Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139700 | XP_024629567.1 | 96.694 | 242 | 7 | 1 | 1 | 242 | 1 | 241 | 4.63e-165 | 486 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139700 | sp|Q94A27|SAC2_ARATH | 66.359 | 217 | 72 | 1 | 26 | 242 | 12 | 227 | 6.70e-103 | 318 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139700 | A0A396GEB7 | 96.694 | 242 | 7 | 1 | 1 | 242 | 1 | 241 | 2.21e-165 | 486 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002560 | Msa0139700 | 0.810739 | 9.925000e-51 | -8.615850e-47 |
Msa0010770 | Msa0139700 | 0.806882 | 6.628121e-50 | -8.615850e-47 |
Msa0014570 | Msa0139700 | 0.806164 | 9.394023e-50 | -8.615850e-47 |
Msa0026910 | Msa0139700 | 0.813399 | 2.611088e-51 | -8.615850e-47 |
Msa0027390 | Msa0139700 | 0.819819 | 9.504470e-53 | -8.615850e-47 |
Msa0031180 | Msa0139700 | 0.823250 | 1.532429e-53 | -8.615850e-47 |
Msa0042550 | Msa0139700 | 0.810313 | 1.226494e-50 | -8.615850e-47 |
Msa0043500 | Msa0139700 | 0.821333 | 4.268754e-53 | -8.615850e-47 |
Msa0045340 | Msa0139700 | 0.803828 | 2.893937e-49 | -8.615850e-47 |
Msa0054820 | Msa0139700 | 0.837885 | 3.991358e-57 | -8.615850e-47 |
Msa0055070 | Msa0139700 | 0.806784 | 6.952712e-50 | -8.615850e-47 |
Msa0056450 | Msa0139700 | 0.827491 | 1.519561e-54 | -8.615850e-47 |
Msa0058600 | Msa0139700 | 0.804470 | 2.126907e-49 | -8.615850e-47 |
Msa0061500 | Msa0139700 | 0.806548 | 7.796246e-50 | -8.615850e-47 |
Msa0064110 | Msa0139700 | 0.839854 | 1.235430e-57 | -8.615850e-47 |
Msa0064920 | Msa0139700 | 0.812780 | 3.568329e-51 | -8.615850e-47 |
Msa0074750 | Msa0139700 | 0.805562 | 1.257126e-49 | -8.615850e-47 |
Msa0077450 | Msa0139700 | 0.842658 | 2.260061e-58 | -8.615850e-47 |
Msa0078480 | Msa0139700 | 0.826085 | 3.291532e-54 | -8.615850e-47 |
Msa0078610 | Msa0139700 | 0.813229 | 2.845554e-51 | -8.615850e-47 |
Msa0081650 | Msa0139700 | 0.804727 | 1.879942e-49 | -8.615850e-47 |
Msa0081900 | Msa0139700 | 0.801421 | 9.075704e-49 | -8.615850e-47 |
Msa0082440 | Msa0139700 | 0.807887 | 4.058004e-50 | -8.615850e-47 |
Msa0092410 | Msa0139700 | 0.814887 | 1.225185e-51 | -8.615850e-47 |
Msa0092440 | Msa0139700 | 0.842964 | 1.873925e-58 | -8.615850e-47 |
Msa0096580 | Msa0139700 | 0.809721 | 1.645010e-50 | -8.615850e-47 |
Msa0100160 | Msa0139700 | 0.826377 | 2.804556e-54 | -8.615850e-47 |
Msa0101020 | Msa0139700 | 0.805470 | 1.314204e-49 | -8.615850e-47 |
Msa0126230 | Msa0139700 | 0.814835 | 1.258061e-51 | -8.615850e-47 |
Msa0128180 | Msa0139700 | 0.821948 | 3.077714e-53 | -8.615850e-47 |
Msa0133820 | Msa0139700 | 0.800239 | 1.582467e-48 | -8.615850e-47 |
Msa0138210 | Msa0139700 | 0.810790 | 9.672979e-51 | -8.615850e-47 |
Msa0139700 | Msa0143850 | 0.840320 | 9.337793e-58 | -8.615850e-47 |
Msa0139700 | Msa0144790 | 0.807226 | 5.605614e-50 | -8.615850e-47 |
Msa0139700 | Msa0160670 | 0.842355 | 2.720250e-58 | -8.615850e-47 |
Msa0139700 | Msa0165300 | 0.821143 | 4.722279e-53 | -8.615850e-47 |
Msa0139700 | Msa0170140 | 0.820511 | 6.600239e-53 | -8.615850e-47 |
Msa0139700 | Msa0171200 | 0.802958 | 4.382502e-49 | -8.615850e-47 |
Msa0139700 | Msa0174360 | 0.830421 | 2.964185e-55 | -8.615850e-47 |
Msa0139700 | Msa0178510 | 0.823246 | 1.535651e-53 | -8.615850e-47 |
Msa0139700 | Msa0183420 | 0.813678 | 2.266345e-51 | -8.615850e-47 |
Msa0139700 | Msa0186950 | 0.804079 | 2.566347e-49 | -8.615850e-47 |
Msa0139700 | Msa0187030 | 0.815919 | 7.223692e-52 | -8.615850e-47 |
Msa0139700 | Msa0191890 | 0.816302 | 5.932348e-52 | -8.615850e-47 |
Msa0139700 | Msa0200560 | 0.810128 | 1.344642e-50 | -8.615850e-47 |
Msa0139700 | Msa0200650 | 0.800368 | 1.489118e-48 | -8.615850e-47 |
Msa0139700 | Msa0202930 | 0.802647 | 5.081083e-49 | -8.615850e-47 |
Msa0139700 | Msa0204840 | 0.817384 | 3.392008e-52 | -8.615850e-47 |
Msa0139700 | Msa0218350 | 0.839223 | 1.802256e-57 | -8.615850e-47 |
Msa0139700 | Msa0220730 | 0.811241 | 7.724652e-51 | -8.615850e-47 |
Msa0139700 | Msa0225220 | 0.822411 | 2.402862e-53 | -8.615850e-47 |
Msa0139700 | Msa0227230 | 0.811755 | 5.973575e-51 | -8.615850e-47 |
Msa0139700 | Msa0230370 | 0.832490 | 9.177799e-56 | -8.615850e-47 |
Msa0139700 | Msa0236070 | 0.824776 | 6.721270e-54 | -8.615850e-47 |
Msa0139700 | Msa0237200 | 0.805819 | 1.110284e-49 | -8.615850e-47 |
Msa0139700 | Msa0243250 | 0.813276 | 2.777529e-51 | -8.615850e-47 |
Msa0139700 | Msa0269520 | 0.851200 | 1.036124e-60 | -8.615850e-47 |
Msa0139700 | Msa0269560 | 0.815444 | 9.216250e-52 | -8.615850e-47 |
Msa0139700 | Msa0271550 | 0.835796 | 1.362377e-56 | -8.615850e-47 |
Msa0139700 | Msa0271790 | 0.811720 | 6.080050e-51 | -8.615850e-47 |
Msa0139700 | Msa0274970 | 0.804109 | 2.529458e-49 | -8.615850e-47 |
Msa0139700 | Msa0277420 | 0.805809 | 1.115709e-49 | -8.615850e-47 |
Msa0139700 | Msa0305330 | 0.825265 | 5.151198e-54 | -8.615850e-47 |
