | chr7_3:29061814-29061833 | None:intergenic | 35.0% | |
| ACGAGCAAATCATAAGTGAA+AGG | - | chr7_3:29061962-29061981 | None:intergenic | 35.0% | |
| ! | ACGGTAGATTTTCTGCATAT+TGG | + | chr7_3:29062173-29062192 | Msa1099880:intron | 35.0% |
| GTATAACTCTGTAATGGTAG+TGG | + | chr7_3:29062247-29062266 | Msa1099880:intron | 35.0% | |
| ACATGTCTAAAAGGATGAAC+AGG | + | chr7_3:29062375-29062394 | Msa1099880:CDS | 35.0% | |
| GTGTACTTCTTGCTAAGTTG+CGG | + | chr7_3:29060005-29060024 | Msa1099880:CDS | 40.0% | |
| TGTACTTCTTGCTAAGTTGC+GGG | + | chr7_3:29060006-29060025 | Msa1099880:CDS | 40.0% | |
| GGTTTCACATAACATATCCC+GGG | - | chr7_3:29060104-29060123 | None:intergenic | 40.0% | |
| GGGTCTTCACAAAAATGAGT+GGG | - | chr7_3:29060387-29060406 | None:intergenic | 40.0% | |
| TGGGTCTTCACAAAAATGAG+TGG | - | chr7_3:29060388-29060407 | None:intergenic | 40.0% | |
| !! | AGACCCACTCATTTTTGTGA+AGG | + | chr7_3:29060381-29060400 | Msa1099880:intron | 40.0% |
| AGAAAGAGAAGAGAATGAGG+GGG | - | chr7_3:29060572-29060591 | None:intergenic | 40.0% | |
| GGAAGAAAGAGAAGAGAATG+AGG | - | chr7_3:29060575-29060594 | None:intergenic | 40.0% | |
| ATTCTGCAAAATGCAACCAG+AGG | - | chr7_3:29060780-29060799 | None:intergenic | 40.0% | |
| GCAGAATGTTATCTTGCTCA+TGG | + | chr7_3:29060793-29060812 | Msa1099880:intron | 40.0% | |
| !! | GCATTGATTGCAGACATCAA+TGG | + | chr7_3:29060865-29060884 | Msa1099880:intron | 40.0% |
| ATAGTGTATCATGCGTAGGT+TGG | - | chr7_3:29061012-29061031 | None:intergenic | 40.0% | |
| TTGGATAGTGTATCATGCGT+AGG | - | chr7_3:29061016-29061035 | None:intergenic | 40.0% | |
| AACCAGAATTAGGGTTTCAG+CGG | + | chr7_3:29061194-29061213 | Msa1099880:intron | 40.0% | |
| ! | ATGAAGGATAGTTGATACGC+AGG | + | chr7_3:29061317-29061336 | Msa1099880:intron | 40.0% |
| ! | TGAAGGATAGTTGATACGCA+GGG | + | chr7_3:29061318-29061337 | Msa1099880:intron | 40.0% |
| AACAACTACTCAGAAGACGA+AGG | + | chr7_3:29061365-29061384 | Msa1099880:intron | 40.0% | |
| ! | GGCTTTGTGTCTAAGTGAAA+AGG | + | chr7_3:29061503-29061522 | Msa1099880:intron | 40.0% |
| ! | GTGTCTAAGTGAAAAGGTGT+TGG | + | chr7_3:29061509-29061528 | Msa1099880:intron | 40.0% |
| ! | AGACCCACTCATTTTCATGA+AGG | - | chr7_3:29061548-29061567 | None:intergenic | 40.0% |
| AGTATTATGTTGTGAGGAGG+AGG | - | chr7_3:29061718-29061737 | None:intergenic | 40.0% | |
| TGAGATTTGATAGGTGAGGA+GGG | - | chr7_3:29061764-29061783 | None:intergenic | 40.0% | |
| TTGAGATTTGATAGGTGAGG+AGG | - | chr7_3:29061765-29061784 | None:intergenic | 40.0% | |
| AGGGGCAATTGAGATTTGAT+AGG | - | chr7_3:29061773-29061792 | None:intergenic | 40.0% | |