Msa0139700 | Msa0307310 | 0.835223 | 1.902037e-56 | -8.615850e-47 |
Msa0139700 | Msa0308460 | 0.830279 | 3.211349e-55 | -8.615850e-47 |
Msa0139700 | Msa0312530 | 0.828118 | 1.073694e-54 | -8.615850e-47 |
Msa0139700 | Msa0315680 | 0.806842 | 6.759434e-50 | -8.615850e-47 |
Msa0139700 | Msa0317740 | 0.816724 | 4.772438e-52 | -8.615850e-47 |
Msa0139700 | Msa0319290 | 0.842711 | 2.188109e-58 | -8.615850e-47 |
Msa0139700 | Msa0320800 | 0.817737 | 2.822872e-52 | -8.615850e-47 |
Msa0139700 | Msa0322680 | 0.825362 | 4.885146e-54 | -8.615850e-47 |
Msa0139700 | Msa0340690 | 0.805330 | 1.406353e-49 | -8.615850e-47 |
Msa0139700 | Msa0342010 | 0.829860 | 4.064430e-55 | -8.615850e-47 |
Msa0139700 | Msa0347950 | 0.821924 | 3.117238e-53 | -8.615850e-47 |
Msa0139700 | Msa0347990 | 0.830005 | 3.747126e-55 | -8.615850e-47 |
Msa0139700 | Msa0358400 | 0.830887 | 2.279237e-55 | -8.615850e-47 |
Msa0139700 | Msa0371950 | 0.824171 | 9.327667e-54 | -8.615850e-47 |
Msa0139700 | Msa0376020 | 0.809853 | 1.540733e-50 | -8.615850e-47 |
Msa0139700 | Msa0382370 | 0.813876 | 2.050092e-51 | -8.615850e-47 |
Msa0139700 | Msa0387050 | 0.820291 | 7.411006e-53 | -8.615850e-47 |
Msa0139700 | Msa0392200 | 0.802328 | 5.910605e-49 | -8.615850e-47 |
Msa0139700 | Msa0397460 | 0.810168 | 1.317771e-50 | -8.615850e-47 |
Msa0139700 | Msa0417330 | 0.815123 | 1.086276e-51 | -8.615850e-47 |
Msa0139700 | Msa0417650 | 0.817748 | 2.807758e-52 | -8.615850e-47 |
Msa0139700 | Msa0417730 | 0.813531 | 2.442017e-51 | -8.615850e-47 |
Msa0139700 | Msa0422180 | 0.810577 | 1.075428e-50 | -8.615850e-47 |
Msa0139700 | Msa0423840 | 0.819119 | 1.372855e-52 | -8.615850e-47 |
Msa0139700 | Msa0428050 | 0.810203 | 1.295385e-50 | -8.615850e-47 |
Msa0139700 | Msa0430950 | 0.800653 | 1.302776e-48 | -8.615850e-47 |
Msa0139700 | Msa0432160 | 0.836141 | 1.113668e-56 | -8.615850e-47 |
Msa0139700 | Msa0432170 | 0.808933 | 2.428130e-50 | -8.615850e-47 |
Msa0139700 | Msa0436370 | 0.816239 | 6.127851e-52 | -8.615850e-47 |
Msa0139700 | Msa0455760 | 0.807924 | 3.985704e-50 | -8.615850e-47 |
Msa0139700 | Msa0468250 | 0.816423 | 5.574101e-52 | -8.615850e-47 |
Msa0139700 | Msa0468320 | 0.806231 | 9.094841e-50 | -8.615850e-47 |
Msa0139700 | Msa0476680 | 0.835893 | 1.287409e-56 | -8.615850e-47 |
Msa0139700 | Msa0480780 | 0.801550 | 8.541887e-49 | -8.615850e-47 |
Msa0139700 | Msa0483740 | 0.802719 | 4.910108e-49 | -8.615850e-47 |
Msa0139700 | Msa0487780 | 0.811055 | 8.476911e-51 | -8.615850e-47 |
Msa0139700 | Msa0506860 | 0.821252 | 4.458080e-53 | -8.615850e-47 |
Msa0139700 | Msa0510290 | 0.820137 | 8.041161e-53 | -8.615850e-47 |
Msa0139700 | Msa0516020 | 0.811564 | 6.574571e-51 | -8.615850e-47 |
Msa0139700 | Msa0518440 | 0.811924 | 5.488983e-51 | -8.615850e-47 |
Msa0139700 | Msa0521010 | 0.833156 | 6.270515e-56 | -8.615850e-47 |
Msa0139700 | Msa0521670 | 0.801803 | 7.579116e-49 | -8.615850e-47 |
Msa0139700 | Msa0530650 | 0.802434 | 5.619864e-49 | -8.615850e-47 |
Msa0139700 | Msa0559500 | 0.812343 | 4.447390e-51 | -8.615850e-47 |
Msa0139700 | Msa0566750 | 0.802336 | 5.889464e-49 | -8.615850e-47 |
Msa0139700 | Msa0572480 | 0.807494 | 4.917529e-50 | -8.615850e-47 |
Msa0139700 | Msa0573040 | 0.808527 | 2.964482e-50 | -8.615850e-47 |
Msa0139700 | Msa0576680 | 0.810003 | 1.430431e-50 | -8.615850e-47 |
Msa0139700 | Msa0579100 | 0.802443 | 5.597876e-49 | -8.615850e-47 |
Msa0139700 | Msa0579200 | 0.807475 | 4.963125e-50 | -8.615850e-47 |
Msa0139700 | Msa0581400 | 0.804220 | 2.398624e-49 | -8.615850e-47 |
Msa0139700 | Msa0594200 | 0.830659 | 2.592815e-55 | -8.615850e-47 |
Msa0139700 | Msa0595600 | 0.816235 | 6.138855e-52 | -8.615850e-47 |
Msa0139700 | Msa0615220 | 0.826339 | 2.864093e-54 | -8.615850e-47 |
Msa0139700 | Msa0616550 | 0.811006 | 8.684718e-51 | -8.615850e-47 |
Msa0139700 | Msa0626990 | 0.808117 | 3.626140e-50 | -8.615850e-47 |
Msa0139700 | Msa0627350 | 0.808509 | 2.991109e-50 | -8.615850e-47 |
Msa0139700 | Msa0629630 | 0.803515 | 3.359748e-49 | -8.615850e-47 |
Msa0139700 | Msa0641730 | 0.821398 | 4.123840e-53 | -8.615850e-47 |
Msa0139700 | Msa0651270 | 0.800194 | 1.615679e-48 | -8.615850e-47 |
Msa0139700 | Msa0656000 | 0.816834 | 4.508368e-52 | -8.615850e-47 |
Msa0139700 | Msa0661320 | 0.818032 | 2.421779e-52 | -8.615850e-47 |
Msa0139700 | Msa0689760 | 0.824405 | 8.216973e-54 | -8.615850e-47 |
Msa0139700 | Msa0704920 | 0.805348 | 1.394027e-49 | -8.615850e-47 |
Msa0139700 | Msa0715410 | 0.809223 | 2.104110e-50 | -8.615850e-47 |
Msa0139700 | Msa0716860 | 0.821018 | 5.045139e-53 | -8.615850e-47 |
Msa0139700 | Msa0721340 | 0.816009 | 6.894766e-52 | -8.615850e-47 |
Msa0139700 | Msa0735160 | 0.809577 | 1.766096e-50 | -8.615850e-47 |
Msa0139700 | Msa0741070 | 0.843204 | 1.618116e-58 | -8.615850e-47 |