| ! | ATATGACTTAGAAGGTGCAG+GGG | - | chr7_3:29061791-29061810 | None:intergenic | 40.0% |
| ! | GATATGACTTAGAAGGTGCA+GGG | - | chr7_3:29061792-29061811 | None:intergenic | 40.0% |
| GCATTTCACTCAAAGTCCTA+TGG | - | chr7_3:29062093-29062112 | None:intergenic | 40.0% | |
| CACACTGTTCAATCTTCTGA+TGG | + | chr7_3:29062284-29062303 | Msa1099880:CDS | 40.0% | |
| TATTCCCTTATGCAGCTTCA+TGG | + | chr7_3:29062311-29062330 | Msa1099880:CDS | 40.0% | |
| GTGTACTTCTTGCTAAGTTG+CGG | + | chr7_3:29060005-29060024 | Msa1099880:CDS | 40.0% | |
| TGTACTTCTTGCTAAGTTGC+GGG | + | chr7_3:29060006-29060025 | Msa1099880:CDS | 40.0% | |
| GGTTTCACATAACATATCCC+GGG | - | chr7_3:29060104-29060123 | None:intergenic | 40.0% | |
| GGGTCTTCACAAAAATGAGT+GGG | - | chr7_3:29060387-29060406 | None:intergenic | 40.0% | |
| TGGGTCTTCACAAAAATGAG+TGG | - | chr7_3:29060388-29060407 | None:intergenic | 40.0% | |
| !! | AGACCCACTCATTTTTGTGA+AGG | + | chr7_3:29060381-29060400 | Msa1099880:intron | 40.0% |
| AGAAAGAGAAGAGAATGAGG+GGG | - | chr7_3:29060572-29060591 | None:intergenic | 40.0% | |
| GGAAGAAAGAGAAGAGAATG+AGG | - | chr7_3:29060575-29060594 | None:intergenic | 40.0% | |
| ATTCTGCAAAATGCAACCAG+AGG | - | chr7_3:29060780-29060799 | None:intergenic | 40.0% | |
| GCAGAATGTTATCTTGCTCA+TGG | + | chr7_3:29060793-29060812 | Msa1099880:intron | 40.0% | |
| !! | GCATTGATTGCAGACATCAA+TGG | + | chr7_3:29060865-29060884 | Msa1099880:intron | 40.0% |
| ATAGTGTATCATGCGTAGGT+TGG | - | chr7_3:29061012-29061031 | None:intergenic | 40.0% | |
| TTGGATAGTGTATCATGCGT+AGG | - | chr7_3:29061016-29061035 | None:intergenic | 40.0% | |
| AACCAGAATTAGGGTTTCAG+CGG | + | chr7_3:29061194-29061213 | Msa1099880:intron | 40.0% | |
| ! | ATGAAGGATAGTTGATACGC+AGG | + | chr7_3:29061317-29061336 | Msa1099880:intron | 40.0% |
| ! | TGAAGGATAGTTGATACGCA+GGG | + | chr7_3:29061318-29061337 | Msa1099880:intron | 40.0% |
| AACAACTACTCAGAAGACGA+AGG | + | chr7_3:29061365-29061384 | Msa1099880:intron | 40.0% | |
| ! | GGCTTTGTGTCTAAGTGAAA+AGG | + | chr7_3:29061503-29061522 | Msa1099880:intron | 40.0% |
| ! | GTGTCTAAGTGAAAAGGTGT+TGG | + | chr7_3:29061509-29061528 | Msa1099880:intron | 40.0% |
| ! | AGACCCACTCATTTTCATGA+AGG | - | chr7_3:29061548-29061567 | None:intergenic | 40.0% |
| AGTATTATGTTGTGAGGAGG+AGG | - | chr7_3:29061718-29061737 | None:intergenic | 40.0% | |
| TGAGATTTGATAGGTGAGGA+GGG | - | chr7_3:29061764-29061783 | None:intergenic | 40.0% | |
| TTGAGATTTGATAGGTGAGG+AGG | - | chr7_3:29061765-29061784 | None:intergenic | 40.0% | |
| AGGGGCAATTGAGATTTGAT+AGG | - | chr7_3:29061773-29061792 | None:intergenic | 40.0% | |
| ! | ATATGACTTAGAAGGTGCAG+GGG | - | chr7_3:29061791-29061810 | None:intergenic | 40.0% |
| ! | GATATGACTTAGAAGGTGCA+GGG | - | chr7_3:29061792-29061811 | None:intergenic | 40.0% |
| GCATTTCACTCAAAGTCCTA+TGG | - | chr7_3:29062093-29062112 | None:intergenic | 40.0% | |
| CACACTGTTCAATCTTCTGA+TGG | + | chr7_3:29062284-29062303 | Msa1099880:CDS | 40.0% | |
| TATTCCCTTATGCAGCTTCA+TGG | + | chr7_3:29062311-29062330 | Msa1099880:CDS | 40.0% | |
| TGTTATAAGCCACCCTTTGG+TGG | + | chr7_3:29060178-29060197 | Msa1099880:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr7_3:29060190-29060209 | None:intergenic | 45.0% | |
| ! | GCAACCAACACCTTTTCACT+TGG | + | chr7_3:29060433-29060452 | Msa1099880:intron | 45.0% |
| ! | GTGTCCAAGTGAAAAGGTGT+TGG | - | chr7_3:29060440-29060459 | None:intergenic | 45.0% |
| ! | GGCTTTGTGTCCAAGTGAAA+AGG | - | chr7_3:29060446-29060465 | None:intergenic | 45.0% |
| GAAAGAGAAGAGAATGAGGG+GGG | - | chr7_3:29060571-29060590 | None:intergenic | 45.0% | |
| AAGGTGATGTCTTGCAACAG+CGG | - | chr7_3:29060624-29060643 | None:intergenic | 45.0% | |
| GCAAGCACAATGTTGAAGGA+AGG | - | chr7_3:29060643-29060662 | None:intergenic | 45.0% | |
| GGAAGCAAGCACAATGTTGA+AGG | - | chr7_3:29060647-29060666 | None:intergenic | 45.0% | |
| !! | TCATGCGTAGGTTGGTTTCA+TGG | - | chr7_3:29061004-29061023 | None:intergenic | 45.0% |
| ACCAGAATTAGGGTTTCAGC+GGG | + | chr7_3:29061195-29061214 | Msa1099880:intron | 45.0% | |
| ATTAGGGTTTCAGCGGGAAT+AGG | + | chr7_3:29061201-29061220 | Msa1099880:intron | 45.0% | |
| AGAAGACGAAGGAGATACCA+AGG | + | chr7_3:29061376-29061395 | Msa1099880:intron | 45.0% | |
| GAAGACGAAGGAGATACCAA+GGG | + | chr7_3:29061377-29061396 | Msa1099880:intron | 45.0% | |
| !! | CGGTTGAGATTTGGTGTCAA+CGG | - | chr7_3:29061635-29061654 | None:intergenic | 45.0% |
| TATGTTGTGAGGAGGAGGAA+AGG | - | chr7_3:29061713-29061732 | None:intergenic | 45.0% | |
| !! | GGGAGTATTATGTTGTGAGG+AGG | - | chr7_3:29061721-29061740 | None:intergenic | 45.0% |
| !! | AGCGGGAGTATTATGTTGTG+AGG | - | chr7_3:29061724-29061743 | None:intergenic | 45.0% |
| ! | GGATATGACTTAGAAGGTGC+AGG | - | chr7_3:29061793-29061812 | None:intergenic | 45.0% |
| CTGCATCATGCAGCATTTCT+TGG | + | chr7_3:29062060-29062079 | Msa1099880:intron | 45.0% | |
| CACTCCATGAAGCTGCATAA+GGG | - | chr7_3:29062318-29062337 | None:intergenic | 45.0% | |