Msa0139700 | Msa0741160 | 0.813572 | 2.391150e-51 | -8.615850e-47 |
Msa0139700 | Msa0749400 | 0.810112 | 1.355165e-50 | -8.615850e-47 |
Msa0139700 | Msa0749440 | 0.841650 | 4.179330e-58 | -8.615850e-47 |
Msa0139700 | Msa0750250 | 0.800770 | 1.233380e-48 | -8.615850e-47 |
Msa0139700 | Msa0751260 | 0.817561 | 3.093113e-52 | -8.615850e-47 |
Msa0139700 | Msa0751850 | 0.809668 | 1.688647e-50 | -8.615850e-47 |
Msa0139700 | Msa0756380 | 0.806736 | 7.116486e-50 | -8.615850e-47 |
Msa0139700 | Msa0756530 | 0.802853 | 4.606494e-49 | -8.615850e-47 |
Msa0139700 | Msa0757800 | 0.815033 | 1.137082e-51 | -8.615850e-47 |
Msa0139700 | Msa0763890 | 0.803022 | 4.250548e-49 | -8.615850e-47 |
Msa0139700 | Msa0763920 | 0.818479 | 1.918365e-52 | -8.615850e-47 |
Msa0139700 | Msa0773310 | 0.822644 | 2.121558e-53 | -8.615850e-47 |
Msa0139700 | Msa0780280 | 0.858203 | 9.681286e-63 | -8.615850e-47 |
Msa0139700 | Msa0787150 | 0.802080 | 6.647907e-49 | -8.615850e-47 |
Msa0139700 | Msa0789560 | 0.815693 | 8.112051e-52 | -8.615850e-47 |
Msa0139700 | Msa0795070 | 0.810809 | 9.582365e-51 | -8.615850e-47 |
Msa0139700 | Msa0800700 | 0.802698 | 4.957947e-49 | -8.615850e-47 |
Msa0139700 | Msa0809140 | 0.804413 | 2.186613e-49 | -8.615850e-47 |
Msa0139700 | Msa0821190 | 0.806512 | 7.936759e-50 | -8.615850e-47 |
Msa0139700 | Msa0821800 | 0.857963 | 1.140436e-62 | -8.615850e-47 |
Msa0139700 | Msa0828660 | 0.836299 | 1.014919e-56 | -8.615850e-47 |
Msa0139700 | Msa0831150 | 0.803304 | 3.715961e-49 | -8.615850e-47 |
Msa0139700 | Msa0831850 | 0.819148 | 1.352173e-52 | -8.615850e-47 |
Msa0139700 | Msa0832090 | 0.831354 | 1.750683e-55 | -8.615850e-47 |
Msa0139700 | Msa0844110 | 0.813997 | 1.928044e-51 | -8.615850e-47 |
Msa0139700 | Msa0857300 | 0.808701 | 2.721617e-50 | -8.615850e-47 |
Msa0139700 | Msa0861830 | 0.850278 | 1.882867e-60 | -8.615850e-47 |
Msa0139700 | Msa0868160 | 0.819083 | 1.399378e-52 | -8.615850e-47 |
Msa0139700 | Msa0873860 | 0.832466 | 9.305382e-56 | -8.615850e-47 |
Msa0139700 | Msa0892570 | 0.810916 | 9.083962e-51 | -8.615850e-47 |
Msa0139700 | Msa0896240 | 0.800207 | 1.605986e-48 | -8.615850e-47 |
Msa0139700 | Msa0902710 | 0.813559 | 2.407988e-51 | -8.615850e-47 |
Msa0139700 | Msa0902830 | 0.812719 | 3.681069e-51 | -8.615850e-47 |
Msa0139700 | Msa0903390 | 0.815081 | 1.110008e-51 | -8.615850e-47 |
Msa0139700 | Msa0925280 | 0.802500 | 5.448221e-49 | -8.615850e-47 |
Msa0139700 | Msa0926670 | 0.825422 | 4.728949e-54 | -8.615850e-47 |
Msa0139700 | Msa0929950 | 0.812818 | 3.500995e-51 | -8.615850e-47 |
Msa0139700 | Msa0936390 | 0.803009 | 4.276108e-49 | -8.615850e-47 |
Msa0139700 | Msa0939000 | 0.800184 | 1.623131e-48 | -8.615850e-47 |
Msa0139700 | Msa0945240 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
Msa0139700 | Msa0975940 | 0.812925 | 3.316960e-51 | -8.615850e-47 |
Msa0139700 | Msa0986510 | 0.815647 | 8.304447e-52 | -8.615850e-47 |
Msa0139700 | Msa1008750 | 0.836661 | 8.211445e-57 | -8.615850e-47 |
Msa0139700 | Msa1010070 | 0.827698 | 1.354903e-54 | -8.615850e-47 |
Msa0139700 | Msa1012590 | -0.804344 | 2.259415e-49 | -8.615850e-47 |
Msa0139700 | Msa1031820 | 0.814971 | 1.174182e-51 | -8.615850e-47 |
Msa0139700 | Msa1033970 | 0.825283 | 5.101099e-54 | -8.615850e-47 |
Msa0139700 | Msa1034500 | 0.803132 | 4.034449e-49 | -8.615850e-47 |
Msa0139700 | Msa1038080 | 0.807132 | 5.869874e-50 | -8.615850e-47 |
Msa0139700 | Msa1058580 | 0.803327 | 3.676007e-49 | -8.615850e-47 |
Msa0139700 | Msa1077070 | 0.804899 | 1.731267e-49 | -8.615850e-47 |
Msa0139700 | Msa1080960 | 0.816390 | 5.668959e-52 | -8.615850e-47 |
Msa0139700 | Msa1093480 | 0.810119 | 1.350537e-50 | -8.615850e-47 |
Msa0139700 | Msa1096060 | 0.821459 | 3.992384e-53 | -8.615850e-47 |
Msa0139700 | Msa1098890 | 0.801189 | 1.012459e-48 | -8.615850e-47 |
Msa0139700 | Msa1099880 | 0.804417 | 2.181657e-49 | -8.615850e-47 |
Msa0139700 | Msa1113010 | 0.828468 | 8.843825e-55 | -8.615850e-47 |
Msa0139700 | Msa1115280 | 0.821926 | 3.113670e-53 | -8.615850e-47 |
Msa0139700 | Msa1118760 | 0.804416 | 2.182917e-49 | -8.615850e-47 |
Msa0139700 | Msa1121110 | 0.802186 | 6.323049e-49 | -8.615850e-47 |
Msa0139700 | Msa1133570 | 0.803634 | 3.174493e-49 | -8.615850e-47 |
Msa0139700 | Msa1142670 | 0.800383 | 1.478949e-48 | -8.615850e-47 |
Msa0139700 | Msa1143020 | 0.810506 | 1.114526e-50 | -8.615850e-47 |
Msa0139700 | Msa1144940 | 0.806999 | 6.260630e-50 | -8.615850e-47 |
Msa0139700 | Msa1168550 | 0.818371 | 2.029895e-52 | -8.615850e-47 |
Msa0139700 | Msa1168590 | 0.818370 | 2.031229e-52 | -8.615850e-47 |
Msa0139700 | Msa1176270 | 0.810581 | 1.073751e-50 | -8.615850e-47 |
Msa0139700 | Msa1177780 | 0.810871 | 9.292165e-51 | -8.615850e-47 |
Msa0139700 | Msa1188180 | 0.808255 | 3.388257e-50 | -8.615850e-47 |
Msa0139700 | Msa1190970 | 0.816292 | 5.963209e-52 | -8.615850e-47 |
Msa0139700 | Msa1205370 | 0.805174 | 1.516181e-49 | -8.615850e-47 |
Msa0139700 | Msa1211340 | 0.819468 | 1.143273e-52 | -8.615850e-47 |
Msa0139700 | Msa1225200 | 0.810696 | 1.013890e-50 | -8.615850e-47 |
Msa0139700 | Msa1244640 | 0.811861 | 5.665080e-51 | -8.615850e-47 |
Msa0139700 | Msa1250730 | 0.802442 | 5.600271e-49 | -8.615850e-47 |
Msa0139700 | Msa1258370 | 0.811489 | 6.823620e-51 | -8.615850e-47 |
Msa0139700 | Msa1259640 | 0.818429 | 1.969465e-52 | -8.615850e-47 |
Msa0139700 | Msa1262010 | 0.801603 | 8.331137e-49 | -8.615850e-47 |
Msa0139700 | Msa1283740 | 0.824431 | 8.100095e-54 | -8.615850e-47 |
Msa0139700 | Msa1286550 | 0.811916 | 5.509826e-51 | -8.615850e-47 |
Msa0139700 | Msa1288450 | 0.836667 | 8.181155e-57 | -8.615850e-47 |
Msa0139700 | Msa1307550 | 0.929505 | 6.307721e-93 | -8.615850e-47 |
Msa0139700 | Msa1319820 | 0.813444 | 2.551760e-51 | -8.615850e-47 |
Msa0139700 | Msa1329790 | 0.816770 | 4.658966e-52 | -8.615850e-47 |
Msa0139700 | Msa1330180 | 0.804392 | 2.208629e-49 | -8.615850e-47 |
Msa0139700 | Msa1332050 | 0.800967 | 1.123881e-48 | -8.615850e-47 |
Msa0139700 | Msa1333680 | 0.831182 | 1.929474e-55 | -8.615850e-47 |
Msa0139700 | Msa1333730 | 0.845107 | 4.991768e-59 | -8.615850e-47 |
Msa0139700 | Msa1335710 | 0.838340 | 3.048573e-57 | -8.615850e-47 |
Msa0139700 | Msa1346750 | 0.806299 | 8.799698e-50 | -8.615850e-47 |
Msa0139700 | Msa1349450 | 0.836592 | 8.550997e-57 | -8.615850e-47 |
Msa0139700 | Msa1359560 | 0.809450 | 1.880772e-50 | -8.615850e-47 |
Msa0139700 | Msa1366300 | 0.834435 | 3.001802e-56 | -8.615850e-47 |
Msa0139700 | Msa1371940 | 0.844401 | 7.732990e-59 | -8.615850e-47 |
Msa0139700 | Msa1372150 | 0.816706 | 4.816492e-52 | -8.615850e-47 |
Msa0139700 | Msa1372290 | 0.804176 | 2.449839e-49 | -8.615850e-47 |
Msa0139700 | Msa1379850 | 0.817475 | 3.234086e-52 | -8.615850e-47 |
Msa0139700 | Msa1380900 | 0.806268 | 8.935143e-50 | -8.615850e-47 |
Msa0139700 | Msa1382790 | 0.803843 | 2.872576e-49 | -8.615850e-47 |
Msa0139700 | Msa1392700 | 0.801940 | 7.103367e-49 | -8.615850e-47 |
Msa0139700 | Msa1400070 | 0.801022 | 1.095408e-48 | -8.615850e-47 |
Msa0139700 | Msa1400120 | 0.818741 | 1.673035e-52 | -8.615850e-47 |
Msa0139700 | Msa1401270 | 0.818352 | 2.049994e-52 | -8.615850e-47 |
Msa0139700 | Msa1401460 | 0.815890 | 7.331997e-52 | -8.615850e-47 |
Msa0139700 | Msa1420250 | 0.820974 | 5.164424e-53 | -8.615850e-47 |
Msa0139700 | Msa1422840 | 0.813422 | 2.579966e-51 | -8.615850e-47 |
Msa0139700 | Msa1426910 | 0.802074 | 6.667800e-49 | -8.615850e-47 |
Msa0139700 | Msa1433220 | 0.862475 | 4.937787e-64 | -8.615850e-47 |
Msa0139700 | Msa1438520 | 0.804047 | 2.605339e-49 | -8.615850e-47 |
Msa0139700 | Msa1439710 | 0.806130 | 9.553037e-50 | -8.615850e-47 |
Msa0139700 | Msa1445220 | 0.804572 | 2.025229e-49 | -8.615850e-47 |
Msa0139700 | Msa1446780 | 0.814809 | 1.275007e-51 | -8.615850e-47 |
Msa0139700 | Msa1462930 | 0.805979 | 1.027790e-49 | -8.615850e-47 |
Msa0139700 | Msa1466590 | 0.801112 | 1.050141e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139700 | MtrunA17_Chr8g0344911 | 96.694 | 242 | 7 | 1 | 1 | 242 | 1 | 241 | 4.26e-169 | 486 |
Msa0139700 | MtrunA17_Chr4g0069981 | 73.953 | 215 | 54 | 2 | 28 | 242 | 21 | 233 | 2.83e-113 | 343 |
Msa0139700 | MtrunA17_Chr4g0014511 | 55.760 | 217 | 95 | 1 | 26 | 242 | 35 | 250 | 4.90e-80 | 257 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0139700 | AT3G14205.1 | 66.359 | 217 | 72 | 1 | 26 | 242 | 12 | 227 | 6.81e-104 | 318 |
Msa0139700 | AT3G43220.2 | 64.286 | 210 | 73 | 2 | 33 | 242 | 15 | 222 | 2.81e-92 | 286 |
Msa0139700 | AT3G43220.3 | 64.286 | 210 | 73 | 2 | 33 | 242 | 15 | 222 | 1.63e-91 | 286 |
Msa0139700 | AT3G43220.1 | 64.286 | 210 | 73 | 2 | 33 | 242 | 15 | 222 | 2.21e-91 | 286 |
Msa0139700 | AT5G20840.1 | 64.286 | 210 | 73 | 2 | 33 | 242 | 24 | 231 | 4.85e-91 | 285 |
Msa0139700 | AT1G17340.1 | 58.095 | 210 | 87 | 1 | 33 | 242 | 19 | 227 | 1.12e-83 | 265 |
Msa0139700 | AT1G22620.1 | 57.143 | 210 | 89 | 1 | 33 | 242 | 34 | 242 | 3.46e-79 | 255 |
Msa0139700 | AT3G14205.2 | 66.038 | 53 | 17 | 1 | 190 | 242 | 1 | 52 | 5.88e-16 | 77.0 |
Msa0139700 | AT3G51460.1 | 22.549 | 204 | 134 | 5 | 26 | 225 | 4 | 187 | 1.11e-11 | 64.3 |
Msa0139700 | AT3G51830.1 | 29.126 | 103 | 73 | 0 | 93 | 195 | 50 | 152 | 7.31e-11 | 62.0 |
Find 42 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAGTGTGCGATCAAATT+TGG | 0.181811 | 1_3:+73543375 | Msa0139700:CDS |
TGGACTGTTGCCTTAGTCTA+TGG | 0.221556 | 1_3:+73544338 | Msa0139700:CDS |
TATATGAAACACTGTTTGTT+TGG | 0.269818 | 1_3:+73544267 | Msa0139700:CDS |
AGTCTTCAAAAGAACTTATC+TGG | 0.334802 | 1_3:+73544221 | Msa0139700:CDS |
CGCACACTTGAATGTGGAAT+TGG | 0.369716 | 1_3:-73543364 | None:intergenic |
CAACAGTCCAGGAAGTATTC+TGG | 0.370306 | 1_3:-73544325 | None:intergenic |