| TGTTATAAGCCACCCTTTGG+TGG | + | chr7_3:29060178-29060197 | Msa1099880:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr7_3:29060190-29060209 | None:intergenic | 45.0% | |
| ! | GCAACCAACACCTTTTCACT+TGG | + | chr7_3:29060433-29060452 | Msa1099880:intron | 45.0% |
| ! | GTGTCCAAGTGAAAAGGTGT+TGG | - | chr7_3:29060440-29060459 | None:intergenic | 45.0% |
| ! | GGCTTTGTGTCCAAGTGAAA+AGG | - | chr7_3:29060446-29060465 | None:intergenic | 45.0% |
| GAAAGAGAAGAGAATGAGGG+GGG | - | chr7_3:29060571-29060590 | None:intergenic | 45.0% | |
| AAGGTGATGTCTTGCAACAG+CGG | - | chr7_3:29060624-29060643 | None:intergenic | 45.0% | |
| GCAAGCACAATGTTGAAGGA+AGG | - | chr7_3:29060643-29060662 | None:intergenic | 45.0% | |
| GGAAGCAAGCACAATGTTGA+AGG | - | chr7_3:29060647-29060666 | None:intergenic | 45.0% | |
| !! | TCATGCGTAGGTTGGTTTCA+TGG | - | chr7_3:29061004-29061023 | None:intergenic | 45.0% |
| ACCAGAATTAGGGTTTCAGC+GGG | + | chr7_3:29061195-29061214 | Msa1099880:intron | 45.0% | |
| ATTAGGGTTTCAGCGGGAAT+AGG | + | chr7_3:29061201-29061220 | Msa1099880:intron | 45.0% | |
| AGAAGACGAAGGAGATACCA+AGG | + | chr7_3:29061376-29061395 | Msa1099880:intron | 45.0% | |
| GAAGACGAAGGAGATACCAA+GGG | + | chr7_3:29061377-29061396 | Msa1099880:intron | 45.0% | |
| !! | CGGTTGAGATTTGGTGTCAA+CGG | - | chr7_3:29061635-29061654 | None:intergenic | 45.0% |
| TATGTTGTGAGGAGGAGGAA+AGG | - | chr7_3:29061713-29061732 | None:intergenic | 45.0% | |
| !! | GGGAGTATTATGTTGTGAGG+AGG | - | chr7_3:29061721-29061740 | None:intergenic | 45.0% |
| !! | AGCGGGAGTATTATGTTGTG+AGG | - | chr7_3:29061724-29061743 | None:intergenic | 45.0% |
| ! | GGATATGACTTAGAAGGTGC+AGG | - | chr7_3:29061793-29061812 | None:intergenic | 45.0% |
| CTGCATCATGCAGCATTTCT+TGG | + | chr7_3:29062060-29062079 | Msa1099880:intron | 45.0% | |
| CACTCCATGAAGCTGCATAA+GGG | - | chr7_3:29062318-29062337 | None:intergenic | 45.0% | |
| !! | TATATATATATATATATATG+GGG | - | chr7_3:29060298-29060317 | None:intergenic | 5.0% |
| !! | TTCTAATTTATTTATAATAA+TGG | + | chr7_3:29062034-29062053 | Msa1099880:intron | 5.0% |
| !! | TATATATATATATATATATG+GGG | - | chr7_3:29060298-29060317 | None:intergenic | 5.0% |
| !! | TTCTAATTTATTTATAATAA+TGG | + | chr7_3:29062034-29062053 | Msa1099880:intron | 5.0% |
| ATAACATATCCCGGGCAGAG+GGG | - | chr7_3:29060096-29060115 | None:intergenic | 50.0% | |
| CATAACATATCCCGGGCAGA+GGG | - | chr7_3:29060097-29060116 | None:intergenic | 50.0% | |
| ACATAACATATCCCGGGCAG+AGG | - | chr7_3:29060098-29060117 | None:intergenic | 50.0% | |
| TCCCGCTGAAACCCTAATTC+TGG | - | chr7_3:29061199-29061218 | None:intergenic | 50.0% | |