CAAGAAGTTTCTATGCAGTA+TGG | 0.374428 | 1_3:+73544151 | Msa0139700:CDS |
GGTCTTAAAGATTGACAGAT+TGG | 0.396654 | 1_3:+73542957 | Msa0139700:CDS |
GTAATAAGCAGCATGTAGTA+TGG | 0.398368 | 1_3:-73543274 | None:intergenic |
AGTTCTTAACTCGTGGAATC+AGG | 0.401648 | 1_3:+73544294 | Msa0139700:CDS |
GCTCAGAGATTCTATATGAT+TGG | 0.401655 | 1_3:+73542907 | Msa0139700:intron |
TTTGCTACATGCAGAAGTTT+AGG | 0.409804 | 1_3:+73541300 | Msa0139700:CDS |
GCTGGTGTTGAAGTTGGTGC+TGG | 0.420803 | 1_3:+73541251 | Msa0139700:CDS |
ATAATCTCCAGAATACTTCC+TGG | 0.425618 | 1_3:+73544318 | Msa0139700:CDS |
AGCTCAAAACTTTACATCAA+TGG | 0.447201 | 1_3:-73541010 | None:intergenic |
AAATTTGTTACAACTTGCTA+TGG | 0.480675 | 1_3:+73543087 | Msa0139700:CDS |
TAGGCTCTATGAAACTTCTC+AGG | 0.480764 | 1_3:+73541319 | Msa0139700:CDS |
AGGAAGATCGGCACAATATG+TGG | 0.493549 | 1_3:+73543304 | Msa0139700:CDS |
GGAGATTGAAGAAGAGAAGG+TGG | 0.516279 | 1_3:+73541217 | Msa0139700:CDS |
GAGATTGAAGAAGAGAAGGT+GGG | 0.520849 | 1_3:+73541218 | Msa0139700:CDS |
ATTACAAAGCGGAGGAAGAT+CGG | 0.531117 | 1_3:+73543292 | Msa0139700:CDS |
TGAAATGCTGAAGCGTCTAC+AGG | 0.535888 | 1_3:+73543038 | Msa0139700:CDS |
GCGTCTACAGGATGGAAACT+TGG | 0.538498 | 1_3:+73543050 | Msa0139700:CDS |
AGTGCTGCTGGTGTTGAAGT+TGG | 0.547360 | 1_3:+73541245 | Msa0139700:CDS |
ATAGACTAAGGCAACAGTCC+AGG | 0.549517 | 1_3:-73544336 | None:intergenic |
GATGGAGATTGAAGAAGAGA+AGG | 0.551345 | 1_3:+73541214 | Msa0139700:CDS |
AGGGATCTGAATTGTGATGA+TGG | 0.556554 | 1_3:+73541196 | Msa0139700:exon |
AGATTGAAGAAGAGAAGGTG+GGG | 0.558991 | 1_3:+73541219 | Msa0139700:CDS |
TTTGATCGCACACTTGAATG+TGG | 0.561611 | 1_3:-73543370 | None:intergenic |
AAGGTGGGGACAAGTGCTGC+TGG | 0.571459 | 1_3:+73541233 | Msa0139700:CDS |
ACAACTTGCTATGGAATCAT+CGG | 0.580415 | 1_3:+73543096 | Msa0139700:CDS |
TTATCTGGTCATAATGTCAC+GGG | 0.584534 | 1_3:+73544236 | Msa0139700:CDS |
TGGAACGAGTTCTTAACTCG+TGG | 0.592450 | 1_3:+73544287 | Msa0139700:CDS |
ATGCTGAAGCGTCTACAGGA+TGG | 0.593299 | 1_3:+73543042 | Msa0139700:CDS |
CTTATCTGGTCATAATGTCA+CGG | 0.598724 | 1_3:+73544235 | Msa0139700:CDS |
CAGGATGGAAACTTGGCCAC+AGG | 0.599825 | 1_3:+73543057 | Msa0139700:CDS |
GATGGAAACTTGGCCACAGG+AGG | 0.606318 | 1_3:+73543060 | Msa0139700:CDS |
AACAAATTTAAGCCCTCCTG+TGG | 0.608055 | 1_3:-73543073 | None:intergenic |
ATGCAGTATGGATCTTACAA+AGG | 0.656804 | 1_3:+73544163 | Msa0139700:CDS |
ATGGAAACTTGGCCACAGGA+GGG | 0.658115 | 1_3:+73543061 | Msa0139700:CDS |
TGCTGCTTATTACAAAGCGG+AGG | 0.690628 | 1_3:+73543284 | Msa0139700:CDS |
ACATGCTGCTTATTACAAAG+CGG | 0.716900 | 1_3:+73543281 | Msa0139700:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATGTTAACTTAAAT+AGG | + | chr1_3:73542749-73542768 | Msa0139700:intron | 10.0% |
!! | AAAAAAAAAAACATTATGTG+TGG | + | chr1_3:73540986-73541005 | Msa0139700:five_prime_UTR | 15.0% |
!!! | TTTTTATTGTACTTGTTTTT+GGG | + | chr1_3:73541032-73541051 | Msa0139700:five_prime_UTR | 15.0% |
!!! | TTGTTTTTGTGTTTTATTTT+TGG | + | chr1_3:73541481-73541500 | Msa0139700:intron | 15.0% |
!! | TTTGTTTAATTATTCATTCA+TGG | + | chr1_3:73541528-73541547 | Msa0139700:intron | 15.0% |
!! | ATCTTTATAAATGAGAAATA+TGG | + | chr1_3:73542305-73542324 | Msa0139700:intron | 15.0% |
!!! | ATTGTTATTGTTATGAATTA+CGG | + | chr1_3:73543520-73543539 | Msa0139700:intron | 15.0% |
!!! | TTCGTTTTTTAATATACATT+TGG | + | chr1_3:73544008-73544027 | Msa0139700:intron | 15.0% |
!!! | CTTTTTATTGTACTTGTTTT+TGG | + | chr1_3:73541031-73541050 | Msa0139700:five_prime_UTR | 20.0% |
!!! | ACATGAATTGTTTTTTAATG+AGG | + | chr1_3:73541627-73541646 | Msa0139700:intron | 20.0% |
!!! | AACGTTTTTTTTTTCCTAAA+AGG | + | chr1_3:73542369-73542388 | Msa0139700:intron | 20.0% |
!! | CTTATCATTATATTATCTGT+GGG | - | chr1_3:73542576-73542595 | None:intergenic | 20.0% |
!!! | AAAGTTTTACTATGATATAG+AGG | - | chr1_3:73543132-73543151 | None:intergenic | 20.0% |
!!! | TATGGTATCTCTTTTTATTT+AGG | + | chr1_3:73543232-73543251 | Msa0139700:intron | 20.0% |
!!! | ATGGTATCTCTTTTTATTTA+GGG | + | chr1_3:73543233-73543252 | Msa0139700:intron | 20.0% |
!! | ACAATAACAATTAAGTACAA+TGG | - | chr1_3:73543511-73543530 | None:intergenic | 20.0% |
!!! | TTATGAATTACGGTTTTTAT+CGG | + | chr1_3:73543530-73543549 | Msa0139700:intron | 20.0% |
!! | TACAAAGAAAAACTAAAATG+TGG | - | chr1_3:73543623-73543642 | None:intergenic | 20.0% |
!!! | TTTATCGTAAGTTCATTTTA+CGG | + | chr1_3:73543887-73543906 | Msa0139700:intron | 20.0% |
!! | TTTAAAAAATCCATAGACTA+AGG | - | chr1_3:73544351-73544370 | None:intergenic | 20.0% |
! | TTTAGGAAATGGAAAAAAAC+AGG | - | chr1_3:73540862-73540881 | None:intergenic | 25.0% |
!!! | TTTTTTAAGGAATCAGAAGA+AGG | - | chr1_3:73540893-73540912 | None:intergenic | 25.0% |
!!! | GAGAAAAAGTAGCTTTTTTA+AGG | - | chr1_3:73540906-73540925 | None:intergenic | 25.0% |