| ACGAAGGAGATACCAAGGGA+TGG | + | chr7_3:29061381-29061400 | Msa1099880:intron | 50.0% | |
| GACTGGCAATTCAAGGCCTT+TGG | - | chr7_3:29061672-29061691 | None:intergenic | 50.0% | |
| CCACTCCATGAAGCTGCATA+AGG | - | chr7_3:29062319-29062338 | None:intergenic | 50.0% | |
| CCTTATGCAGCTTCATGGAG+TGG | + | chr7_3:29062316-29062335 | Msa1099880:CDS | 50.0% | |
| ATAACATATCCCGGGCAGAG+GGG | - | chr7_3:29060096-29060115 | None:intergenic | 50.0% | |
| CATAACATATCCCGGGCAGA+GGG | - | chr7_3:29060097-29060116 | None:intergenic | 50.0% | |
| ACATAACATATCCCGGGCAG+AGG | - | chr7_3:29060098-29060117 | None:intergenic | 50.0% | |
| TCCCGCTGAAACCCTAATTC+TGG | - | chr7_3:29061199-29061218 | None:intergenic | 50.0% | |
| ACGAAGGAGATACCAAGGGA+TGG | + | chr7_3:29061381-29061400 | Msa1099880:intron | 50.0% | |
| GACTGGCAATTCAAGGCCTT+TGG | - | chr7_3:29061672-29061691 | None:intergenic | 50.0% | |
| CCACTCCATGAAGCTGCATA+AGG | - | chr7_3:29062319-29062338 | None:intergenic | 50.0% | |
| CCTTATGCAGCTTCATGGAG+TGG | + | chr7_3:29062316-29062335 | Msa1099880:CDS | 50.0% | |
| GGCAGAGGGGTTCATGTTAC+CGG | - | chr7_3:29060083-29060102 | None:intergenic | 55.0% | |
| GTAACATGAACCCCTCTGCC+CGG | + | chr7_3:29060083-29060102 | Msa1099880:intron | 55.0% | |
| TAACATGAACCCCTCTGCCC+GGG | + | chr7_3:29060084-29060103 | Msa1099880:intron | 55.0% | |
| GCAGGGAAAGTCGTGAGAGA+AGG | + | chr7_3:29061335-29061354 | Msa1099880:intron | 55.0% | |
| GGCAGAGGGGTTCATGTTAC+CGG | - | chr7_3:29060083-29060102 | None:intergenic | 55.0% | |
| GTAACATGAACCCCTCTGCC+CGG | + | chr7_3:29060083-29060102 | Msa1099880:intron | 55.0% | |
| TAACATGAACCCCTCTGCCC+GGG | + | chr7_3:29060084-29060103 | Msa1099880:intron | 55.0% | |
| GCAGGGAAAGTCGTGAGAGA+AGG | + | chr7_3:29061335-29061354 | Msa1099880:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 29059965 | 29062400 | 29059965 | ID=Msa1099880;Name=Msa1099880 |
| chr7_3 | mRNA | 29059965 | 29062400 | 29059965 | ID=Msa1099880-mRNA-1;Parent=Msa1099880;Name=Msa1099880-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0|0|2|0|84 |
| chr7_3 | exon | 29059965 | 29060082 | 29059965 | ID=Msa1099880-mRNA-1:exon:6142;Parent=Msa1099880-mRNA-1 |
| chr7_3 | exon | 29062267 | 29062400 | 29062267 | ID=Msa1099880-mRNA-1:exon:6143;Parent=Msa1099880-mRNA-1 |
| chr7_3 | CDS | 29059965 | 29060082 | 29059965 | ID=Msa1099880-mRNA-1:cds;Parent=Msa1099880-mRNA-1 |
| chr7_3 | CDS | 29062267 | 29062400 | 29062267 | ID=Msa1099880-mRNA-1:cds;Parent=Msa1099880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