!!! | TTTGTGTTGATTTTTTCTGT+TGG | + | chr1_3:73541124-73541143 | Msa0139700:five_prime_UTR | 25.0% |
!! | GTTTTTGAATTCTGTTCAAT+TGG | + | chr1_3:73541693-73541712 | Msa0139700:intron | 25.0% |
! | GAAAGATTATAATCCATTTG+TGG | + | chr1_3:73541771-73541790 | Msa0139700:intron | 25.0% |
!! | TCAAATGATTTTGCAGAAAA+TGG | + | chr1_3:73541843-73541862 | Msa0139700:intron | 25.0% |
!! | AAAGTAATAGCTATCCTTTT+AGG | - | chr1_3:73542386-73542405 | None:intergenic | 25.0% |
! | GCTTATCATTATATTATCTG+TGG | - | chr1_3:73542577-73542596 | None:intergenic | 25.0% |
!! | ATAATGATAAGCTGTTGATT+TGG | + | chr1_3:73542585-73542604 | Msa0139700:intron | 25.0% |
!! | TTTGGAAAGACATTTAAGTT+TGG | + | chr1_3:73542603-73542622 | Msa0139700:intron | 25.0% |
!!! | AAATTTGTTACAACTTGCTA+TGG | + | chr1_3:73543087-73543106 | Msa0139700:CDS | 25.0% |
! | TTTACTATGATATAGAGGAT+AGG | - | chr1_3:73543127-73543146 | None:intergenic | 25.0% |
! | ATAATAACTCAACTGTCTTA+TGG | + | chr1_3:73543214-73543233 | Msa0139700:intron | 25.0% |
!! | ATCAAATTTGGCATTTTCTA+AGG | + | chr1_3:73543387-73543406 | Msa0139700:CDS | 25.0% |
! | ATGAACTTATGAAAACAACA+AGG | - | chr1_3:73543867-73543886 | None:intergenic | 25.0% |
! | GTAACTATTTGAGTAAAACA+AGG | + | chr1_3:73543951-73543970 | Msa0139700:intron | 25.0% |
! | ATACATTTGGTTAGAGTTAT+TGG | + | chr1_3:73544021-73544040 | Msa0139700:intron | 25.0% |
! | AGATGGTCTATATTAAATGA+AGG | - | chr1_3:73544089-73544108 | None:intergenic | 25.0% |
! | TATATGAAACACTGTTTGTT+TGG | + | chr1_3:73544267-73544286 | Msa0139700:CDS | 25.0% |
!!! | AGGTGTTTAGTTTTAGGAAA+TGG | - | chr1_3:73540873-73540892 | None:intergenic | 30.0% |
!!! | AGAAGAAGGTGTTTAGTTTT+AGG | - | chr1_3:73540879-73540898 | None:intergenic | 30.0% |
AGCTCAAAACTTTACATCAA+TGG | - | chr1_3:73541013-73541032 | None:intergenic | 30.0% | |
AGATTGTTTCAATTGAGCAA+AGG | + | chr1_3:73541563-73541582 | Msa0139700:intron | 30.0% | |
! | ATTTTGCAGAAAATGGCTTA+TGG | + | chr1_3:73541850-73541869 | Msa0139700:intron | 30.0% |
ATCTGAAAACAATGGAGAAT+AGG | - | chr1_3:73541879-73541898 | None:intergenic | 30.0% | |
TTAGTCGGCAAAAAGTAATA+GGG | - | chr1_3:73542179-73542198 | None:intergenic | 30.0% | |
ATTAGTCGGCAAAAAGTAAT+AGG | - | chr1_3:73542180-73542199 | None:intergenic | 30.0% | |
AAAAAAGCAGACAGATTAGT+CGG | - | chr1_3:73542194-73542213 | None:intergenic | 30.0% | |
TCAGTATTCAGTAATATCAC+AGG | - | chr1_3:73542250-73542269 | None:intergenic | 30.0% | |
!! | TACTGATGAAGTGTTTTTAC+AGG | + | chr1_3:73542264-73542283 | Msa0139700:intron | 30.0% |
! | TTGTCTTATTCTCCTCAATT+TGG | + | chr1_3:73542408-73542427 | Msa0139700:intron | 30.0% |
TATATTATCTGTGGGAGAAA+AGG | - | chr1_3:73542568-73542587 | None:intergenic | 30.0% | |
TTACGATGCTTTCTAATTAC+CGG | + | chr1_3:73542708-73542727 | Msa0139700:intron | 30.0% | |
!! | AATATACGAAAGAGCACTAT+TGG | + | chr1_3:73542860-73542879 | Msa0139700:intron | 30.0% |
AATCTCTGAGCATAGAAAAA+TGG | - | chr1_3:73542898-73542917 | None:intergenic | 30.0% | |
! | GAGACAAAAACAGAACATTT+TGG | + | chr1_3:73542932-73542951 | Msa0139700:CDS | 30.0% |
! | CAAAAACAGAACATTTTGGA+AGG | + | chr1_3:73542936-73542955 | Msa0139700:CDS | 30.0% |
ACAATTAAGTACAATGGACA+GGG | - | chr1_3:73543505-73543524 | None:intergenic | 30.0% | |
AACAATTAAGTACAATGGAC+AGG | - | chr1_3:73543506-73543525 | None:intergenic | 30.0% | |
AACTTATGAAAACAACAAGG+AGG | - | chr1_3:73543864-73543883 | None:intergenic | 30.0% | |
! | AGTAAAACAAGGTATTTCCA+GGG | + | chr1_3:73543962-73543981 | Msa0139700:intron | 30.0% |
AATATAGACCATCTCACTAA+TGG | + | chr1_3:73544095-73544114 | Msa0139700:intron | 30.0% | |
AAAAAAGTCCATTAGTGAGA+TGG | - | chr1_3:73544106-73544125 | None:intergenic | 30.0% | |
AGTCTTCAAAAGAACTTATC+TGG | + | chr1_3:73544221-73544240 | Msa0139700:CDS | 30.0% | |
!!! | AGCTTTGTTTTGAAGCTCAA+GGG | + | chr1_3:73541177-73541196 | Msa0139700:five_prime_UTR | 35.0% |
TTTGCTACATGCAGAAGTTT+AGG | + | chr1_3:73541300-73541319 | Msa0139700:CDS | 35.0% | |
GTGGATTCTTCAAGAAAACA+TGG | + | chr1_3:73541722-73541741 | Msa0139700:intron | 35.0% | |
TATAATCTTTCAAGCCAAGC+AGG | - | chr1_3:73541762-73541781 | None:intergenic | 35.0% | |
AACACAAATGACACCACAAA+TGG | - | chr1_3:73541787-73541806 | None:intergenic | 35.0% | |
! | TCTCCATTGTTTTCAGATTG+TGG | + | chr1_3:73541881-73541900 | Msa0139700:intron | 35.0% |
! | CTCCATTGTTTTCAGATTGT+GGG | + | chr1_3:73541882-73541901 | Msa0139700:intron | 35.0% |
! | TCCATTGTTTTCAGATTGTG+GGG | + | chr1_3:73541883-73541902 | Msa0139700:intron | 35.0% |
GCTTATGCCAATAAGCTATT+TGG | + | chr1_3:73542026-73542045 | Msa0139700:intron | 35.0% | |
TATGCCAATAAGCTATTTGG+AGG | + | chr1_3:73542029-73542048 | Msa0139700:intron | 35.0% | |
AGTTCCTCCAAATAGCTTAT+TGG | - | chr1_3:73542036-73542055 | None:intergenic | 35.0% | |
AAAAAGTAATAGGGGGAGTT+TGG | - | chr1_3:73542170-73542189 | None:intergenic | 35.0% | |
TAGTCGGCAAAAAGTAATAG+GGG | - | chr1_3:73542178-73542197 | None:intergenic | 35.0% | |
GGAATCTTTCAAGAGAAATG+TGG | - | chr1_3:73542229-73542248 | None:intergenic | 35.0% | |
TCCTCAATTTGGTAAGATTG+AGG | + | chr1_3:73542419-73542438 | Msa0139700:intron | 35.0% | |
TCCTCAATCTTACCAAATTG+AGG | - | chr1_3:73542423-73542442 | None:intergenic | 35.0% | |
AGATTCTGGATATAGTCACA+TGG | - | chr1_3:73542449-73542468 | None:intergenic | 35.0% | |
GTGACTATATCCAGAATCTT+TGG | + | chr1_3:73542450-73542469 | Msa0139700:intron | 35.0% | |
CAGAATCTTTGGCTGAAAAT+GGG | + | chr1_3:73542461-73542480 | Msa0139700:intron | 35.0% | |
AGAATCTTTGGCTGAAAATG+GGG | + | chr1_3:73542462-73542481 | Msa0139700:intron | 35.0% | |
AATGGGGAAAAGGCTAATTA+AGG | + | chr1_3:73542478-73542497 | Msa0139700:intron | 35.0% | |
! | TTCTGGAAATGGGATCTAAA+AGG | + | chr1_3:73542535-73542554 | Msa0139700:intron | 35.0% |
! | AACGACAAGATTTTCTCAGA+AGG | - | chr1_3:73542825-73542844 | None:intergenic | 35.0% |
GCTCAGAGATTCTATATGAT+TGG | + | chr1_3:73542907-73542926 | Msa0139700:intron | 35.0% | |
GGTCTTAAAGATTGACAGAT+TGG | + | chr1_3:73542957-73542976 | Msa0139700:CDS | 35.0% | |
!! | ACAACTTGCTATGGAATCAT+CGG | + | chr1_3:73543096-73543115 | Msa0139700:CDS | 35.0% |
GTAATAAGCAGCATGTAGTA+TGG | - | chr1_3:73543277-73543296 | None:intergenic | 35.0% | |
! | ACATGCTGCTTATTACAAAG+CGG | + | chr1_3:73543281-73543300 | Msa0139700:CDS | 35.0% |
TTCAAGTGTGCGATCAAATT+TGG | + | chr1_3:73543375-73543394 | Msa0139700:CDS | 35.0% | |
!! | CATTTTCTAAGGATGAGAAC+AGG | + | chr1_3:73543398-73543417 | Msa0139700:CDS | 35.0% |
ATGTACCTGTAATGTGTCTA+TGG | + | chr1_3:73543438-73543457 | Msa0139700:intron | 35.0% | |
ATGTACCATAGACACATTAC+AGG | - | chr1_3:73543446-73543465 | None:intergenic | 35.0% | |
! | TTCATTTTACGGAACTGTAC+AGG | + | chr1_3:73543898-73543917 | Msa0139700:intron | 35.0% |
! | GAGTAAAACAAGGTATTTCC+AGG | + | chr1_3:73543961-73543980 | Msa0139700:intron | 35.0% |
CAAGAAGTTTCTATGCAGTA+TGG | + | chr1_3:73544151-73544170 | Msa0139700:CDS | 35.0% | |
ATGCAGTATGGATCTTACAA+AGG | + | chr1_3:73544163-73544182 | Msa0139700:CDS | 35.0% | |
CTTATCTGGTCATAATGTCA+CGG | + | chr1_3:73544235-73544254 | Msa0139700:CDS | 35.0% | |
TTATCTGGTCATAATGTCAC+GGG | + | chr1_3:73544236-73544255 | Msa0139700:CDS | 35.0% | |
ATAATCTCCAGAATACTTCC+TGG | + | chr1_3:73544318-73544337 | Msa0139700:CDS | 35.0% | |
!!! | GAGCTTTGTTTTGAAGCTCA+AGG | + | chr1_3:73541176-73541195 | Msa0139700:five_prime_UTR | 40.0% |
AGGGATCTGAATTGTGATGA+TGG | + | chr1_3:73541196-73541215 | Msa0139700:exon | 40.0% | |
GATGGAGATTGAAGAAGAGA+AGG | + | chr1_3:73541214-73541233 | Msa0139700:CDS | 40.0% | |
GAGATTGAAGAAGAGAAGGT+GGG | + | chr1_3:73541218-73541237 | Msa0139700:CDS | 40.0% | |
AGATTGAAGAAGAGAAGGTG+GGG | + | chr1_3:73541219-73541238 | Msa0139700:CDS | 40.0% | |
TAGGCTCTATGAAACTTCTC+AGG | + | chr1_3:73541319-73541338 | Msa0139700:CDS | 40.0% | |
AAGAAAACATGGATCCATCC+AGG | + | chr1_3:73541733-73541752 | Msa0139700:intron | 40.0% | |
! | CCATTGTTTTCAGATTGTGG+GGG | + | chr1_3:73541884-73541903 | Msa0139700:intron | 40.0% |
AGTCGGCAAAAAGTAATAGG+GGG | - | chr1_3:73542177-73542196 | None:intergenic | 40.0% | |
! | CCATTTTCAGCCAAAGATTC+TGG | - | chr1_3:73542463-73542482 | None:intergenic | 40.0% |
CCAGAATCTTTGGCTGAAAA+TGG | + | chr1_3:73542460-73542479 | Msa0139700:intron | 40.0% | |
TTTGGCTGAAAATGGGGAAA+AGG | + | chr1_3:73542468-73542487 | Msa0139700:intron | 40.0% | |
!! | AAAATGCCGCTTTCTTCTTC+TGG | + | chr1_3:73542518-73542537 | Msa0139700:intron | 40.0% |
CCATTTCCAGAAGAAGAAAG+CGG | - | chr1_3:73542527-73542546 | None:intergenic | 40.0% | |
! | CGCTTTCTTCTTCTGGAAAT+GGG | + | chr1_3:73542525-73542544 | Msa0139700:intron | 40.0% |
TTATCTGTGGGAGAAAAGGA+AGG | - | chr1_3:73542564-73542583 | None:intergenic | 40.0% | |
AACAAATTTAAGCCCTCCTG+TGG | - | chr1_3:73543076-73543095 | None:intergenic | 40.0% | |
ATTACAAAGCGGAGGAAGAT+CGG | + | chr1_3:73543292-73543311 | Msa0139700:CDS | 40.0% | |
TTTGATCGCACACTTGAATG+TGG | - | chr1_3:73543373-73543392 | None:intergenic | 40.0% | |
AGTACCACAGAAAGATGAGA+GGG | - | chr1_3:73543718-73543737 | None:intergenic | 40.0% | |
AGTTCTTAACTCGTGGAATC+AGG | + | chr1_3:73544294-73544313 | Msa0139700:CDS | 40.0% | |
GGAGATTGAAGAAGAGAAGG+TGG | + | chr1_3:73541217-73541236 | Msa0139700:CDS | 45.0% | |
!!! | GTTGGTGCTGGTTTTGAAGA+TGG | + | chr1_3:73541263-73541282 | Msa0139700:CDS | 45.0% |
! | GTGCAGTTTTCTTGTTCTGC+TGG | + | chr1_3:73541456-73541475 | Msa0139700:intron | 45.0% |
TCTGTTCAATTGGATTCGCG+TGG | + | chr1_3:73541703-73541722 | Msa0139700:intron | 45.0% | |
CCCCCACAATCTGAAAACAA+TGG | - | chr1_3:73541887-73541906 | None:intergenic | 45.0% | |
!! | TTTCAGATTGTGGGGGCATT+TGG | + | chr1_3:73541891-73541910 | Msa0139700:intron | 45.0% |
CAACATGCATGACACTGTGA+TGG | - | chr1_3:73542348-73542367 | None:intergenic | 45.0% | |
! | CCGCTTTCTTCTTCTGGAAA+TGG | + | chr1_3:73542524-73542543 | Msa0139700:intron | 45.0% |
AGACAAACGAAGTTCGTTGC+CGG | - | chr1_3:73542730-73542749 | None:intergenic | 45.0% | |
!! | ACGAAAGAGCACTATTGGTG+TGG | + | chr1_3:73542865-73542884 | Msa0139700:intron | 45.0% |
! | TGAAATGCTGAAGCGTCTAC+AGG | + | chr1_3:73543038-73543057 | Msa0139700:CDS | 45.0% |
! | TGCTGCTTATTACAAAGCGG+AGG | + | chr1_3:73543284-73543303 | Msa0139700:CDS | 45.0% |
AGGAAGATCGGCACAATATG+TGG | + | chr1_3:73543304-73543323 | Msa0139700:CDS | 45.0% | |
CGCACACTTGAATGTGGAAT+TGG | - | chr1_3:73543367-73543386 | None:intergenic | 45.0% | |
TTCAGTGCGTATGCACAATG+TGG | + | chr1_3:73543677-73543696 | Msa0139700:intron | 45.0% | |
TCAGTGCGTATGCACAATGT+GGG | + | chr1_3:73543678-73543697 | Msa0139700:intron | 45.0% | |
!! | AAGATGAGAGGGTTGACTTG+AGG | - | chr1_3:73543707-73543726 | None:intergenic | 45.0% |
TCAACCCTCTCATCTTTCTG+TGG | + | chr1_3:73543711-73543730 | Msa0139700:intron | 45.0% | |
GAGTACCACAGAAAGATGAG+AGG | - | chr1_3:73543719-73543738 | None:intergenic | 45.0% | |
AGGTATTTCCAGGGTTCACA+TGG | + | chr1_3:73543971-73543990 | Msa0139700:intron | 45.0% | |
GGTATTTCCAGGGTTCACAT+GGG | + | chr1_3:73543972-73543991 | Msa0139700:intron | 45.0% | |
TGGAACGAGTTCTTAACTCG+TGG | + | chr1_3:73544287-73544306 | Msa0139700:CDS | 45.0% | |
!! | CAACAGTCCAGGAAGTATTC+TGG | - | chr1_3:73544328-73544347 | None:intergenic | 45.0% |
ATAGACTAAGGCAACAGTCC+AGG | - | chr1_3:73544339-73544358 | None:intergenic | 45.0% | |
TGGACTGTTGCCTTAGTCTA+TGG | + | chr1_3:73544338-73544357 | Msa0139700:CDS | 45.0% | |
!!! | GAAATATTTTTTTTTTTTTA+TGG | + | chr1_3:73541590-73541609 | Msa0139700:intron | 5.0% |
!!! | TATTATTATTATTTTTCAAA+CGG | - | chr1_3:73543197-73543216 | None:intergenic | 5.0% |
! | AGTGCTGCTGGTGTTGAAGT+TGG | + | chr1_3:73541245-73541264 | Msa0139700:CDS | 50.0% |
ATCCATCCAGGTTACCTGCT+TGG | + | chr1_3:73541745-73541764 | Msa0139700:intron | 50.0% | |
TTCAAGCCAAGCAGGTAACC+TGG | - | chr1_3:73541754-73541773 | None:intergenic | 50.0% | |
ACATTGCGCACTTGCGACAA+GGG | - | chr1_3:73542674-73542693 | None:intergenic | 50.0% | |
! | ATGCTGAAGCGTCTACAGGA+TGG | + | chr1_3:73543042-73543061 | Msa0139700:CDS | 50.0% |
GCGTCTACAGGATGGAAACT+TGG | + | chr1_3:73543050-73543069 | Msa0139700:CDS | 50.0% | |
ATGGAAACTTGGCCACAGGA+GGG | + | chr1_3:73543061-73543080 | Msa0139700:CDS | 50.0% | |
!! | GCTGGTGTTGAAGTTGGTGC+TGG | + | chr1_3:73541251-73541270 | Msa0139700:CDS | 55.0% |
AGCCAAGCAGGTAACCTGGA+TGG | - | chr1_3:73541750-73541769 | None:intergenic | 55.0% | |
CACATTGCGCACTTGCGACA+AGG | - | chr1_3:73542675-73542694 | None:intergenic | 55.0% | |
CAGGATGGAAACTTGGCCAC+AGG | + | chr1_3:73543057-73543076 | Msa0139700:CDS | 55.0% | |
GATGGAAACTTGGCCACAGG+AGG | + | chr1_3:73543060-73543079 | Msa0139700:CDS | 55.0% | |
TCCAGGGTTCACATGGGAGA+CGG | + | chr1_3:73543978-73543997 | Msa0139700:intron | 55.0% | |
! | AAGGTGGGGACAAGTGCTGC+TGG | + | chr1_3:73541233-73541252 | Msa0139700:CDS | 60.0% |
GCGACGTTGCACGTCATGCA+TGG | - | chr1_3:73542646-73542665 | None:intergenic | 60.0% | |
GCCGTCTCCCATGTGAACCC+TGG | - | chr1_3:73543982-73544001 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 73540771 | 73544373 | 73540771 | ID=Msa0139700;Name=Msa0139700 |
chr1_3 | mRNA | 73540771 | 73544373 | 73540771 | ID=Msa0139700-mRNA-1;Parent=Msa0139700;Name=Msa0139700-mRNA-1;_AED=0.14;_eAED=0.14;_QI=421|1|0.8|1|0.75|0.6|5|0|242 |
chr1_3 | exon | 73540771 | 73541101 | 73540771 | ID=Msa0139700-mRNA-1:exon:25602;Parent=Msa0139700-mRNA-1 |
chr1_3 | exon | 73541122 | 73541340 | 73541122 | ID=Msa0139700-mRNA-1:exon:25603;Parent=Msa0139700-mRNA-1 |
chr1_3 | exon | 73542913 | 73543117 | 73542913 | ID=Msa0139700-mRNA-1:exon:25604;Parent=Msa0139700-mRNA-1 |
chr1_3 | exon | 73543254 | 73543419 | 73543254 | ID=Msa0139700-mRNA-1:exon:25605;Parent=Msa0139700-mRNA-1 |
chr1_3 | exon | 73544148 | 73544373 | 73544148 | ID=Msa0139700-mRNA-1:exon:25606;Parent=Msa0139700-mRNA-1 |
chr1_3 | five_prime_UTR | 73540771 | 73541101 | 73540771 | ID=Msa0139700-mRNA-1:five_prime_utr;Parent=Msa0139700-mRNA-1 |
chr1_3 | five_prime_UTR | 73541122 | 73541211 | 73541122 | ID=Msa0139700-mRNA-1:five_prime_utr;Parent=Msa0139700-mRNA-1 |
chr1_3 | CDS | 73541212 | 73541340 | 73541212 | ID=Msa0139700-mRNA-1:cds;Parent=Msa0139700-mRNA-1 |
chr1_3 | CDS | 73542913 | 73543117 | 73542913 | ID=Msa0139700-mRNA-1:cds;Parent=Msa0139700-mRNA-1 |
chr1_3 | CDS | 73543254 | 73543419 | 73543254 | ID=Msa0139700-mRNA-1:cds;Parent=Msa0139700-mRNA-1 |
chr1_3 | CDS | 73544148 | 73544373 | 73544148 | ID=Msa0139700-mRNA-1:cds;Parent=Msa0139700-mRNA-1 |
Gene Sequence |
Protein sequence |